MD14G1163700.v1.1

Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0001670
Physical Location & Seq
Forward (+)
25770292 .. 25774371
4080 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1163700.v1.1.491

Sequence Viewer

Length: 1695 bp
ATGGCGACTGCAGTGCTACCAGTATCCGAGAGAAAGCAACCCCGGCCGGGTCGGGGCGGATTCGAAGCCCATGGACTATCCGAAGAAGAGGCCCGGGTCCGAGCCATAGCCGAAATCGTCAGCTCCATGGTCGACCTCTCCCGGAAAGGCCAAAACGTCGACCTAAACGCCCTCAAGACCACCGCGTGCCGCAAGTACGGCCTCGCACGTGCGCCGAAGCTGGTCGAAATGATCGCGGCTCTGCCCGAGTCCGACCGCGAGGCTCTTCTCCCCAAGCTCCGGGCCAAGCCGGTCCGAACCGCCTCGGGCATCGCCGTCGTGGCCGTGATGTCGAAGCCTCATCGGTGCCCCCACATCGCCACCACCGGGAATATTTGCGTGTACTGCCCCGGTGGTCCCGATTCGGACTTCGAGTACAGCACTCAGTCTTACACTGGATACGAGCCTACCAGCATGCGCGCAATTCGGGCCAGATACAACCCATATGTCCAGGCTAGAAGCAGGATAGATCAGCTGAAGAGATTGGGTCACAGTGTAGACAAGGTTGAGTTCATCCTAATGGGTGGTACGTTCATGTCTTTGCCAGCGGATTACCGTGATTACTTTATTAGGAATCTGCACGACGCGTTATCAGGACACACTTCCGCCAATGTTGAAGAGGCAGTTGCCTACTCTGAGCATGGTGCTACTAAATGTATTGGAATGACCATTGAAACGAGGCCAGATTATTGCCTTGGACCTCACTTGAGACAAATGCTTTCTTATGGTTGTACAAGACTAGAGATTGGTGTGCAGAGTACGTATGAGGATGTGGCTCGTGATACCAATAGAGGTCATACTGTTGCTGCAGTGGCTGATTGCTTTTGCTTGGCAAAGGATGCTGGTTTCAAGGTGGTTGCACACATGATGCCTGATCTTCCAAATGTAGGAGTAGAGAGAGACATGGAGAGTTTTCGGGAGTTTTTTGAGAGCCCCTCATTCCGAGCAGATGGGCTTAAAATTTATCCAACACTTGTAATCCGTGGAACTGGACTTTATGAGCTTTGGAAAACTGGCAGGTACAGAAATTACCCACCTGAGCAACTTGTGGACATTGTAGCAAGGATCCTAGCTATGGTGCCCCCTTGGACACGTGTTTACAGAGTTCAGCGAGACATTCCAATGCCTCTTGTTACTTCTGGGGTTGAGAAAGGAAATCTTCGGGAGTTAGCTTTGGCTCGGATGGAAGACTTGGGCTTGAAGTGCCGTGATGTTCGAACACGAGAGGCTGGAATTCAGGACATACATCACAAAATTAGGCCGGACCAAGTGGAGCTTGTTCGTCGTGATTATACGGCAAATGAAGGATGGGAAACATTTCTTTCATATGAAGATACTCGCCAGGACATTCTTGTCGGGTTACTGCGTTTAAGAAAGTGTGGCCGCAATACTACTTGTCCCGAACTCATGGGGAAGTGCTCTATTGTTCGTGAACTCCATGTTTATGGAACTGCTGTTCCAGTTCACGGGCGGGATTCTGACAAGCTGCAACACCAGGGTTATGGTACCCTTTTGATGGAGGAGGCCGAGCGGATTGCTAGCAGGGAGCATAGGTCGAAAAAGATTGCTGTCATTTCTGGAGTAGGAACTCGTCATTACTATAGGAAATTAGGCTACGAACTCGAAGGACCTTACATGGTGAAACATCTTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0002097 GO:0002098 GO:0003674 GO:0003824 GO:0004402 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005719 GO:0005737 GO:0005829 GO:0006139 GO:0006325 GO:0006355 GO:0006357 GO:0006396 GO:0006399 GO:0006400 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008033 GO:0008080 GO:0008150 GO:0008152 GO:0008283 GO:0009292 GO:0009294 GO:0009451 GO:0009653 GO:0009798 GO:0009889 GO:0009966 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010646 GO:0010928 GO:0016043 GO:0016070 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0022603 GO:0023051 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033588 GO:0034212 GO:0034470 GO:0034641 GO:0034660 GO:0035265 GO:0036211 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044764 GO:0046483 GO:0048583 GO:0048589 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0051276 GO:0051704 GO:0060255 GO:0061733 GO:0065001 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090708 GO:0099402 GO:1900618 GO:1901360 GO:1901371 GO:1901564 GO:1903506 GO:1905392 GO:1905421 GO:1905428 GO:2000024 GO:2000025 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Radical_SAM Radical_SAM_C

Protein Analysis

565

Amino Acids

63.42

Weight (kDa)

8.87

Isoelectric Point (pI)

34.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELP3_N PF23613 33 - 101 2.2e-26 ELP3 N-terminal domain
Radical_SAM PF04055 125 - 311 1.3e-12 Radical SAM superfamily
Radical_SAM_C PF16199 330 - 409 9.8e-23 Radical_SAM C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1391
Acc36I ACCTGC 1 cut(s) 1047
Acc65I GGTACC 1 cut(s) 1544
AccB1I GGYRCC 3 cut(s) 345, 1117, 1544
AccBSI CCGCTC 1 cut(s) 1570
AccI GTMKAC 3 cut(s) 132, 159, 537
AccII CGCG 5 cut(s) 185, 236, 258, 459, 626
AclWI GGATC 2 cut(s) 1099, 1112
AcoI YGGCCR 3 cut(s) 44, 321, 1420
AcsI RAATTY 2 cut(s) 999, 1272
AcuI CTGAAG 1 cut(s) 536
AcvI CACGTG 2 cut(s) 209, 1133
AdeI CACNNNGTG 1 cut(s) 186
AfaI GTAC 8 cut(s) 197, 383, 416, 568, 772, 799, 1061, 1546
AfiI CCNNNNNNNGG 8 cut(s) 47, 53, 279, 366, 926, 1114, 1505, 1555
AflIII ACRYGT 3 cut(s) 624, 1130, 1132
AgsI TTSAA 4 cut(s) 656, 713, 889, 1240
AjnI CCWGG 3 cut(s) 489, 1380, 1533
AloI GAACNNNNNNTCC 4 cut(s) 1479, 1480, 1511, 1512
AluBI AGCT 9 cut(s) 123, 220, 277, 514, 1042, 1112, 1211, 1315, 1525
AluI AGCT 9 cut(s) 123, 220, 277, 514, 1042, 1112, 1211, 1315, 1525
Alw21I GWGCWC 1 cut(s) 1460
Alw26I GTCTC 3 cut(s) 742, 933, 1146
AlwI GGATC 2 cut(s) 1099, 1112
AlwNI CAGNNNCTG 1 cut(s) 854
Ama87I CYCGRG 3 cut(s) 93, 245, 304
ApeKI GCWGC 2 cut(s) 845, 1525
ApoI RAATTY 2 cut(s) 999, 1272
Asp700I GAANNNNTTC 1 cut(s) 1356
Asp718I GGTACC 1 cut(s) 1544
AspLEI GCGC 3 cut(s) 214, 459, 461
AspS9I GGNCC 9 cut(s) 91, 97, 282, 292, 395, 468, 737, 1303, 1667
AsuC2I CCSGG 8 cut(s) 43, 48, 94, 95, 142, 281, 367, 390
AsuHPI GGTGA 1 cut(s) 1690
AsuII TTCGAA 2 cut(s) 63, 1255
AsuNHI GCTAGC 1 cut(s) 1577
AvaI CYCGRG 3 cut(s) 93, 245, 304
AvaII GGWCC 6 cut(s) 97, 292, 395, 737, 1303, 1667
BaeGI GKGCMC 2 cut(s) 350, 1122
BamHI GGATCC 1 cut(s) 1104
BanI GGYRCC 3 cut(s) 345, 1117, 1544
BanII GRGCYC 1 cut(s) 974
BauI CACGAG 2 cut(s) 816, 1260
BbrPI CACGTG 2 cut(s) 209, 1133
BbsI GAAGAC 1 cut(s) 1233
Bbv12I GWGCWC 1 cut(s) 1460
BbvI GCAGC 2 cut(s) 832, 1512
BccI CCATC 4 cut(s) 983, 1216, 1341, 1549
BceAI ACGGC 5 cut(s) 214, 299, 308, 1230, 1350
BcgI CGANNNNNNTGC 5 cut(s) 29, 298, 332, 1556, 1590
BciT130I CCWGG 3 cut(s) 491, 1382, 1535
BciVI GTATCC 2 cut(s) 34, 431
BcnI CCSGG 8 cut(s) 43, 48, 94, 95, 142, 281, 367, 390
BcoDI GTCTC 3 cut(s) 742, 933, 1146
BfaI CTAG 4 cut(s) 495, 779, 1109, 1578
BfmI CTRYAG 3 cut(s) 9, 846, 1639
BfuAI ACCTGC 1 cut(s) 1047
BfuI GTATCC 2 cut(s) 34, 431
BglI GCCNNNNNGGC 1 cut(s) 320
BisI GCNGC 5 cut(s) 190, 237, 846, 1423, 1526
BlsI GCNGC 5 cut(s) 191, 238, 847, 1424, 1527
Bme18I GGWCC 6 cut(s) 97, 292, 395, 737, 1303, 1667
BmeT110I CYCGRG 3 cut(s) 93, 245, 304
BmgT120I GGNCC 9 cut(s) 91, 97, 282, 292, 395, 468, 737, 1303, 1667
BmiI GGNNCC 6 cut(s) 98, 347, 397, 1106, 1119, 1546
BmsI GCATC 3 cut(s) 318, 868, 897
BmtI GCTAGC 1 cut(s) 1581
BpiI GAAGAC 1 cut(s) 1233
BplI GAGNNNNNCTC 2 cut(s) 959, 991
BpmI CTGGAG 1 cut(s) 1638
Bpu10I CCTNAGC 1 cut(s) 1077
Bpu14I TTCGAA 2 cut(s) 63, 1255
BpuEI CTTGAG 2 cut(s) 158, 766
BpuMI CCSGG 8 cut(s) 43, 48, 94, 95, 142, 281, 367, 390
BsaAI YACGTR 3 cut(s) 209, 801, 1133
BsaXI ACNNNNNCTCC 2 cut(s) 1577, 1607
Bsc4I CCNNNNNNNGG 8 cut(s) 47, 53, 279, 366, 926, 1114, 1505, 1555
Bse118I RCCGGY 1 cut(s) 289
Bse1I ACTGG 5 cut(s) 20, 439, 1033, 1057, 1499
BseBI CCWGG 3 cut(s) 491, 1382, 1535
BseGI GGATG 5 cut(s) 552, 814, 883, 1227, 1352
BseLI CCNNNNNNNGG 8 cut(s) 47, 53, 279, 366, 926, 1114, 1505, 1555
BseMII CTCAG 3 cut(s) 437, 666, 1068
BseNI ACTGG 5 cut(s) 20, 439, 1033, 1057, 1499
BsePI GCGCGC 1 cut(s) 457
BseRI GAGGAG 1 cut(s) 1574
BseSI GKGCMC 2 cut(s) 350, 1122
BseX3I CGGCCG 1 cut(s) 44
BseXI GCAGC 2 cut(s) 832, 1512
BsgI GTGCAG 2 cut(s) 602, 812
Bsh1236I CGCG 5 cut(s) 185, 236, 258, 459, 626
Bsh1285I CGRYCG 2 cut(s) 47, 256
BshNI GGYRCC 3 cut(s) 345, 1117, 1544
BsiEI CGRYCG 2 cut(s) 47, 256
BsiHKAI GWGCWC 1 cut(s) 1460
BsiHKCI CYCGRG 3 cut(s) 93, 245, 304
BsiSI CCGG 9 cut(s) 43, 47, 94, 142, 280, 290, 366, 390, 1301
BslFI GGGAC 2 cut(s) 381, 1422
BslI CCNNNNNNNGG 8 cut(s) 47, 53, 279, 366, 926, 1114, 1505, 1555
BsmAI GTCTC 3 cut(s) 742, 933, 1146
BsmFI GGGAC 2 cut(s) 381, 1422
BsoBI CYCGRG 3 cut(s) 93, 245, 304
Bsp119I TTCGAA 2 cut(s) 63, 1255
Bsp1286I GDGCHC 4 cut(s) 350, 974, 1122, 1460
Bsp1407I TGTACA 1 cut(s) 770
Bsp143I GATC 4 cut(s) 231, 508, 913, 1104
Bsp19I CCATGG 2 cut(s) 70, 126
BspCNI CTCAG 3 cut(s) 436, 667, 1069
BspFNI CGCG 5 cut(s) 185, 236, 258, 459, 626
BspLI GGNNCC 6 cut(s) 98, 347, 397, 1106, 1119, 1546
BspMAI CTGCAG 2 cut(s) 13, 850
BspMI ACCTGC 1 cut(s) 1047
BspOI GCTAGC 1 cut(s) 1581
BspPI GGATC 2 cut(s) 1099, 1112
BspQI GCTCTTC 1 cut(s) 270
BspT104I TTCGAA 2 cut(s) 63, 1255
BspT107I GGYRCC 3 cut(s) 345, 1117, 1544
BsrBI CCGCTC 1 cut(s) 1570
BsrFI RCCGGY 1 cut(s) 289
BsrGI TGTACA 1 cut(s) 770
BsrI ACTGG 5 cut(s) 20, 439, 1033, 1057, 1499
BssAI RCCGGY 1 cut(s) 289
BssHII GCGCGC 1 cut(s) 457
BssMI GATC 4 cut(s) 231, 508, 913, 1104
BssSI CACGAG 2 cut(s) 816, 1260
BssT1I CCWWGG 4 cut(s) 70, 126, 733, 1124
Bst2BI CACGAG 2 cut(s) 816, 1260
Bst2UI CCWGG 3 cut(s) 491, 1382, 1535
Bst4CI ACNGT 3 cut(s) 533, 596, 841
Bst6I CTCTTC 4 cut(s) 81, 270, 512, 651
BstAPI GCANNNNNTGC 1 cut(s) 878
BstAUI TGTACA 1 cut(s) 770
BstBAI YACGTR 3 cut(s) 209, 801, 1133
BstBI TTCGAA 2 cut(s) 63, 1255
BstC8I GCNNGC 5 cut(s) 187, 455, 459, 585, 1579
BstDEI CTNAG 3 cut(s) 423, 675, 1077
BstDSI CCRYGG 3 cut(s) 70, 126, 1021
BstF5I GGATG 5 cut(s) 552, 814, 883, 1227, 1352
BstFNI CGCG 5 cut(s) 185, 236, 258, 459, 626
BstHHI GCGC 3 cut(s) 214, 459, 461
BstKTI GATC 4 cut(s) 234, 511, 916, 1107
BstMAI GTCTC 3 cut(s) 742, 933, 1146
BstMBI GATC 4 cut(s) 231, 508, 913, 1104
BstMCI CGRYCG 2 cut(s) 47, 256
BstMWI GCNNNNNNNGC 8 cut(s) 43, 198, 320, 384, 467, 851, 878, 1242
BstNI CCWGG 3 cut(s) 491, 1382, 1535
BstNSI RCATGY 1 cut(s) 457
BstSFI CTRYAG 3 cut(s) 9, 846, 1639
BstSLI GKGCMC 2 cut(s) 350, 1122
BstSNI TACGTA 1 cut(s) 801
BstUI CGCG 5 cut(s) 185, 236, 258, 459, 626
BstV1I GCAGC 2 cut(s) 832, 1512
BstV2I GAAGAC 1 cut(s) 1233
BstX2I RGATCY 1 cut(s) 1104
BstXI CCANNNNNNTGG 2 cut(s) 1484, 1541
BstYI RGATCY 1 cut(s) 1104
BstZI CGGCCG 1 cut(s) 44
BsuI GTATCC 2 cut(s) 34, 431
BtgI CCRYGG 3 cut(s) 70, 126, 1021
BtgZI GCGATG 2 cut(s) 295, 340
BtsCI GGATG 5 cut(s) 552, 814, 883, 1227, 1352
BtsI GCAGTG 2 cut(s) 18, 855
BtsIMutI CAGTG 4 cut(s) 18, 432, 538, 855
BveI ACCTGC 1 cut(s) 1047
Cac8I GCNNGC 5 cut(s) 187, 455, 459, 585, 1579
CaiI CAGNNNCTG 1 cut(s) 854
CfoI GCGC 3 cut(s) 214, 459, 461
Cfr10I RCCGGY 1 cut(s) 289
Cfr13I GGNCC 9 cut(s) 91, 97, 282, 292, 395, 468, 737, 1303, 1667
Cfr9I CCCGGG 1 cut(s) 93
CpoI CGGWCCG 1 cut(s) 292
CseI GACGC 1 cut(s) 632
Csp6I GTAC 8 cut(s) 196, 382, 415, 567, 771, 798, 1060, 1545
CspI CGGWCCG 1 cut(s) 292
CviQI GTAC 8 cut(s) 196, 382, 415, 567, 771, 798, 1060, 1545
DdeI CTNAG 3 cut(s) 423, 675, 1077
DpnI GATC 4 cut(s) 233, 510, 915, 1106
DpnII GATC 4 cut(s) 231, 508, 913, 1104
DraIII CACNNNGTG 1 cut(s) 186
DrdI GACNNNNNNGTC 1 cut(s) 1391
DseDI GACNNNNNNGTC 1 cut(s) 1391
EaeI YGGCCR 3 cut(s) 44, 321, 1420
EagI CGGCCG 1 cut(s) 44
Eam1104I CTCTTC 4 cut(s) 81, 270, 512, 651
EarI CTCTTC 4 cut(s) 81, 270, 512, 651
EciI GGCGGA 2 cut(s) 72, 634
EclXI CGGCCG 1 cut(s) 44
Eco105I TACGTA 1 cut(s) 801
Eco130I CCWWGG 4 cut(s) 70, 126, 733, 1124
Eco24I GRGCYC 1 cut(s) 974
Eco47I GGWCC 6 cut(s) 97, 292, 395, 737, 1303, 1667
Eco52I CGGCCG 1 cut(s) 44
Eco57I CTGAAG 1 cut(s) 536
Eco72I CACGTG 2 cut(s) 209, 1133
Eco88I CYCGRG 3 cut(s) 93, 245, 304
EcoO109I RGGNCCY 1 cut(s) 1667
EcoRI GAATTC 1 cut(s) 1272
EcoRII CCWGG 3 cut(s) 489, 1380, 1533
EcoT14I CCWWGG 4 cut(s) 70, 126, 733, 1124
EcoT38I GRGCYC 1 cut(s) 974
ErhI CCWWGG 4 cut(s) 70, 126, 733, 1124
FalI AAGNNNNNCTT 4 cut(s) 1182, 1214, 1299, 1331
FaqI GGGAC 2 cut(s) 381, 1422
FauI CCCGC 1 cut(s) 1503
FauNDI CATATG 2 cut(s) 484, 1366
FblI GTMKAC 3 cut(s) 132, 159, 537
Fnu4HI GCNGC 5 cut(s) 190, 237, 846, 1423, 1526
FokI GGATG 5 cut(s) 539, 821, 890, 1234, 1359
FriOI GRGCYC 1 cut(s) 974
Fsp4HI GCNGC 5 cut(s) 190, 237, 846, 1423, 1526
FspBI CTAG 4 cut(s) 495, 779, 1109, 1578
GlaI GCGC 3 cut(s) 213, 458, 460
GluI GCNGC 5 cut(s) 190, 237, 846, 1423, 1526
GsuI CTGGAG 1 cut(s) 1638
HapII CCGG 9 cut(s) 43, 47, 94, 142, 280, 290, 366, 390, 1301
HgaI GACGC 1 cut(s) 632
HhaI GCGC 3 cut(s) 214, 459, 461
Hin6I GCGC 3 cut(s) 212, 457, 459
HinP1I GCGC 3 cut(s) 212, 457, 459
HincII GTYRAC 2 cut(s) 133, 160
HindII GTYRAC 2 cut(s) 133, 160
HinfI GANTC 5 cut(s) 60, 248, 401, 613, 1514
HpaII CCGG 9 cut(s) 43, 47, 94, 142, 280, 290, 366, 390, 1301
HphI GGTGA 1 cut(s) 1690
Hpy166II GTNNAC 8 cut(s) 133, 160, 382, 538, 1090, 1138, 1472, 1504
Hpy8I GTNNAC 8 cut(s) 133, 160, 382, 538, 1090, 1138, 1472, 1504
Hpy99I CGWCG 4 cut(s) 161, 320, 626, 1326
HpyAV CCTTC 2 cut(s) 1337, 1658
HpyCH4III ACNGT 3 cut(s) 533, 596, 841
HpyCH4IV ACGT 5 cut(s) 156, 208, 569, 800, 1132
HpyCH4V TGCA 6 cut(s) 11, 619, 793, 848, 899, 1528
HpyF10VI GCNNNNNNNGC 8 cut(s) 43, 198, 320, 384, 467, 851, 878, 1242
HpyF3I CTNAG 3 cut(s) 423, 675, 1077
HpySE526I ACGT 5 cut(s) 156, 208, 569, 800, 1132
HspAI GCGC 3 cut(s) 212, 457, 459
KpnI GGTACC 1 cut(s) 1548
Kzo9I GATC 4 cut(s) 231, 508, 913, 1104
LguI GCTCTTC 1 cut(s) 270
LmnI GCTCC 4 cut(s) 128, 282, 1312, 1585
Lsp1109I GCAGC 2 cut(s) 832, 1512
LweI GCATC 3 cut(s) 318, 868, 897
MaeI CTAG 4 cut(s) 495, 779, 1109, 1578
MaeII ACGT 5 cut(s) 156, 208, 569, 800, 1132
MaeIII GTNAC 3 cut(s) 527, 1171, 1398
MalI GATC 4 cut(s) 233, 510, 915, 1106
MbiI CCGCTC 1 cut(s) 1570
MboI GATC 4 cut(s) 231, 508, 913, 1104
MboII GAAGA 9 cut(s) 95, 98, 257, 529, 668, 908, 1190, 1238, 1382
MflI RGATCY 1 cut(s) 1104
MhlI GDGCHC 4 cut(s) 350, 974, 1122, 1460
MluCI AATT 6 cut(s) 462, 999, 1066, 1272, 1293, 1646
MluI ACGCGT 1 cut(s) 624
MlyI GAGTC 1 cut(s) 257
MmeI TCCRAC 2 cut(s) 276, 1031
MroXI GAANNNNTTC 1 cut(s) 1356
MseI TTAA 2 cut(s) 996, 1409
MslI CAYNNNNRTG 3 cut(s) 557, 1160, 1482
MspA1I CMGCKG 2 cut(s) 514, 587
MspI CCGG 9 cut(s) 43, 47, 94, 142, 280, 290, 366, 390, 1301
MvaI CCWGG 3 cut(s) 491, 1382, 1535
MvnI CGCG 5 cut(s) 185, 236, 258, 459, 626
MwoI GCNNNNNNNGC 8 cut(s) 43, 198, 320, 384, 467, 851, 878, 1242
NciI CCSGG 8 cut(s) 43, 48, 94, 95, 142, 281, 367, 390
NcoI CCATGG 2 cut(s) 70, 126
NdeI CATATG 2 cut(s) 484, 1366
NdeII GATC 4 cut(s) 231, 508, 913, 1104
NheI GCTAGC 1 cut(s) 1577
NlaIV GGNNCC 6 cut(s) 98, 347, 397, 1106, 1119, 1546
NmeAIII GCCGAG 1 cut(s) 1591
NmuCI GTSAC 1 cut(s) 527
NspI RCATGY 1 cut(s) 457
NspV TTCGAA 2 cut(s) 63, 1255
PaeI GCATGC 1 cut(s) 457
PauI GCGCGC 1 cut(s) 457
PciSI GCTCTTC 1 cut(s) 270
PdmI GAANNNNTTC 1 cut(s) 1356
PfeI GAWTC 4 cut(s) 60, 401, 613, 1514
PfoI TCCNGGA 1 cut(s) 140
PkrI GCNGC 5 cut(s) 191, 238, 847, 1424, 1527
PleI GAGTC 1 cut(s) 256
PmaCI CACGTG 2 cut(s) 209, 1133
PmlI CACGTG 2 cut(s) 209, 1133
PpsI GAGTC 1 cut(s) 256
Ppu21I YACGTR 3 cut(s) 209, 801, 1133
PpuMI RGGWCCY 1 cut(s) 1667
Psp5II RGGWCCY 1 cut(s) 1667
Psp6I CCWGG 3 cut(s) 489, 1380, 1533
PspCI CACGTG 2 cut(s) 209, 1133
PspGI CCWGG 3 cut(s) 489, 1380, 1533
PspN4I GGNNCC 6 cut(s) 98, 347, 397, 1106, 1119, 1546
PspPI GGNCC 9 cut(s) 91, 97, 282, 292, 395, 468, 737, 1303, 1667
PspPPI RGGWCCY 1 cut(s) 1667
PstI CTGCAG 2 cut(s) 13, 850
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 1 cut(s) 1104
PteI GCGCGC 1 cut(s) 457
PvuII CAGCTG 1 cut(s) 514
RsaI GTAC 8 cut(s) 197, 383, 416, 568, 772, 799, 1061, 1546
RsaNI GTAC 8 cut(s) 196, 382, 415, 567, 771, 798, 1060, 1545
RseI CAYNNNNRTG 3 cut(s) 557, 1160, 1482
Rsr2I CGGWCCG 1 cut(s) 292
RsrII CGGWCCG 1 cut(s) 292
SalI GTCGAC 2 cut(s) 131, 158
SapI GCTCTTC 1 cut(s) 270
SaqAI TTAA 2 cut(s) 996, 1409
SatI GCNGC 5 cut(s) 190, 237, 846, 1423, 1526
Sau3AI GATC 4 cut(s) 231, 508, 913, 1104
Sau96I GGNCC 9 cut(s) 91, 97, 282, 292, 395, 468, 737, 1303, 1667
SchI GAGTC 1 cut(s) 257
SduI GDGCHC 4 cut(s) 350, 974, 1122, 1460
SfaNI GCATC 3 cut(s) 318, 868, 897
SfcI CTRYAG 3 cut(s) 9, 846, 1639
SfuI TTCGAA 2 cut(s) 63, 1255
SinI GGWCC 6 cut(s) 97, 292, 395, 737, 1303, 1667
SmaI CCCGGG 1 cut(s) 95
SmiMI CAYNNNNRTG 3 cut(s) 557, 1160, 1482
SmlI CTYRAG 2 cut(s) 173, 745
SmoI CTYRAG 2 cut(s) 173, 745
SnaBI TACGTA 1 cut(s) 801
SphI GCATGC 1 cut(s) 457
Sse9I AATT 6 cut(s) 462, 999, 1066, 1272, 1293, 1646
SspI AATATT 1 cut(s) 373
SspMI CTAG 4 cut(s) 495, 779, 1109, 1578
StyI CCWWGG 4 cut(s) 70, 126, 733, 1124
TaaI ACNGT 3 cut(s) 533, 596, 841
TaiI ACGT 5 cut(s) 159, 211, 572, 803, 1135
TaqI TCGA 9 cut(s) 63, 132, 159, 225, 332, 411, 1255, 1595, 1662
TasI AATT 6 cut(s) 462, 999, 1066, 1272, 1293, 1646
TatI WGTACW 3 cut(s) 381, 414, 770
TauI GCSGC 3 cut(s) 192, 239, 1425
TfiI GAWTC 4 cut(s) 60, 401, 613, 1514
Tru1I TTAA 2 cut(s) 996, 1409
Tru9I TTAA 2 cut(s) 996, 1409
TscAI CASTG 4 cut(s) 18, 439, 538, 855
TseFI GTSAC 1 cut(s) 527
TseI GCWGC 2 cut(s) 845, 1525
Tsp45I GTSAC 1 cut(s) 527
TspDTI ATGAA 5 cut(s) 541, 562, 1353, 1356, 1383
TspGWI ACGGA 1 cut(s) 1010
TspMI CCCGGG 1 cut(s) 93
TspRI CASTG 4 cut(s) 18, 439, 538, 855
VpaK11BI GGWCC 6 cut(s) 97, 292, 395, 737, 1303, 1667
XapI RAATTY 2 cut(s) 999, 1272
XceI RCATGY 1 cut(s) 457
XmaI CCCGGG 1 cut(s) 93
XmiI GTMKAC 3 cut(s) 132, 159, 537
XmnI GAANNNNTTC 1 cut(s) 1356
XspI CTAG 4 cut(s) 495, 779, 1109, 1578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.