Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Forward (+)

26578043 .. 26579776

Gene Structure 1734 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00187180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGGAGCACACTACCGGCAAGGGAGGCAACAAGCCCGTGAAAACGAAAGTCAAGTTCGTCGACGATAAGGAAACCAAAGAGGATGCTTACGTGGTCCCTTGCGGCCAAGCCCTCGAGTGCCCGGTTCCCCTGATTGCCCCTAAAGTTGCACAGAAGGTGTTTGATGAAAGGCCAGCCATCGAGACCCCACCACCGACTGCAGAAGATGAGGAGATTATCAAGGCTGTGGTTGCCGGAACCATTCCTTCATATTCACTCGAGTCAAAGCTCGGCGATTGCAAGAGGGCTGCTTCTATCAGGCGCGAGGCTTTACAGAGAGTTACAGGCAAGTCTTTGGAGGGTTTGCCTTTGGAGGGATTTGATTACGAGTCCATTTTGGGTCAATGCTGTGAAATGCCAATTGGGTATGTTACCATTCCTGTTGGGATTGCCGGGCCTCTCATGCTTGATGGAAGAGAGTTCTCTCTCCCCATGGCCACAACTGAAGGTTGCTTGGTGGCTAGTACCAACCGTGGTTGCAAAGCTATTAACTTATCTGGTGGAGCTTCAAGTGTTTTATTGAAAGATGGGATGACCAGAGCACCTGTTGTCAGATTCAACTCTGCTAAGAGAGCGGCTGAGTTGAAGTTCTTCATGGAAGACCCCGACAATTACGAAACCATCTCTATGGTTTTCAACAAATCAAGCAGATTTGGTAGGCTTCAGACCGTCAAGTGTGCAGTTGCTGGGAAGAACCTGTACATGAGATTCTGCTGCAGTACCGGTGATGCTATGGGGATGAACATGGTCTCTAAAGGTGTTCAAAACGTTCTTGATTTCCTCCAGAGTGACTTCCCTGACATGGATGTCATTGGCATTTCTGGTAACTACTGCTCAGACAAGAAACCTGCTGCTGTTAACTGGATTGAAGGCCGTGGCAAATCTGTGGTTTGCGAGGCTGTTATCAAGGGAGACATAGTGACGAAGGTGTTGAAAACCAATGTGGCAGCCTTGGTGGAGCTTAACGTGCTCAAGAATCTTACTGGTTCTGCAATTGCTGGTGCCCTTGGTGGTTTCAATGCACATGCCAGTAACATTGTTTCAGCAGTCTACCTAGCCACTGGTCAAGATCCAGCTCAGAACATCGAGAGTTCTCACTGTATCACCATGATGGAAGCCATCAATGATGGCAAGGATCTTCACGTCTCAGTGACCATGCCTTCTATTGAGGTCGGCACAGTAGGAGGAGGTACCCAACTGGCATCGCAGTCGGCTTGCTTGAATTTGCTTGGAGTGAAGGGTGCCAACAGAGAGGCACCAGGATCAAACGCAAGGCAGTTGGCAAGTGTTGTAGCTGGTGCTGTTCTTGCTGGAGAGCTGTCTCTCATGTCTGCCATTGCTGCTGGACAACTTGTTAAGAGCCACATGAAGTACAACAGATCTAGCAAAGATGTCACTGCTGTTGCTTCCGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

484

Amino Acids

50.97

Weight (kDa)

6.94

Isoelectric Point (pI)

34.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	97 - 473	1.4e-145	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	845
Acc36I	ACCTGC	1 cut(s)	895
Acc65I	GGTACC	1 cut(s)	1229
AccB1I	GGYRCC	4 cut(s)	1040, 1229, 1280, 1294
AccBSI	CCGCTC	1 cut(s)	614
AccI	GTMKAC	2 cut(s)	60, 1089
AccII	CGCG	1 cut(s)	303
AciI	CCGC	3 cut(s)	102, 614, 1449
AclI	AACGTT	1 cut(s)	807
AclWI	GGATC	3 cut(s)	1103, 1182, 1309
AcoI	YGGCCR	2 cut(s)	103, 474
AcsI	RAATTY	1 cut(s)	1261
AcuI	CTGAAG	2 cut(s)	504, 686
AfaI	GTAC	5 cut(s)	505, 740, 760, 1231, 1412
AfiI	CCNNNNNNNGG	2 cut(s)	353, 841
AgeI	ACCGGT	1 cut(s)	761
AjiI	CACGTC	1 cut(s)	1183
AjnI	CCWGG	1 cut(s)	1297
AjuI	GAANNNNNNNTTGG	2 cut(s)	384, 416
AluBI	AGCT	7 cut(s)	268, 524, 545, 1000, 1115, 1334, 1357
AluI	AGCT	7 cut(s)	268, 524, 545, 1000, 1115, 1334, 1357
Alw21I	GWGCWC	3 cut(s)	9, 583, 1011
Alw26I	GTCTC	5 cut(s)	176, 793, 945, 1189, 1365
AlwI	GGATC	3 cut(s)	1103, 1182, 1309
AlwNI	CAGNNNCTG	1 cut(s)	725
Ama87I	CYCGRG	2 cut(s)	113, 257
AoxI	GGCC	5 cut(s)	103, 170, 434, 474, 910
ApeKI	GCWGC	5 cut(s)	287, 753, 890, 986, 1379
ApoI	RAATTY	1 cut(s)	1261
AsiGI	ACCGGT	1 cut(s)	761
Asp700I	GAANNNNTTC	1 cut(s)	629
Asp718I	GGTACC	1 cut(s)	1229
AspLEI	GCGC	1 cut(s)	303
AspS9I	GGNCC	2 cut(s)	94, 434
AsuC2I	CCSGG	2 cut(s)	122, 433
AsuHPI	GGTGA	2 cut(s)	776, 1135
AvaI	CYCGRG	2 cut(s)	113, 257
AvaII	GGWCC	1 cut(s)	94
BaeGI	GKGCMC	2 cut(s)	122, 1045
BalI	TGGCCA	1 cut(s)	476
BanI	GGYRCC	4 cut(s)	1040, 1229, 1280, 1294
BarI	GAAGNNNNNNTAC	2 cut(s)	722, 754
BbsI	GAAGAC	1 cut(s)	645
Bbv12I	GWGCWC	3 cut(s)	9, 583, 1011
BbvI	GCAGC	5 cut(s)	274, 740, 877, 998, 1366
BccI	CCATC	7 cut(s)	185, 443, 560, 668, 1144, 1160, 1166
BceAI	ACGGC	1 cut(s)	897
BcgI	CGANNNNNNTGC	2 cut(s)	1230, 1264
BciT130I	CCWGG	1 cut(s)	1299
BcnI	CCSGG	2 cut(s)	122, 433
BcoDI	GTCTC	5 cut(s)	176, 793, 945, 1189, 1365
BfaI	CTAG	3 cut(s)	501, 1094, 1422
BfmI	CTRYAG	2 cut(s)	198, 754
BfuAI	ACCTGC	1 cut(s)	895
BglII	AGATCT	1 cut(s)	1418
BisI	GCNGC	7 cut(s)	103, 288, 615, 754, 891, 987, 1380
BlsI	GCNGC	7 cut(s)	104, 289, 616, 755, 892, 988, 1381
Bme1390I	CCNGG	3 cut(s)	122, 433, 1299
Bme18I	GGWCC	1 cut(s)	94
BmeT110I	CYCGRG	2 cut(s)	113, 257
BmgBI	CACGTC	1 cut(s)	1183
BmgT120I	GGNCC	2 cut(s)	94, 434
BmiI	GGNNCC	7 cut(s)	96, 126, 238, 1042, 1231, 1282, 1296
BmrFI	CCNGG	3 cut(s)	122, 433, 1299
BmsI	GCATC	3 cut(s)	73, 757, 1250
BpiI	GAAGAC	1 cut(s)	645
BpmI	CTGGAG	2 cut(s)	806, 1371
BpuEI	CTTGAG	1 cut(s)	995
BpuMI	CCSGG	2 cut(s)	122, 433
BsaAI	YACGTR	1 cut(s)	91
BsaI	GGTCTC	2 cut(s)	176, 793
BsaJI	CCNNGG	5 cut(s)	471, 511, 913, 990, 1045
BsaWI	WCCGGW	1 cut(s)	761
BsaXI	ACNNNNNCTCC	2 cut(s)	942, 972
Bsc4I	CCNNNNNNNGG	2 cut(s)	353, 841
Bse118I	RCCGGY	2 cut(s)	14, 761
Bse1I	ACTGG	5 cut(s)	905, 1027, 1068, 1105, 1242
Bse3DI	GCAATG	1 cut(s)	1374
BseBI	CCWGG	1 cut(s)	1299
BseDI	CCNNGG	5 cut(s)	471, 511, 913, 990, 1045
BseGI	GGATG	4 cut(s)	88, 576, 783, 850
BseLI	CCNNNNNNNGG	2 cut(s)	353, 841
BseMI	GCAATG	1 cut(s)	1374
BseMII	CTCAG	4 cut(s)	609, 888, 1130, 1200
BseNI	ACTGG	5 cut(s)	905, 1027, 1068, 1105, 1242
BseRI	GAGGAG	2 cut(s)	224, 1239
BseSI	GKGCMC	2 cut(s)	122, 1045
BseXI	GCAGC	5 cut(s)	274, 740, 877, 998, 1366
BseYI	CCCAGC	1 cut(s)	725
BsgI	GTGCAG	1 cut(s)	738
Bsh1236I	CGCG	1 cut(s)	303
BshFI	GGCC	5 cut(s)	105, 172, 436, 476, 912
BshNI	GGYRCC	4 cut(s)	1040, 1229, 1280, 1294
BshTI	ACCGGT	1 cut(s)	761
BsiHKAI	GWGCWC	3 cut(s)	9, 583, 1011
BsiHKCI	CYCGRG	2 cut(s)	113, 257
BsiSI	CCGG	5 cut(s)	15, 122, 234, 432, 762
BslFI	GGGAC	1 cut(s)	80
BslI	CCNNNNNNNGG	2 cut(s)	353, 841
BsmAI	GTCTC	5 cut(s)	176, 793, 945, 1189, 1365
BsmBI	CGTCTC	1 cut(s)	1189
BsmFI	GGGAC	1 cut(s)	80
BsnI	GGCC	5 cut(s)	105, 172, 436, 476, 912
Bso31I	GGTCTC	2 cut(s)	176, 793
BsoBI	CYCGRG	2 cut(s)	113, 257
Bsp1286I	GDGCHC	5 cut(s)	9, 122, 583, 1011, 1045
Bsp1407I	TGTACA	1 cut(s)	738
Bsp143I	GATC	4 cut(s)	1108, 1174, 1301, 1418
Bsp19I	CCATGG	1 cut(s)	471
BspACI	CCGC	3 cut(s)	102, 614, 1449
BspANI	GGCC	5 cut(s)	105, 172, 436, 476, 912
BspCNI	CTCAG	4 cut(s)	610, 887, 1129, 1199
BspFNI	CGCG	1 cut(s)	303
BspLI	GGNNCC	7 cut(s)	96, 126, 238, 1042, 1231, 1282, 1296
BspMAI	CTGCAG	2 cut(s)	202, 758
BspMI	ACCTGC	1 cut(s)	895
BspPI	GGATC	3 cut(s)	1103, 1182, 1309
BspT107I	GGYRCC	4 cut(s)	1040, 1229, 1280, 1294
BspTNI	GGTCTC	2 cut(s)	176, 793
BsrBI	CCGCTC	1 cut(s)	614
BsrDI	GCAATG	1 cut(s)	1374
BsrFI	RCCGGY	2 cut(s)	14, 761
BsrGI	TGTACA	1 cut(s)	738
BsrI	ACTGG	5 cut(s)	905, 1027, 1068, 1105, 1242
BssAI	RCCGGY	2 cut(s)	14, 761
BssECI	CCNNGG	5 cut(s)	471, 511, 913, 990, 1045
BssMI	GATC	4 cut(s)	1108, 1174, 1301, 1418
BssT1I	CCWWGG	3 cut(s)	471, 990, 1045
Bst2UI	CCWGG	1 cut(s)	1299
Bst4CI	ACNGT	4 cut(s)	512, 709, 1139, 1219
Bst6I	CTCTTC	1 cut(s)	448
BstAUI	TGTACA	1 cut(s)	738
BstBAI	YACGTR	1 cut(s)	91
BstC8I	GCNNGC	2 cut(s)	174, 1255
BstDEI	CTNAG	5 cut(s)	606, 618, 874, 1116, 1186
BstDSI	CCRYGG	3 cut(s)	471, 511, 913
BstF5I	GGATG	4 cut(s)	88, 576, 783, 850
BstFNI	CGCG	1 cut(s)	303
BstHHI	GCGC	1 cut(s)	303
BstKTI	GATC	4 cut(s)	1111, 1177, 1304, 1421
BstMAI	GTCTC	5 cut(s)	176, 793, 945, 1189, 1365
BstMBI	GATC	4 cut(s)	1108, 1174, 1301, 1418
BstMWI	GCNNNNNNNGC	7 cut(s)	24, 230, 442, 611, 1006, 1346, 1379
BstNI	CCWGG	1 cut(s)	1299
BstNSI	RCATGY	1 cut(s)	1067
BstSCI	CCNGG	3 cut(s)	120, 431, 1297
BstSFI	CTRYAG	2 cut(s)	198, 754
BstSLI	GKGCMC	2 cut(s)	122, 1045
BstUI	CGCG	1 cut(s)	303
BstV1I	GCAGC	5 cut(s)	274, 740, 877, 998, 1366
BstV2I	GAAGAC	1 cut(s)	645
BstX2I	RGATCY	3 cut(s)	1108, 1174, 1418
BstXI	CCANNNNNNTGG	1 cut(s)	667
BstYI	RGATCY	3 cut(s)	1108, 1174, 1418
BsuRI	GGCC	5 cut(s)	105, 172, 436, 476, 912
BtgI	CCRYGG	3 cut(s)	471, 511, 913
BtgZI	GCGATG	1 cut(s)	1227
BtrI	CACGTC	1 cut(s)	1183
BtsCI	GGATG	4 cut(s)	88, 576, 783, 850
BtsI	GCAGTG	1 cut(s)	1434
BtsIMutI	CAGTG	4 cut(s)	1098, 1135, 1194, 1434
BveI	ACCTGC	1 cut(s)	895
Cac8I	GCNNGC	2 cut(s)	174, 1255
CaiI	CAGNNNCTG	1 cut(s)	725
CfoI	GCGC	1 cut(s)	303
Cfr10I	RCCGGY	2 cut(s)	14, 761
Cfr13I	GGNCC	2 cut(s)	94, 434
Csp6I	GTAC	5 cut(s)	504, 739, 759, 1230, 1411
CspAI	ACCGGT	1 cut(s)	761
CviQI	GTAC	5 cut(s)	504, 739, 759, 1230, 1411
DdeI	CTNAG	5 cut(s)	606, 618, 874, 1116, 1186
DpnI	GATC	4 cut(s)	1110, 1176, 1303, 1420
DpnII	GATC	4 cut(s)	1108, 1174, 1301, 1418
DrdI	GACNNNNNNGTC	1 cut(s)	845
DseDI	GACNNNNNNGTC	1 cut(s)	845
EaeI	YGGCCR	2 cut(s)	103, 474
Eam1104I	CTCTTC	1 cut(s)	448
EarI	CTCTTC	1 cut(s)	448
Eco130I	CCWWGG	3 cut(s)	471, 990, 1045
Eco31I	GGTCTC	2 cut(s)	176, 793
Eco47I	GGWCC	1 cut(s)	94
Eco57I	CTGAAG	2 cut(s)	504, 686
Eco88I	CYCGRG	2 cut(s)	113, 257
EcoRII	CCWGG	1 cut(s)	1297
EcoT14I	CCWWGG	3 cut(s)	471, 990, 1045
ErhI	CCWWGG	3 cut(s)	471, 990, 1045
Esp3I	CGTCTC	1 cut(s)	1189
FaqI	GGGAC	1 cut(s)	80
FblI	GTMKAC	2 cut(s)	60, 1089
Fnu4HI	GCNGC	7 cut(s)	103, 288, 615, 754, 891, 987, 1380
FokI	GGATG	4 cut(s)	95, 583, 790, 857
Fsp4HI	GCNGC	7 cut(s)	103, 288, 615, 754, 891, 987, 1380
FspBI	CTAG	3 cut(s)	501, 1094, 1422
GlaI	GCGC	1 cut(s)	302
GluI	GCNGC	7 cut(s)	103, 288, 615, 754, 891, 987, 1380
GsaI	CCCAGC	1 cut(s)	729
GsuI	CTGGAG	2 cut(s)	806, 1371
HaeIII	GGCC	5 cut(s)	105, 172, 436, 476, 912
HapII	CCGG	5 cut(s)	15, 122, 234, 432, 762
HhaI	GCGC	1 cut(s)	303
Hin6I	GCGC	1 cut(s)	301
HinP1I	GCGC	1 cut(s)	301
HincII	GTYRAC	2 cut(s)	61, 898
HindII	GTYRAC	2 cut(s)	61, 898
HinfI	GANTC	5 cut(s)	260, 368, 594, 747, 1015
HpaI	GTTAAC	1 cut(s)	898
HpaII	CCGG	5 cut(s)	15, 122, 234, 432, 762
HphI	GGTGA	2 cut(s)	776, 1135
Hpy166II	GTNNAC	3 cut(s)	61, 898, 1090
Hpy188I	TCNGA	4 cut(s)	593, 705, 877, 1119
Hpy188III	TCNNGA	6 cut(s)	181, 812, 823, 1012, 1106, 1126
Hpy8I	GTNNAC	3 cut(s)	61, 898, 1090
Hpy99I	CGWCG	2 cut(s)	62, 65
HpyAV	CCTTC	7 cut(s)	148, 255, 479, 902, 958, 1209, 1270
HpyCH4III	ACNGT	4 cut(s)	512, 709, 1139, 1219
HpyCH4IV	ACGT	4 cut(s)	90, 807, 1005, 1182
HpyCH4V	TGCA	8 cut(s)	149, 200, 279, 519, 719, 756, 1031, 1061
HpyF10VI	GCNNNNNNNGC	7 cut(s)	24, 230, 442, 611, 1006, 1346, 1379
HpyF3I	CTNAG	5 cut(s)	606, 618, 874, 1116, 1186
HpySE526I	ACGT	4 cut(s)	90, 807, 1005, 1182
HspAI	GCGC	1 cut(s)	301
KpnI	GGTACC	1 cut(s)	1233
KspAI	GTTAAC	1 cut(s)	898
Kzo9I	GATC	4 cut(s)	1108, 1174, 1301, 1418
LmnI	GCTCC	3 cut(s)	4, 542, 997
Lsp1109I	GCAGC	5 cut(s)	274, 740, 877, 998, 1366
LweI	GCATC	3 cut(s)	73, 757, 1250
MaeI	CTAG	3 cut(s)	501, 1094, 1422
MaeII	ACGT	4 cut(s)	90, 807, 1005, 1182
MaeIII	GTNAC	8 cut(s)	319, 409, 827, 863, 958, 1070, 1189, 1432
MalI	GATC	4 cut(s)	1110, 1176, 1303, 1420
MbiI	CCGCTC	1 cut(s)	614
MboI	GATC	4 cut(s)	1108, 1174, 1301, 1418
MboII	GAAGA	6 cut(s)	215, 465, 622, 650, 742, 1169
MfeI	CAATTG	2 cut(s)	399, 1032
MflI	RGATCY	3 cut(s)	1108, 1174, 1418
MhlI	GDGCHC	5 cut(s)	9, 122, 583, 1011, 1045
MlsI	TGGCCA	1 cut(s)	476
MluCI	AATT	4 cut(s)	399, 649, 1032, 1261
MluNI	TGGCCA	1 cut(s)	476
MlyI	GAGTC	2 cut(s)	269, 377
Mox20I	TGGCCA	1 cut(s)	476
MroXI	GAANNNNTTC	1 cut(s)	629
MscI	TGGCCA	1 cut(s)	476
MseI	TTAA	4 cut(s)	528, 897, 1002, 1395
MslI	CAYNNNNRTG	2 cut(s)	665, 1148
Msp20I	TGGCCA	1 cut(s)	476
MspI	CCGG	5 cut(s)	15, 122, 234, 432, 762
MspR9I	CCNGG	3 cut(s)	122, 433, 1299
MunI	CAATTG	2 cut(s)	399, 1032
MvaI	CCWGG	1 cut(s)	1299
MvnI	CGCG	1 cut(s)	303
MwoI	GCNNNNNNNGC	7 cut(s)	24, 230, 442, 611, 1006, 1346, 1379
NciI	CCSGG	2 cut(s)	122, 433
NcoI	CCATGG	1 cut(s)	471
NdeII	GATC	4 cut(s)	1108, 1174, 1301, 1418
NlaIV	GGNNCC	7 cut(s)	96, 126, 238, 1042, 1231, 1282, 1296
NmeAIII	GCCGAG	1 cut(s)	249
NmuCI	GTSAC	4 cut(s)	827, 958, 1189, 1432
NspI	RCATGY	1 cut(s)	1067
PaeR7I	CTCGAG	2 cut(s)	113, 257
PdmI	GAANNNNTTC	1 cut(s)	629
PfeI	GAWTC	3 cut(s)	594, 747, 1015
PinAI	ACCGGT	1 cut(s)	761
PkrI	GCNGC	7 cut(s)	104, 289, 616, 755, 892, 988, 1381
PleI	GAGTC	2 cut(s)	268, 376
PpsI	GAGTC	2 cut(s)	268, 376
Ppu21I	YACGTR	1 cut(s)	91
Psp1406I	AACGTT	1 cut(s)	807
Psp6I	CCWGG	1 cut(s)	1297
PspFI	CCCAGC	1 cut(s)	725
PspGI	CCWGG	1 cut(s)	1297
PspN4I	GGNNCC	7 cut(s)	96, 126, 238, 1042, 1231, 1282, 1296
PspPI	GGNCC	2 cut(s)	94, 434
PspXI	VCTCGAGB	2 cut(s)	113, 257
PstI	CTGCAG	2 cut(s)	202, 758
PstNI	CAGNNNCTG	1 cut(s)	725
PsuI	RGATCY	3 cut(s)	1108, 1174, 1418
RsaI	GTAC	5 cut(s)	505, 740, 760, 1231, 1412
RsaNI	GTAC	5 cut(s)	504, 739, 759, 1230, 1411
RseI	CAYNNNNRTG	2 cut(s)	665, 1148
SalI	GTCGAC	1 cut(s)	59
SaqAI	TTAA	4 cut(s)	528, 897, 1002, 1395
SatI	GCNGC	7 cut(s)	103, 288, 615, 754, 891, 987, 1380
Sau3AI	GATC	4 cut(s)	1108, 1174, 1301, 1418
Sau96I	GGNCC	2 cut(s)	94, 434
SchI	GAGTC	2 cut(s)	269, 377
ScrFI	CCNGG	3 cut(s)	122, 433, 1299
SduI	GDGCHC	5 cut(s)	9, 122, 583, 1011, 1045
SfaNI	GCATC	3 cut(s)	73, 757, 1250
SfcI	CTRYAG	2 cut(s)	198, 754
Sfr274I	CTCGAG	2 cut(s)	113, 257
SgrDI	CGTCGACG	1 cut(s)	59
SinI	GGWCC	1 cut(s)	94
SlaI	CTCGAG	2 cut(s)	113, 257
SmiMI	CAYNNNNRTG	2 cut(s)	665, 1148
SmlI	CTYRAG	3 cut(s)	113, 257, 1010
SmoI	CTYRAG	3 cut(s)	113, 257, 1010
Sse9I	AATT	4 cut(s)	399, 649, 1032, 1261
SsiI	CCGC	3 cut(s)	102, 614, 1449
SspMI	CTAG	3 cut(s)	501, 1094, 1422
StyD4I	CCNGG	3 cut(s)	120, 431, 1297
StyI	CCWWGG	3 cut(s)	471, 990, 1045
TaaI	ACNGT	4 cut(s)	512, 709, 1139, 1219
TaiI	ACGT	4 cut(s)	93, 810, 1008, 1185
TaqI	TCGA	5 cut(s)	60, 114, 180, 258, 1125
TasI	AATT	4 cut(s)	399, 649, 1032, 1261
TatI	WGTACW	2 cut(s)	738, 1410
TauI	GCSGC	2 cut(s)	105, 617
TfiI	GAWTC	3 cut(s)	594, 747, 1015
Tru1I	TTAA	4 cut(s)	528, 897, 1002, 1395
Tru9I	TTAA	4 cut(s)	528, 897, 1002, 1395
TscAI	CASTG	4 cut(s)	1105, 1142, 1194, 1441
TseFI	GTSAC	4 cut(s)	827, 958, 1189, 1432
TseI	GCWGC	5 cut(s)	287, 753, 890, 986, 1379
Tsp45I	GTSAC	4 cut(s)	827, 958, 1189, 1432
TspDTI	ATGAA	5 cut(s)	180, 237, 622, 794, 1421
TspRI	CASTG	4 cut(s)	1105, 1142, 1194, 1441
VpaK11BI	GGWCC	1 cut(s)	94
XapI	RAATTY	1 cut(s)	1261
XceI	RCATGY	1 cut(s)	1067
XhoI	CTCGAG	2 cut(s)	113, 257
XmiI	GTMKAC	2 cut(s)	60, 1089
XmnI	GAANNNNTTC	1 cut(s)	629
XspI	CTAG	3 cut(s)	501, 1094, 1422

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.