Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Reverse (-)

43437453 .. 43439195

Gene Structure 1743 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G021910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGAGCACGGAGGAAAGCCCATGAAAATGAAAGTCAAGTTTGTCGACGATCAAGTCCCAAAGGCCTCAGCCTCAGACGCCATGTCTCTCCCTCTCTACATAACCAACGCTGTGTTTTTCACCCTCTTCTTCTCCGTTGTCTACTTCTTGCTCACTAGCTGGCGCGAGAAGATCCGTACCAACACTCCTCTTCACATCATTGATCTCTCTGAGATTGTTGCCATCCTTGCTCTTGTAGCCTCCTTCATCTATCTCCTCGGATTCTTCGGCATCGATTTTGTTCAGTCCCTCTTTCTCCAGCCCAGTAGTGACATCTGGGCCGCCGACGATGACGAGGAAGATATTATTCTCAAGGAGGATGCTCGTAAAGCTCCTTGCGGCCAGGCCCTTGATTGTTCAATTCCCAAAATTGCTCCAATTGCTTCACCTAAAGTTACCCAGAAGGTGTCTTATGAAAAGCCAGCGATCGAGATTCCACCACCGACTGCAGAAGACGAAGAGATTATCAAGGCCGTGGTTGCCGGAACCATTCCTTCATACTCACTTGAGTCAAAGCTCGGTGATTGCAAGAGAGCAGCTTCTATTAGGCGTGAGGCTTTGCAGAGAGTTACAGGCAAGTCTTTGGAGGGTTTGCCTTTGGAGGGCTTTGATTATGAGTCCATTTTGGGTCAATGCTGTGAAATGCCAGTTGGGTATATCACCATTCCTGTTGGGATTGCTGGGCCCCTTATGCTTGATGGAAAAGAGTTCTCTGTCCCCATGGCCACAACTGAAGGTTGCTTGGTGGCTAGTACCAACCGTGGTTGCAAGGCTATTAACTTGTCTGGTGGAGCTACCAGTGTGCTATTGAAAGATGGAATGACCAGAGCACCTGTTGTCAGATTCAACTCTGCTAAAAGAGCTGCTGAATTGAAGTTTTTCATGGAAGACCCTGCCAATTACGAAACCATTTCCATGGTCTTCAACAAATCAAGCCGATTCGGTAGACTTCAGACAGTCAAGTGTGCCGTTGCTGGGAAAAACCTGTACATGAGATTCTGCTGCAGCACCGGCGATGCTATGGGGATGAACATGGTCTCCAAAGGTGTTCAAAATGTCCTCGACTTCCTTCAGAATGACTTCCCTGACATGGATGTCATTGGCATCTCTGGTAACTACTGCTCAGACAAGAAGCCTGCTGCTGTCAACTGGATCGAAGGCCGTGGCAAATCTGTGGTGTGTGAGGCTGTGATCAAGGGAGACATAGTAAGTAAGGTGTTGAAAACCAACGTGGCGGCCCTGGTGGAGCTTAACATGCTCAAGAACCTTACTGGTTCTGCCATGGCTGGTGCTCTTGGTGGGTTTAATGCTCATGCCAGTAACATTGTTTCAGCTGTCTACCTCGCAACTGGCCAAGACCCTGCTCAGAACATCGAGAGTTCTCACTGCATCACCATGATGGAAGCCATCAATGATGGAAAGGATCTTCACGTCTCAGTGACCATGCCTTCTATTGAGGTCGGCACTGTAGGAGGAGGTACCCAACTTGCATCGCAGTCTGCTTGTTTGAACTTGCTTGGAGTGAAGGGAGCTAACAGAGAAGCACCAGGATCAAACGCAAGGCAGTTGGCCAGTGTTGTAGCTGGTTCTGTTCTTGCTGGAGAGCTATCTCTCATGTCTGCCATTGCAGCTGGACAGCTCGTCAAGAGTCACATGAAGTACAACCGATCGAACAAAGATGTTACAACTGTTGCTTCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

580

Amino Acids

61.86

Weight (kDa)

6.0

Isoelectric Point (pI)

33.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	193 - 569	1.1e-145	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	53, 1133
Acc65I	GGTACC	1 cut(s)	1517
AccB1I	GGYRCC	1 cut(s)	1517
AccI	GTMKAC	4 cut(s)	45, 141, 985, 1377
AccII	CGCG	1 cut(s)	165
AciI	CCGC	3 cut(s)	321, 378, 1274
AclWI	GGATC	4 cut(s)	166, 1199, 1470, 1597
AcoI	YGGCCR	4 cut(s)	379, 762, 1390, 1608
AcuI	CTGAAG	3 cut(s)	792, 974, 1094
AcyI	GRCGYC	1 cut(s)	78
AfaI	GTAC	5 cut(s)	178, 793, 1028, 1519, 1700
AfiI	CCNNNNNNNGG	3 cut(s)	641, 1014, 1129
AgsI	TTSAA	8 cut(s)	399, 850, 886, 913, 964, 1091, 1261, 1549
AhdI	GACNNNNNGTC	2 cut(s)	82, 1679
AjiI	CACGTC	1 cut(s)	1471
AjnI	CCWGG	3 cut(s)	381, 1278, 1585
AjuI	GAANNNNNNNTTGG	2 cut(s)	672, 704
AloI	GAACNNNNNNTCC	2 cut(s)	1061, 1093
Alw21I	GWGCWC	3 cut(s)	9, 871, 1333
Alw26I	GTCTC	4 cut(s)	90, 1081, 1233, 1477
AlwI	GGATC	4 cut(s)	166, 1199, 1470, 1597
ApaI	GGGCCC	1 cut(s)	726
ApeKI	GCWGC	6 cut(s)	575, 902, 1041, 1044, 1178, 1667
Asp700I	GAANNNNTTC	2 cut(s)	917, 1118
Asp718I	GGTACC	1 cut(s)	1517
AspLEI	GCGC	1 cut(s)	165
AspS9I	GGNCC	5 cut(s)	318, 385, 722, 723, 1276
AsuHPI	GGTGA	5 cut(s)	112, 417, 572, 691, 1423
BaeGI	GKGCMC	1 cut(s)	726
BalI	TGGCCA	3 cut(s)	764, 1392, 1610
BanI	GGYRCC	1 cut(s)	1517
BanII	GRGCYC	1 cut(s)	726
BbsI	GAAGAC	3 cut(s)	498, 933, 952
Bbv12I	GWGCWC	3 cut(s)	9, 871, 1333
BbvCI	CCTCAGC	1 cut(s)	67
BbvI	GCAGC	6 cut(s)	587, 889, 1028, 1056, 1165, 1679
BccI	CCATC	6 cut(s)	230, 731, 848, 1432, 1448, 1454
BceAI	ACGGC	3 cut(s)	497, 992, 1185
BciT130I	CCWGG	3 cut(s)	383, 1280, 1587
BclI	TGATCA	1 cut(s)	1230
BcoDI	GTCTC	4 cut(s)	90, 1081, 1233, 1477
BfaI	CTAG	2 cut(s)	156, 789
BfmI	CTRYAG	3 cut(s)	486, 1042, 1506
BisI	GCNGC	9 cut(s)	321, 379, 576, 903, 1042, 1045, 1179, 1275, 1668
BlsI	GCNGC	9 cut(s)	322, 380, 577, 904, 1043, 1046, 1180, 1276, 1669
Bme1390I	CCNGG	3 cut(s)	383, 1280, 1587
BmeRI	GACNNNNNGTC	2 cut(s)	82, 1679
BmgBI	CACGTC	1 cut(s)	1471
BmgT120I	GGNCC	5 cut(s)	318, 385, 722, 723, 1276
BmiI	GGNNCC	4 cut(s)	526, 724, 725, 1519
BmrFI	CCNGG	3 cut(s)	383, 1280, 1587
BmrI	ACTGGG	1 cut(s)	297
BmsI	GCATC	6 cut(s)	279, 349, 1045, 1152, 1437, 1538
BmuI	ACTGGG	1 cut(s)	297
BpiI	GAAGAC	3 cut(s)	498, 933, 952
BpmI	CTGGAG	2 cut(s)	281, 1659
Bpu10I	CCTNAGC	1 cut(s)	67
BpuEI	CTTGAG	3 cut(s)	335, 566, 1283
Bsa29I	ATCGAT	1 cut(s)	273
BsaHI	GRCGYC	1 cut(s)	78
BsaI	GGTCTC	1 cut(s)	1081
BsaJI	CCNNGG	8 cut(s)	256, 513, 759, 799, 954, 1201, 1278, 1320
BsaXI	ACNNNNNCTCC	6 cut(s)	169, 199, 1061, 1091, 1230, 1260
Bsc4I	CCNNNNNNNGG	3 cut(s)	641, 1014, 1129
Bse118I	RCCGGY	1 cut(s)	1049
Bse1I	ACTGG	8 cut(s)	303, 686, 837, 1193, 1315, 1356, 1393, 1611
Bse3DI	GCAATG	1 cut(s)	1662
BseBI	CCWGG	3 cut(s)	383, 1280, 1587
BseCI	ATCGAT	1 cut(s)	273
BseDI	CCNNGG	8 cut(s)	256, 513, 759, 799, 954, 1201, 1278, 1320
BseGI	GGATG	4 cut(s)	222, 364, 1071, 1138
BseLI	CCNNNNNNNGG	3 cut(s)	641, 1014, 1129
BseMI	GCAATG	1 cut(s)	1662
BseMII	CTCAG	6 cut(s)	81, 87, 201, 1176, 1418, 1488
BseNI	ACTGG	8 cut(s)	303, 686, 837, 1193, 1315, 1356, 1393, 1611
BseRI	GAGGAG	3 cut(s)	177, 245, 1527
BseSI	GKGCMC	1 cut(s)	726
BseXI	GCAGC	6 cut(s)	587, 889, 1028, 1056, 1165, 1679
BseYI	CCCAGC	2 cut(s)	719, 1013
Bsh1236I	CGCG	1 cut(s)	165
Bsh1285I	CGRYCG	2 cut(s)	468, 1709
BshNI	GGYRCC	1 cut(s)	1517
BshVI	ATCGAT	1 cut(s)	273
BsiEI	CGRYCG	2 cut(s)	468, 1709
BsiHKAI	GWGCWC	3 cut(s)	9, 871, 1333
BsiSI	CCGG	2 cut(s)	522, 1050
BslFI	GGGAC	3 cut(s)	41, 271, 740
BslI	CCNNNNNNNGG	3 cut(s)	641, 1014, 1129
BsmAI	GTCTC	4 cut(s)	90, 1081, 1233, 1477
BsmBI	CGTCTC	1 cut(s)	1477
BsmFI	GGGAC	3 cut(s)	41, 271, 740
Bso31I	GGTCTC	1 cut(s)	1081
Bsp120I	GGGCCC	1 cut(s)	722
Bsp1286I	GDGCHC	4 cut(s)	9, 726, 871, 1333
Bsp1407I	TGTACA	1 cut(s)	1026
Bsp143I	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
Bsp19I	CCATGG	3 cut(s)	759, 954, 1320
BspACI	CCGC	3 cut(s)	321, 378, 1274
BspCNI	CTCAG	6 cut(s)	80, 86, 202, 1175, 1417, 1487
BspDI	ATCGAT	1 cut(s)	273
BspFNI	CGCG	1 cut(s)	165
BspLI	GGNNCC	4 cut(s)	526, 724, 725, 1519
BspMAI	CTGCAG	2 cut(s)	490, 1046
BspPI	GGATC	4 cut(s)	166, 1199, 1470, 1597
BspT107I	GGYRCC	1 cut(s)	1517
BspTNI	GGTCTC	1 cut(s)	1081
BsrDI	GCAATG	1 cut(s)	1662
BsrFI	RCCGGY	1 cut(s)	1049
BsrGI	TGTACA	1 cut(s)	1026
BsrI	ACTGG	8 cut(s)	303, 686, 837, 1193, 1315, 1356, 1393, 1611
BssAI	RCCGGY	1 cut(s)	1049
BssECI	CCNNGG	8 cut(s)	256, 513, 759, 799, 954, 1201, 1278, 1320
BssMI	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
BssNI	GRCGYC	1 cut(s)	78
BssT1I	CCWWGG	3 cut(s)	759, 954, 1320
Bst2UI	CCWGG	3 cut(s)	383, 1280, 1587
Bst4CI	ACNGT	4 cut(s)	800, 997, 1507, 1729
Bst6I	CTCTTC	3 cut(s)	131, 195, 492
BstACI	GRCGYC	1 cut(s)	78
BstAUI	TGTACA	1 cut(s)	1026
BstC8I	GCNNGC	3 cut(s)	161, 462, 1176
BstDEI	CTNAG	6 cut(s)	67, 73, 210, 1162, 1404, 1474
BstDSI	CCRYGG	6 cut(s)	513, 759, 799, 954, 1201, 1320
BstF5I	GGATG	4 cut(s)	222, 364, 1071, 1138
BstFNI	CGCG	1 cut(s)	165
BstHHI	GCGC	1 cut(s)	165
BstKTI	GATC	9 cut(s)	52, 174, 205, 468, 1194, 1233, 1465, 1592, 1709
BstMAI	GTCTC	4 cut(s)	90, 1081, 1233, 1477
BstMBI	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
BstMCI	CGRYCG	2 cut(s)	468, 1709
BstNI	CCWGG	3 cut(s)	383, 1280, 1587
BstNSI	RCATGY	1 cut(s)	1297
BstSCI	CCNGG	3 cut(s)	381, 1278, 1585
BstSFI	CTRYAG	3 cut(s)	486, 1042, 1506
BstSLI	GKGCMC	1 cut(s)	726
BstUI	CGCG	1 cut(s)	165
BstV1I	GCAGC	6 cut(s)	587, 889, 1028, 1056, 1165, 1679
BstV2I	GAAGAC	3 cut(s)	498, 933, 952
BstX2I	RGATCY	2 cut(s)	171, 1462
BstXI	CCANNNNNNTGG	1 cut(s)	955
BstYI	RGATCY	2 cut(s)	171, 1462
Bsu15I	ATCGAT	1 cut(s)	273
BsuTUI	ATCGAT	1 cut(s)	273
BtgI	CCRYGG	6 cut(s)	513, 759, 799, 954, 1201, 1320
BtgZI	GCGATG	2 cut(s)	1068, 1515
BtrI	CACGTC	1 cut(s)	1471
BtsCI	GGATG	4 cut(s)	222, 364, 1071, 1138
BtsI	GCAGTG	1 cut(s)	1423
BtsIMutI	CAGTG	5 cut(s)	844, 1423, 1482, 1503, 1618
Cac8I	GCNNGC	3 cut(s)	161, 462, 1176
CfoI	GCGC	1 cut(s)	165
Cfr10I	RCCGGY	1 cut(s)	1049
Cfr13I	GGNCC	5 cut(s)	318, 385, 722, 723, 1276
ClaI	ATCGAT	1 cut(s)	273
CseI	GACGC	1 cut(s)	86
Csp6I	GTAC	5 cut(s)	177, 792, 1027, 1518, 1699
CviQI	GTAC	5 cut(s)	177, 792, 1027, 1518, 1699
DdeI	CTNAG	6 cut(s)	67, 73, 210, 1162, 1404, 1474
DpnI	GATC	9 cut(s)	51, 173, 204, 467, 1193, 1232, 1464, 1591, 1708
DpnII	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
DrdI	GACNNNNNNGTC	2 cut(s)	53, 1133
DriI	GACNNNNNGTC	2 cut(s)	82, 1679
DseDI	GACNNNNNNGTC	2 cut(s)	53, 1133
EaeI	YGGCCR	4 cut(s)	379, 762, 1390, 1608
Eam1104I	CTCTTC	3 cut(s)	131, 195, 492
Eam1105I	GACNNNNNGTC	2 cut(s)	82, 1679
EarI	CTCTTC	3 cut(s)	131, 195, 492
Eco130I	CCWWGG	3 cut(s)	759, 954, 1320
Eco147I	AGGCCT	1 cut(s)	65
Eco24I	GRGCYC	1 cut(s)	726
Eco31I	GGTCTC	1 cut(s)	1081
Eco57I	CTGAAG	3 cut(s)	792, 974, 1094
EcoO109I	RGGNCCY	2 cut(s)	385, 723
EcoRII	CCWGG	3 cut(s)	381, 1278, 1585
EcoT14I	CCWWGG	3 cut(s)	759, 954, 1320
EcoT38I	GRGCYC	1 cut(s)	726
ErhI	CCWWGG	3 cut(s)	759, 954, 1320
Esp3I	CGTCTC	1 cut(s)	1477
FaqI	GGGAC	3 cut(s)	41, 271, 740
FbaI	TGATCA	1 cut(s)	1230
FblI	GTMKAC	4 cut(s)	45, 141, 985, 1377
Fnu4HI	GCNGC	9 cut(s)	321, 379, 576, 903, 1042, 1045, 1179, 1275, 1668
FokI	GGATG	4 cut(s)	209, 371, 1078, 1145
FriOI	GRGCYC	1 cut(s)	726
Fsp4HI	GCNGC	9 cut(s)	321, 379, 576, 903, 1042, 1045, 1179, 1275, 1668
FspBI	CTAG	2 cut(s)	156, 789
GlaI	GCGC	1 cut(s)	164
GluI	GCNGC	9 cut(s)	321, 379, 576, 903, 1042, 1045, 1179, 1275, 1668
GsaI	CCCAGC	2 cut(s)	723, 1017
GsuI	CTGGAG	2 cut(s)	281, 1659
HapII	CCGG	2 cut(s)	522, 1050
HgaI	GACGC	1 cut(s)	86
HhaI	GCGC	1 cut(s)	165
Hin1I	GRCGYC	1 cut(s)	78
Hin6I	GCGC	1 cut(s)	163
HinP1I	GCGC	1 cut(s)	163
HincII	GTYRAC	2 cut(s)	46, 1186
HindII	GTYRAC	2 cut(s)	46, 1186
HinfI	GANTC	8 cut(s)	261, 472, 548, 656, 882, 978, 1035, 1687
HpaII	CCGG	2 cut(s)	522, 1050
HphI	GGTGA	5 cut(s)	112, 417, 572, 691, 1423
Hpy166II	GTNNAC	5 cut(s)	46, 142, 986, 1186, 1378
Hpy188I	TCNGA	8 cut(s)	76, 211, 260, 881, 993, 1113, 1165, 1407
Hpy188III	TCNNGA	4 cut(s)	469, 1300, 1414, 1684
Hpy8I	GTNNAC	5 cut(s)	46, 142, 986, 1186, 1378
Hpy99I	CGWCG	2 cut(s)	50, 329
HpyAV	CCTTC	8 cut(s)	253, 436, 543, 767, 1118, 1190, 1497, 1558
HpyCH4III	ACNGT	4 cut(s)	800, 997, 1507, 1729
HpyCH4IV	ACGT	2 cut(s)	1269, 1470
HpyCH4V	TGCA	8 cut(s)	488, 567, 601, 807, 1044, 1428, 1529, 1667
HpyF3I	CTNAG	6 cut(s)	67, 73, 210, 1162, 1404, 1474
HpySE526I	ACGT	2 cut(s)	1269, 1470
Hsp92I	GRCGYC	1 cut(s)	78
HspAI	GCGC	1 cut(s)	163
KpnI	GGTACC	1 cut(s)	1521
Ksp22I	TGATCA	1 cut(s)	1230
Kzo9I	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
LmnI	GCTCC	6 cut(s)	4, 376, 418, 830, 1285, 1568
Lsp1109I	GCAGC	6 cut(s)	587, 889, 1028, 1056, 1165, 1679
LweI	GCATC	6 cut(s)	279, 349, 1045, 1152, 1437, 1538
MaeI	CTAG	2 cut(s)	156, 789
MaeII	ACGT	2 cut(s)	1269, 1470
MaeIII	GTNAC	8 cut(s)	308, 433, 607, 1151, 1358, 1477, 1688, 1720
MalI	GATC	9 cut(s)	51, 173, 204, 467, 1193, 1232, 1464, 1591, 1708
MboI	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
MfeI	CAATTG	1 cut(s)	417
MflI	RGATCY	2 cut(s)	171, 1462
MhlI	GDGCHC	4 cut(s)	9, 726, 871, 1333
MlsI	TGGCCA	3 cut(s)	764, 1392, 1610
MluCI	AATT	5 cut(s)	399, 408, 417, 908, 937
MluNI	TGGCCA	3 cut(s)	764, 1392, 1610
MlyI	GAGTC	3 cut(s)	557, 665, 1696
Mox20I	TGGCCA	3 cut(s)	764, 1392, 1610
MroXI	GAANNNNTTC	2 cut(s)	917, 1118
MscI	TGGCCA	3 cut(s)	764, 1392, 1610
MseI	TTAA	4 cut(s)	816, 1290, 1344, 1741
MslI	CAYNNNNRTG	4 cut(s)	26, 953, 1433, 1436
Msp20I	TGGCCA	3 cut(s)	764, 1392, 1610
MspA1I	CMGCKG	2 cut(s)	1373, 1670
MspI	CCGG	2 cut(s)	522, 1050
MspR9I	CCNGG	3 cut(s)	383, 1280, 1587
MunI	CAATTG	1 cut(s)	417
MvaI	CCWGG	3 cut(s)	383, 1280, 1587
MvnI	CGCG	1 cut(s)	165
NcoI	CCATGG	3 cut(s)	759, 954, 1320
NdeII	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
NlaIV	GGNNCC	4 cut(s)	526, 724, 725, 1519
NmuCI	GTSAC	3 cut(s)	308, 1477, 1688
NspI	RCATGY	1 cut(s)	1297
PceI	AGGCCT	1 cut(s)	65
PdmI	GAANNNNTTC	2 cut(s)	917, 1118
PfeI	GAWTC	5 cut(s)	261, 472, 882, 978, 1035
PkrI	GCNGC	9 cut(s)	322, 380, 577, 904, 1043, 1046, 1180, 1276, 1669
Ple19I	CGATCG	2 cut(s)	468, 1709
PleI	GAGTC	3 cut(s)	556, 664, 1695
PpsI	GAGTC	3 cut(s)	556, 664, 1695
Psp6I	CCWGG	3 cut(s)	381, 1278, 1585
PspFI	CCCAGC	2 cut(s)	719, 1013
PspGI	CCWGG	3 cut(s)	381, 1278, 1585
PspN4I	GGNNCC	4 cut(s)	526, 724, 725, 1519
PspOMI	GGGCCC	1 cut(s)	722
PspPI	GGNCC	5 cut(s)	318, 385, 722, 723, 1276
PstI	CTGCAG	2 cut(s)	490, 1046
PsuI	RGATCY	2 cut(s)	171, 1462
PvuI	CGATCG	2 cut(s)	468, 1709
PvuII	CAGCTG	2 cut(s)	1373, 1670
RsaI	GTAC	5 cut(s)	178, 793, 1028, 1519, 1700
RsaNI	GTAC	5 cut(s)	177, 792, 1027, 1518, 1699
RseI	CAYNNNNRTG	4 cut(s)	26, 953, 1433, 1436
SalI	GTCGAC	1 cut(s)	44
SaqAI	TTAA	4 cut(s)	816, 1290, 1344, 1741
SatI	GCNGC	9 cut(s)	321, 379, 576, 903, 1042, 1045, 1179, 1275, 1668
Sau3AI	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
Sau96I	GGNCC	5 cut(s)	318, 385, 722, 723, 1276
SchI	GAGTC	3 cut(s)	557, 665, 1696
ScrFI	CCNGG	3 cut(s)	383, 1280, 1587
SduI	GDGCHC	4 cut(s)	9, 726, 871, 1333
SfaNI	GCATC	6 cut(s)	279, 349, 1045, 1152, 1437, 1538
SfcI	CTRYAG	3 cut(s)	486, 1042, 1506
SgrAI	CRCCGGYG	1 cut(s)	1049
SmiMI	CAYNNNNRTG	4 cut(s)	26, 953, 1433, 1436
SmlI	CTYRAG	3 cut(s)	350, 545, 1298
SmoI	CTYRAG	3 cut(s)	350, 545, 1298
Sse9I	AATT	5 cut(s)	399, 408, 417, 908, 937
SseBI	AGGCCT	1 cut(s)	65
SsiI	CCGC	3 cut(s)	321, 378, 1274
SspMI	CTAG	2 cut(s)	156, 789
StuI	AGGCCT	1 cut(s)	65
StyD4I	CCNGG	3 cut(s)	381, 1278, 1585
StyI	CCWWGG	3 cut(s)	759, 954, 1320
TaaI	ACNGT	4 cut(s)	800, 997, 1507, 1729
TaiI	ACGT	2 cut(s)	1272, 1473
TaqI	TCGA	7 cut(s)	45, 273, 468, 1101, 1194, 1413, 1709
TasI	AATT	5 cut(s)	399, 408, 417, 908, 937
TatI	WGTACW	2 cut(s)	1026, 1698
TauI	GCSGC	3 cut(s)	323, 381, 1277
TfiI	GAWTC	5 cut(s)	261, 472, 882, 978, 1035
Tru1I	TTAA	4 cut(s)	816, 1290, 1344, 1741
Tru9I	TTAA	4 cut(s)	816, 1290, 1344, 1741
TscAI	CASTG	5 cut(s)	844, 1430, 1482, 1510, 1618
TseFI	GTSAC	3 cut(s)	308, 1477, 1688
TseI	GCWGC	6 cut(s)	575, 902, 1041, 1044, 1178, 1667
Tsp45I	GTSAC	3 cut(s)	308, 1477, 1688
TspDTI	ATGAA	8 cut(s)	38, 44, 235, 468, 525, 910, 1082, 1709
TspGWI	ACGGA	3 cut(s)	24, 124, 164
TspRI	CASTG	5 cut(s)	844, 1430, 1482, 1510, 1618
XceI	RCATGY	1 cut(s)	1297
XmiI	GTMKAC	4 cut(s)	45, 141, 985, 1377
XmnI	GAANNNNTTC	2 cut(s)	917, 1118
XspI	CTAG	2 cut(s)	156, 789

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.