Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Reverse (-)

26394458 .. 26396257

Gene Structure 1800 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00187040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGACGTCCGAAGGCGATCGGCGATGGAGCAGCCCACTAAGGGAGCTGGCGGCAGGCCGGTGAAAATGAAAGTGAAGATGGTCGATCACCACGATCAAAACGACGCCGCTAAGGCCTCCGACGCGTTGCCGCTGCCTATGTACCTGACAAATGCGGTCTTCTTCACTCTCTTCTTCTCCGTCGTCTACTTCCTGCTCACTCGCTGGCGCGAGAAGATCCGCACCTCCACTCCTCTCCACATGGTCAATCTGTCTGAGATTGTAGCCATCCTTGCCTTCGTGGCCTCCTTCATCTACCTCCTCGGCTTCTTCGGCATCGATTTCGTCCAGTCCTTGATTCTCCGGCCCAGTCAAGACGTTTGGGCCGCCGAGGATGACGAGGAGGACATTATTCTCAAGGAGGATGCCCGCAAAGTGCCTTGTGGCCAGGCCCTTGATTGTTCAATTCCCAAAATTGCTCCAATCGCTCCACTGAAACCTGCTCTTAAAGTTGCACAGAAGGTGTTTGATAAAGAGGTGGTGAGCGAGACCACGCCGGCAACCGCAGAAGACGAAGAGATCATCAACTCTGTGGTGGCTGGAACCATTCCCTCGTACTCACTCGAGACAAAGCTCGGCGATTGCAAGAGGGCCGCTTCTATCAGGCGTGAGGCTTTGCAGAGAGTCACAGGCAAGTCTCTTGAGGGTTTGCCATTGGAGGGATTCGATTACGAGTCAATTTTGGGTCAATGCTGTGAGATGCCAGTCGGATATGTCACCATCCCTGTTGGAATTGCTGGCCCTATTATGCTCGATGGAAGAGAGTTCTCAATCCCCATGGCCACAACTGAAGGTTGCTTGGTGGCCAGTACCAACCGCGGTTGCAAAGCTATCAACCTGTCCGGTGGAGCTGCCAGTGTGCTGTTGAAAGATGGAATGACCAGAGCACCTGTTGTCAGATTCAACTCGGCTAAGAGAGCTGCTGAGTTGAAGTTCTTCATGGAAGACCCTGAGAATGCCGACACCATAGCCACCCTTTTCAACAAATCAAGCAGATTTGGTAGACTTCAATCAGTTAACTGTGCCGTTGCTGGGAAGAACCTGTACATGAGGTTCTGCTGCAGCACTGGTGATGCTATGGGGATGAACATGGTCTCTAAAGGTGTTCAAAACGTTCTCGATTTCCTCCAGAGTGACTTCCCTGACATGGATGTCATTGGCATTTCTGGTAACTACTGCTCAGACAAGAAGCCTGCTGCTGTCAACTGGATCGAAGGCCGTGGCAAGTCGGTGGTCTGTGAGGCTGTGATCAAGGGAGACATAGTGACGAAGGTTTTGAAAACCAAGGTGGCGGCTTTGGTGGAGCTCAACATGCTCAAGAACCTTACTGGTTCCGCTATTGCTGGTGCTCTTGGTGGTTTCAATGCACATGCCAGTAACATTGTTTCGGCTGTGTACCTTGCCACTGGTCAAGACCCCGCTCAGAACATTGAGAGTTCTCACTGTATCACCATGATGGAAGCCATCAATGATGGCGAGGATCTTCACGTCTCAGTCACCATGCCTTCCATTGAGGTTGGTACCGTAGGAGGAGGGACCCAACTTGCATCCCAGTCAGCATGTTTGAACTTGCTTGGAGTGAAGGGTGCTAACAGAGAGGCACCAGGAGCGAACGCAAGGCAATTGGCCAGTGTTGTAGCTGCGTCGGTTCTTGCCGGAGAGCTTTCTCTCATGTCTGCTATCGCTGCTGGTCAGCTCGTTAGGAGCCACATGAAGTACAACAGATCTAGCAAAGATGTCTCAACAATGGTTTCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

599

Amino Acids

64.03

Weight (kDa)

6.24

Isoelectric Point (pI)

38.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	212 - 588	5.2e-145	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1190
AatII	GACGTC	1 cut(s)	9
Acc36I	ACCTGC	1 cut(s)	487
Acc65I	GGTACC	1 cut(s)	1559
AccB1I	GGYRCC	2 cut(s)	1559, 1639
AccBSI	CCGCTC	1 cut(s)	1460
AccI	GTMKAC	2 cut(s)	186, 1042
AccII	CGCG	3 cut(s)	125, 210, 858
AclI	AACGTT	1 cut(s)	1152
AclWI	GGATC	3 cut(s)	211, 1256, 1527
AcoI	YGGCCR	4 cut(s)	424, 819, 843, 1665
AcuI	CTGAAG	1 cut(s)	849
AcyI	GRCGYC	2 cut(s)	6, 105
AfaI	GTAC	7 cut(s)	143, 596, 850, 1085, 1436, 1561, 1757
AfiI	CCNNNNNNNGG	4 cut(s)	41, 698, 1071, 1186
AflIII	ACRYGT	1 cut(s)	123
AjiI	CACGTC	1 cut(s)	1528
AjnI	CCWGG	2 cut(s)	426, 1642
AluBI	AGCT	9 cut(s)	47, 613, 869, 890, 959, 1345, 1679, 1702, 1735
AluI	AGCT	9 cut(s)	47, 613, 869, 890, 959, 1345, 1679, 1702, 1735
Alw21I	GWGCWC	3 cut(s)	928, 1347, 1390
Alw26I	GTCTC	7 cut(s)	521, 599, 681, 1138, 1290, 1534, 1783
AlwI	GGATC	3 cut(s)	211, 1256, 1527
Ama87I	CYCGRG	1 cut(s)	602
ApeKI	GCWGC	9 cut(s)	31, 133, 890, 959, 1098, 1101, 1235, 1679, 1724
ArsI	GACNNNNNNTTYG	2 cut(s)	1297, 1329
Asp700I	GAANNNNTTC	1 cut(s)	974
Asp718I	GGTACC	1 cut(s)	1559
AspLEI	GCGC	1 cut(s)	210
AspS9I	GGNCC	6 cut(s)	345, 363, 430, 630, 779, 1575
AsuHPI	GGTGA	7 cut(s)	73, 80, 532, 748, 1121, 1480, 1528
AvaI	CYCGRG	1 cut(s)	602
AvaII	GGWCC	1 cut(s)	1575
BalI	TGGCCA	4 cut(s)	426, 821, 845, 1667
BanI	GGYRCC	2 cut(s)	1559, 1639
BanII	GRGCYC	1 cut(s)	1347
BarI	GAAGNNNNNNTAC	2 cut(s)	1067, 1099
BbsI	GAAGAC	3 cut(s)	151, 555, 990
Bbv12I	GWGCWC	3 cut(s)	928, 1347, 1390
BbvI	GCAGC	9 cut(s)	43, 120, 877, 946, 1085, 1113, 1222, 1666, 1711
BccI	CCATC	9 cut(s)	19, 73, 275, 767, 788, 905, 1489, 1505, 1511
BceAI	ACGGC	2 cut(s)	1049, 1242
BcgI	CGANNNNNNTGC	2 cut(s)	304, 338
BciT130I	CCWGG	2 cut(s)	428, 1644
BclI	TGATCA	1 cut(s)	1287
BcoDI	GTCTC	7 cut(s)	521, 599, 681, 1138, 1290, 1534, 1783
BfaI	CTAG	1 cut(s)	1767
BfmI	CTRYAG	1 cut(s)	1099
BfuAI	ACCTGC	1 cut(s)	487
BglI	GCCNNNNNGGC	2 cut(s)	113, 281
BglII	AGATCT	1 cut(s)	1763
Bme1390I	CCNGG	2 cut(s)	428, 1644
Bme18I	GGWCC	1 cut(s)	1575
BmeT110I	CYCGRG	1 cut(s)	602
BmgBI	CACGTC	1 cut(s)	1528
BmgT120I	GGNCC	6 cut(s)	345, 363, 430, 630, 779, 1575
BmiI	GGNNCC	7 cut(s)	583, 1372, 1561, 1576, 1577, 1641, 1745
BmrFI	CCNGG	2 cut(s)	428, 1644
BmrI	ACTGGG	2 cut(s)	342, 1585
BmsI	GCATC	5 cut(s)	324, 394, 729, 1102, 1595
BmuI	ACTGGG	2 cut(s)	342, 1585
BpiI	GAAGAC	3 cut(s)	151, 555, 990
BpmI	CTGGAG	1 cut(s)	1151
Bpu10I	CCTNAGC	1 cut(s)	111
BpuEI	CTTGAG	3 cut(s)	380, 701, 1340
Bsa29I	ATCGAT	1 cut(s)	318
BsaHI	GRCGYC	2 cut(s)	6, 105
BsaI	GGTCTC	2 cut(s)	521, 1138
BsaJI	CCNNGG	6 cut(s)	301, 369, 816, 856, 1258, 1323
BsaWI	WCCGGW	1 cut(s)	881
BsaXI	ACNNNNNCTCC	4 cut(s)	214, 244, 1287, 1317
Bsc4I	CCNNNNNNNGG	4 cut(s)	41, 698, 1071, 1186
Bse118I	RCCGGY	2 cut(s)	58, 535
BseBI	CCWGG	2 cut(s)	428, 1644
BseCI	ATCGAT	1 cut(s)	318
BseDI	CCNNGG	6 cut(s)	301, 369, 816, 856, 1258, 1323
BseGI	GGATG	7 cut(s)	267, 379, 409, 759, 1128, 1195, 1586
BseLI	CCNNNNNNNGG	4 cut(s)	41, 698, 1071, 1186
BseMII	CTCAG	6 cut(s)	246, 954, 981, 1233, 1475, 1545
BseRI	GAGGAG	4 cut(s)	222, 290, 395, 1584
BseXI	GCAGC	9 cut(s)	43, 120, 877, 946, 1085, 1113, 1222, 1666, 1711
BseYI	CCCAGC	1 cut(s)	1070
Bsh1236I	CGCG	3 cut(s)	125, 210, 858
Bsh1285I	CGRYCG	1 cut(s)	20
BshNI	GGYRCC	2 cut(s)	1559, 1639
BshVI	ATCGAT	1 cut(s)	318
BsiEI	CGRYCG	1 cut(s)	20
BsiHKAI	GWGCWC	3 cut(s)	928, 1347, 1390
BsiHKCI	CYCGRG	1 cut(s)	602
BsiSI	CCGG	5 cut(s)	59, 343, 536, 882, 1695
BslFI	GGGAC	1 cut(s)	1588
BslI	CCNNNNNNNGG	4 cut(s)	41, 698, 1071, 1186
BsmAI	GTCTC	7 cut(s)	521, 599, 681, 1138, 1290, 1534, 1783
BsmBI	CGTCTC	1 cut(s)	1534
BsmFI	GGGAC	1 cut(s)	1588
BsmI	GAATGC	1 cut(s)	1000
Bso31I	GGTCTC	2 cut(s)	521, 1138
BsoBI	CYCGRG	1 cut(s)	602
Bsp1286I	GDGCHC	3 cut(s)	928, 1347, 1390
Bsp1407I	TGTACA	1 cut(s)	1083
Bsp143I	GATC	9 cut(s)	17, 85, 94, 216, 558, 1248, 1287, 1519, 1763
Bsp19I	CCATGG	1 cut(s)	816
BspCNI	CTCAG	6 cut(s)	247, 955, 982, 1232, 1474, 1544
BspDI	ATCGAT	1 cut(s)	318
BspFNI	CGCG	3 cut(s)	125, 210, 858
BspLI	GGNNCC	7 cut(s)	583, 1372, 1561, 1576, 1577, 1641, 1745
BspMAI	CTGCAG	1 cut(s)	1103
BspMI	ACCTGC	1 cut(s)	487
BspPI	GGATC	3 cut(s)	211, 1256, 1527
BspT107I	GGYRCC	2 cut(s)	1559, 1639
BspTNI	GGTCTC	2 cut(s)	521, 1138
BsrBI	CCGCTC	1 cut(s)	1460
BsrFI	RCCGGY	2 cut(s)	58, 535
BsrGI	TGTACA	1 cut(s)	1083
BssAI	RCCGGY	2 cut(s)	58, 535
BssECI	CCNNGG	6 cut(s)	301, 369, 816, 856, 1258, 1323
BssMI	GATC	9 cut(s)	17, 85, 94, 216, 558, 1248, 1287, 1519, 1763
BssNI	GRCGYC	2 cut(s)	6, 105
BssT1I	CCWWGG	2 cut(s)	816, 1323
Bst2UI	CCWGG	2 cut(s)	428, 1644
Bst4CI	ACNGT	3 cut(s)	1061, 1484, 1564
Bst6I	CTCTTC	3 cut(s)	176, 549, 793
BstACI	GRCGYC	2 cut(s)	6, 105
BstAUI	TGTACA	1 cut(s)	1083
BstC8I	GCNNGC	7 cut(s)	49, 56, 206, 409, 537, 778, 1233
BstDEI	CTNAG	9 cut(s)	39, 111, 255, 951, 963, 990, 1219, 1461, 1531
BstDSI	CCRYGG	3 cut(s)	816, 856, 1258
BstF5I	GGATG	7 cut(s)	267, 379, 409, 759, 1128, 1195, 1586
BstFNI	CGCG	3 cut(s)	125, 210, 858
BstHHI	GCGC	1 cut(s)	210
BstKTI	GATC	9 cut(s)	20, 88, 97, 219, 561, 1251, 1290, 1522, 1766
BstMAI	GTCTC	7 cut(s)	521, 599, 681, 1138, 1290, 1534, 1783
BstMBI	GATC	9 cut(s)	17, 85, 94, 216, 558, 1248, 1287, 1519, 1763
BstMCI	CGRYCG	1 cut(s)	20
BstNI	CCWGG	2 cut(s)	428, 1644
BstNSI	RCATGY	3 cut(s)	1354, 1412, 1602
BstSCI	CCNGG	2 cut(s)	426, 1642
BstSFI	CTRYAG	1 cut(s)	1099
BstUI	CGCG	3 cut(s)	125, 210, 858
BstV1I	GCAGC	9 cut(s)	43, 120, 877, 946, 1085, 1113, 1222, 1666, 1711
BstV2I	GAAGAC	3 cut(s)	151, 555, 990
BstX2I	RGATCY	3 cut(s)	216, 1519, 1763
BstYI	RGATCY	3 cut(s)	216, 1519, 1763
Bsu15I	ATCGAT	1 cut(s)	318
BsuTUI	ATCGAT	1 cut(s)	318
BtgI	CCRYGG	3 cut(s)	816, 856, 1258
BtgZI	GCGATG	1 cut(s)	38
BtrI	CACGTC	1 cut(s)	1528
BtsCI	GGATG	7 cut(s)	267, 379, 409, 759, 1128, 1195, 1586
BtsIMutI	CAGTG	6 cut(s)	470, 901, 1104, 1443, 1480, 1675
BveI	ACCTGC	1 cut(s)	487
Cac8I	GCNNGC	7 cut(s)	49, 56, 206, 409, 537, 778, 1233
CfoI	GCGC	1 cut(s)	210
Cfr10I	RCCGGY	2 cut(s)	58, 535
Cfr13I	GGNCC	6 cut(s)	345, 363, 430, 630, 779, 1575
Cfr42I	CCGCGG	1 cut(s)	859
ClaI	ATCGAT	1 cut(s)	318
CseI	GACGC	3 cut(s)	113, 131, 1671
Csp6I	GTAC	7 cut(s)	142, 595, 849, 1084, 1435, 1560, 1756
CviQI	GTAC	7 cut(s)	142, 595, 849, 1084, 1435, 1560, 1756
DdeI	CTNAG	9 cut(s)	39, 111, 255, 951, 963, 990, 1219, 1461, 1531
DpnI	GATC	9 cut(s)	19, 87, 96, 218, 560, 1250, 1289, 1521, 1765
DpnII	GATC	9 cut(s)	17, 85, 94, 216, 558, 1248, 1287, 1519, 1763
DrdI	GACNNNNNNGTC	1 cut(s)	1190
DseDI	GACNNNNNNGTC	1 cut(s)	1190
EaeI	YGGCCR	4 cut(s)	424, 819, 843, 1665
Eam1104I	CTCTTC	3 cut(s)	176, 549, 793
EarI	CTCTTC	3 cut(s)	176, 549, 793
Ecl136II	GAGCTC	1 cut(s)	1345
Eco130I	CCWWGG	2 cut(s)	816, 1323
Eco147I	AGGCCT	1 cut(s)	116
Eco24I	GRGCYC	1 cut(s)	1347
Eco31I	GGTCTC	2 cut(s)	521, 1138
Eco47I	GGWCC	1 cut(s)	1575
Eco53kI	GAGCTC	1 cut(s)	1345
Eco57I	CTGAAG	1 cut(s)	849
Eco88I	CYCGRG	1 cut(s)	602
EcoICRI	GAGCTC	1 cut(s)	1345
EcoO109I	RGGNCCY	2 cut(s)	430, 1575
EcoRII	CCWGG	2 cut(s)	426, 1642
EcoT14I	CCWWGG	2 cut(s)	816, 1323
EcoT38I	GRGCYC	1 cut(s)	1347
ErhI	CCWWGG	2 cut(s)	816, 1323
Esp3I	CGTCTC	1 cut(s)	1534
FaqI	GGGAC	1 cut(s)	1588
FauI	CCCGC	2 cut(s)	416, 1465
FbaI	TGATCA	1 cut(s)	1287
FblI	GTMKAC	2 cut(s)	186, 1042
FokI	GGATG	7 cut(s)	254, 386, 416, 746, 1135, 1202, 1573
FriOI	GRGCYC	1 cut(s)	1347
FspBI	CTAG	1 cut(s)	1767
GlaI	GCGC	1 cut(s)	209
GsaI	CCCAGC	1 cut(s)	1074
GsuI	CTGGAG	1 cut(s)	1151
HapII	CCGG	5 cut(s)	59, 343, 536, 882, 1695
HgaI	GACGC	3 cut(s)	113, 131, 1671
HhaI	GCGC	1 cut(s)	210
Hin1I	GRCGYC	2 cut(s)	6, 105
Hin6I	GCGC	1 cut(s)	208
HinP1I	GCGC	1 cut(s)	208
HincII	GTYRAC	2 cut(s)	1057, 1243
HindII	GTYRAC	2 cut(s)	1057, 1243
HinfI	GANTC	5 cut(s)	337, 663, 702, 713, 939
HpaI	GTTAAC	1 cut(s)	1057
HpaII	CCGG	5 cut(s)	59, 343, 536, 882, 1695
HphI	GGTGA	7 cut(s)	73, 80, 532, 748, 1121, 1480, 1528
Hpy166II	GTNNAC	5 cut(s)	187, 1043, 1057, 1243, 1435
Hpy188I	TCNGA	7 cut(s)	11, 121, 256, 749, 938, 1222, 1464
Hpy188III	TCNNGA	7 cut(s)	353, 604, 680, 1157, 1168, 1357, 1451
Hpy8I	GTNNAC	5 cut(s)	187, 1043, 1057, 1243, 1435
Hpy99I	CGWCG	4 cut(s)	107, 125, 185, 1687
HpyAV	CCTTC	9 cut(s)	6, 286, 298, 493, 824, 1247, 1303, 1554, 1615
HpyCH4III	ACNGT	3 cut(s)	1061, 1484, 1564
HpyCH4IV	ACGT	4 cut(s)	6, 357, 1152, 1527
HpyCH4V	TGCA	7 cut(s)	494, 624, 658, 864, 1101, 1406, 1586
HpyF3I	CTNAG	9 cut(s)	39, 111, 255, 951, 963, 990, 1219, 1461, 1531
HpySE526I	ACGT	4 cut(s)	6, 357, 1152, 1527
Hsp92I	GRCGYC	2 cut(s)	6, 105
HspAI	GCGC	1 cut(s)	208
KflI	GGGWCCC	1 cut(s)	1575
KpnI	GGTACC	1 cut(s)	1563
KroI	GCCGGC	1 cut(s)	535
KroNI	GCCGGC	1 cut(s)	537
Ksp22I	TGATCA	1 cut(s)	1287
KspAI	GTTAAC	1 cut(s)	1057
KspI	CCGCGG	1 cut(s)	859
Kzo9I	GATC	9 cut(s)	17, 85, 94, 216, 558, 1248, 1287, 1519, 1763
LmnI	GCTCC	8 cut(s)	28, 44, 463, 472, 887, 1342, 1646, 1743
Lsp1109I	GCAGC	9 cut(s)	43, 120, 877, 946, 1085, 1113, 1222, 1666, 1711
LweI	GCATC	5 cut(s)	324, 394, 729, 1102, 1595
MaeI	CTAG	1 cut(s)	1767
MaeII	ACGT	4 cut(s)	6, 357, 1152, 1527
MaeIII	GTNAC	7 cut(s)	664, 754, 1172, 1208, 1303, 1415, 1534
MalI	GATC	9 cut(s)	19, 87, 96, 218, 560, 1250, 1289, 1521, 1765
MbiI	CCGCTC	1 cut(s)	1460
MboI	GATC	9 cut(s)	17, 85, 94, 216, 558, 1248, 1287, 1519, 1763
MfeI	CAATTG	1 cut(s)	1661
MflI	RGATCY	3 cut(s)	216, 1519, 1763
MhlI	GDGCHC	3 cut(s)	928, 1347, 1390
MlsI	TGGCCA	4 cut(s)	426, 821, 845, 1667
MluCI	AATT	5 cut(s)	444, 453, 717, 771, 1661
MluI	ACGCGT	1 cut(s)	123
MluNI	TGGCCA	4 cut(s)	426, 821, 845, 1667
MlyI	GAGTC	2 cut(s)	672, 722
MmeI	TCCRAC	3 cut(s)	144, 727, 748
Mox20I	TGGCCA	4 cut(s)	426, 821, 845, 1667
MroNI	GCCGGC	1 cut(s)	535
MroXI	GAANNNNTTC	1 cut(s)	974
MscI	TGGCCA	4 cut(s)	426, 821, 845, 1667
MseI	TTAA	3 cut(s)	486, 1056, 1798
MslI	CAYNNNNRTG	1 cut(s)	1493
Msp20I	TGGCCA	4 cut(s)	426, 821, 845, 1667
MspA1I	CMGCKG	2 cut(s)	133, 858
MspI	CCGG	5 cut(s)	59, 343, 536, 882, 1695
MspR9I	CCNGG	2 cut(s)	428, 1644
MunI	CAATTG	1 cut(s)	1661
Mva1269I	GAATGC	1 cut(s)	1000
MvaI	CCWGG	2 cut(s)	428, 1644
MvnI	CGCG	3 cut(s)	125, 210, 858
NaeI	GCCGGC	1 cut(s)	537
NcoI	CCATGG	1 cut(s)	816
NdeII	GATC	9 cut(s)	17, 85, 94, 216, 558, 1248, 1287, 1519, 1763
NgoMIV	GCCGGC	1 cut(s)	535
NlaIV	GGNNCC	7 cut(s)	583, 1372, 1561, 1576, 1577, 1641, 1745
NmeAIII	GCCGAG	4 cut(s)	282, 394, 594, 926
NmuCI	GTSAC	5 cut(s)	664, 754, 1172, 1303, 1534
NspI	RCATGY	3 cut(s)	1354, 1412, 1602
PaeR7I	CTCGAG	1 cut(s)	602
PceI	AGGCCT	1 cut(s)	116
PcsI	WCGNNNNNNNCGW	2 cut(s)	90, 99
PctI	GAATGC	1 cut(s)	1000
PdiI	GCCGGC	1 cut(s)	537
PdmI	GAANNNNTTC	1 cut(s)	974
PfeI	GAWTC	3 cut(s)	337, 702, 939
Ple19I	CGATCG	1 cut(s)	20
PleI	GAGTC	2 cut(s)	671, 721
PpsI	GAGTC	2 cut(s)	671, 721
PpuMI	RGGWCCY	1 cut(s)	1575
Psp124BI	GAGCTC	1 cut(s)	1347
Psp1406I	AACGTT	1 cut(s)	1152
Psp5II	RGGWCCY	1 cut(s)	1575
Psp6I	CCWGG	2 cut(s)	426, 1642
PspFI	CCCAGC	1 cut(s)	1070
PspGI	CCWGG	2 cut(s)	426, 1642
PspN4I	GGNNCC	7 cut(s)	583, 1372, 1561, 1576, 1577, 1641, 1745
PspPI	GGNCC	6 cut(s)	345, 363, 430, 630, 779, 1575
PspPPI	RGGWCCY	1 cut(s)	1575
PsrI	GAACNNNNNNTAC	2 cut(s)	1076, 1108
PstI	CTGCAG	1 cut(s)	1103
PsuI	RGATCY	3 cut(s)	216, 1519, 1763
PvuI	CGATCG	1 cut(s)	20
RsaI	GTAC	7 cut(s)	143, 596, 850, 1085, 1436, 1561, 1757
RsaNI	GTAC	7 cut(s)	142, 595, 849, 1084, 1435, 1560, 1756
RseI	CAYNNNNRTG	1 cut(s)	1493
SacI	GAGCTC	1 cut(s)	1347
SacII	CCGCGG	1 cut(s)	859
SaqAI	TTAA	3 cut(s)	486, 1056, 1798
Sau3AI	GATC	9 cut(s)	17, 85, 94, 216, 558, 1248, 1287, 1519, 1763
Sau96I	GGNCC	6 cut(s)	345, 363, 430, 630, 779, 1575
SchI	GAGTC	2 cut(s)	672, 722
ScrFI	CCNGG	2 cut(s)	428, 1644
SduI	GDGCHC	3 cut(s)	928, 1347, 1390
SfaNI	GCATC	5 cut(s)	324, 394, 729, 1102, 1595
SfcI	CTRYAG	1 cut(s)	1099
Sfr274I	CTCGAG	1 cut(s)	602
Sfr303I	CCGCGG	1 cut(s)	859
SgrBI	CCGCGG	1 cut(s)	859
SinI	GGWCC	1 cut(s)	1575
SlaI	CTCGAG	1 cut(s)	602
SmiMI	CAYNNNNRTG	1 cut(s)	1493
SmlI	CTYRAG	4 cut(s)	395, 602, 680, 1355
SmoI	CTYRAG	4 cut(s)	395, 602, 680, 1355
Sse9I	AATT	5 cut(s)	444, 453, 717, 771, 1661
SseBI	AGGCCT	1 cut(s)	116
SspMI	CTAG	1 cut(s)	1767
SstI	GAGCTC	1 cut(s)	1347
StuI	AGGCCT	1 cut(s)	116
StyD4I	CCNGG	2 cut(s)	426, 1642
StyI	CCWWGG	2 cut(s)	816, 1323
TaaI	ACNGT	3 cut(s)	1061, 1484, 1564
TaiI	ACGT	4 cut(s)	9, 360, 1155, 1530
TaqI	TCGA	7 cut(s)	84, 318, 603, 705, 792, 1158, 1251
TasI	AATT	5 cut(s)	444, 453, 717, 771, 1661
TatI	WGTACW	2 cut(s)	1083, 1755
TauI	GCSGC	6 cut(s)	54, 110, 133, 368, 635, 1334
TfiI	GAWTC	3 cut(s)	337, 702, 939
Tru1I	TTAA	3 cut(s)	486, 1056, 1798
Tru9I	TTAA	3 cut(s)	486, 1056, 1798
TscAI	CASTG	6 cut(s)	477, 901, 1111, 1450, 1487, 1675
TseFI	GTSAC	5 cut(s)	664, 754, 1172, 1303, 1534
TseI	GCWGC	9 cut(s)	31, 133, 890, 959, 1098, 1101, 1235, 1679, 1724
Tsp45I	GTSAC	5 cut(s)	664, 754, 1172, 1303, 1534
TspDTI	ATGAA	5 cut(s)	83, 280, 967, 1139, 1766
TspGWI	ACGGA	1 cut(s)	169
TspRI	CASTG	6 cut(s)	477, 901, 1111, 1450, 1487, 1675
VpaK11BI	GGWCC	1 cut(s)	1575
XceI	RCATGY	3 cut(s)	1354, 1412, 1602
XhoI	CTCGAG	1 cut(s)	602
XmiI	GTMKAC	2 cut(s)	186, 1042
XmnI	GAANNNNTTC	1 cut(s)	974
XspI	CTAG	1 cut(s)	1767
ZraI	GACGTC	1 cut(s)	7

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.