Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 4 cut(s) | 138, 165, 363, 426 |
| AccII | CGCG | 4 cut(s) | 191, 329, 542, 850 |
| AciI | CCGC | 8 cut(s) | 33, 63, 189, 196, 519, 540, 542, 850 |
| AclWI | GGATC | 1 cut(s) | 423 |
| AcoI | YGGCCR | 1 cut(s) | 205 |
| AcsI | RAATTY | 1 cut(s) | 464 |
| AcuI | CTGAAG | 1 cut(s) | 425 |
| AcvI | CACGTG | 1 cut(s) | 215 |
| AcyI | GRCGYC | 1 cut(s) | 774 |
| AdeI | CACNNNGTG | 1 cut(s) | 192 |
| AfaI | GTAC | 6 cut(s) | 203, 253, 286, 523, 724, 751 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 53, 59, 236 |
| AgsI | TTSAA | 5 cut(s) | 70, 107, 352, 611, 668 |
| AjnI | CCWGG | 1 cut(s) | 378 |
| AluBI | AGCT | 4 cut(s) | 129, 403, 457, 797 |
| AluI | AGCT | 4 cut(s) | 129, 403, 457, 797 |
| Alw26I | GTCTC | 1 cut(s) | 694 |
| AlwI | GGATC | 1 cut(s) | 423 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 806 |
| Ama87I | CYCGRG | 2 cut(s) | 99, 768 |
| AoxI | GGCC | 5 cut(s) | 96, 154, 175, 205, 437 |
| ApeKI | GCWGC | 2 cut(s) | 16, 797 |
| ApoI | RAATTY | 1 cut(s) | 464 |
| AspLEI | GCGC | 2 cut(s) | 329, 331 |
| AspS9I | GGNCC | 5 cut(s) | 80, 97, 154, 265, 689 |
| AsuC2I | CCSGG | 6 cut(s) | 54, 100, 101, 148, 237, 260 |
| AsuHPI | GGTGA | 1 cut(s) | 225 |
| AvaI | CYCGRG | 2 cut(s) | 99, 768 |
| AvaII | GGWCC | 3 cut(s) | 80, 265, 689 |
| BaeGI | GKGCMC | 1 cut(s) | 220 |
| BanII | GRGCYC | 1 cut(s) | 33 |
| BbrPI | CACGTG | 1 cut(s) | 215 |
| BbsI | GAAGAC | 1 cut(s) | 413 |
| BbvI | GCAGC | 2 cut(s) | 3, 784 |
| BccI | CCATC | 3 cut(s) | 91, 119, 238 |
| BceAI | ACGGC | 3 cut(s) | 190, 192, 220 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 29 |
| BciT130I | CCWGG | 1 cut(s) | 380 |
| BciVI | GTATCC | 1 cut(s) | 301 |
| BcnI | CCSGG | 6 cut(s) | 54, 100, 101, 148, 237, 260 |
| BcoDI | GTCTC | 1 cut(s) | 694 |
| BfaI | CTAG | 3 cut(s) | 320, 384, 731 |
| BfmI | CTRYAG | 1 cut(s) | 798 |
| BfuI | GTATCC | 1 cut(s) | 301 |
| BisI | GCNGC | 3 cut(s) | 17, 196, 798 |
| BlsI | GCNGC | 3 cut(s) | 18, 197, 799 |
| Bme1390I | CCNGG | 7 cut(s) | 54, 100, 101, 148, 237, 260, 380 |
| Bme18I | GGWCC | 3 cut(s) | 80, 265, 689 |
| BmeT110I | CYCGRG | 2 cut(s) | 99, 768 |
| BmgT120I | GGNCC | 5 cut(s) | 80, 97, 154, 265, 689 |
| BmiI | GGNNCC | 1 cut(s) | 267 |
| BmrFI | CCNGG | 7 cut(s) | 54, 100, 101, 148, 237, 260, 380 |
| BmsI | GCATC | 2 cut(s) | 568, 820 |
| BpiI | GAAGAC | 1 cut(s) | 413 |
| BpuEI | CTTGAG | 2 cut(s) | 164, 718 |
| BpuMI | CCSGG | 6 cut(s) | 54, 100, 101, 148, 237, 260 |
| BsaAI | YACGTR | 1 cut(s) | 215 |
| BsaHI | GRCGYC | 1 cut(s) | 774 |
| BsaJI | CCNNGG | 6 cut(s) | 76, 99, 132, 258, 540, 685 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 53, 59, 236 |
| Bse1I | ACTGG | 1 cut(s) | 309 |
| Bse3DI | GCAATG | 1 cut(s) | 18 |
| BseBI | CCWGG | 1 cut(s) | 380 |
| BseDI | CCNNGG | 6 cut(s) | 76, 99, 132, 258, 540, 685 |
| BseGI | GGATG | 3 cut(s) | 83, 766, 835 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 53, 59, 236 |
| BseMI | GCAATG | 1 cut(s) | 18 |
| BseMII | CTCAG | 3 cut(s) | 272, 307, 621 |
| BseNI | ACTGG | 1 cut(s) | 309 |
| BsePI | GCGCGC | 1 cut(s) | 327 |
| BseSI | GKGCMC | 1 cut(s) | 220 |
| BseX3I | CGGCCG | 1 cut(s) | 205 |
| BseXI | GCAGC | 2 cut(s) | 3, 784 |
| Bsh1236I | CGCG | 4 cut(s) | 191, 329, 542, 850 |
| Bsh1285I | CGRYCG | 2 cut(s) | 53, 208 |
| BshFI | GGCC | 5 cut(s) | 98, 156, 177, 207, 439 |
| BsiEI | CGRYCG | 2 cut(s) | 53, 208 |
| BsiHKCI | CYCGRG | 2 cut(s) | 99, 768 |
| BsiSI | CCGG | 5 cut(s) | 53, 100, 148, 236, 260 |
| BslFI | GGGAC | 3 cut(s) | 251, 603, 785 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 53, 59, 236 |
| BsmAI | GTCTC | 1 cut(s) | 694 |
| BsmFI | GGGAC | 3 cut(s) | 251, 603, 785 |
| BsnI | GGCC | 5 cut(s) | 98, 156, 177, 207, 439 |
| BsoBI | CYCGRG | 2 cut(s) | 99, 768 |
| Bsp1286I | GDGCHC | 2 cut(s) | 33, 220 |
| Bsp1407I | TGTACA | 1 cut(s) | 722 |
| Bsp143I | GATC | 2 cut(s) | 397, 415 |
| Bsp19I | CCATGG | 2 cut(s) | 76, 132 |
| BspACI | CCGC | 8 cut(s) | 33, 63, 189, 196, 519, 540, 542, 850 |
| BspANI | GGCC | 5 cut(s) | 98, 156, 177, 207, 439 |
| BspCNI | CTCAG | 3 cut(s) | 273, 306, 622 |
| BspFNI | CGCG | 4 cut(s) | 191, 329, 542, 850 |
| BspLI | GGNNCC | 1 cut(s) | 267 |
| BspMAI | CTGCAG | 1 cut(s) | 802 |
| BspPI | GGATC | 1 cut(s) | 423 |
| BsrDI | GCAATG | 1 cut(s) | 18 |
| BsrGI | TGTACA | 1 cut(s) | 722 |
| BsrI | ACTGG | 1 cut(s) | 309 |
| BssECI | CCNNGG | 6 cut(s) | 76, 99, 132, 258, 540, 685 |
| BssHII | GCGCGC | 1 cut(s) | 327 |
| BssMI | GATC | 2 cut(s) | 397, 415 |
| BssNAI | GTATAC | 1 cut(s) | 364 |
| BssNI | GRCGYC | 1 cut(s) | 774 |
| BssT1I | CCWWGG | 3 cut(s) | 76, 132, 685 |
| Bst1107I | GTATAC | 1 cut(s) | 364 |
| Bst2UI | CCWGG | 1 cut(s) | 380 |
| Bst4CI | ACNGT | 2 cut(s) | 422, 793 |
| Bst6I | CTCTTC | 1 cut(s) | 606 |
| BstACI | GRCGYC | 1 cut(s) | 774 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 830 |
| BstAUI | TGTACA | 1 cut(s) | 722 |
| BstBAI | YACGTR | 1 cut(s) | 215 |
| BstC8I | GCNNGC | 6 cut(s) | 33, 193, 325, 329, 540, 861 |
| BstDEI | CTNAG | 3 cut(s) | 281, 293, 630 |
| BstDSI | CCRYGG | 3 cut(s) | 76, 132, 540 |
| BstF5I | GGATG | 3 cut(s) | 83, 766, 835 |
| BstFNI | CGCG | 4 cut(s) | 191, 329, 542, 850 |
| BstHHI | GCGC | 2 cut(s) | 329, 331 |
| BstKTI | GATC | 2 cut(s) | 400, 418 |
| BstMAI | GTCTC | 1 cut(s) | 694 |
| BstMBI | GATC | 2 cut(s) | 397, 415 |
| BstMCI | CGRYCG | 2 cut(s) | 53, 208 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 204, 254, 773, 803, 830, 856 |
| BstNI | CCWGG | 1 cut(s) | 380 |
| BstNSI | RCATGY | 2 cut(s) | 327, 863 |
| BstSCI | CCNGG | 7 cut(s) | 52, 98, 99, 146, 235, 258, 378 |
| BstSFI | CTRYAG | 1 cut(s) | 798 |
| BstSLI | GKGCMC | 1 cut(s) | 220 |
| BstUI | CGCG | 4 cut(s) | 191, 329, 542, 850 |
| BstV1I | GCAGC | 2 cut(s) | 3, 784 |
| BstV2I | GAAGAC | 1 cut(s) | 413 |
| BstZ17I | GTATAC | 1 cut(s) | 364 |
| BstZI | CGGCCG | 1 cut(s) | 205 |
| BsuI | GTATCC | 1 cut(s) | 301 |
| BsuRI | GGCC | 5 cut(s) | 98, 156, 177, 207, 439 |
| BtgI | CCRYGG | 3 cut(s) | 76, 132, 540 |
| BtgZI | GCGATG | 2 cut(s) | 97, 210 |
| BtsCI | GGATG | 3 cut(s) | 83, 766, 835 |
| BtsI | GCAGTG | 1 cut(s) | 807 |
| BtsIMutI | CAGTG | 3 cut(s) | 302, 427, 807 |
| Cac8I | GCNNGC | 6 cut(s) | 33, 193, 325, 329, 540, 861 |
| CaiI | CAGNNNCTG | 1 cut(s) | 806 |
| CfoI | GCGC | 2 cut(s) | 329, 331 |
| Cfr13I | GGNCC | 5 cut(s) | 80, 97, 154, 265, 689 |
| Cfr42I | CCGCGG | 1 cut(s) | 543 |
| Cfr9I | CCCGGG | 1 cut(s) | 99 |
| CseI | GACGC | 1 cut(s) | 782 |
| Csp6I | GTAC | 6 cut(s) | 202, 252, 285, 522, 723, 750 |
| CviQI | GTAC | 6 cut(s) | 202, 252, 285, 522, 723, 750 |
| DdeI | CTNAG | 3 cut(s) | 281, 293, 630 |
| DpnI | GATC | 2 cut(s) | 399, 417 |
| DpnII | GATC | 2 cut(s) | 397, 415 |
| DraIII | CACNNNGTG | 1 cut(s) | 192 |
| EaeI | YGGCCR | 1 cut(s) | 205 |
| EagI | CGGCCG | 1 cut(s) | 205 |
| Eam1104I | CTCTTC | 1 cut(s) | 606 |
| EarI | CTCTTC | 1 cut(s) | 606 |
| EciI | GGCGGA | 1 cut(s) | 78 |
| EclXI | CGGCCG | 1 cut(s) | 205 |
| Eco130I | CCWWGG | 3 cut(s) | 76, 132, 685 |
| Eco24I | GRGCYC | 1 cut(s) | 33 |
| Eco47I | GGWCC | 3 cut(s) | 80, 265, 689 |
| Eco52I | CGGCCG | 1 cut(s) | 205 |
| Eco57I | CTGAAG | 1 cut(s) | 425 |
| Eco72I | CACGTG | 1 cut(s) | 215 |
| Eco88I | CYCGRG | 2 cut(s) | 99, 768 |
| EcoRII | CCWGG | 1 cut(s) | 378 |
| EcoT14I | CCWWGG | 3 cut(s) | 76, 132, 685 |
| EcoT22I | ATGCAT | 1 cut(s) | 865 |
| EcoT38I | GRGCYC | 1 cut(s) | 33 |
| ErhI | CCWWGG | 3 cut(s) | 76, 132, 685 |
| FaqI | GGGAC | 3 cut(s) | 251, 603, 785 |
| FauI | CCCGC | 2 cut(s) | 40, 547 |
| FauNDI | CATATG | 1 cut(s) | 373 |
| FblI | GTMKAC | 4 cut(s) | 138, 165, 363, 426 |
| Fnu4HI | GCNGC | 3 cut(s) | 17, 196, 798 |
| FokI | GGATG | 3 cut(s) | 70, 773, 842 |
| FriOI | GRGCYC | 1 cut(s) | 33 |
| Fsp4HI | GCNGC | 3 cut(s) | 17, 196, 798 |
| FspBI | CTAG | 3 cut(s) | 320, 384, 731 |
| GlaI | GCGC | 2 cut(s) | 328, 330 |
| GluI | GCNGC | 3 cut(s) | 17, 196, 798 |
| HaeIII | GGCC | 5 cut(s) | 98, 156, 177, 207, 439 |
| HapII | CCGG | 5 cut(s) | 53, 100, 148, 236, 260 |
| HgaI | GACGC | 1 cut(s) | 782 |
| HhaI | GCGC | 2 cut(s) | 329, 331 |
| Hin1I | GRCGYC | 1 cut(s) | 774 |
| Hin6I | GCGC | 2 cut(s) | 327, 329 |
| HinP1I | GCGC | 2 cut(s) | 327, 329 |
| HincII | GTYRAC | 2 cut(s) | 139, 166 |
| HindII | GTYRAC | 2 cut(s) | 139, 166 |
| HinfI | GANTC | 3 cut(s) | 66, 271, 277 |
| HpaII | CCGG | 5 cut(s) | 53, 100, 148, 236, 260 |
| HphI | GGTGA | 1 cut(s) | 225 |
| Hpy166II | GTNNAC | 6 cut(s) | 139, 166, 212, 252, 364, 427 |
| Hpy188I | TCNGA | 6 cut(s) | 28, 88, 276, 282, 631, 747 |
| Hpy188III | TCNNGA | 4 cut(s) | 181, 268, 588, 770 |
| Hpy8I | GTNNAC | 6 cut(s) | 139, 166, 212, 252, 364, 427 |
| Hpy99I | CGWCG | 1 cut(s) | 167 |
| HpyAV | CCTTC | 2 cut(s) | 145, 346 |
| HpyCH4III | ACNGT | 2 cut(s) | 422, 793 |
| HpyCH4IV | ACGT | 2 cut(s) | 162, 214 |
| HpyCH4V | TGCA | 6 cut(s) | 11, 482, 574, 800, 859, 863 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 204, 254, 773, 803, 830, 856 |
| HpyF3I | CTNAG | 3 cut(s) | 281, 293, 630 |
| HpySE526I | ACGT | 2 cut(s) | 162, 214 |
| Hsp92I | GRCGYC | 1 cut(s) | 774 |
| HspAI | GCGC | 2 cut(s) | 327, 329 |
| KspI | CCGCGG | 1 cut(s) | 543 |
| Kzo9I | GATC | 2 cut(s) | 397, 415 |
| LmnI | GCTCC | 1 cut(s) | 134 |
| Lsp1109I | GCAGC | 2 cut(s) | 3, 784 |
| LweI | GCATC | 2 cut(s) | 568, 820 |
| MaeI | CTAG | 3 cut(s) | 320, 384, 731 |
| MaeII | ACGT | 2 cut(s) | 162, 214 |
| MalI | GATC | 2 cut(s) | 399, 417 |
| MboI | GATC | 2 cut(s) | 397, 415 |
| MboII | GAAGA | 2 cut(s) | 418, 623 |
| MhlI | GDGCHC | 2 cut(s) | 33, 220 |
| MluCI | AATT | 4 cut(s) | 332, 356, 464, 735 |
| MlyI | GAGTC | 1 cut(s) | 271 |
| MnlI | CCTC | 7 cut(s) | 88, 152, 188, 607, 702, 751, 776 |
| Mph1103I | ATGCAT | 1 cut(s) | 865 |
| MseI | TTAA | 3 cut(s) | 459, 512, 840 |
| MslI | CAYNNNNRTG | 1 cut(s) | 512 |
| MspA1I | CMGCKG | 2 cut(s) | 403, 542 |
| MspI | CCGG | 5 cut(s) | 53, 100, 148, 236, 260 |
| MspR9I | CCNGG | 7 cut(s) | 54, 100, 101, 148, 237, 260, 380 |
| MvaI | CCWGG | 1 cut(s) | 380 |
| MvnI | CGCG | 4 cut(s) | 191, 329, 542, 850 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 204, 254, 773, 803, 830, 856 |
| NciI | CCSGG | 6 cut(s) | 54, 100, 101, 148, 237, 260 |
| NcoI | CCATGG | 2 cut(s) | 76, 132 |
| NdeI | CATATG | 1 cut(s) | 373 |
| NdeII | GATC | 2 cut(s) | 397, 415 |
| NlaIV | GGNNCC | 1 cut(s) | 267 |
| NsiI | ATGCAT | 1 cut(s) | 865 |
| NspI | RCATGY | 2 cut(s) | 327, 863 |
| PaeI | GCATGC | 2 cut(s) | 327, 863 |
| PauI | GCGCGC | 1 cut(s) | 327 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 120 |
| PfeI | GAWTC | 2 cut(s) | 66, 271 |
| PflFI | GACNNNGTC | 1 cut(s) | 54 |
| PfoI | TCCNGGA | 1 cut(s) | 146 |
| PkrI | GCNGC | 3 cut(s) | 18, 197, 799 |
| PleI | GAGTC | 1 cut(s) | 271 |
| PmaCI | CACGTG | 1 cut(s) | 215 |
| PmlI | CACGTG | 1 cut(s) | 215 |
| PpsI | GAGTC | 1 cut(s) | 271 |
| Ppu21I | YACGTR | 1 cut(s) | 215 |
| Psp6I | CCWGG | 1 cut(s) | 378 |
| PspCI | CACGTG | 1 cut(s) | 215 |
| PspGI | CCWGG | 1 cut(s) | 378 |
| PspN4I | GGNNCC | 1 cut(s) | 267 |
| PspPI | GGNCC | 5 cut(s) | 80, 97, 154, 265, 689 |
| PstI | CTGCAG | 1 cut(s) | 802 |
| PstNI | CAGNNNCTG | 1 cut(s) | 806 |
| PsyI | GACNNNGTC | 1 cut(s) | 54 |
| PteI | GCGCGC | 1 cut(s) | 327 |
| PvuII | CAGCTG | 1 cut(s) | 403 |
| RsaI | GTAC | 6 cut(s) | 203, 253, 286, 523, 724, 751 |
| RsaNI | GTAC | 6 cut(s) | 202, 252, 285, 522, 723, 750 |
| RseI | CAYNNNNRTG | 1 cut(s) | 512 |
| SacII | CCGCGG | 1 cut(s) | 543 |
| SalI | GTCGAC | 2 cut(s) | 137, 164 |
| SaqAI | TTAA | 3 cut(s) | 459, 512, 840 |
| SatI | GCNGC | 3 cut(s) | 17, 196, 798 |
| Sau3AI | GATC | 2 cut(s) | 397, 415 |
| Sau96I | GGNCC | 5 cut(s) | 80, 97, 154, 265, 689 |
| SchI | GAGTC | 1 cut(s) | 271 |
| ScrFI | CCNGG | 7 cut(s) | 54, 100, 101, 148, 237, 260, 380 |
| SduI | GDGCHC | 2 cut(s) | 33, 220 |
| SfaNI | GCATC | 2 cut(s) | 568, 820 |
| SfcI | CTRYAG | 1 cut(s) | 798 |
| Sfr303I | CCGCGG | 1 cut(s) | 543 |
| SgrBI | CCGCGG | 1 cut(s) | 543 |
| SinI | GGWCC | 3 cut(s) | 80, 265, 689 |
| SmaI | CCCGGG | 1 cut(s) | 101 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 512 |
| SmlI | CTYRAG | 2 cut(s) | 179, 697 |
| SmoI | CTYRAG | 2 cut(s) | 179, 697 |
| SphI | GCATGC | 2 cut(s) | 327, 863 |
| Sse9I | AATT | 4 cut(s) | 332, 356, 464, 735 |
| SsiI | CCGC | 8 cut(s) | 33, 63, 189, 196, 519, 540, 542, 850 |
| SspI | AATATT | 1 cut(s) | 243 |
| SspMI | CTAG | 3 cut(s) | 320, 384, 731 |
| StyD4I | CCNGG | 7 cut(s) | 52, 98, 99, 146, 235, 258, 378 |
| StyI | CCWWGG | 3 cut(s) | 76, 132, 685 |
| TaaI | ACNGT | 2 cut(s) | 422, 793 |
| TaiI | ACGT | 2 cut(s) | 165, 217 |
| TaqI | TCGA | 2 cut(s) | 138, 165 |
| TasI | AATT | 4 cut(s) | 332, 356, 464, 735 |
| TatI | WGTACW | 4 cut(s) | 251, 284, 722, 749 |
| TauI | GCSGC | 1 cut(s) | 198 |
| TfiI | GAWTC | 2 cut(s) | 66, 271 |
| Tru1I | TTAA | 3 cut(s) | 459, 512, 840 |
| Tru9I | TTAA | 3 cut(s) | 459, 512, 840 |
| TscAI | CASTG | 3 cut(s) | 309, 427, 807 |
| TseI | GCWGC | 2 cut(s) | 16, 797 |
| TspDTI | ATGAA | 2 cut(s) | 496, 517 |
| TspMI | CCCGGG | 1 cut(s) | 99 |
| TspRI | CASTG | 3 cut(s) | 309, 427, 807 |
| Tth111I | GACNNNGTC | 1 cut(s) | 54 |
| VpaK11BI | GGWCC | 3 cut(s) | 80, 265, 689 |
| XapI | RAATTY | 1 cut(s) | 464 |
| XceI | RCATGY | 2 cut(s) | 327, 863 |
| XmaI | CCCGGG | 1 cut(s) | 99 |
| XmiI | GTMKAC | 4 cut(s) | 138, 165, 363, 426 |
| XspI | CTAG | 3 cut(s) | 320, 384, 731 |
| Zsp2I | ATGCAT | 1 cut(s) | 865 |