Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Reverse (-)

14774489 .. 14776207

Gene Structure 1719 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g17051.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGGAGCAAACCCGCAAACCCATGAAGATGGAAGTCAAGTTCGCTGAAAATGGAGAAGCCAAAGTCGTCAAGGCCTCAGACGCCTTGCCTTTGCCTCTGTACCTCACCAATGCCGTGTTCTTCACCCTCTTCTTCTCCGTCGCCTACTTCTTGCTCACCAGCTGGCGTGAGAAGATCCGTTCCCACACGCCGTTACATGTGCTCAACCTCTCTGAGATCGTCTCCATTCTTGTCTTGGTTGCTTCCTTCGTCTACCTCCTCGGCTTCTTCGGCATCGATTTCGTTCAGACCCCGAGTCTCAAGGACGAGGAAGAAGACATTATTGTCCAGGAGGACGCTCATATAGTCCCTTGCGGCCAAGCCCTCGAGTGCCCACGTCCCCAGATTGCCGGAATTGCTTCACCTAAACCTGCCCAGAAGGCCATTGTTGAAAACCCAGCGATGGAGACGCCACCACCGACCGCAGAAGATGAGGAGATCATCAAGGCTGTCGTTGCCGGAACCATTCCCTCGTACTCACTCGAGTCAAAGCTAGGAGATTGCAAGAGGGCTGCTTCTATTCGGCGTGAGGCTCTGCAGAGAATTACAGGCAAGTCTCTTGAGGGTTTGCCATTGGAGGGTTTCGATTACGAGTCGATTTTGGGTCAATGCTGTGAAATGCCGGTGGGGTATGTCACCATTCCTGTGGGGATTGCTGGGCCTCTTATGCTTGATGGAAGAGAGTTCTCAATCCCCATGGCCACAACTGAAGGCTGCTTGGTGGCTAGTACCAACCGTGGCTGCAAAGCTATTAACCTGTCCGGTGGAGCTAGCAGTGTGCTTTTGAAGGATGGAATGACCAGAGCACCTGTTGTGAGGTTCAACTCGGCTAGGAGAGCTGCTGAGTTGAAGTTCTACATGGAAGACCCCGAGAATTATGAAACCATATCTATGGTTTTCAACAAATCCAGCAGATTCGGTAGACTTCAGTCTGTCCAGTGCGCCGTTGCTGGGAAGAACCTGTACATGAGATTCTGCTGCAGCACAGGTGATGCTATGGGGATGAACATGGTCTCTAAAGGTGTTCAAAACGTTCTGGATTTCCTCCAAAATGACTTCCCTGACATGGATGTCATTGGCATCTCTGGTAACTACTGCTCTGACAAGAAACCTGCTGCTGTCAACTGGATCGAAGGCCGTGGAAAGTCAGTAGTCTGTGAGGCCGTGATCAAGGGAGACATAGTGACAAAGGTGTTGAAAACCAAAGTGGCGGCCTTGGTGGAGCTTAACATGCTCAAGAACCTCACTGGTTCCGCTATTGCTGGTGCTCTTGGCGGTTTCAATGCGCATGCAAGCAACATTGTTTCAGCAGTCTACCTTGCCACTGGTCAAGACCCTGCTCAGAACATCGAGAGTTCTCACTGTCTCACCATGATGGAAGCCATCAATGATGGCAATGATCTTCATGTCTCAGTAACCATGCCTTCTATTGAGGTCGGCACAGTAGGAGGAGGTACCCAACTTGCATCGCAGTCCGCTTGCCTGAACTTGCTTGGAGTGAAGGGTGCCAACAGAGAGGCACCAGGATCAAACGCAAGGCAATTGGCCACTGTAGTAGCTGGTTCAGTTCTTGCTGGAGAGCTTTCTCTCATGTCTGCTATTGCTGCTGGACAACTTGTTAAGAGCCACATGAAGTACAACAGATCTAGTAAAGATGTGACAACTGTTTCTTCCGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

573

Amino Acids

61.1

Weight (kDa)

5.81

Isoelectric Point (pI)

37.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	185 - 561	3.5e-145	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	323, 1109
Acc16I	TGCGCA	1 cut(s)	1326
Acc36I	ACCTGC	2 cut(s)	418, 1159
Acc65I	GGTACC	1 cut(s)	1493
AccB1I	GGYRCC	3 cut(s)	1493, 1544, 1558
AccI	GTMKAC	3 cut(s)	252, 961, 1353
AciI	CCGC	8 cut(s)	13, 354, 462, 1250, 1293, 1314, 1515, 1713
AclI	AACGTT	1 cut(s)	1071
AclWI	GGATC	3 cut(s)	169, 1175, 1573
AcoI	YGGCCR	3 cut(s)	355, 738, 1584
AcuI	CTGAAG	2 cut(s)	768, 950
AcyI	GRCGYC	2 cut(s)	81, 449
AfaI	GTAC	6 cut(s)	101, 515, 769, 1004, 1495, 1676
AfiI	CCNNNNNNNGG	4 cut(s)	442, 617, 990, 1105
AflIII	ACRYGT	1 cut(s)	196
AgsI	TTSAA	8 cut(s)	431, 826, 862, 889, 940, 1067, 1237, 1321
AhdI	GACNNNNNGTC	1 cut(s)	294
AjiI	CACGTC	1 cut(s)	377
AjnI	CCWGG	2 cut(s)	327, 1561
AjuI	GAANNNNNNNTTGG	2 cut(s)	101, 133
AloI	GAACNNNNNNTCC	2 cut(s)	23, 55
AluBI	AGCT	8 cut(s)	162, 532, 788, 809, 878, 1264, 1598, 1621
AluI	AGCT	8 cut(s)	162, 532, 788, 809, 878, 1264, 1598, 1621
Alw21I	GWGCWC	3 cut(s)	204, 847, 1309
Alw26I	GTCTC	8 cut(s)	226, 302, 440, 600, 1057, 1209, 1409, 1453
AlwI	GGATC	3 cut(s)	169, 1175, 1573
Ama87I	CYCGRG	4 cut(s)	292, 365, 521, 908
AoxI	GGCC	9 cut(s)	72, 355, 420, 698, 738, 1174, 1200, 1251, 1584
ApeKI	GCWGC	8 cut(s)	551, 753, 780, 878, 1017, 1020, 1154, 1643
Asp700I	GAANNNNTTC	1 cut(s)	397
Asp718I	GGTACC	1 cut(s)	1493
AspLEI	GCGC	2 cut(s)	983, 1327
AspS9I	GGNCC	1 cut(s)	698
AsuHPI	GGTGA	7 cut(s)	97, 115, 148, 393, 667, 1040, 1399
AsuNHI	GCTAGC	1 cut(s)	809
AvaI	CYCGRG	4 cut(s)	292, 365, 521, 908
BaeGI	GKGCMC	1 cut(s)	374
BalI	TGGCCA	2 cut(s)	740, 1586
BanI	GGYRCC	3 cut(s)	1493, 1544, 1558
BarI	GAAGNNNNNNTAC	2 cut(s)	986, 1018
BbsI	GAAGAC	2 cut(s)	321, 909
Bbv12I	GWGCWC	3 cut(s)	204, 847, 1309
BbvI	GCAGC	8 cut(s)	538, 740, 767, 865, 1004, 1032, 1141, 1630
BccI	CCATC	7 cut(s)	22, 436, 707, 824, 1408, 1424, 1430
BceAI	ACGGC	5 cut(s)	98, 175, 968, 1161, 1187
BcgI	CGANNNNNNTGC	2 cut(s)	262, 296
BciT130I	CCWGG	2 cut(s)	329, 1563
BclI	TGATCA	1 cut(s)	1206
BcoDI	GTCTC	8 cut(s)	226, 302, 440, 600, 1057, 1209, 1409, 1453
BfaI	CTAG	5 cut(s)	533, 765, 810, 870, 1686
BfmI	CTRYAG	3 cut(s)	575, 1018, 1590
BfuAI	ACCTGC	2 cut(s)	418, 1159
BglI	GCCNNNNNGGC	1 cut(s)	419
BglII	AGATCT	1 cut(s)	1682
Bme1390I	CCNGG	2 cut(s)	329, 1563
BmeRI	GACNNNNNGTC	1 cut(s)	294
BmeT110I	CYCGRG	4 cut(s)	292, 365, 521, 908
BmgBI	CACGTC	1 cut(s)	377
BmgT120I	GGNCC	1 cut(s)	698
BmiI	GGNNCC	5 cut(s)	502, 1291, 1495, 1546, 1560
BmrFI	CCNGG	2 cut(s)	329, 1563
BmsI	GCATC	4 cut(s)	282, 1021, 1128, 1514
BmtI	GCTAGC	1 cut(s)	813
BoxI	GACNNNNGTC	1 cut(s)	967
BpiI	GAAGAC	2 cut(s)	321, 909
BplI	GAGNNNNNCTC	2 cut(s)	206, 238
BpmI	CTGGAG	1 cut(s)	1635
BpuEI	CTTGAG	3 cut(s)	284, 620, 1259
Bsa29I	ATCGAT	1 cut(s)	276
BsaHI	GRCGYC	2 cut(s)	81, 449
BsaI	GGTCTC	1 cut(s)	1057
BsaJI	CCNNGG	5 cut(s)	259, 735, 775, 1177, 1254
BsaWI	WCCGGW	1 cut(s)	800
BsaXI	ACNNNNNCTCC	2 cut(s)	1206, 1236
Bsc4I	CCNNNNNNNGG	4 cut(s)	442, 617, 990, 1105
Bse118I	RCCGGY	1 cut(s)	661
Bse1I	ACTGG	4 cut(s)	976, 1169, 1291, 1369
Bse3DI	GCAATG	1 cut(s)	1441
BseBI	CCWGG	2 cut(s)	329, 1563
BseCI	ATCGAT	1 cut(s)	276
BseDI	CCNNGG	5 cut(s)	259, 735, 775, 1177, 1254
BseGI	GGATG	3 cut(s)	835, 1047, 1114
BseLI	CCNNNNNNNGG	4 cut(s)	442, 617, 990, 1105
BseMI	GCAATG	1 cut(s)	1441
BseMII	CTCAG	5 cut(s)	90, 204, 873, 1394, 1464
BseNI	ACTGG	4 cut(s)	976, 1169, 1291, 1369
BseRI	GAGGAG	3 cut(s)	248, 488, 1503
BseSI	GKGCMC	1 cut(s)	374
BseXI	GCAGC	8 cut(s)	538, 740, 767, 865, 1004, 1032, 1141, 1630
BseYI	CCCAGC	3 cut(s)	436, 695, 989
Bsh1285I	CGRYCG	1 cut(s)	462
BshFI	GGCC	9 cut(s)	74, 357, 422, 700, 740, 1176, 1202, 1253, 1586
BshNI	GGYRCC	3 cut(s)	1493, 1544, 1558
BshVI	ATCGAT	1 cut(s)	276
BsiEI	CGRYCG	1 cut(s)	462
BsiHKAI	GWGCWC	3 cut(s)	204, 847, 1309
BsiHKCI	CYCGRG	4 cut(s)	292, 365, 521, 908
BsiSI	CCGG	4 cut(s)	390, 498, 662, 801
BslFI	GGGAC	2 cut(s)	332, 363
BslI	CCNNNNNNNGG	4 cut(s)	442, 617, 990, 1105
BsmAI	GTCTC	8 cut(s)	226, 302, 440, 600, 1057, 1209, 1409, 1453
BsmBI	CGTCTC	2 cut(s)	226, 440
BsmFI	GGGAC	2 cut(s)	332, 363
BsnI	GGCC	9 cut(s)	74, 357, 422, 700, 740, 1176, 1202, 1253, 1586
Bso31I	GGTCTC	1 cut(s)	1057
BsoBI	CYCGRG	4 cut(s)	292, 365, 521, 908
Bsp1286I	GDGCHC	4 cut(s)	204, 374, 847, 1309
Bsp1407I	TGTACA	1 cut(s)	1002
Bsp143I	GATC	8 cut(s)	174, 216, 477, 1167, 1206, 1438, 1565, 1682
Bsp19I	CCATGG	1 cut(s)	735
BspACI	CCGC	8 cut(s)	13, 354, 462, 1250, 1293, 1314, 1515, 1713
BspANI	GGCC	9 cut(s)	74, 357, 422, 700, 740, 1176, 1202, 1253, 1586
BspCNI	CTCAG	5 cut(s)	89, 205, 874, 1393, 1463
BspDI	ATCGAT	1 cut(s)	276
BspLI	GGNNCC	5 cut(s)	502, 1291, 1495, 1546, 1560
BspMAI	CTGCAG	2 cut(s)	579, 1022
BspMI	ACCTGC	2 cut(s)	418, 1159
BspOI	GCTAGC	1 cut(s)	813
BspPI	GGATC	3 cut(s)	169, 1175, 1573
BspT107I	GGYRCC	3 cut(s)	1493, 1544, 1558
BspTNI	GGTCTC	1 cut(s)	1057
BsrDI	GCAATG	1 cut(s)	1441
BsrFI	RCCGGY	1 cut(s)	661
BsrGI	TGTACA	1 cut(s)	1002
BsrI	ACTGG	4 cut(s)	976, 1169, 1291, 1369
BssAI	RCCGGY	1 cut(s)	661
BssECI	CCNNGG	5 cut(s)	259, 735, 775, 1177, 1254
BssMI	GATC	8 cut(s)	174, 216, 477, 1167, 1206, 1438, 1565, 1682
BssNI	GRCGYC	2 cut(s)	81, 449
BssT1I	CCWWGG	2 cut(s)	735, 1254
Bst2UI	CCWGG	2 cut(s)	329, 1563
Bst4CI	ACNGT	5 cut(s)	776, 1403, 1483, 1591, 1705
Bst6I	CTCTTC	2 cut(s)	134, 712
BstACI	GRCGYC	2 cut(s)	81, 449
BstAUI	TGTACA	1 cut(s)	1002
BstC8I	GCNNGC	5 cut(s)	164, 811, 1329, 1333, 1519
BstDEI	CTNAG	5 cut(s)	76, 213, 882, 1380, 1450
BstDSI	CCRYGG	3 cut(s)	735, 775, 1177
BstF5I	GGATG	3 cut(s)	835, 1047, 1114
BstHHI	GCGC	2 cut(s)	983, 1327
BstKTI	GATC	8 cut(s)	177, 219, 480, 1170, 1209, 1441, 1568, 1685
BstMAI	GTCTC	8 cut(s)	226, 302, 440, 600, 1057, 1209, 1409, 1453
BstMBI	GATC	8 cut(s)	174, 216, 477, 1167, 1206, 1438, 1565, 1682
BstMCI	CGRYCG	1 cut(s)	462
BstMWI	GCNNNNNNNGC	9 cut(s)	80, 270, 395, 419, 494, 706, 875, 1270, 1643
BstNI	CCWGG	2 cut(s)	329, 1563
BstNSI	RCATGY	3 cut(s)	200, 1273, 1331
BstPAI	GACNNNNGTC	1 cut(s)	967
BstSCI	CCNGG	2 cut(s)	327, 1561
BstSFI	CTRYAG	3 cut(s)	575, 1018, 1590
BstSLI	GKGCMC	1 cut(s)	374
BstV1I	GCAGC	8 cut(s)	538, 740, 767, 865, 1004, 1032, 1141, 1630
BstV2I	GAAGAC	2 cut(s)	321, 909
BstX2I	RGATCY	2 cut(s)	174, 1682
BstXI	CCANNNNNNTGG	3 cut(s)	28, 685, 931
BstYI	RGATCY	2 cut(s)	174, 1682
Bsu15I	ATCGAT	1 cut(s)	276
BsuRI	GGCC	9 cut(s)	74, 357, 422, 700, 740, 1176, 1202, 1253, 1586
BsuTUI	ATCGAT	1 cut(s)	276
BtgI	CCRYGG	3 cut(s)	735, 775, 1177
BtgZI	GCGATG	2 cut(s)	455, 1491
BtrI	CACGTC	1 cut(s)	377
BtsCI	GGATG	3 cut(s)	835, 1047, 1114
BtsI	GCAGTG	1 cut(s)	820
BtsIMutI	CAGTG	6 cut(s)	820, 983, 1284, 1362, 1399, 1587
BveI	ACCTGC	2 cut(s)	418, 1159
Cac8I	GCNNGC	5 cut(s)	164, 811, 1329, 1333, 1519
CfoI	GCGC	2 cut(s)	983, 1327
Cfr10I	RCCGGY	1 cut(s)	661
Cfr13I	GGNCC	1 cut(s)	698
ClaI	ATCGAT	1 cut(s)	276
CseI	GACGC	3 cut(s)	89, 344, 457
Csp6I	GTAC	6 cut(s)	100, 514, 768, 1003, 1494, 1675
CviQI	GTAC	6 cut(s)	100, 514, 768, 1003, 1494, 1675
DdeI	CTNAG	5 cut(s)	76, 213, 882, 1380, 1450
DpnI	GATC	8 cut(s)	176, 218, 479, 1169, 1208, 1440, 1567, 1684
DpnII	GATC	8 cut(s)	174, 216, 477, 1167, 1206, 1438, 1565, 1682
DrdI	GACNNNNNNGTC	2 cut(s)	323, 1109
DriI	GACNNNNNGTC	1 cut(s)	294
DseDI	GACNNNNNNGTC	2 cut(s)	323, 1109
EaeI	YGGCCR	3 cut(s)	355, 738, 1584
Eam1104I	CTCTTC	2 cut(s)	134, 712
Eam1105I	GACNNNNNGTC	1 cut(s)	294
EarI	CTCTTC	2 cut(s)	134, 712
Eco130I	CCWWGG	2 cut(s)	735, 1254
Eco147I	AGGCCT	1 cut(s)	74
Eco31I	GGTCTC	1 cut(s)	1057
Eco57I	CTGAAG	2 cut(s)	768, 950
Eco88I	CYCGRG	4 cut(s)	292, 365, 521, 908
EcoRII	CCWGG	2 cut(s)	327, 1561
EcoT14I	CCWWGG	2 cut(s)	735, 1254
ErhI	CCWWGG	2 cut(s)	735, 1254
Esp3I	CGTCTC	2 cut(s)	226, 440
FaqI	GGGAC	2 cut(s)	332, 363
FauI	CCCGC	1 cut(s)	20
FbaI	TGATCA	1 cut(s)	1206
FblI	GTMKAC	3 cut(s)	252, 961, 1353
FokI	GGATG	3 cut(s)	842, 1054, 1121
FspAI	RTGCGCAY	1 cut(s)	1326
FspBI	CTAG	5 cut(s)	533, 765, 810, 870, 1686
FspI	TGCGCA	1 cut(s)	1326
GlaI	GCGC	2 cut(s)	982, 1326
GsaI	CCCAGC	3 cut(s)	440, 699, 993
GsuI	CTGGAG	1 cut(s)	1635
HaeIII	GGCC	9 cut(s)	74, 357, 422, 700, 740, 1176, 1202, 1253, 1586
HapII	CCGG	4 cut(s)	390, 498, 662, 801
HgaI	GACGC	3 cut(s)	89, 344, 457
HhaI	GCGC	2 cut(s)	983, 1327
Hin1I	GRCGYC	2 cut(s)	81, 449
Hin6I	GCGC	2 cut(s)	981, 1325
HinP1I	GCGC	2 cut(s)	981, 1325
HincII	GTYRAC	1 cut(s)	1162
HindII	GTYRAC	1 cut(s)	1162
HinfI	GANTC	5 cut(s)	295, 524, 632, 954, 1011
HpaII	CCGG	4 cut(s)	390, 498, 662, 801
HphI	GGTGA	7 cut(s)	97, 115, 148, 393, 667, 1040, 1399
Hpy166II	GTNNAC	4 cut(s)	253, 962, 1162, 1354
Hpy188I	TCNGA	5 cut(s)	79, 214, 288, 1141, 1383
Hpy188III	TCNNGA	5 cut(s)	599, 1076, 1276, 1370, 1390
Hpy8I	GTNNAC	4 cut(s)	253, 962, 1162, 1354
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	7 cut(s)	256, 412, 743, 820, 1166, 1473, 1534
HpyCH4III	ACNGT	5 cut(s)	776, 1403, 1483, 1591, 1705
HpyCH4IV	ACGT	2 cut(s)	376, 1071
HpyCH4V	TGCA	6 cut(s)	543, 577, 783, 1020, 1331, 1505
HpyF10VI	GCNNNNNNNGC	9 cut(s)	80, 270, 395, 419, 494, 706, 875, 1270, 1643
HpyF3I	CTNAG	5 cut(s)	76, 213, 882, 1380, 1450
HpySE526I	ACGT	2 cut(s)	376, 1071
Hsp92I	GRCGYC	2 cut(s)	81, 449
HspAI	GCGC	2 cut(s)	981, 1325
KpnI	GGTACC	1 cut(s)	1497
Ksp22I	TGATCA	1 cut(s)	1206
Kzo9I	GATC	8 cut(s)	174, 216, 477, 1167, 1206, 1438, 1565, 1682
LmnI	GCTCC	3 cut(s)	4, 806, 1261
Lsp1109I	GCAGC	8 cut(s)	538, 740, 767, 865, 1004, 1032, 1141, 1630
LweI	GCATC	4 cut(s)	282, 1021, 1128, 1514
MaeI	CTAG	5 cut(s)	533, 765, 810, 870, 1686
MaeII	ACGT	2 cut(s)	376, 1071
MaeIII	GTNAC	6 cut(s)	192, 673, 1127, 1222, 1453, 1696
MalI	GATC	8 cut(s)	176, 218, 479, 1169, 1208, 1440, 1567, 1684
MboI	GATC	8 cut(s)	174, 216, 477, 1167, 1206, 1438, 1565, 1682
MfeI	CAATTG	1 cut(s)	1580
MflI	RGATCY	2 cut(s)	174, 1682
MhlI	GDGCHC	4 cut(s)	204, 374, 847, 1309
MlsI	TGGCCA	2 cut(s)	740, 1586
MluCI	AATT	4 cut(s)	393, 582, 913, 1580
MluNI	TGGCCA	2 cut(s)	740, 1586
MlyI	GAGTC	3 cut(s)	304, 533, 641
Mox20I	TGGCCA	2 cut(s)	740, 1586
MroXI	GAANNNNTTC	1 cut(s)	397
MscI	TGGCCA	2 cut(s)	740, 1586
MseI	TTAA	3 cut(s)	792, 1266, 1659
MslI	CAYNNNNRTG	4 cut(s)	26, 683, 929, 1412
Msp20I	TGGCCA	2 cut(s)	740, 1586
MspA1I	CMGCKG	1 cut(s)	162
MspI	CCGG	4 cut(s)	390, 498, 662, 801
MspR9I	CCNGG	2 cut(s)	329, 1563
MunI	CAATTG	1 cut(s)	1580
MvaI	CCWGG	2 cut(s)	329, 1563
MwoI	GCNNNNNNNGC	9 cut(s)	80, 270, 395, 419, 494, 706, 875, 1270, 1643
NcoI	CCATGG	1 cut(s)	735
NdeII	GATC	8 cut(s)	174, 216, 477, 1167, 1206, 1438, 1565, 1682
NheI	GCTAGC	1 cut(s)	809
NlaIV	GGNNCC	5 cut(s)	502, 1291, 1495, 1546, 1560
NmeAIII	GCCGAG	2 cut(s)	240, 845
NmuCI	GTSAC	3 cut(s)	673, 1222, 1696
NsbI	TGCGCA	1 cut(s)	1326
NspI	RCATGY	3 cut(s)	200, 1273, 1331
PaeI	GCATGC	1 cut(s)	1331
PaeR7I	CTCGAG	2 cut(s)	365, 521
PceI	AGGCCT	1 cut(s)	74
PciI	ACATGT	1 cut(s)	196
PcsI	WCGNNNNNNNCGW	1 cut(s)	455
PdmI	GAANNNNTTC	1 cut(s)	397
PfeI	GAWTC	2 cut(s)	954, 1011
PfoI	TCCNGGA	1 cut(s)	327
PleI	GAGTC	3 cut(s)	303, 532, 640
PpsI	GAGTC	3 cut(s)	303, 532, 640
PscI	ACATGT	1 cut(s)	196
PshAI	GACNNNNGTC	1 cut(s)	967
Psp1406I	AACGTT	1 cut(s)	1071
Psp6I	CCWGG	2 cut(s)	327, 1561
PspFI	CCCAGC	3 cut(s)	436, 695, 989
PspGI	CCWGG	2 cut(s)	327, 1561
PspN4I	GGNNCC	5 cut(s)	502, 1291, 1495, 1546, 1560
PspPI	GGNCC	1 cut(s)	698
PspXI	VCTCGAGB	2 cut(s)	365, 521
PstI	CTGCAG	2 cut(s)	579, 1022
PsuI	RGATCY	2 cut(s)	174, 1682
PvuII	CAGCTG	1 cut(s)	162
RsaI	GTAC	6 cut(s)	101, 515, 769, 1004, 1495, 1676
RsaNI	GTAC	6 cut(s)	100, 514, 768, 1003, 1494, 1675
RseI	CAYNNNNRTG	4 cut(s)	26, 683, 929, 1412
SaqAI	TTAA	3 cut(s)	792, 1266, 1659
Sau3AI	GATC	8 cut(s)	174, 216, 477, 1167, 1206, 1438, 1565, 1682
Sau96I	GGNCC	1 cut(s)	698
SchI	GAGTC	3 cut(s)	304, 533, 641
ScrFI	CCNGG	2 cut(s)	329, 1563
SduI	GDGCHC	4 cut(s)	204, 374, 847, 1309
SfaNI	GCATC	4 cut(s)	282, 1021, 1128, 1514
SfcI	CTRYAG	3 cut(s)	575, 1018, 1590
Sfr274I	CTCGAG	2 cut(s)	365, 521
SlaI	CTCGAG	2 cut(s)	365, 521
SmiMI	CAYNNNNRTG	4 cut(s)	26, 683, 929, 1412
SmlI	CTYRAG	5 cut(s)	299, 365, 521, 599, 1274
SmoI	CTYRAG	5 cut(s)	299, 365, 521, 599, 1274
SphI	GCATGC	1 cut(s)	1331
Sse9I	AATT	4 cut(s)	393, 582, 913, 1580
SseBI	AGGCCT	1 cut(s)	74
SsiI	CCGC	8 cut(s)	13, 354, 462, 1250, 1293, 1314, 1515, 1713
SspMI	CTAG	5 cut(s)	533, 765, 810, 870, 1686
StuI	AGGCCT	1 cut(s)	74
StyD4I	CCNGG	2 cut(s)	327, 1561
StyI	CCWWGG	2 cut(s)	735, 1254
TaaI	ACNGT	5 cut(s)	776, 1403, 1483, 1591, 1705
TaiI	ACGT	2 cut(s)	379, 1074
TaqI	TCGA	7 cut(s)	276, 366, 522, 624, 635, 1170, 1389
TasI	AATT	4 cut(s)	393, 582, 913, 1580
TatI	WGTACW	2 cut(s)	1002, 1674
TauI	GCSGC	2 cut(s)	357, 1253
TfiI	GAWTC	2 cut(s)	954, 1011
Tru1I	TTAA	3 cut(s)	792, 1266, 1659
Tru9I	TTAA	3 cut(s)	792, 1266, 1659
TscAI	CASTG	6 cut(s)	820, 983, 1291, 1369, 1406, 1594
TseFI	GTSAC	3 cut(s)	673, 1222, 1696
TseI	GCWGC	8 cut(s)	551, 753, 780, 878, 1017, 1020, 1154, 1643
Tsp45I	GTSAC	3 cut(s)	673, 1222, 1696
TspDTI	ATGAA	5 cut(s)	38, 933, 1058, 1433, 1685
TspGWI	ACGGA	2 cut(s)	127, 167
TspRI	CASTG	6 cut(s)	820, 983, 1291, 1369, 1406, 1594
XceI	RCATGY	3 cut(s)	200, 1273, 1331
XcmI	CCANNNNNNNNNTGG	1 cut(s)	232
XhoI	CTCGAG	2 cut(s)	365, 521
XmiI	GTMKAC	3 cut(s)	252, 961, 1353
XmnI	GAANNNNTTC	1 cut(s)	397
XspI	CTAG	5 cut(s)	533, 765, 810, 870, 1686

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.