Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Forward (+)

17374141 .. 17376258

Gene Structure 2118 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g13820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGACGTCCGAAGGCGATCTACGATGGATACACCTGCCACCAAGGCCAGAAGTGGGCCGATGAAAGTGAAAGTGGTGGACCACGAGAACGACGTTGGTGTCGTCGGGGCCAAGGCCTCTGACGCCCTGCCGCTGCCGTTGTACCTGACTAACGCCGTCTTCTTCACTCTCTTCTTCTCCGTCGTCTACTTCCTCCTTACTCGTTGGCGCGAGAAGATCAGGACCTCGACGCCGCTCCACGTCGTGAACTTCTCCGAGATCGTCGCGATACTCGCGTTCGTCGCCTCCTTCATCTACTTGCTTGGATTCTTCGGGATCGATTTCGTGCAGTCGCTCATTCTCCGCCCCAGCAATGACGTCTGGGCCGCTGACGATGACGAGGAGGAGCACGAGCGCTTGATATTGAAAGACGACGCCCGGAAAGTGCCGTGTGGGGCCGGACTCGACTGCAGCCCAATTCCCCAAATTGCCCCTGTTGCTGCTGCCGCCCCCAAAGCTGTTGCACAGAAGGTGTTTGATAAAGAGGTAGTCCTCTCCACTCCCTGCGATTTCACCGCCCAGCCGTTGACGGAGGAAGATGAGGAGGTGGTCAAGTCCGTGGTGGCGGGAACCATCCCTTCCTACTCTCTGGAGTCAAAGCTCGGAGATTGCAGGAGGGCGGCGGCTATCAGGCGCGAGGCGCTTCAGAGGATTACAGGAAAGTCTCTGGGTGGTCTGCCATTGGAGGGGTTCGATTACGAGTCAATTTTGGGTCAGTGCTGCGAGATGCCAGTTGGGTATGTTCAGATTCCAGTTGGGATTGCTGGCCCTCTTAGGCTCGATGGCAGAGAGTTTTCCGTACCAATGGCCACCACAGAAGGTTGCTTGGTTGCCAGCACCAACCGTGGCTTCAAAGCTATCAACTTGTCCGGCGGAGCCACCAGTGTGTTGCTGAGAGATGGGATGACCAGAGCACCTTGTGTGAGGTTCAACTCTGCTAAGAGAGCTGCCGAGTTGAAGTTCTACTTGGAAGAACCCAACAATTATGACACCTTGTCCACGGTTTTCAACAGGTCAAGCAGATTCGGTAGGCTTCAGACAATTAAGTGTGCCATTGCTGGGAAGAACTTGTACATGAGATTCACCTGCAGCACCGGTGACGCTATGGGGATGAACATGGTCTCCAAAGGTGTGCAAAACGTTTTGGATTTCCTCCAGAACGACTTCCCTGACATGGATGTGATTGGAATTTCCGGCAACTACTGCTCTGACAAGAAGCCCGCTGCGGTGAACTGGATCGAAGGTCGTGGGAAATCGGTGGTCTGTGAGGCTGTGATCAAGGGTGATGTGGTGCAGAAGGTGTTGAAAACCAATGTGGCGTCCCTGTGCGAGCTTAACATGCTCAAGAACCTTACTGGGTCTGCAATGGCTGGAGCCCTCGGTGGATTCAACGCACATGCCAGCAACATCGTCTCTGCCATCTACATCGCTACCGGCCAAGACCCAGCTCAGAATGTGGAGAGTTCTCACTGCATTACCATGATGGAACCCATCAATGATGGACAGGACCTTCACGTGTCTGTCACCATGCCTTCAATTGAGGTTGGTACTGTTGGAGGTGGGACCCAACTTGCATCTCAATCAGCTTGTCTGAACCTTCTTGGAGTGAAGGGTGCTAACAGGGAGGCACCAGGATCGAATGCAAGATTGTTGGCCACTGTTGTGGCTGGTTCTGTTCTTGCCGGAGAGCTTTCTCTTATGTCTGCTATCTCAGCTGGACAGCTTGTGAATAGTCACATGAAATACAACAGATCAAGCAAAGATGTCTCAGCTGTTGCGTCCGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

609

Amino Acids

65.0

Weight (kDa)

6.24

Isoelectric Point (pI)

36.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	221 - 597	1.6e-144	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	43, 1133
AasI	GACNNNNNNGTC	1 cut(s)	98
AatII	GACGTC	2 cut(s)	9, 360
Acc36I	ACCTGC	2 cut(s)	43, 1133
AccB1I	GGYRCC	1 cut(s)	1666
AccBSI	CCGCTC	1 cut(s)	235
AccI	GTMKAC	1 cut(s)	186
AccII	CGCG	4 cut(s)	210, 266, 275, 675
AclI	AACGTT	1 cut(s)	1179
AclWI	GGATC	3 cut(s)	323, 1283, 1681
AcoI	YGGCCR	3 cut(s)	846, 1474, 1692
AcsI	RAATTY	1 cut(s)	1227
AcuI	CTGAAG	2 cut(s)	668, 1058
AcvI	CACGTG	1 cut(s)	1555
AcyI	GRCGYC	6 cut(s)	6, 123, 230, 357, 414, 1358
AdeI	CACNNNGTG	2 cut(s)	244, 959
AfaI	GTAC	4 cut(s)	143, 840, 1112, 1588
AfeI	AGCGCT	1 cut(s)	395
AfiI	CCNNNNNNNGG	4 cut(s)	54, 725, 1098, 1213
AflIII	ACRYGT	1 cut(s)	1554
AgeI	ACCGGT	1 cut(s)	1133
AgsI	TTSAA	8 cut(s)	406, 892, 970, 997, 1048, 1345, 1429, 1575
AhdI	GACNNNNNGTC	1 cut(s)	1033
AjiI	CACGTC	1 cut(s)	241
AjnI	CCWGG	1 cut(s)	1669
AjuI	GAANNNNNNNTTGG	4 cut(s)	872, 904, 989, 1021
AleI	CACNNNNGTG	2 cut(s)	923, 1700
AloI	GAACNNNNNNTCC	2 cut(s)	1145, 1177
Alw21I	GWGCWC	2 cut(s)	390, 955
Alw26I	GTCTC	4 cut(s)	708, 1165, 1456, 1810
AlwI	GGATC	3 cut(s)	323, 1283, 1681
Aor51HI	AGCGCT	1 cut(s)	395
ApeKI	GCWGC	8 cut(s)	133, 450, 479, 482, 759, 986, 1128, 1262
ApoI	RAATTY	1 cut(s)	1227
AsiGI	ACCGGT	1 cut(s)	1133
Asp700I	GAANNNNTTC	1 cut(s)	1202
AspLEI	GCGC	4 cut(s)	210, 396, 675, 682
AspS9I	GGNCC	9 cut(s)	56, 79, 108, 222, 363, 435, 806, 1546, 1602
AsuC2I	CCSGG	1 cut(s)	418
AsuHPI	GGTGA	6 cut(s)	544, 1114, 1148, 1279, 1334, 1555
AvaII	GGWCC	4 cut(s)	79, 222, 1546, 1602
BaeI	ACNNNNGTAYC	2 cut(s)	260, 293
BalI	TGGCCA	2 cut(s)	848, 1694
BanI	GGYRCC	1 cut(s)	1666
BanII	GRGCYC	1 cut(s)	1417
BarI	GAAGNNNNNNTAC	3 cut(s)	36, 1094, 1126
BauI	CACGAG	2 cut(s)	83, 389
BbrPI	CACGTG	1 cut(s)	1555
BbsI	GAAGAC	1 cut(s)	151
Bbv12I	GWGCWC	2 cut(s)	390, 955
BbvI	GCAGC	8 cut(s)	120, 462, 466, 469, 746, 973, 1140, 1249
BccI	CCATC	8 cut(s)	19, 620, 815, 932, 1466, 1516, 1532, 1538
BceAI	ACGGC	4 cut(s)	121, 140, 412, 547
BcgI	CGANNNNNNTGC	2 cut(s)	1656, 1690
BciT130I	CCWGG	1 cut(s)	1671
BciVI	GTATCC	1 cut(s)	22
BclI	TGATCA	1 cut(s)	1314
BcnI	CCSGG	1 cut(s)	418
BcoDI	GTCTC	4 cut(s)	708, 1165, 1456, 1810
BfmI	CTRYAG	2 cut(s)	448, 1126
BfoI	RGCGCY	2 cut(s)	397, 683
BfuAI	ACCTGC	2 cut(s)	43, 1133
BfuI	GTATCC	1 cut(s)	22
BglI	GCCNNNNNGGC	1 cut(s)	44
Bme1390I	CCNGG	2 cut(s)	418, 1671
Bme18I	GGWCC	4 cut(s)	79, 222, 1546, 1602
BmeRI	GACNNNNNGTC	1 cut(s)	1033
BmgBI	CACGTC	1 cut(s)	241
BmgT120I	GGNCC	9 cut(s)	56, 79, 108, 222, 363, 435, 806, 1546, 1602
BmiI	GGNNCC	9 cut(s)	109, 436, 610, 916, 1414, 1527, 1603, 1604, 1668
BmrFI	CCNGG	2 cut(s)	418, 1671
BmrI	ACTGGG	1 cut(s)	1404
BmsI	GCATC	2 cut(s)	756, 1622
BmuI	ACTGGG	1 cut(s)	1404
BpiI	GAAGAC	1 cut(s)	151
BpmI	CTGGAG	3 cut(s)	650, 1178, 1431
BpuEI	CTTGAG	1 cut(s)	1367
BpuMI	CCSGG	1 cut(s)	418
Bsa29I	ATCGAT	1 cut(s)	318
BsaAI	YACGTR	1 cut(s)	1555
BsaHI	GRCGYC	6 cut(s)	6, 123, 230, 357, 414, 1358
BsaI	GGTCTC	1 cut(s)	1165
BsaJI	CCNNGG	6 cut(s)	42, 111, 597, 883, 1038, 1417
BsaWI	WCCGGW	1 cut(s)	1133
BsaXI	ACNNNNNCTCC	2 cut(s)	1145, 1175
Bsc4I	CCNNNNNNNGG	4 cut(s)	54, 725, 1098, 1213
Bse118I	RCCGGY	2 cut(s)	1133, 1472
Bse1I	ACTGG	5 cut(s)	770, 791, 921, 1277, 1399
Bse3DI	GCAATG	3 cut(s)	358, 1092, 1410
BseBI	CCWGG	1 cut(s)	1671
BseCI	ATCGAT	1 cut(s)	318
BseDI	CCNNGG	6 cut(s)	42, 111, 597, 883, 1038, 1417
BseGI	GGATG	4 cut(s)	612, 948, 1155, 1222
BseLI	CCNNNNNNNGG	4 cut(s)	54, 725, 1098, 1213
BseMI	GCAATG	3 cut(s)	358, 1092, 1410
BseMII	CTCAG	4 cut(s)	923, 1502, 1764, 1821
BseNI	ACTGG	5 cut(s)	770, 791, 921, 1277, 1399
BseRI	GAGGAG	3 cut(s)	395, 398, 596
BseXI	GCAGC	8 cut(s)	120, 462, 466, 469, 746, 973, 1140, 1249
BseYI	CCCAGC	4 cut(s)	347, 558, 1097, 1483
BsgI	GTGCAG	2 cut(s)	347, 1352
Bsh1236I	CGCG	4 cut(s)	210, 266, 275, 675
BshNI	GGYRCC	1 cut(s)	1666
BshTI	ACCGGT	1 cut(s)	1133
BshVI	ATCGAT	1 cut(s)	318
BsiHKAI	GWGCWC	2 cut(s)	390, 955
BsiSI	CCGG	7 cut(s)	418, 438, 909, 1134, 1233, 1473, 1722
BslFI	GGGAC	2 cut(s)	1345, 1615
BslI	CCNNNNNNNGG	4 cut(s)	54, 725, 1098, 1213
BsmAI	GTCTC	4 cut(s)	708, 1165, 1456, 1810
BsmBI	CGTCTC	1 cut(s)	1456
BsmFI	GGGAC	2 cut(s)	1345, 1615
BsmI	GAATGC	1 cut(s)	1684
Bso31I	GGTCTC	1 cut(s)	1165
Bsp1286I	GDGCHC	3 cut(s)	390, 955, 1417
Bsp1407I	TGTACA	1 cut(s)	1110
Bsp143I	GATC	8 cut(s)	17, 216, 258, 315, 1275, 1314, 1673, 1790
Bsp68I	TCGCGA	1 cut(s)	266
BspCNI	CTCAG	4 cut(s)	924, 1501, 1763, 1820
BspDI	ATCGAT	1 cut(s)	318
BspFNI	CGCG	4 cut(s)	210, 266, 275, 675
BspLI	GGNNCC	9 cut(s)	109, 436, 610, 916, 1414, 1527, 1603, 1604, 1668
BspMAI	CTGCAG	2 cut(s)	452, 1130
BspMI	ACCTGC	2 cut(s)	43, 1133
BspPI	GGATC	3 cut(s)	323, 1283, 1681
BspT107I	GGYRCC	1 cut(s)	1666
BspTNI	GGTCTC	1 cut(s)	1165
BsrBI	CCGCTC	1 cut(s)	235
BsrDI	GCAATG	3 cut(s)	358, 1092, 1410
BsrFI	RCCGGY	2 cut(s)	1133, 1472
BsrGI	TGTACA	1 cut(s)	1110
BsrI	ACTGG	5 cut(s)	770, 791, 921, 1277, 1399
BssAI	RCCGGY	2 cut(s)	1133, 1472
BssECI	CCNNGG	6 cut(s)	42, 111, 597, 883, 1038, 1417
BssMI	GATC	8 cut(s)	17, 216, 258, 315, 1275, 1314, 1673, 1790
BssNI	GRCGYC	6 cut(s)	6, 123, 230, 357, 414, 1358
BssSI	CACGAG	2 cut(s)	83, 389
BssT1I	CCWWGG	2 cut(s)	42, 111
Bst2BI	CACGAG	2 cut(s)	83, 389
Bst2UI	CCWGG	1 cut(s)	1671
Bst4CI	ACNGT	4 cut(s)	884, 1042, 1591, 1699
Bst6I	CTCTTC	1 cut(s)	176
BstACI	GRCGYC	6 cut(s)	6, 123, 230, 357, 414, 1358
BstAPI	GCANNNNNTGC	1 cut(s)	1242
BstAUI	TGTACA	1 cut(s)	1110
BstBAI	YACGTR	1 cut(s)	1555
BstC8I	GCNNGC	5 cut(s)	805, 874, 1260, 1370, 1441
BstDEI	CTNAG	6 cut(s)	812, 932, 978, 1488, 1750, 1807
BstDSI	CCRYGG	3 cut(s)	597, 883, 1038
BstF5I	GGATG	4 cut(s)	612, 948, 1155, 1222
BstFNI	CGCG	4 cut(s)	210, 266, 275, 675
BstH2I	RGCGCY	2 cut(s)	397, 683
BstHHI	GCGC	4 cut(s)	210, 396, 675, 682
BstKTI	GATC	8 cut(s)	20, 219, 261, 318, 1278, 1317, 1676, 1793
BstMAI	GTCTC	4 cut(s)	708, 1165, 1456, 1810
BstMBI	GATC	8 cut(s)	17, 216, 258, 315, 1275, 1314, 1673, 1790
BstNI	CCWGG	1 cut(s)	1671
BstNSI	RCATGY	2 cut(s)	1381, 1439
BstSCI	CCNGG	2 cut(s)	416, 1669
BstSFI	CTRYAG	2 cut(s)	448, 1126
BstUI	CGCG	4 cut(s)	210, 266, 275, 675
BstV1I	GCAGC	8 cut(s)	120, 462, 466, 469, 746, 973, 1140, 1249
BstV2I	GAAGAC	1 cut(s)	151
BstXI	CCANNNNNNTGG	1 cut(s)	1702
Bsu15I	ATCGAT	1 cut(s)	318
BsuI	GTATCC	1 cut(s)	22
BsuTUI	ATCGAT	1 cut(s)	318
BtgI	CCRYGG	3 cut(s)	597, 883, 1038
BtgZI	GCGATG	1 cut(s)	1450
BtrI	CACGTC	1 cut(s)	241
BtsCI	GGATG	4 cut(s)	612, 948, 1155, 1222
BtsI	GCAGTG	1 cut(s)	1507
BtsIMutI	CAGTG	4 cut(s)	761, 928, 1507, 1695
BtuMI	TCGCGA	1 cut(s)	266
BveI	ACCTGC	2 cut(s)	43, 1133
Cac8I	GCNNGC	5 cut(s)	805, 874, 1260, 1370, 1441
CfoI	GCGC	4 cut(s)	210, 396, 675, 682
Cfr10I	RCCGGY	2 cut(s)	1133, 1472
Cfr13I	GGNCC	9 cut(s)	56, 79, 108, 222, 363, 435, 806, 1546, 1602
ClaI	ATCGAT	1 cut(s)	318
CseI	GACGC	6 cut(s)	131, 238, 422, 1148, 1347, 1806
Csp6I	GTAC	4 cut(s)	142, 839, 1111, 1587
CspAI	ACCGGT	1 cut(s)	1133
CviAII	CATG	8 cut(s)	1114, 1156, 1213, 1378, 1436, 1519, 1567, 1777
CviQI	GTAC	4 cut(s)	142, 839, 1111, 1587
DdeI	CTNAG	6 cut(s)	812, 932, 978, 1488, 1750, 1807
DpnI	GATC	8 cut(s)	19, 218, 260, 317, 1277, 1316, 1675, 1792
DpnII	GATC	8 cut(s)	17, 216, 258, 315, 1275, 1314, 1673, 1790
DraIII	CACNNNGTG	2 cut(s)	244, 959
DrdI	GACNNNNNNGTC	1 cut(s)	98
DriI	GACNNNNNGTC	1 cut(s)	1033
DseDI	GACNNNNNNGTC	1 cut(s)	98
EaeI	YGGCCR	3 cut(s)	846, 1474, 1692
Eam1104I	CTCTTC	1 cut(s)	176
Eam1105I	GACNNNNNGTC	1 cut(s)	1033
EarI	CTCTTC	1 cut(s)	176
EciI	GGCGGA	2 cut(s)	332, 927
Eco130I	CCWWGG	2 cut(s)	42, 111
Eco147I	AGGCCT	1 cut(s)	116
Eco24I	GRGCYC	1 cut(s)	1417
Eco31I	GGTCTC	1 cut(s)	1165
Eco47I	GGWCC	4 cut(s)	79, 222, 1546, 1602
Eco47III	AGCGCT	1 cut(s)	395
Eco57I	CTGAAG	2 cut(s)	668, 1058
Eco72I	CACGTG	1 cut(s)	1555
EcoO109I	RGGNCCY	3 cut(s)	222, 1546, 1602
EcoRII	CCWGG	1 cut(s)	1669
EcoT14I	CCWWGG	2 cut(s)	42, 111
EcoT38I	GRGCYC	1 cut(s)	1417
ErhI	CCWWGG	2 cut(s)	42, 111
Esp3I	CGTCTC	1 cut(s)	1456
FaeI	CATG	8 cut(s)	1117, 1159, 1216, 1381, 1439, 1522, 1570, 1780
FalI	AAGNNNNNCTT	2 cut(s)	989, 1021
FaqI	GGGAC	2 cut(s)	1345, 1615
FatI	CATG	8 cut(s)	1113, 1155, 1212, 1377, 1435, 1518, 1566, 1776
FauI	CCCGC	2 cut(s)	598, 1267
FbaI	TGATCA	1 cut(s)	1314
FblI	GTMKAC	1 cut(s)	186
FokI	GGATG	4 cut(s)	599, 955, 1162, 1229
FriOI	GRGCYC	1 cut(s)	1417
GlaI	GCGC	4 cut(s)	209, 395, 674, 681
GsaI	CCCAGC	4 cut(s)	351, 562, 1101, 1487
GsuI	CTGGAG	3 cut(s)	650, 1178, 1431
HaeII	RGCGCY	2 cut(s)	397, 683
HapII	CCGG	7 cut(s)	418, 438, 909, 1134, 1233, 1473, 1722
HgaI	GACGC	6 cut(s)	131, 238, 422, 1148, 1347, 1806
HhaI	GCGC	4 cut(s)	210, 396, 675, 682
Hin1I	GRCGYC	6 cut(s)	6, 123, 230, 357, 414, 1358
Hin1II	CATG	8 cut(s)	1117, 1159, 1216, 1381, 1439, 1522, 1570, 1780
Hin6I	GCGC	4 cut(s)	208, 394, 673, 680
HinP1I	GCGC	4 cut(s)	208, 394, 673, 680
HincII	GTYRAC	1 cut(s)	567
HindII	GTYRAC	1 cut(s)	567
HinfI	GANTC	8 cut(s)	306, 441, 632, 740, 787, 1062, 1119, 1425
HpaII	CCGG	7 cut(s)	418, 438, 909, 1134, 1233, 1473, 1722
HphI	GGTGA	6 cut(s)	544, 1114, 1148, 1279, 1334, 1555
Hpy166II	GTNNAC	6 cut(s)	79, 187, 247, 567, 1038, 1270
Hpy188III	TCNNGA	7 cut(s)	220, 244, 265, 313, 629, 1195, 1384
Hpy8I	GTNNAC	6 cut(s)	79, 187, 247, 567, 1038, 1270
Hpy99I	CGWCG	8 cut(s)	95, 107, 185, 232, 245, 266, 284, 416
HpyCH4III	ACNGT	4 cut(s)	884, 1042, 1591, 1699
HpyCH4IV	ACGT	6 cut(s)	6, 93, 240, 357, 1179, 1554
HpyF3I	CTNAG	6 cut(s)	812, 932, 978, 1488, 1750, 1807
HpySE526I	ACGT	6 cut(s)	6, 93, 240, 357, 1179, 1554
Hsp92I	GRCGYC	6 cut(s)	6, 123, 230, 357, 414, 1358
Hsp92II	CATG	8 cut(s)	1117, 1159, 1216, 1381, 1439, 1522, 1570, 1780
HspAI	GCGC	4 cut(s)	208, 394, 673, 680
KflI	GGGWCCC	1 cut(s)	1602
Ksp22I	TGATCA	1 cut(s)	1314
Kzo9I	GATC	8 cut(s)	17, 216, 258, 315, 1275, 1314, 1673, 1790
LmnI	GCTCC	4 cut(s)	240, 385, 914, 1412
Lsp1109I	GCAGC	8 cut(s)	120, 462, 466, 469, 746, 973, 1140, 1249
LweI	GCATC	2 cut(s)	756, 1622
MaeII	ACGT	6 cut(s)	6, 93, 240, 357, 1179, 1554
MaeIII	GTNAC	3 cut(s)	1136, 1561, 1772
MalI	GATC	8 cut(s)	19, 218, 260, 317, 1277, 1316, 1675, 1792
MbiI	CCGCTC	1 cut(s)	235
MboI	GATC	8 cut(s)	17, 216, 258, 315, 1275, 1314, 1673, 1790
MboII	GAAGA	9 cut(s)	151, 154, 163, 166, 226, 301, 587, 1022, 1114
MfeI	CAATTG	1 cut(s)	1575
MhlI	GDGCHC	3 cut(s)	390, 955, 1417
MlsI	TGGCCA	2 cut(s)	848, 1694
MluCI	AATT	7 cut(s)	456, 465, 744, 1021, 1080, 1227, 1575
MluNI	TGGCCA	2 cut(s)	848, 1694
MlyI	GAGTC	3 cut(s)	435, 641, 749
MmeI	TCCRAC	1 cut(s)	1573
Mox20I	TGGCCA	2 cut(s)	848, 1694
MroXI	GAANNNNTTC	1 cut(s)	1202
MscI	TGGCCA	2 cut(s)	848, 1694
MseI	TTAA	3 cut(s)	1083, 1374, 1825
MslI	CAYNNNNRTG	4 cut(s)	923, 1217, 1517, 1700
Msp20I	TGGCCA	2 cut(s)	848, 1694
MspA1I	CMGCKG	5 cut(s)	133, 368, 1262, 1754, 1811
MspI	CCGG	7 cut(s)	418, 438, 909, 1134, 1233, 1473, 1722
MspR9I	CCNGG	2 cut(s)	418, 1671
MunI	CAATTG	1 cut(s)	1575
Mva1269I	GAATGC	1 cut(s)	1684
MvaI	CCWGG	1 cut(s)	1671
MvnI	CGCG	4 cut(s)	210, 266, 275, 675
NciI	CCSGG	1 cut(s)	418
NdeII	GATC	8 cut(s)	17, 216, 258, 315, 1275, 1314, 1673, 1790
NlaIII	CATG	8 cut(s)	1117, 1159, 1216, 1381, 1439, 1522, 1570, 1780
NlaIV	GGNNCC	9 cut(s)	109, 436, 610, 916, 1414, 1527, 1603, 1604, 1668
NmeAIII	GCCGAG	1 cut(s)	1015
NmuCI	GTSAC	3 cut(s)	1136, 1561, 1772
NruI	TCGCGA	1 cut(s)	266
NspI	RCATGY	2 cut(s)	1381, 1439
OliI	CACNNNNGTG	2 cut(s)	923, 1700
PaqCI	CACCTGC	2 cut(s)	43, 1133
PceI	AGGCCT	1 cut(s)	116
PcsI	WCGNNNNNNNCGW	2 cut(s)	90, 99
PctI	GAATGC	1 cut(s)	1684
PdmI	GAANNNNTTC	1 cut(s)	1202
PfeI	GAWTC	5 cut(s)	306, 787, 1062, 1119, 1425
PinAI	ACCGGT	1 cut(s)	1133
PleI	GAGTC	3 cut(s)	435, 640, 748
PmaCI	CACGTG	1 cut(s)	1555
PmlI	CACGTG	1 cut(s)	1555
PpsI	GAGTC	3 cut(s)	435, 640, 748
Ppu21I	YACGTR	1 cut(s)	1555
PpuMI	RGGWCCY	3 cut(s)	222, 1546, 1602
Psp1406I	AACGTT	1 cut(s)	1179
Psp5II	RGGWCCY	3 cut(s)	222, 1546, 1602
Psp6I	CCWGG	1 cut(s)	1669
PspCI	CACGTG	1 cut(s)	1555
PspFI	CCCAGC	4 cut(s)	347, 558, 1097, 1483
PspGI	CCWGG	1 cut(s)	1669
PspN4I	GGNNCC	9 cut(s)	109, 436, 610, 916, 1414, 1527, 1603, 1604, 1668
PspPI	GGNCC	9 cut(s)	56, 79, 108, 222, 363, 435, 806, 1546, 1602
PspPPI	RGGWCCY	3 cut(s)	222, 1546, 1602
PstI	CTGCAG	2 cut(s)	452, 1130
PvuII	CAGCTG	2 cut(s)	1754, 1811
RruI	TCGCGA	1 cut(s)	266
RsaI	GTAC	4 cut(s)	143, 840, 1112, 1588
RsaNI	GTAC	4 cut(s)	142, 839, 1111, 1587
RseI	CAYNNNNRTG	4 cut(s)	923, 1217, 1517, 1700
SaqAI	TTAA	3 cut(s)	1083, 1374, 1825
Sau3AI	GATC	8 cut(s)	17, 216, 258, 315, 1275, 1314, 1673, 1790
Sau96I	GGNCC	9 cut(s)	56, 79, 108, 222, 363, 435, 806, 1546, 1602
SchI	GAGTC	3 cut(s)	435, 641, 749
ScrFI	CCNGG	2 cut(s)	418, 1671
SduI	GDGCHC	3 cut(s)	390, 955, 1417
SfaNI	GCATC	2 cut(s)	756, 1622
SfcI	CTRYAG	2 cut(s)	448, 1126
SgrAI	CRCCGGYG	1 cut(s)	1133
SinI	GGWCC	4 cut(s)	79, 222, 1546, 1602
SmiMI	CAYNNNNRTG	4 cut(s)	923, 1217, 1517, 1700
SmlI	CTYRAG	1 cut(s)	1382
SmoI	CTYRAG	1 cut(s)	1382
Sse9I	AATT	7 cut(s)	456, 465, 744, 1021, 1080, 1227, 1575
SseBI	AGGCCT	1 cut(s)	116
StuI	AGGCCT	1 cut(s)	116
StyD4I	CCNGG	2 cut(s)	416, 1669
StyI	CCWWGG	2 cut(s)	42, 111
TaaI	ACNGT	4 cut(s)	884, 1042, 1591, 1699
TaiI	ACGT	6 cut(s)	9, 96, 243, 360, 1182, 1557
TaqI	TCGA	7 cut(s)	227, 318, 444, 732, 819, 1278, 1676
TasI	AATT	7 cut(s)	456, 465, 744, 1021, 1080, 1227, 1575
TatI	WGTACW	1 cut(s)	1110
TauI	GCSGC	6 cut(s)	133, 235, 368, 488, 662, 665
TfiI	GAWTC	5 cut(s)	306, 787, 1062, 1119, 1425
Tru1I	TTAA	3 cut(s)	1083, 1374, 1825
Tru9I	TTAA	3 cut(s)	1083, 1374, 1825
TscAI	CASTG	4 cut(s)	761, 928, 1514, 1702
TseFI	GTSAC	3 cut(s)	1136, 1561, 1772
TseI	GCWGC	8 cut(s)	133, 450, 479, 482, 759, 986, 1128, 1262
Tsp45I	GTSAC	3 cut(s)	1136, 1561, 1772
TspDTI	ATGAA	4 cut(s)	77, 280, 1166, 1793
TspGWI	ACGGA	4 cut(s)	169, 584, 586, 826
TspRI	CASTG	4 cut(s)	761, 928, 1514, 1702
VpaK11BI	GGWCC	4 cut(s)	79, 222, 1546, 1602
XapI	RAATTY	1 cut(s)	1227
XceI	RCATGY	2 cut(s)	1381, 1439
XmiI	GTMKAC	1 cut(s)	186
XmnI	GAANNNNTTC	1 cut(s)	1202
ZraI	GACGTC	2 cut(s)	7, 358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.