Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Forward (+)

43495432 .. 43497752

Gene Structure 2321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG247600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGAAGTCGGAAGGCTATCGGCGACGGAGCACAACAATACCAAAGCAAGCAAGCCTTTGAAAATGAAAGTGAAGTTCGTCGACTATGAAAAGGACGTCGTGAAGGCATCAGACGCCTTGCCTCTGCCTCTGTACCTGACCAATGCCCTGTTCTTCACTCTTTTCTTCTCCGTCGTCTACTTCTTGCTCACAAGCTGGCGTGAGAAGATCCGCACCAACACTCCTCTCCACATCATCAATCTCTCTGAGATCGTGGCTATTCTAGCCTTCGTAGCCTCCTTCATCTACCTCCTCGGGTTCTTTGGTATCGATTTCGTCCAATCCCTCATTCTCCAGCCCAGCAATGACATCTGGGCCGACCATGATGACGAGGAGATTATTCTCAAGGACGATGCTCGCAAAGTTCCTTGTGGCCAGGCCCTCAATTGCTCAATTCCCAAAATGGCTCCTATTGCTTCACCTAAAGCTGCTCCTGAAGCTGCCCCAAAGGTGTTTGAGGAGAAGGCAATGATCGAGACCCCGCCAACAGCTGAAGAAGACGAAGAGATCATCAAGGCAGTGGTTGCTGGAACCATTCCTTCATACTCACTCGAGACAAAGCTTGGCGATTGCAAGAGGGCAGCTTCTATTAGGCGTGAGGCTTTACAAAGAGTTACTGGCAAGTCTCTAGAGGGTTTGCCATTGGAGGGGTTCGATTACGAGTCCATTTTGGGTCAATGCTGTGAAATGCCAGTTGGATATATTACCATTCCTGTTGGGATTGCTGGGCCTCTTATGCTCGATGGAAAAGAGTTCTCAGTTCCCATGGCCACAACTGAAGGTTGCTTGGTGGCTAGTACCAACCGTGGTTGCAAAGCTATCAACTTGTCTGGTGGAGCTTCCAGTGTTCTTTTGAAAGATGGAATGACCAGAGCTCCTGTTGTCAGATTCAACTCTGCCAAAAGAGCTGCTGAATTGAAGTTTTTCATGGAAGACCCCGACAACTACGAAACCATCTCTATGGTCTTCAACAAATCTAGCAGATTTGGTAGACTGCAATCAGTTAAGTGTGCCGTTGCTGGGAAGAACCTGTACATGAGGTTCTGCTGCAGCACTGGTGATGCTATGGGGATGAATATGGTCTCTAAAGGCGTTCAAAACGTTCTTGATTTCCTCCAGAATGACTTCCCTGACATGGATGTCATTGGCATTTCTGGTAACTACTGCTCAGACAAGAAACCTGCTGCCGTGAACTGGATCGAAGGTCGGGGTAAATCTGTGGTTTGCGAGGCTGTTATCAAGGGAGACATAGTGTCGAAGGTGTTGAAAACCAACGTCGCAGCCTTGGTGGAACTTAACATGCTCAAGAACCTTACAGGATCCGCTATCGCTGGTGCTCTTGGTGGTTTCAATGCACATGCCAGTAACATTGTTTCAGCTGTCTACCTCGCCACTGGTCAAGACCCGGCTCAAAATATTGAGAGTTCTCACTGTATCACCATGATGGAAGCCATCAATGATGGCAAGGATCTTCACGTCTCTGTCACCATGCCGTCCATTGAGGTCGGTACAGTAGGAGGAGGGACTCAACTTGCATCTCAATCAGCTTGTCTGAACCTGCTTGGTGTGAAGGGTGCTAACAGAGAGGCACCGGGAACAAACGCAAGACAGTTGGCCAGCGTTGTAGCTGGTTCTGTTCTTGCCGGAGAGCTATCTCTCATGTCTGCAATTGCTGCTGGACAACTCGTTAAGAGCCACATGAAGTACAACAGATCTAACAAAGATGTCACAACGGTTGCTTCCGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

595

Amino Acids

63.7

Weight (kDa)

6.08

Isoelectric Point (pI)

34.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	208 - 584	9.8e-146	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1178
AatII	GACGTC	1 cut(s)	99
Acc36I	ACCTGC	2 cut(s)	1228, 1605
AccB1I	GGYRCC	1 cut(s)	1627
AccI	GTMKAC	4 cut(s)	81, 177, 1030, 1422
AciI	CCGC	4 cut(s)	211, 521, 1362, 1782
AclI	AACGTT	1 cut(s)	1140
AclWI	GGATC	5 cut(s)	202, 1244, 1353, 1366, 1515
AcoI	YGGCCR	3 cut(s)	412, 807, 1653
AcuI	CTGAAG	3 cut(s)	495, 552, 837
AcyI	GRCGYC	2 cut(s)	96, 114
AfaI	GTAC	5 cut(s)	134, 838, 1073, 1549, 1745
AfiI	CCNNNNNNNGG	4 cut(s)	686, 1059, 1174, 1233
AgsI	TTSAA	8 cut(s)	61, 895, 931, 958, 1009, 1136, 1306, 1390
AhdI	GACNNNNNGTC	1 cut(s)	1291
AjiI	CACGTC	1 cut(s)	1516
AjnI	CCWGG	1 cut(s)	414
AjuI	GAANNNNNNNTTGG	6 cut(s)	134, 166, 312, 344, 717, 749
Alw21I	GWGCWC	3 cut(s)	33, 916, 1378
Alw26I	GTCTC	6 cut(s)	509, 587, 669, 1126, 1278, 1522
AlwI	GGATC	5 cut(s)	202, 1244, 1353, 1366, 1515
Ama87I	CYCGRG	2 cut(s)	293, 590
AoxI	GGCC	6 cut(s)	354, 412, 417, 767, 807, 1653
ApeKI	GCWGC	9 cut(s)	467, 479, 620, 947, 1086, 1089, 1223, 1319, 1712
Asp700I	GAANNNNTTC	2 cut(s)	962, 1163
AspS9I	GGNCC	3 cut(s)	354, 418, 767
AsuC2I	CCSGG	2 cut(s)	1445, 1632
AsuHPI	GGTGA	4 cut(s)	450, 1109, 1468, 1516
AvaI	CYCGRG	2 cut(s)	293, 590
BalI	TGGCCA	3 cut(s)	414, 809, 1655
BamHI	GGATCC	1 cut(s)	1358
BanI	GGYRCC	1 cut(s)	1627
BanII	GRGCYC	1 cut(s)	916
BarI	GAAGNNNNNNTAC	2 cut(s)	1055, 1087
BbsI	GAAGAC	3 cut(s)	543, 978, 997
Bbv12I	GWGCWC	3 cut(s)	33, 916, 1378
BbvI	GCAGC	9 cut(s)	454, 466, 632, 934, 1073, 1101, 1210, 1331, 1699
BccI	CCATC	6 cut(s)	776, 893, 1001, 1477, 1493, 1499
BceAI	ACGGC	3 cut(s)	1037, 1211, 1516
BciT130I	CCWGG	1 cut(s)	416
BcnI	CCSGG	2 cut(s)	1445, 1632
BcoDI	GTCTC	6 cut(s)	509, 587, 669, 1126, 1278, 1522
BfaI	CTAG	4 cut(s)	263, 668, 834, 1017
BfmI	CTRYAG	1 cut(s)	1087
BfuAI	ACCTGC	2 cut(s)	1228, 1605
BglII	AGATCT	1 cut(s)	1751
BisI	GCNGC	9 cut(s)	468, 480, 621, 948, 1087, 1090, 1224, 1320, 1713
BlsI	GCNGC	9 cut(s)	469, 481, 622, 949, 1088, 1091, 1225, 1321, 1714
Bme1390I	CCNGG	3 cut(s)	416, 1445, 1632
BmeRI	GACNNNNNGTC	1 cut(s)	1291
BmeT110I	CYCGRG	2 cut(s)	293, 590
BmgBI	CACGTC	1 cut(s)	1516
BmgT120I	GGNCC	3 cut(s)	354, 418, 767
BmiI	GGNNCC	4 cut(s)	447, 571, 1360, 1629
BmrFI	CCNGG	3 cut(s)	416, 1445, 1632
BmsI	GCATC	4 cut(s)	116, 382, 1090, 1583
BpiI	GAAGAC	3 cut(s)	543, 978, 997
BpmI	CTGGAG	2 cut(s)	317, 1139
BpuEI	CTTGAG	2 cut(s)	368, 1328
BpuMI	CCSGG	2 cut(s)	1445, 1632
Bsa29I	ATCGAT	1 cut(s)	309
BsaHI	GRCGYC	2 cut(s)	96, 114
BsaI	GGTCTC	2 cut(s)	509, 1126
BsaJI	CCNNGG	4 cut(s)	292, 804, 844, 1323
BsaXI	ACNNNNNCTCC	6 cut(s)	205, 235, 898, 928, 1275, 1305
Bsc4I	CCNNNNNNNGG	4 cut(s)	686, 1059, 1174, 1233
Bse1I	ACTGG	7 cut(s)	661, 731, 882, 1099, 1238, 1401, 1438
Bse3DI	GCAATG	2 cut(s)	349, 513
BseBI	CCWGG	1 cut(s)	416
BseCI	ATCGAT	1 cut(s)	309
BseDI	CCNNGG	4 cut(s)	292, 804, 844, 1323
BseGI	GGATG	2 cut(s)	1116, 1183
BseLI	CCNNNNNNNGG	4 cut(s)	686, 1059, 1174, 1233
BseMI	GCAATG	2 cut(s)	349, 513
BseMII	CTCAG	3 cut(s)	237, 810, 1221
BseNI	ACTGG	7 cut(s)	661, 731, 882, 1099, 1238, 1401, 1438
BseRI	GAGGAG	5 cut(s)	213, 281, 386, 512, 1572
BseXI	GCAGC	9 cut(s)	454, 466, 632, 934, 1073, 1101, 1210, 1331, 1699
BseYI	CCCAGC	3 cut(s)	338, 764, 1058
BshFI	GGCC	6 cut(s)	356, 414, 419, 769, 809, 1655
BshNI	GGYRCC	1 cut(s)	1627
BshVI	ATCGAT	1 cut(s)	309
BsiHKAI	GWGCWC	3 cut(s)	33, 916, 1378
BsiHKCI	CYCGRG	2 cut(s)	293, 590
BsiSI	CCGG	3 cut(s)	1445, 1631, 1683
BslFI	GGGAC	1 cut(s)	1576
BslI	CCNNNNNNNGG	4 cut(s)	686, 1059, 1174, 1233
BsmAI	GTCTC	6 cut(s)	509, 587, 669, 1126, 1278, 1522
BsmBI	CGTCTC	1 cut(s)	1522
BsmFI	GGGAC	1 cut(s)	1576
BsnI	GGCC	6 cut(s)	356, 414, 419, 769, 809, 1655
Bso31I	GGTCTC	2 cut(s)	509, 1126
BsoBI	CYCGRG	2 cut(s)	293, 590
Bsp1286I	GDGCHC	3 cut(s)	33, 916, 1378
Bsp1407I	TGTACA	1 cut(s)	1071
Bsp143I	GATC	8 cut(s)	207, 249, 510, 546, 1236, 1358, 1507, 1751
Bsp19I	CCATGG	1 cut(s)	804
BspACI	CCGC	4 cut(s)	211, 521, 1362, 1782
BspANI	GGCC	6 cut(s)	356, 414, 419, 769, 809, 1655
BspCNI	CTCAG	3 cut(s)	238, 809, 1220
BspDI	ATCGAT	1 cut(s)	309
BspLI	GGNNCC	4 cut(s)	447, 571, 1360, 1629
BspMAI	CTGCAG	1 cut(s)	1091
BspMI	ACCTGC	2 cut(s)	1228, 1605
BspPI	GGATC	5 cut(s)	202, 1244, 1353, 1366, 1515
BspT107I	GGYRCC	1 cut(s)	1627
BspTNI	GGTCTC	2 cut(s)	509, 1126
BsrDI	GCAATG	2 cut(s)	349, 513
BsrGI	TGTACA	1 cut(s)	1071
BsrI	ACTGG	7 cut(s)	661, 731, 882, 1099, 1238, 1401, 1438
BssECI	CCNNGG	4 cut(s)	292, 804, 844, 1323
BssMI	GATC	8 cut(s)	207, 249, 510, 546, 1236, 1358, 1507, 1751
BssNI	GRCGYC	2 cut(s)	96, 114
BssT1I	CCWWGG	2 cut(s)	804, 1323
Bst2UI	CCWGG	1 cut(s)	416
Bst4CI	ACNGT	5 cut(s)	845, 1472, 1552, 1650, 1774
Bst6I	CTCTTC	1 cut(s)	537
BstACI	GRCGYC	2 cut(s)	96, 114
BstAPI	GCANNNNNTGC	2 cut(s)	563, 1712
BstAUI	TGTACA	1 cut(s)	1071
BstC8I	GCNNGC	5 cut(s)	49, 53, 197, 397, 1657
BstDEI	CTNAG	3 cut(s)	246, 796, 1207
BstDSI	CCRYGG	2 cut(s)	804, 844
BstF5I	GGATG	2 cut(s)	1116, 1183
BstKTI	GATC	8 cut(s)	210, 252, 513, 549, 1239, 1361, 1510, 1754
BstMAI	GTCTC	6 cut(s)	509, 587, 669, 1126, 1278, 1522
BstMBI	GATC	8 cut(s)	207, 249, 510, 546, 1236, 1358, 1507, 1751
BstMWI	GCNNNNNNNGC	9 cut(s)	113, 263, 272, 452, 476, 563, 775, 944, 1712
BstNI	CCWGG	1 cut(s)	416
BstNSI	RCATGY	2 cut(s)	1342, 1400
BstSCI	CCNGG	3 cut(s)	414, 1443, 1630
BstSFI	CTRYAG	1 cut(s)	1087
BstV1I	GCAGC	9 cut(s)	454, 466, 632, 934, 1073, 1101, 1210, 1331, 1699
BstV2I	GAAGAC	3 cut(s)	543, 978, 997
BstX2I	RGATCY	4 cut(s)	207, 1358, 1507, 1751
BstXI	CCANNNNNNTGG	1 cut(s)	1000
BstYI	RGATCY	4 cut(s)	207, 1358, 1507, 1751
Bsu15I	ATCGAT	1 cut(s)	309
BsuRI	GGCC	6 cut(s)	356, 414, 419, 769, 809, 1655
BsuTUI	ATCGAT	1 cut(s)	309
BtgI	CCRYGG	2 cut(s)	804, 844
BtrI	CACGTC	1 cut(s)	1516
BtsCI	GGATG	2 cut(s)	1116, 1183
BtsI	GCAGTG	1 cut(s)	564
BtsIMutI	CAGTG	5 cut(s)	564, 889, 1092, 1431, 1468
BveI	ACCTGC	2 cut(s)	1228, 1605
Cac8I	GCNNGC	5 cut(s)	49, 53, 197, 397, 1657
Cfr13I	GGNCC	3 cut(s)	354, 418, 767
ClaI	ATCGAT	1 cut(s)	309
CseI	GACGC	1 cut(s)	122
Csp6I	GTAC	5 cut(s)	133, 837, 1072, 1548, 1744
CviQI	GTAC	5 cut(s)	133, 837, 1072, 1548, 1744
DdeI	CTNAG	3 cut(s)	246, 796, 1207
DpnI	GATC	8 cut(s)	209, 251, 512, 548, 1238, 1360, 1509, 1753
DpnII	GATC	8 cut(s)	207, 249, 510, 546, 1236, 1358, 1507, 1751
DrdI	GACNNNNNNGTC	1 cut(s)	1178
DriI	GACNNNNNGTC	1 cut(s)	1291
DseDI	GACNNNNNNGTC	1 cut(s)	1178
EaeI	YGGCCR	3 cut(s)	412, 807, 1653
Eam1104I	CTCTTC	1 cut(s)	537
Eam1105I	GACNNNNNGTC	1 cut(s)	1291
EarI	CTCTTC	1 cut(s)	537
Ecl136II	GAGCTC	1 cut(s)	914
Eco130I	CCWWGG	2 cut(s)	804, 1323
Eco24I	GRGCYC	1 cut(s)	916
Eco31I	GGTCTC	2 cut(s)	509, 1126
Eco53kI	GAGCTC	1 cut(s)	914
Eco57I	CTGAAG	3 cut(s)	495, 552, 837
Eco88I	CYCGRG	2 cut(s)	293, 590
EcoICRI	GAGCTC	1 cut(s)	914
EcoO109I	RGGNCCY	1 cut(s)	418
EcoRII	CCWGG	1 cut(s)	414
EcoT14I	CCWWGG	2 cut(s)	804, 1323
EcoT38I	GRGCYC	1 cut(s)	916
ErhI	CCWWGG	2 cut(s)	804, 1323
Esp3I	CGTCTC	1 cut(s)	1522
FalI	AAGNNNNNCTT	2 cut(s)	40, 72
FaqI	GGGAC	1 cut(s)	1576
FauI	CCCGC	1 cut(s)	528
FblI	GTMKAC	4 cut(s)	81, 177, 1030, 1422
Fnu4HI	GCNGC	9 cut(s)	468, 480, 621, 948, 1087, 1090, 1224, 1320, 1713
FokI	GGATG	2 cut(s)	1123, 1190
FriOI	GRGCYC	1 cut(s)	916
Fsp4HI	GCNGC	9 cut(s)	468, 480, 621, 948, 1087, 1090, 1224, 1320, 1713
FspBI	CTAG	4 cut(s)	263, 668, 834, 1017
GluI	GCNGC	9 cut(s)	468, 480, 621, 948, 1087, 1090, 1224, 1320, 1713
GsaI	CCCAGC	3 cut(s)	342, 768, 1062
GsuI	CTGGAG	2 cut(s)	317, 1139
HaeIII	GGCC	6 cut(s)	356, 414, 419, 769, 809, 1655
HapII	CCGG	3 cut(s)	1445, 1631, 1683
HgaI	GACGC	1 cut(s)	122
Hin1I	GRCGYC	2 cut(s)	96, 114
HincII	GTYRAC	1 cut(s)	82
HindII	GTYRAC	1 cut(s)	82
HindIII	AAGCTT	1 cut(s)	599
HinfI	GANTC	3 cut(s)	701, 927, 1564
HpaII	CCGG	3 cut(s)	1445, 1631, 1683
HphI	GGTGA	4 cut(s)	450, 1109, 1468, 1516
Hpy166II	GTNNAC	5 cut(s)	82, 178, 1031, 1231, 1423
Hpy188I	TCNGA	6 cut(s)	11, 112, 247, 926, 1210, 1593
Hpy188III	TCNNGA	9 cut(s)	100, 473, 514, 592, 668, 1145, 1156, 1345, 1439
Hpy8I	GTNNAC	5 cut(s)	82, 178, 1031, 1231, 1423
Hpy99I	CGWCG	5 cut(s)	28, 83, 101, 176, 1319
HpyCH4III	ACNGT	5 cut(s)	845, 1472, 1552, 1650, 1774
HpyCH4IV	ACGT	4 cut(s)	96, 1140, 1314, 1515
HpyCH4V	TGCA	7 cut(s)	612, 852, 1036, 1089, 1394, 1574, 1706
HpyF10VI	GCNNNNNNNGC	9 cut(s)	113, 263, 272, 452, 476, 563, 775, 944, 1712
HpyF3I	CTNAG	3 cut(s)	246, 796, 1207
HpySE526I	ACGT	4 cut(s)	96, 1140, 1314, 1515
Hsp92I	GRCGYC	2 cut(s)	96, 114
Kzo9I	GATC	8 cut(s)	207, 249, 510, 546, 1236, 1358, 1507, 1751
LmnI	GCTCC	5 cut(s)	28, 451, 475, 875, 919
Lsp1109I	GCAGC	9 cut(s)	454, 466, 632, 934, 1073, 1101, 1210, 1331, 1699
LweI	GCATC	4 cut(s)	116, 382, 1090, 1583
MaeI	CTAG	4 cut(s)	263, 668, 834, 1017
MaeII	ACGT	4 cut(s)	96, 1140, 1314, 1515
MaeIII	GTNAC	5 cut(s)	652, 1196, 1403, 1522, 1765
MalI	GATC	8 cut(s)	209, 251, 512, 548, 1238, 1360, 1509, 1753
MboI	GATC	8 cut(s)	207, 249, 510, 546, 1236, 1358, 1507, 1751
MfeI	CAATTG	2 cut(s)	424, 1707
MflI	RGATCY	4 cut(s)	207, 1358, 1507, 1751
MhlI	GDGCHC	3 cut(s)	33, 916, 1378
MlsI	TGGCCA	3 cut(s)	414, 809, 1655
MluCI	AATT	4 cut(s)	424, 432, 953, 1707
MluNI	TGGCCA	3 cut(s)	414, 809, 1655
MlyI	GAGTC	2 cut(s)	710, 1558
MmeI	TCCRAC	1 cut(s)	715
Mox20I	TGGCCA	3 cut(s)	414, 809, 1655
MroXI	GAANNNNTTC	2 cut(s)	962, 1163
MscI	TGGCCA	3 cut(s)	414, 809, 1655
MseI	TTAA	3 cut(s)	1044, 1335, 1728
MslI	CAYNNNNRTG	2 cut(s)	998, 1481
Msp20I	TGGCCA	3 cut(s)	414, 809, 1655
MspA1I	CMGCKG	2 cut(s)	530, 1418
MspI	CCGG	3 cut(s)	1445, 1631, 1683
MspR9I	CCNGG	3 cut(s)	416, 1445, 1632
MunI	CAATTG	2 cut(s)	424, 1707
MvaI	CCWGG	1 cut(s)	416
MwoI	GCNNNNNNNGC	9 cut(s)	113, 263, 272, 452, 476, 563, 775, 944, 1712
NciI	CCSGG	2 cut(s)	1445, 1632
NcoI	CCATGG	1 cut(s)	804
NdeII	GATC	8 cut(s)	207, 249, 510, 546, 1236, 1358, 1507, 1751
NlaIV	GGNNCC	4 cut(s)	447, 571, 1360, 1629
NmuCI	GTSAC	2 cut(s)	1522, 1765
NspI	RCATGY	2 cut(s)	1342, 1400
PaeR7I	CTCGAG	1 cut(s)	590
PdmI	GAANNNNTTC	2 cut(s)	962, 1163
PfeI	GAWTC	1 cut(s)	927
PkrI	GCNGC	9 cut(s)	469, 481, 622, 949, 1088, 1091, 1225, 1321, 1714
PleI	GAGTC	2 cut(s)	709, 1558
PpsI	GAGTC	2 cut(s)	709, 1558
Psp124BI	GAGCTC	1 cut(s)	916
Psp1406I	AACGTT	1 cut(s)	1140
Psp6I	CCWGG	1 cut(s)	414
PspFI	CCCAGC	3 cut(s)	338, 764, 1058
PspGI	CCWGG	1 cut(s)	414
PspN4I	GGNNCC	4 cut(s)	447, 571, 1360, 1629
PspPI	GGNCC	3 cut(s)	354, 418, 767
PsrI	GAACNNNNNNTAC	2 cut(s)	1064, 1096
PstI	CTGCAG	1 cut(s)	1091
PsuI	RGATCY	4 cut(s)	207, 1358, 1507, 1751
PvuII	CAGCTG	2 cut(s)	530, 1418
RsaI	GTAC	5 cut(s)	134, 838, 1073, 1549, 1745
RsaNI	GTAC	5 cut(s)	133, 837, 1072, 1548, 1744
RseI	CAYNNNNRTG	2 cut(s)	998, 1481
SacI	GAGCTC	1 cut(s)	916
SalI	GTCGAC	1 cut(s)	80
SaqAI	TTAA	3 cut(s)	1044, 1335, 1728
SatI	GCNGC	9 cut(s)	468, 480, 621, 948, 1087, 1090, 1224, 1320, 1713
Sau3AI	GATC	8 cut(s)	207, 249, 510, 546, 1236, 1358, 1507, 1751
Sau96I	GGNCC	3 cut(s)	354, 418, 767
SchI	GAGTC	2 cut(s)	710, 1558
ScrFI	CCNGG	3 cut(s)	416, 1445, 1632
SduI	GDGCHC	3 cut(s)	33, 916, 1378
SfaNI	GCATC	4 cut(s)	116, 382, 1090, 1583
SfcI	CTRYAG	1 cut(s)	1087
Sfr274I	CTCGAG	1 cut(s)	590
SlaI	CTCGAG	1 cut(s)	590
SmiMI	CAYNNNNRTG	2 cut(s)	998, 1481
SmlI	CTYRAG	3 cut(s)	383, 590, 1343
SmoI	CTYRAG	3 cut(s)	383, 590, 1343
Sse9I	AATT	4 cut(s)	424, 432, 953, 1707
SsiI	CCGC	4 cut(s)	211, 521, 1362, 1782
SspI	AATATT	1 cut(s)	1456
SspMI	CTAG	4 cut(s)	263, 668, 834, 1017
SstI	GAGCTC	1 cut(s)	916
StyD4I	CCNGG	3 cut(s)	414, 1443, 1630
StyI	CCWWGG	2 cut(s)	804, 1323
TaaI	ACNGT	5 cut(s)	845, 1472, 1552, 1650, 1774
TaiI	ACGT	4 cut(s)	99, 1143, 1317, 1518
TaqI	TCGA	8 cut(s)	81, 309, 513, 591, 693, 780, 1239, 1295
TasI	AATT	4 cut(s)	424, 432, 953, 1707
TatI	WGTACW	2 cut(s)	1071, 1743
TfiI	GAWTC	1 cut(s)	927
Tru1I	TTAA	3 cut(s)	1044, 1335, 1728
Tru9I	TTAA	3 cut(s)	1044, 1335, 1728
TscAI	CASTG	5 cut(s)	564, 889, 1099, 1438, 1475
TseFI	GTSAC	2 cut(s)	1522, 1765
TseI	GCWGC	9 cut(s)	467, 479, 620, 947, 1086, 1089, 1223, 1319, 1712
Tsp45I	GTSAC	2 cut(s)	1522, 1765
TspDTI	ATGAA	7 cut(s)	80, 102, 271, 570, 955, 1127, 1754
TspGWI	ACGGA	2 cut(s)	41, 160
TspRI	CASTG	5 cut(s)	564, 889, 1099, 1438, 1475
XbaI	TCTAGA	1 cut(s)	667
XceI	RCATGY	2 cut(s)	1342, 1400
XhoI	CTCGAG	1 cut(s)	590
XmiI	GTMKAC	4 cut(s)	81, 177, 1030, 1422
XmnI	GAANNNNTTC	2 cut(s)	962, 1163
XspI	CTAG	4 cut(s)	263, 668, 834, 1017
ZraI	GACGTC	1 cut(s)	97

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.