Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG255500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGAAGTCGGAAGGCGATCGGCGATGGAGCACAACAATACCAAAGCAAGCAAGCCTTTGAAAATGAAAGTGAAGTTCGTCGACGATGAAAAGGACGTCGTGAAGGCATCAGACGCCTTGCCTCTGCCTCTGTACCTGACCAATGTCCTGTTCTTCACTCTTTTCTTCTCCGTCGTCTACTTCTTGCTCACAAGCTGGCGTGAGAAGATCCGCACCAACACTCCTCTCCACATCATCAATCTCTCTGAGATCGTGGCTATTCTAGCCTTCGTAGCCTCCTTCATCTACCTCCTCGGGTTCTTTGGTATCGATTTCGTCCAATCCCTCATTCTCCAGCCCAGCAATGACATCTGGGCCGACCATGATGACGAGGAGATTATTCTCAAGGAGGATGCTCGCAAAGTTCCTTGTGGCCAGGCCCTCAATTGCTCAATTCCCAAAATGGCTCCTATTGCTTCACCTAAAGCTGCCCCAAAGGTGTTTGAGGAGAAGGCAATGATCGAGACCCCGCCAACAACTGAAGAAGACGAAGAGATCATCAAGGCAGTGGTTGCTGGAACCATTCCTTCATACTCACTCGAGACAAAGCTTGGCGATTGCAAGAGGGCAGCTTCTATTAGGCGTGAGGCTTTGCAGAGAGTTACAGGCAAGTCTCTTGAGGGTTTGCCATTGGACGGATTCGATTACGAGTCAATTTTGGGTCAATGCTGTGAGATGCCAGTCGGATATGTCACCATCCCTGTTGGAATTGCTGGCCCTATTATGCTCGATGGAAGAGAGTTCTCAATCCCCATGGCCACAACTGAAGGTTGCTTGGTGGCCAGTACCAACCGCGGTTGCAAAGCCATCAACCTGTCCGGTGGAGCTGCCAGTGTGCTGCTGAAAGATGGAATGACCAGAGCACCTGTTGTCAGATTCAACTCGGCTAAGAGAGCTGCTGAGTTGAAGTTCTTCATGGAAGACCCTGAGAATGCCGACACCATAGCCACCCTTTTCAACAAATCAAGCAGATTTGGTAGACTTCAATCAGTTAACTGTGCCGTTGCTGGGAAGAACCTGTACATGAGGTTCTGCTGCAGCACTGGTGATGCTATGGGGATGAACATGGTGTCTAAAGGTGTTCAAAACGTTCTCGATTTCCTACAGAGTGACTTCCCTGACATGGATGTCATTGGCATTTCTGGTAACTACTGCTCAGACAAGAAGCCTGCTGCTGTCAACTGGATCGAAGGCCGTGGCAAGTCTGTGGTCTGTGAGGCTGTGATCAAGGGAGACATAGTGACGAAGGTTTTGAAAACCAAGGTGGCGGCTTTGGTGGAGCTCAACATGCTCAAGAACCTTACTGGTTCCGCTATTGCTGGTGCTCTTGGTGGTTTCAATGCACATGCCAGTAACATTGTTTCGGCTGTGTACCTTGCCACTGGTCAAGACCCTGCTCAGAACATTGAGAGTTCTCACTGTATCACCATGATGGAAGCCATCAATGATGGCAAGGATCTTCACGTCTCTGTCACCATGCCGTCCATTGAGGTTGGTACCGTAGGAGGAGGGACCCAACTTGCATCCCAGTCAGCATGTTTGAACTTGCTTGGAGTGAAGGGTGCTAACAGAGAGGCACCAGGAGCGAACGCAAGGCAATTGGCCAGTGTTGTAGCTGCGTCGGTTCTTGCCGGAGAGCTTTCTCTTATGTCTGCTATCGCTGCTGGTCAGCTCGTTAGGAGCCACATGAAGTACAACCGATCCAGCAAAGATGTCTCAACAATGGTTTCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

591

Amino Acids

63.32

Weight (kDa)

6.24

Isoelectric Point (pI)

37.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	204 - 580	5.8e-145	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1166
AatII	GACGTC	1 cut(s)	99
Acc65I	GGTACC	1 cut(s)	1535
AccB1I	GGYRCC	2 cut(s)	1535, 1615
AccI	GTMKAC	3 cut(s)	81, 177, 1018
AccII	CGCG	1 cut(s)	834
AciI	CCGC	6 cut(s)	211, 509, 832, 834, 1307, 1350
AclI	AACGTT	1 cut(s)	1128
AclWI	GGATC	4 cut(s)	202, 1232, 1503, 1734
AcoI	YGGCCR	4 cut(s)	412, 795, 819, 1641
AcuI	CTGAAG	2 cut(s)	540, 825
AcyI	GRCGYC	2 cut(s)	96, 114
AfaI	GTAC	6 cut(s)	134, 826, 1061, 1412, 1537, 1733
AfiI	CCNNNNNNNGG	3 cut(s)	674, 1047, 1162
AgsI	TTSAA	9 cut(s)	61, 919, 946, 997, 1025, 1124, 1294, 1378, 1582
AjiI	CACGTC	1 cut(s)	1504
AjnI	CCWGG	2 cut(s)	414, 1618
AjuI	GAANNNNNNNTTGG	4 cut(s)	134, 166, 312, 344
Alw21I	GWGCWC	4 cut(s)	33, 904, 1323, 1366
Alw26I	GTCTC	6 cut(s)	497, 575, 657, 1266, 1510, 1759
AlwI	GGATC	4 cut(s)	202, 1232, 1503, 1734
Ama87I	CYCGRG	2 cut(s)	293, 578
AoxI	GGCC	8 cut(s)	354, 412, 417, 754, 795, 819, 1231, 1641
ArsI	GACNNNNNNTTYG	2 cut(s)	1273, 1305
Asp700I	GAANNNNTTC	1 cut(s)	950
Asp718I	GGTACC	1 cut(s)	1535
AspS9I	GGNCC	4 cut(s)	354, 418, 755, 1551
AsuHPI	GGTGA	5 cut(s)	450, 724, 1097, 1456, 1504
AvaI	CYCGRG	2 cut(s)	293, 578
AvaII	GGWCC	1 cut(s)	1551
BalI	TGGCCA	4 cut(s)	414, 797, 821, 1643
BanI	GGYRCC	2 cut(s)	1535, 1615
BanII	GRGCYC	1 cut(s)	1323
BarI	GAAGNNNNNNTAC	2 cut(s)	1043, 1075
BbsI	GAAGAC	2 cut(s)	531, 966
Bbv12I	GWGCWC	4 cut(s)	33, 904, 1323, 1366
BccI	CCATC	8 cut(s)	19, 743, 764, 854, 881, 1465, 1481, 1487
BceAI	ACGGC	3 cut(s)	1025, 1218, 1504
BciT130I	CCWGG	2 cut(s)	416, 1620
BclI	TGATCA	1 cut(s)	1263
BcoDI	GTCTC	6 cut(s)	497, 575, 657, 1266, 1510, 1759
BfaI	CTAG	1 cut(s)	263
BfmI	CTRYAG	2 cut(s)	1075, 1142
Bme1390I	CCNGG	2 cut(s)	416, 1620
Bme18I	GGWCC	1 cut(s)	1551
BmeT110I	CYCGRG	2 cut(s)	293, 578
BmgBI	CACGTC	1 cut(s)	1504
BmgT120I	GGNCC	4 cut(s)	354, 418, 755, 1551
BmiI	GGNNCC	8 cut(s)	447, 559, 1348, 1537, 1552, 1553, 1617, 1721
BmrFI	CCNGG	2 cut(s)	416, 1620
BmrI	ACTGGG	1 cut(s)	1561
BmsI	GCATC	5 cut(s)	116, 382, 705, 1078, 1571
BmuI	ACTGGG	1 cut(s)	1561
BoxI	GACNNNNGTC	1 cut(s)	143
BpiI	GAAGAC	2 cut(s)	531, 966
BpmI	CTGGAG	1 cut(s)	317
BpuEI	CTTGAG	3 cut(s)	368, 677, 1316
Bsa29I	ATCGAT	1 cut(s)	309
BsaHI	GRCGYC	2 cut(s)	96, 114
BsaI	GGTCTC	1 cut(s)	497
BsaJI	CCNNGG	5 cut(s)	292, 792, 832, 1234, 1299
BsaWI	WCCGGW	1 cut(s)	857
BsaXI	ACNNNNNCTCC	4 cut(s)	205, 235, 1263, 1293
Bsc4I	CCNNNNNNNGG	3 cut(s)	674, 1047, 1162
Bse3DI	GCAATG	2 cut(s)	349, 501
BseBI	CCWGG	2 cut(s)	416, 1620
BseCI	ATCGAT	1 cut(s)	309
BseDI	CCNNGG	5 cut(s)	292, 792, 832, 1234, 1299
BseGI	GGATG	5 cut(s)	397, 735, 1104, 1171, 1562
BseLI	CCNNNNNNNGG	3 cut(s)	674, 1047, 1162
BseMI	GCAATG	2 cut(s)	349, 501
BseMII	CTCAG	5 cut(s)	237, 930, 957, 1209, 1451
BseRI	GAGGAG	5 cut(s)	213, 281, 386, 500, 1560
BseYI	CCCAGC	2 cut(s)	338, 1046
Bsh1236I	CGCG	1 cut(s)	834
Bsh1285I	CGRYCG	1 cut(s)	20
BshFI	GGCC	8 cut(s)	356, 414, 419, 756, 797, 821, 1233, 1643
BshNI	GGYRCC	2 cut(s)	1535, 1615
BshVI	ATCGAT	1 cut(s)	309
BsiEI	CGRYCG	1 cut(s)	20
BsiHKAI	GWGCWC	4 cut(s)	33, 904, 1323, 1366
BsiHKCI	CYCGRG	2 cut(s)	293, 578
BsiSI	CCGG	2 cut(s)	858, 1671
BslFI	GGGAC	1 cut(s)	1564
BslI	CCNNNNNNNGG	3 cut(s)	674, 1047, 1162
BsmAI	GTCTC	6 cut(s)	497, 575, 657, 1266, 1510, 1759
BsmBI	CGTCTC	1 cut(s)	1510
BsmFI	GGGAC	1 cut(s)	1564
BsmI	GAATGC	1 cut(s)	976
BsnI	GGCC	8 cut(s)	356, 414, 419, 756, 797, 821, 1233, 1643
Bso31I	GGTCTC	1 cut(s)	497
BsoBI	CYCGRG	2 cut(s)	293, 578
Bsp1286I	GDGCHC	4 cut(s)	33, 904, 1323, 1366
Bsp1407I	TGTACA	1 cut(s)	1059
Bsp143I	GATC	9 cut(s)	17, 207, 249, 498, 534, 1224, 1263, 1495, 1739
Bsp19I	CCATGG	1 cut(s)	792
BspACI	CCGC	6 cut(s)	211, 509, 832, 834, 1307, 1350
BspANI	GGCC	8 cut(s)	356, 414, 419, 756, 797, 821, 1233, 1643
BspCNI	CTCAG	5 cut(s)	238, 931, 958, 1208, 1450
BspDI	ATCGAT	1 cut(s)	309
BspFNI	CGCG	1 cut(s)	834
BspLI	GGNNCC	8 cut(s)	447, 559, 1348, 1537, 1552, 1553, 1617, 1721
BspMAI	CTGCAG	1 cut(s)	1079
BspPI	GGATC	4 cut(s)	202, 1232, 1503, 1734
BspT107I	GGYRCC	2 cut(s)	1535, 1615
BspTNI	GGTCTC	1 cut(s)	497
BsrDI	GCAATG	2 cut(s)	349, 501
BsrGI	TGTACA	1 cut(s)	1059
BssECI	CCNNGG	5 cut(s)	292, 792, 832, 1234, 1299
BssMI	GATC	9 cut(s)	17, 207, 249, 498, 534, 1224, 1263, 1495, 1739
BssNI	GRCGYC	2 cut(s)	96, 114
BssT1I	CCWWGG	2 cut(s)	792, 1299
Bst2UI	CCWGG	2 cut(s)	416, 1620
Bst4CI	ACNGT	3 cut(s)	1037, 1460, 1540
Bst6I	CTCTTC	2 cut(s)	525, 769
BstACI	GRCGYC	2 cut(s)	96, 114
BstAPI	GCANNNNNTGC	1 cut(s)	551
BstAUI	TGTACA	1 cut(s)	1059
BstC8I	GCNNGC	6 cut(s)	49, 53, 197, 397, 754, 1209
BstDEI	CTNAG	6 cut(s)	246, 927, 939, 966, 1195, 1437
BstDSI	CCRYGG	3 cut(s)	792, 832, 1234
BstF5I	GGATG	5 cut(s)	397, 735, 1104, 1171, 1562
BstFNI	CGCG	1 cut(s)	834
BstKTI	GATC	9 cut(s)	20, 210, 252, 501, 537, 1227, 1266, 1498, 1742
BstMAI	GTCTC	6 cut(s)	497, 575, 657, 1266, 1510, 1759
BstMBI	GATC	9 cut(s)	17, 207, 249, 498, 534, 1224, 1263, 1495, 1739
BstMCI	CGRYCG	1 cut(s)	20
BstMWI	GCNNNNNNNGC	9 cut(s)	113, 263, 272, 452, 551, 932, 1327, 1622, 1700
BstNI	CCWGG	2 cut(s)	416, 1620
BstNSI	RCATGY	3 cut(s)	1330, 1388, 1578
BstPAI	GACNNNNGTC	1 cut(s)	143
BstSCI	CCNGG	2 cut(s)	414, 1618
BstSFI	CTRYAG	2 cut(s)	1075, 1142
BstUI	CGCG	1 cut(s)	834
BstV2I	GAAGAC	2 cut(s)	531, 966
BstX2I	RGATCY	2 cut(s)	207, 1495
BstYI	RGATCY	2 cut(s)	207, 1495
Bsu15I	ATCGAT	1 cut(s)	309
BsuRI	GGCC	8 cut(s)	356, 414, 419, 756, 797, 821, 1233, 1643
BsuTUI	ATCGAT	1 cut(s)	309
BtgI	CCRYGG	3 cut(s)	792, 832, 1234
BtgZI	GCGATG	1 cut(s)	38
BtrI	CACGTC	1 cut(s)	1504
BtsCI	GGATG	5 cut(s)	397, 735, 1104, 1171, 1562
BtsI	GCAGTG	1 cut(s)	552
BtsIMutI	CAGTG	6 cut(s)	552, 877, 1080, 1419, 1456, 1651
Cac8I	GCNNGC	6 cut(s)	49, 53, 197, 397, 754, 1209
Cfr13I	GGNCC	4 cut(s)	354, 418, 755, 1551
Cfr42I	CCGCGG	1 cut(s)	835
ClaI	ATCGAT	1 cut(s)	309
CseI	GACGC	2 cut(s)	122, 1647
Csp6I	GTAC	6 cut(s)	133, 825, 1060, 1411, 1536, 1732
CviQI	GTAC	6 cut(s)	133, 825, 1060, 1411, 1536, 1732
DdeI	CTNAG	6 cut(s)	246, 927, 939, 966, 1195, 1437
DpnI	GATC	9 cut(s)	19, 209, 251, 500, 536, 1226, 1265, 1497, 1741
DpnII	GATC	9 cut(s)	17, 207, 249, 498, 534, 1224, 1263, 1495, 1739
DrdI	GACNNNNNNGTC	1 cut(s)	1166
DseDI	GACNNNNNNGTC	1 cut(s)	1166
EaeI	YGGCCR	4 cut(s)	412, 795, 819, 1641
Eam1104I	CTCTTC	2 cut(s)	525, 769
EarI	CTCTTC	2 cut(s)	525, 769
Ecl136II	GAGCTC	1 cut(s)	1321
Eco130I	CCWWGG	2 cut(s)	792, 1299
Eco24I	GRGCYC	1 cut(s)	1323
Eco31I	GGTCTC	1 cut(s)	497
Eco47I	GGWCC	1 cut(s)	1551
Eco53kI	GAGCTC	1 cut(s)	1321
Eco57I	CTGAAG	2 cut(s)	540, 825
Eco88I	CYCGRG	2 cut(s)	293, 578
EcoICRI	GAGCTC	1 cut(s)	1321
EcoO109I	RGGNCCY	2 cut(s)	418, 1551
EcoRII	CCWGG	2 cut(s)	414, 1618
EcoT14I	CCWWGG	2 cut(s)	792, 1299
EcoT38I	GRGCYC	1 cut(s)	1323
ErhI	CCWWGG	2 cut(s)	792, 1299
Esp3I	CGTCTC	1 cut(s)	1510
FalI	AAGNNNNNCTT	2 cut(s)	40, 72
FaqI	GGGAC	1 cut(s)	1564
FauI	CCCGC	1 cut(s)	516
FbaI	TGATCA	1 cut(s)	1263
FblI	GTMKAC	3 cut(s)	81, 177, 1018
FokI	GGATG	5 cut(s)	404, 722, 1111, 1178, 1549
FriOI	GRGCYC	1 cut(s)	1323
FspBI	CTAG	1 cut(s)	263
GsaI	CCCAGC	2 cut(s)	342, 1050
GsuI	CTGGAG	1 cut(s)	317
HaeIII	GGCC	8 cut(s)	356, 414, 419, 756, 797, 821, 1233, 1643
HapII	CCGG	2 cut(s)	858, 1671
HgaI	GACGC	2 cut(s)	122, 1647
Hin1I	GRCGYC	2 cut(s)	96, 114
HincII	GTYRAC	3 cut(s)	82, 1033, 1219
HindII	GTYRAC	3 cut(s)	82, 1033, 1219
HindIII	AAGCTT	1 cut(s)	587
HinfI	GANTC	3 cut(s)	678, 689, 915
HpaI	GTTAAC	1 cut(s)	1033
HpaII	CCGG	2 cut(s)	858, 1671
HphI	GGTGA	5 cut(s)	450, 724, 1097, 1456, 1504
Hpy166II	GTNNAC	6 cut(s)	82, 178, 1019, 1033, 1219, 1411
Hpy188I	TCNGA	7 cut(s)	11, 112, 247, 725, 914, 1198, 1440
Hpy188III	TCNNGA	7 cut(s)	100, 502, 580, 656, 1133, 1333, 1427
Hpy8I	GTNNAC	6 cut(s)	82, 178, 1019, 1033, 1219, 1411
Hpy99I	CGWCG	5 cut(s)	83, 86, 101, 176, 1663
HpyCH4III	ACNGT	3 cut(s)	1037, 1460, 1540
HpyCH4IV	ACGT	3 cut(s)	96, 1128, 1503
HpyCH4V	TGCA	6 cut(s)	600, 634, 840, 1077, 1382, 1562
HpyF10VI	GCNNNNNNNGC	9 cut(s)	113, 263, 272, 452, 551, 932, 1327, 1622, 1700
HpyF3I	CTNAG	6 cut(s)	246, 927, 939, 966, 1195, 1437
HpySE526I	ACGT	3 cut(s)	96, 1128, 1503
Hsp92I	GRCGYC	2 cut(s)	96, 114
KflI	GGGWCCC	1 cut(s)	1551
KpnI	GGTACC	1 cut(s)	1539
Ksp22I	TGATCA	1 cut(s)	1263
KspAI	GTTAAC	1 cut(s)	1033
KspI	CCGCGG	1 cut(s)	835
Kzo9I	GATC	9 cut(s)	17, 207, 249, 498, 534, 1224, 1263, 1495, 1739
LmnI	GCTCC	6 cut(s)	28, 451, 863, 1318, 1622, 1719
LweI	GCATC	5 cut(s)	116, 382, 705, 1078, 1571
MaeI	CTAG	1 cut(s)	263
MaeII	ACGT	3 cut(s)	96, 1128, 1503
MaeIII	GTNAC	7 cut(s)	640, 730, 1148, 1184, 1279, 1391, 1510
MalI	GATC	9 cut(s)	19, 209, 251, 500, 536, 1226, 1265, 1497, 1741
MboI	GATC	9 cut(s)	17, 207, 249, 498, 534, 1224, 1263, 1495, 1739
MfeI	CAATTG	2 cut(s)	424, 1637
MflI	RGATCY	2 cut(s)	207, 1495
MhlI	GDGCHC	4 cut(s)	33, 904, 1323, 1366
MlsI	TGGCCA	4 cut(s)	414, 797, 821, 1643
MluCI	AATT	5 cut(s)	424, 432, 693, 747, 1637
MluNI	TGGCCA	4 cut(s)	414, 797, 821, 1643
MlyI	GAGTC	1 cut(s)	698
MmeI	TCCRAC	2 cut(s)	703, 724
Mox20I	TGGCCA	4 cut(s)	414, 797, 821, 1643
MroXI	GAANNNNTTC	1 cut(s)	950
MscI	TGGCCA	4 cut(s)	414, 797, 821, 1643
MseI	TTAA	2 cut(s)	1032, 1774
MslI	CAYNNNNRTG	1 cut(s)	1469
Msp20I	TGGCCA	4 cut(s)	414, 797, 821, 1643
MspA1I	CMGCKG	1 cut(s)	834
MspI	CCGG	2 cut(s)	858, 1671
MspR9I	CCNGG	2 cut(s)	416, 1620
MunI	CAATTG	2 cut(s)	424, 1637
Mva1269I	GAATGC	1 cut(s)	976
MvaI	CCWGG	2 cut(s)	416, 1620
MvnI	CGCG	1 cut(s)	834
MwoI	GCNNNNNNNGC	9 cut(s)	113, 263, 272, 452, 551, 932, 1327, 1622, 1700
NcoI	CCATGG	1 cut(s)	792
NdeII	GATC	9 cut(s)	17, 207, 249, 498, 534, 1224, 1263, 1495, 1739
NlaIV	GGNNCC	8 cut(s)	447, 559, 1348, 1537, 1552, 1553, 1617, 1721
NmeAIII	GCCGAG	1 cut(s)	902
NmuCI	GTSAC	4 cut(s)	730, 1148, 1279, 1510
NspI	RCATGY	3 cut(s)	1330, 1388, 1578
PaeR7I	CTCGAG	1 cut(s)	578
PctI	GAATGC	1 cut(s)	976
PdmI	GAANNNNTTC	1 cut(s)	950
PfeI	GAWTC	2 cut(s)	678, 915
Ple19I	CGATCG	1 cut(s)	20
PleI	GAGTC	1 cut(s)	697
PpsI	GAGTC	1 cut(s)	697
PpuMI	RGGWCCY	1 cut(s)	1551
PshAI	GACNNNNGTC	1 cut(s)	143
Psp124BI	GAGCTC	1 cut(s)	1323
Psp1406I	AACGTT	1 cut(s)	1128
Psp5II	RGGWCCY	1 cut(s)	1551
Psp6I	CCWGG	2 cut(s)	414, 1618
PspFI	CCCAGC	2 cut(s)	338, 1046
PspGI	CCWGG	2 cut(s)	414, 1618
PspN4I	GGNNCC	8 cut(s)	447, 559, 1348, 1537, 1552, 1553, 1617, 1721
PspPI	GGNCC	4 cut(s)	354, 418, 755, 1551
PspPPI	RGGWCCY	1 cut(s)	1551
PsrI	GAACNNNNNNTAC	2 cut(s)	1052, 1084
PstI	CTGCAG	1 cut(s)	1079
PsuI	RGATCY	2 cut(s)	207, 1495
PvuI	CGATCG	1 cut(s)	20
RsaI	GTAC	6 cut(s)	134, 826, 1061, 1412, 1537, 1733
RsaNI	GTAC	6 cut(s)	133, 825, 1060, 1411, 1536, 1732
RseI	CAYNNNNRTG	1 cut(s)	1469
SacI	GAGCTC	1 cut(s)	1323
SacII	CCGCGG	1 cut(s)	835
SalI	GTCGAC	1 cut(s)	80
SaqAI	TTAA	2 cut(s)	1032, 1774
Sau3AI	GATC	9 cut(s)	17, 207, 249, 498, 534, 1224, 1263, 1495, 1739
Sau96I	GGNCC	4 cut(s)	354, 418, 755, 1551
SchI	GAGTC	1 cut(s)	698
ScrFI	CCNGG	2 cut(s)	416, 1620
SduI	GDGCHC	4 cut(s)	33, 904, 1323, 1366
SfaNI	GCATC	5 cut(s)	116, 382, 705, 1078, 1571
SfcI	CTRYAG	2 cut(s)	1075, 1142
Sfr274I	CTCGAG	1 cut(s)	578
Sfr303I	CCGCGG	1 cut(s)	835
SgrBI	CCGCGG	1 cut(s)	835
SgrDI	CGTCGACG	1 cut(s)	80
SinI	GGWCC	1 cut(s)	1551
SlaI	CTCGAG	1 cut(s)	578
SmiMI	CAYNNNNRTG	1 cut(s)	1469
SmlI	CTYRAG	4 cut(s)	383, 578, 656, 1331
SmoI	CTYRAG	4 cut(s)	383, 578, 656, 1331
Sse9I	AATT	5 cut(s)	424, 432, 693, 747, 1637
SsiI	CCGC	6 cut(s)	211, 509, 832, 834, 1307, 1350
SspMI	CTAG	1 cut(s)	263
SstI	GAGCTC	1 cut(s)	1323
StyD4I	CCNGG	2 cut(s)	414, 1618
StyI	CCWWGG	2 cut(s)	792, 1299
TaaI	ACNGT	3 cut(s)	1037, 1460, 1540
TaiI	ACGT	3 cut(s)	99, 1131, 1506
TaqI	TCGA	8 cut(s)	81, 309, 501, 579, 681, 768, 1134, 1227
TasI	AATT	5 cut(s)	424, 432, 693, 747, 1637
TatI	WGTACW	2 cut(s)	1059, 1731
TauI	GCSGC	1 cut(s)	1310
TfiI	GAWTC	2 cut(s)	678, 915
Tru1I	TTAA	2 cut(s)	1032, 1774
Tru9I	TTAA	2 cut(s)	1032, 1774
TscAI	CASTG	6 cut(s)	552, 877, 1087, 1426, 1463, 1651
TseFI	GTSAC	4 cut(s)	730, 1148, 1279, 1510
Tsp45I	GTSAC	4 cut(s)	730, 1148, 1279, 1510
TspDTI	ATGAA	7 cut(s)	80, 102, 271, 558, 943, 1115, 1742
TspGWI	ACGGA	2 cut(s)	160, 690
TspRI	CASTG	6 cut(s)	552, 877, 1087, 1426, 1463, 1651
VpaK11BI	GGWCC	1 cut(s)	1551
XceI	RCATGY	3 cut(s)	1330, 1388, 1578
XhoI	CTCGAG	1 cut(s)	578
XmiI	GTMKAC	3 cut(s)	81, 177, 1018
XmnI	GAANNNNTTC	1 cut(s)	950
XspI	CTAG	1 cut(s)	263
ZraI	GACGTC	1 cut(s)	97

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.