Rh7AG116700

Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0001670
Physical Location & Seq
Forward (+)
9121291 .. 9124206
2916 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG116700.1

Sequence Viewer

Length: 1569 bp
ATGGTCGACCTCTCCCGGCGAGGCCAAAACGTCGACCTAAACGCGCTCAAAACCGCCGCTTGCCGCAAGTACGGCCTCGCACGTGCGCCGAAGCTGGTGGAGATGATCGCCGCGCTTCCGGAATCGGACCGCGAGGCTCTGCTCCCGAAGCTGAAAGCCAAGCCGGTCCGAACCGCCTCGGGAATCGCCGTCGTGGCCGTGATGTCGAAGCCTCACCGGTGCCCTCACATCGCCACCACCGGGAATATATGCGTGTACTGTCCCGGTGGGCCCGACTCGGATTTTGAGTATAGTACTCAGTCTTATACTGGATACGAGCCAACTAGCATGCGCGCAATTCGGGCCAGGTACAACCCGTATGTTCAGGCTAGAGGCAGGATAGATCAGCTGAAGCGATTGGGTCATAGTGTAGACAAGGTTGAGTACATCTTAATGGGTGGTACATTCATGTCATTGCCAGCAGATTACCGTGATTACTTTATTAGAAATCTTCATGACGCATTATCTGGCCACACTTCTGCCAATGTTGAAGAGGCAGTCGCCTACTCAGAGCATGGGGCTACTAAATGTATTGGGATGACCATTGAAACGAGGCCAGATTACTGCCTTGGACCTCACTTGAGACAAATGCTTACTTATGGTTGTACACGGTTGGAGATTGGAGTTCAGAGTACATATGAAGATGTGGCTCGTGACACTAATAGAGGTCATACGGTAGCTGCAGTGGCTGATTGTTTCTGCTTGGCAAAGGATGCTGGTTTCAAGGTTGTTGCACACATGATGCCTGATCTCCCAAATGTAGGGGTTGAGAGAGACATGGAAAGTTTTCGGGAGTTTTTCGAGAGCCCCCTGTTCAGAGCAGATGGACTTAAAATTTATCCAACACTTGTAATCCGTGGGACTGGACTTTATGAGCTCTGGAAAACTGGAAGGTATAGAAATTACCCACCCGAGCAACTTGTGGACATTGTAGCCAGGATCCTGGCCATGGTGCCCCCTTGGACACGTGTTTATAGAGTTCAGCGGGACATTCCAATGCCTCTAGTTACTTCTGGGGTGGAGAAAGGGAATCTTCGGGAGCTAGCTTTAGCTCGGATGGAAGACTTGGGCTTAAAGTGTCGTGATGTTCGAACACGAGAAGCTGGAATTCAGGACATACATCACCAAATTAAGCCGGATGAAGTGGAACTCGTTCGTCGTGATTATACAGCAAATGAAGGTTGGGAAACATTTCTTTCATATGAAGATACACGCCAGGATATTCTAGTTGGGTTGTTGCGATTAAGAAAATGTGGCAAAAACACTACCTCTCCTGAACTTATGGGGAAGTGTTCTATTGTTCGTGAACTCCATGTTTATGGAACTGCTGTTCCAGTTCATGGGCGGGATGCTGGCAAGCTGCAACACCAGGGCTATGGTACCCTGTTGATGGAAGAAGCCGAGCGAATTGCTACAAGGGAGCACAGATCAACAAAAATTGCTGTTATTTCAGGAGTAGGAACTCGTCACTACTATAGAAAATTAGGATATGAACTTGAAGGACCTTACATGGTTAAACATCTTGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0002097 GO:0002098 GO:0003674 GO:0003824 GO:0004402 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005719 GO:0005737 GO:0005829 GO:0006139 GO:0006325 GO:0006355 GO:0006357 GO:0006396 GO:0006399 GO:0006400 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008033 GO:0008080 GO:0008150 GO:0008152 GO:0008283 GO:0009292 GO:0009294 GO:0009451 GO:0009653 GO:0009798 GO:0009889 GO:0009966 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010646 GO:0010928 GO:0016043 GO:0016070 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0022603 GO:0023051 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033588 GO:0034212 GO:0034470 GO:0034641 GO:0034660 GO:0035265 GO:0036211 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044764 GO:0046483 GO:0048583 GO:0048589 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0051276 GO:0051704 GO:0060255 GO:0061733 GO:0065001 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090708 GO:0099402 GO:1900618 GO:1901360 GO:1901371 GO:1901564 GO:1903506 GO:1905392 GO:1905421 GO:1905428 GO:2000024 GO:2000025 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Radical_SAM Radical_SAM_C

Protein Analysis

522

Amino Acids

58.79

Weight (kDa)

8.75

Isoelectric Point (pI)

29.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELP3_N PF23613 2 - 59 1.2e-21 ELP3 N-terminal domain
Radical_SAM PF04055 83 - 269 1.7e-11 Radical SAM superfamily
Radical_SAM_C PF16199 288 - 367 8.8e-23 Radical_SAM C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1418
AccB1I GGYRCC 3 cut(s) 219, 991, 1418
AccB7I CCANNNNNTGG 1 cut(s) 1379
AccI GTMKAC 3 cut(s) 6, 33, 411
AccII CGCG 4 cut(s) 44, 113, 132, 333
AccIII TCCGGA 1 cut(s) 118
AciI CCGC 8 cut(s) 54, 57, 64, 111, 130, 174, 1024, 1384
AclWI GGATC 2 cut(s) 973, 986
AcoI YGGCCR 3 cut(s) 195, 508, 984
AcsI RAATTY 2 cut(s) 873, 1146
AcuI CTGAAG 1 cut(s) 410
AcvI CACGTG 2 cut(s) 83, 1007
AfaI GTAC 9 cut(s) 71, 257, 295, 350, 425, 442, 646, 673, 1420
AfiI CCNNNNNNNGG 5 cut(s) 240, 800, 988, 1379, 1429
AflIII ACRYGT 2 cut(s) 1004, 1006
AgeI ACCGGT 1 cut(s) 216
AgsI TTSAA 4 cut(s) 530, 587, 763, 1538
AjnI CCWGG 5 cut(s) 344, 974, 981, 1254, 1407
AloI GAACNNNNNNTCC 4 cut(s) 1353, 1354, 1385, 1386
Alw21I GWGCWC 2 cut(s) 918, 1464
Alw26I GTCTC 2 cut(s) 616, 807
AlwI GGATC 2 cut(s) 973, 986
AlwNI CAGNNNCTG 1 cut(s) 728
Ama87I CYCGRG 2 cut(s) 178, 950
Aor13HI TCCGGA 1 cut(s) 118
AoxI GGCC 8 cut(s) 22, 73, 195, 269, 342, 508, 593, 984
ApaI GGGCCC 1 cut(s) 273
ApeKI GCWGC 2 cut(s) 719, 1399
ApoI RAATTY 2 cut(s) 873, 1146
ArsI GACNNNNNNTTYG 2 cut(s) 266, 298
AsiGI ACCGGT 1 cut(s) 216
Asp700I GAANNNNTTC 3 cut(s) 825, 1191, 1230
Asp718I GGTACC 1 cut(s) 1418
AspLEI GCGC 5 cut(s) 46, 88, 115, 333, 335
AspS9I GGNCC 7 cut(s) 127, 166, 269, 270, 342, 611, 1541
AsuC2I CCSGG 3 cut(s) 16, 241, 264
AsuHPI GGTGA 2 cut(s) 206, 1154
AsuII TTCGAA 1 cut(s) 1129
AsuNHI GCTAGC 1 cut(s) 1081
AvaI CYCGRG 2 cut(s) 178, 950
AvaII GGWCC 4 cut(s) 127, 166, 611, 1541
BaeGI GKGCMC 3 cut(s) 224, 273, 996
BalI TGGCCA 2 cut(s) 510, 986
BamHI GGATCC 1 cut(s) 978
BanI GGYRCC 3 cut(s) 219, 991, 1418
BanII GRGCYC 3 cut(s) 273, 848, 918
BauI CACGAG 2 cut(s) 690, 1134
BbrPI CACGTG 2 cut(s) 83, 1007
BbsI GAAGAC 1 cut(s) 1107
Bbv12I GWGCWC 2 cut(s) 918, 1464
BbvI GCAGC 2 cut(s) 706, 1386
BccI CCATC 3 cut(s) 857, 1090, 1423
BceAI ACGGC 3 cut(s) 88, 173, 182
BcgI CGANNNNNNTGC 2 cut(s) 1430, 1464
BciT130I CCWGG 5 cut(s) 346, 976, 983, 1256, 1409
BciVI GTATCC 1 cut(s) 305
BcnI CCSGG 3 cut(s) 16, 241, 264
BcoDI GTCTC 2 cut(s) 616, 807
BfaI CTAG 5 cut(s) 324, 369, 1043, 1082, 1265
BfmI CTRYAG 2 cut(s) 720, 1513
BfuI GTATCC 1 cut(s) 305
BglI GCCNNNNNGGC 1 cut(s) 194
BisI GCNGC 5 cut(s) 57, 64, 111, 720, 1400
BlsI GCNGC 5 cut(s) 58, 65, 112, 721, 1401
BmcAI AGTACT 1 cut(s) 295
Bme1390I CCNGG 8 cut(s) 16, 241, 264, 346, 976, 983, 1256, 1409
Bme18I GGWCC 4 cut(s) 127, 166, 611, 1541
BmeT110I CYCGRG 2 cut(s) 178, 950
BmgT120I GGNCC 7 cut(s) 127, 166, 269, 270, 342, 611, 1541
BmiI GGNNCC 5 cut(s) 221, 271, 980, 993, 1420
BmrFI CCNGG 8 cut(s) 16, 241, 264, 346, 976, 983, 1256, 1409
BmsI GCATC 3 cut(s) 742, 771, 1378
BmtI GCTAGC 1 cut(s) 1085
BpiI GAAGAC 1 cut(s) 1107
Bpu14I TTCGAA 1 cut(s) 1129
BpuEI CTTGAG 1 cut(s) 640
BpuMI CCSGG 3 cut(s) 16, 241, 264
BsaAI YACGTR 2 cut(s) 83, 1007
BsaJI CCNNGG 6 cut(s) 177, 607, 895, 987, 998, 1408
BsaWI WCCGGW 2 cut(s) 118, 216
BsaXI ACNNNNNCTCC 2 cut(s) 1294, 1324
Bsc4I CCNNNNNNNGG 5 cut(s) 240, 800, 988, 1379, 1429
Bse118I RCCGGY 2 cut(s) 163, 216
Bse1I ACTGG 4 cut(s) 313, 907, 931, 1373
Bse3DI GCAATG 1 cut(s) 452
BseAI TCCGGA 1 cut(s) 118
BseBI CCWGG 5 cut(s) 346, 976, 983, 1256, 1409
BseDI CCNNGG 6 cut(s) 177, 607, 895, 987, 998, 1408
BseGI GGATG 5 cut(s) 582, 757, 1101, 1183, 1393
BseLI CCNNNNNNNGG 5 cut(s) 240, 800, 988, 1379, 1429
BseMI GCAATG 1 cut(s) 452
BseMII CTCAG 2 cut(s) 311, 561
BseNI ACTGG 4 cut(s) 313, 907, 931, 1373
BsePI GCGCGC 1 cut(s) 331
BseSI GKGCMC 3 cut(s) 224, 273, 996
BseXI GCAGC 2 cut(s) 706, 1386
Bsh1236I CGCG 4 cut(s) 44, 113, 132, 333
BshFI GGCC 8 cut(s) 24, 75, 197, 271, 344, 510, 595, 986
BshNI GGYRCC 3 cut(s) 219, 991, 1418
BshTI ACCGGT 1 cut(s) 216
BsiHKAI GWGCWC 2 cut(s) 918, 1464
BsiHKCI CYCGRG 2 cut(s) 178, 950
BsiSI CCGG 7 cut(s) 16, 119, 164, 217, 240, 264, 1175
BslFI GGGAC 3 cut(s) 246, 913, 1040
BslI CCNNNNNNNGG 5 cut(s) 240, 800, 988, 1379, 1429
BsmAI GTCTC 2 cut(s) 616, 807
BsmFI GGGAC 3 cut(s) 246, 913, 1040
BsnI GGCC 8 cut(s) 24, 75, 197, 271, 344, 510, 595, 986
BsoBI CYCGRG 2 cut(s) 178, 950
Bsp119I TTCGAA 1 cut(s) 1129
Bsp120I GGGCCC 1 cut(s) 269
Bsp1286I GDGCHC 6 cut(s) 224, 273, 848, 918, 996, 1464
Bsp13I TCCGGA 1 cut(s) 118
Bsp1407I TGTACA 1 cut(s) 644
Bsp143I GATC 5 cut(s) 105, 382, 787, 978, 1466
Bsp19I CCATGG 1 cut(s) 987
BspACI CCGC 8 cut(s) 54, 57, 64, 111, 130, 174, 1024, 1384
BspANI GGCC 8 cut(s) 24, 75, 197, 271, 344, 510, 595, 986
BspCNI CTCAG 2 cut(s) 310, 560
BspEI TCCGGA 1 cut(s) 118
BspFNI CGCG 4 cut(s) 44, 113, 132, 333
BspHI TCATGA 1 cut(s) 493
BspLI GGNNCC 5 cut(s) 221, 271, 980, 993, 1420
BspMAI CTGCAG 1 cut(s) 724
BspOI GCTAGC 1 cut(s) 1085
BspPI GGATC 2 cut(s) 973, 986
BspT104I TTCGAA 1 cut(s) 1129
BspT107I GGYRCC 3 cut(s) 219, 991, 1418
BsrDI GCAATG 1 cut(s) 452
BsrFI RCCGGY 2 cut(s) 163, 216
BsrGI TGTACA 1 cut(s) 644
BsrI ACTGG 4 cut(s) 313, 907, 931, 1373
BssAI RCCGGY 2 cut(s) 163, 216
BssECI CCNNGG 6 cut(s) 177, 607, 895, 987, 998, 1408
BssHII GCGCGC 1 cut(s) 331
BssMI GATC 5 cut(s) 105, 382, 787, 978, 1466
BssSI CACGAG 2 cut(s) 690, 1134
BssT1I CCWWGG 3 cut(s) 607, 987, 998
Bst2BI CACGAG 2 cut(s) 690, 1134
Bst2UI CCWGG 5 cut(s) 346, 976, 983, 1256, 1409
Bst4CI ACNGT 4 cut(s) 260, 470, 651, 715
Bst6I CTCTTC 1 cut(s) 525
BstAPI GCANNNNNTGC 1 cut(s) 752
BstAUI TGTACA 1 cut(s) 644
BstBAI YACGTR 2 cut(s) 83, 1007
BstBI TTCGAA 1 cut(s) 1129
BstC8I GCNNGC 7 cut(s) 61, 329, 333, 459, 1083, 1393, 1397
BstDEI CTNAG 2 cut(s) 297, 547
BstDSI CCRYGG 2 cut(s) 895, 987
BstF5I GGATG 5 cut(s) 582, 757, 1101, 1183, 1393
BstFNI CGCG 4 cut(s) 44, 113, 132, 333
BstHHI GCGC 5 cut(s) 46, 88, 115, 333, 335
BstKTI GATC 5 cut(s) 108, 385, 790, 981, 1469
BstMAI GTCTC 2 cut(s) 616, 807
BstMBI GATC 5 cut(s) 105, 382, 787, 978, 1466
BstMWI GCNNNNNNNGC 6 cut(s) 72, 148, 194, 341, 725, 752
BstNI CCWGG 5 cut(s) 346, 976, 983, 1256, 1409
BstNSI RCATGY 1 cut(s) 331
BstSCI CCNGG 8 cut(s) 14, 239, 262, 344, 974, 981, 1254, 1407
BstSFI CTRYAG 2 cut(s) 720, 1513
BstSLI GKGCMC 3 cut(s) 224, 273, 996
BstUI CGCG 4 cut(s) 44, 113, 132, 333
BstV1I GCAGC 2 cut(s) 706, 1386
BstV2I GAAGAC 1 cut(s) 1107
BstX2I RGATCY 1 cut(s) 978
BstXI CCANNNNNNTGG 3 cut(s) 982, 1358, 1415
BstYI RGATCY 1 cut(s) 978
BsuI GTATCC 1 cut(s) 305
BsuRI GGCC 8 cut(s) 24, 75, 197, 271, 344, 510, 595, 986
BtgI CCRYGG 2 cut(s) 895, 987
BtgZI GCGATG 1 cut(s) 214
BtsCI GGATG 5 cut(s) 582, 757, 1101, 1183, 1393
BtsI GCAGTG 1 cut(s) 729
BtsIMutI CAGTG 1 cut(s) 729
Cac8I GCNNGC 7 cut(s) 61, 329, 333, 459, 1083, 1393, 1397
CaiI CAGNNNCTG 1 cut(s) 728
CciI TCATGA 1 cut(s) 493
CfoI GCGC 5 cut(s) 46, 88, 115, 333, 335
Cfr10I RCCGGY 2 cut(s) 163, 216
Cfr13I GGNCC 7 cut(s) 127, 166, 269, 270, 342, 611, 1541
CpoI CGGWCCG 2 cut(s) 127, 166
CseI GACGC 1 cut(s) 506
Csp6I GTAC 9 cut(s) 70, 256, 294, 349, 424, 441, 645, 672, 1419
CspAI ACCGGT 1 cut(s) 216
CspI CGGWCCG 2 cut(s) 127, 166
CviQI GTAC 9 cut(s) 70, 256, 294, 349, 424, 441, 645, 672, 1419
DdeI CTNAG 2 cut(s) 297, 547
DpnI GATC 5 cut(s) 107, 384, 789, 980, 1468
DpnII GATC 5 cut(s) 105, 382, 787, 978, 1466
EaeI YGGCCR 3 cut(s) 195, 508, 984
Eam1104I CTCTTC 1 cut(s) 525
EarI CTCTTC 1 cut(s) 525
Ecl136II GAGCTC 1 cut(s) 916
Eco130I CCWWGG 3 cut(s) 607, 987, 998
Eco24I GRGCYC 3 cut(s) 273, 848, 918
Eco47I GGWCC 4 cut(s) 127, 166, 611, 1541
Eco53kI GAGCTC 1 cut(s) 916
Eco57I CTGAAG 1 cut(s) 410
Eco72I CACGTG 2 cut(s) 83, 1007
Eco88I CYCGRG 2 cut(s) 178, 950
EcoICRI GAGCTC 1 cut(s) 916
EcoO109I RGGNCCY 1 cut(s) 1541
EcoRI GAATTC 1 cut(s) 1146
EcoRII CCWGG 5 cut(s) 344, 974, 981, 1254, 1407
EcoT14I CCWWGG 3 cut(s) 607, 987, 998
EcoT38I GRGCYC 3 cut(s) 273, 848, 918
ErhI CCWWGG 3 cut(s) 607, 987, 998
FalI AAGNNNNNCTT 2 cut(s) 1056, 1088
FaqI GGGAC 3 cut(s) 246, 913, 1040
FauI CCCGC 2 cut(s) 1017, 1377
FauNDI CATATG 2 cut(s) 676, 1240
FblI GTMKAC 3 cut(s) 6, 33, 411
Fnu4HI GCNGC 5 cut(s) 57, 64, 111, 720, 1400
FokI GGATG 5 cut(s) 589, 764, 1108, 1190, 1400
FriOI GRGCYC 3 cut(s) 273, 848, 918
Fsp4HI GCNGC 5 cut(s) 57, 64, 111, 720, 1400
FspBI CTAG 5 cut(s) 324, 369, 1043, 1082, 1265
GlaI GCGC 5 cut(s) 45, 87, 114, 332, 334
GluI GCNGC 5 cut(s) 57, 64, 111, 720, 1400
HaeIII GGCC 8 cut(s) 24, 75, 197, 271, 344, 510, 595, 986
HapII CCGG 7 cut(s) 16, 119, 164, 217, 240, 264, 1175
HgaI GACGC 1 cut(s) 506
HhaI GCGC 5 cut(s) 46, 88, 115, 333, 335
Hin6I GCGC 5 cut(s) 44, 86, 113, 331, 333
HinP1I GCGC 5 cut(s) 44, 86, 113, 331, 333
HincII GTYRAC 2 cut(s) 7, 34
HindII GTYRAC 2 cut(s) 7, 34
HinfI GANTC 4 cut(s) 122, 183, 275, 1069
HpaII CCGG 7 cut(s) 16, 119, 164, 217, 240, 264, 1175
HphI GGTGA 2 cut(s) 206, 1154
Hpy166II GTNNAC 7 cut(s) 7, 34, 256, 412, 647, 964, 1346
Hpy188I TCNGA 7 cut(s) 127, 170, 280, 550, 669, 857, 1095
Hpy8I GTNNAC 7 cut(s) 7, 34, 256, 412, 647, 964, 1346
Hpy99I CGWCG 3 cut(s) 35, 194, 1200
HpyAV CCTTC 3 cut(s) 924, 1211, 1532
HpyCH4III ACNGT 4 cut(s) 260, 470, 651, 715
HpyCH4IV ACGT 3 cut(s) 30, 82, 1006
HpyCH4V TGCA 3 cut(s) 722, 773, 1402
HpyF10VI GCNNNNNNNGC 6 cut(s) 72, 148, 194, 341, 725, 752
HpyF3I CTNAG 2 cut(s) 297, 547
HpySE526I ACGT 3 cut(s) 30, 82, 1006
HspAI GCGC 5 cut(s) 44, 86, 113, 331, 333
Kpn2I TCCGGA 1 cut(s) 118
KpnI GGTACC 1 cut(s) 1422
Kzo9I GATC 5 cut(s) 105, 382, 787, 978, 1466
LmnI GCTCC 3 cut(s) 147, 1078, 1459
Lsp1109I GCAGC 2 cut(s) 706, 1386
LweI GCATC 3 cut(s) 742, 771, 1378
MaeI CTAG 5 cut(s) 324, 369, 1043, 1082, 1265
MaeII ACGT 3 cut(s) 30, 82, 1006
MaeIII GTNAC 3 cut(s) 692, 1045, 1505
MalI GATC 5 cut(s) 107, 384, 789, 980, 1468
MboI GATC 5 cut(s) 105, 382, 787, 978, 1466
MboII GAAGA 7 cut(s) 482, 542, 692, 1064, 1112, 1256, 1445
MflI RGATCY 1 cut(s) 978
MhlI GDGCHC 6 cut(s) 224, 273, 848, 918, 996, 1464
MlsI TGGCCA 2 cut(s) 510, 986
MluCI AATT 8 cut(s) 336, 873, 940, 1146, 1167, 1446, 1476, 1520
MluNI TGGCCA 2 cut(s) 510, 986
MlyI GAGTC 1 cut(s) 269
MmeI TCCRAC 2 cut(s) 633, 905
Mox20I TGGCCA 2 cut(s) 510, 986
MroI TCCGGA 1 cut(s) 118
MroXI GAANNNNTTC 3 cut(s) 825, 1191, 1230
MscI TGGCCA 2 cut(s) 510, 986
MseI TTAA 6 cut(s) 431, 870, 1112, 1170, 1283, 1554
MslI CAYNNNNRTG 3 cut(s) 431, 1034, 1356
Msp20I TGGCCA 2 cut(s) 510, 986
MspA1I CMGCKG 2 cut(s) 388, 1024
MspI CCGG 7 cut(s) 16, 119, 164, 217, 240, 264, 1175
MspR9I CCNGG 8 cut(s) 16, 241, 264, 346, 976, 983, 1256, 1409
MvaI CCWGG 5 cut(s) 346, 976, 983, 1256, 1409
MvnI CGCG 4 cut(s) 44, 113, 132, 333
MwoI GCNNNNNNNGC 6 cut(s) 72, 148, 194, 341, 725, 752
NciI CCSGG 3 cut(s) 16, 241, 264
NcoI CCATGG 1 cut(s) 987
NdeI CATATG 2 cut(s) 676, 1240
NdeII GATC 5 cut(s) 105, 382, 787, 978, 1466
NheI GCTAGC 1 cut(s) 1081
NlaIV GGNNCC 5 cut(s) 221, 271, 980, 993, 1420
NmeAIII GCCGAG 1 cut(s) 1465
NmuCI GTSAC 2 cut(s) 692, 1505
NspI RCATGY 1 cut(s) 331
NspV TTCGAA 1 cut(s) 1129
PaeI GCATGC 1 cut(s) 331
PagI TCATGA 1 cut(s) 493
PauI GCGCGC 1 cut(s) 331
PcsI WCGNNNNNNNCGW 1 cut(s) 1126
PdmI GAANNNNTTC 3 cut(s) 825, 1191, 1230
PfeI GAWTC 3 cut(s) 122, 183, 1069
PflMI CCANNNNNTGG 1 cut(s) 1379
PinAI ACCGGT 1 cut(s) 216
PkrI GCNGC 5 cut(s) 58, 65, 112, 721, 1401
PleI GAGTC 1 cut(s) 269
PmaCI CACGTG 2 cut(s) 83, 1007
PmlI CACGTG 2 cut(s) 83, 1007
PpsI GAGTC 1 cut(s) 269
Ppu21I YACGTR 2 cut(s) 83, 1007
PpuMI RGGWCCY 1 cut(s) 1541
Psp124BI GAGCTC 1 cut(s) 918
Psp5II RGGWCCY 1 cut(s) 1541
Psp6I CCWGG 5 cut(s) 344, 974, 981, 1254, 1407
PspCI CACGTG 2 cut(s) 83, 1007
PspGI CCWGG 5 cut(s) 344, 974, 981, 1254, 1407
PspN4I GGNNCC 5 cut(s) 221, 271, 980, 993, 1420
PspOMI GGGCCC 1 cut(s) 269
PspPI GGNCC 7 cut(s) 127, 166, 269, 270, 342, 611, 1541
PspPPI RGGWCCY 1 cut(s) 1541
PstI CTGCAG 1 cut(s) 724
PstNI CAGNNNCTG 1 cut(s) 728
PsuI RGATCY 1 cut(s) 978
PteI GCGCGC 1 cut(s) 331
PvuII CAGCTG 1 cut(s) 388
RsaI GTAC 9 cut(s) 71, 257, 295, 350, 425, 442, 646, 673, 1420
RsaNI GTAC 9 cut(s) 70, 256, 294, 349, 424, 441, 645, 672, 1419
RseI CAYNNNNRTG 3 cut(s) 431, 1034, 1356
Rsr2I CGGWCCG 2 cut(s) 127, 166
RsrII CGGWCCG 2 cut(s) 127, 166
SacI GAGCTC 1 cut(s) 918
SalI GTCGAC 2 cut(s) 5, 32
SaqAI TTAA 6 cut(s) 431, 870, 1112, 1170, 1283, 1554
SatI GCNGC 5 cut(s) 57, 64, 111, 720, 1400
Sau3AI GATC 5 cut(s) 105, 382, 787, 978, 1466
Sau96I GGNCC 7 cut(s) 127, 166, 269, 270, 342, 611, 1541
ScaI AGTACT 1 cut(s) 295
SchI GAGTC 1 cut(s) 269
ScrFI CCNGG 8 cut(s) 16, 241, 264, 346, 976, 983, 1256, 1409
SduI GDGCHC 6 cut(s) 224, 273, 848, 918, 996, 1464
SfaNI GCATC 3 cut(s) 742, 771, 1378
SfcI CTRYAG 2 cut(s) 720, 1513
SfuI TTCGAA 1 cut(s) 1129
SgrAI CRCCGGYG 1 cut(s) 216
SinI GGWCC 4 cut(s) 127, 166, 611, 1541
SmiMI CAYNNNNRTG 3 cut(s) 431, 1034, 1356
SmlI CTYRAG 1 cut(s) 619
SmoI CTYRAG 1 cut(s) 619
SphI GCATGC 1 cut(s) 331
Sse9I AATT 8 cut(s) 336, 873, 940, 1146, 1167, 1446, 1476, 1520
SsiI CCGC 8 cut(s) 54, 57, 64, 111, 130, 174, 1024, 1384
SspMI CTAG 5 cut(s) 324, 369, 1043, 1082, 1265
SstI GAGCTC 1 cut(s) 918
StyD4I CCNGG 8 cut(s) 14, 239, 262, 344, 974, 981, 1254, 1407
StyI CCWWGG 3 cut(s) 607, 987, 998
TaaI ACNGT 4 cut(s) 260, 470, 651, 715
TaiI ACGT 3 cut(s) 33, 85, 1009
TaqI TCGA 5 cut(s) 6, 33, 206, 840, 1129
TasI AATT 8 cut(s) 336, 873, 940, 1146, 1167, 1446, 1476, 1520
TatI WGTACW 5 cut(s) 255, 293, 423, 644, 671
TauI GCSGC 3 cut(s) 59, 66, 113
TfiI GAWTC 3 cut(s) 122, 183, 1069
Tru1I TTAA 6 cut(s) 431, 870, 1112, 1170, 1283, 1554
Tru9I TTAA 6 cut(s) 431, 870, 1112, 1170, 1283, 1554
TscAI CASTG 1 cut(s) 729
TseFI GTSAC 2 cut(s) 692, 1505
TseI GCWGC 2 cut(s) 719, 1399
Tsp45I GTSAC 2 cut(s) 692, 1505
TspDTI ATGAA 9 cut(s) 436, 482, 693, 1194, 1227, 1230, 1257, 1367, 1545
TspGWI ACGGA 1 cut(s) 884
TspRI CASTG 1 cut(s) 729
Van91I CCANNNNNTGG 1 cut(s) 1379
VpaK11BI GGWCC 4 cut(s) 127, 166, 611, 1541
XapI RAATTY 2 cut(s) 873, 1146
XceI RCATGY 1 cut(s) 331
XmiI GTMKAC 3 cut(s) 6, 33, 411
XmnI GAANNNNTTC 3 cut(s) 825, 1191, 1230
XspI CTAG 5 cut(s) 324, 369, 1043, 1082, 1265
ZrmI AGTACT 1 cut(s) 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.