Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Reverse (-)

46781587 .. 46783308

Gene Structure 1722 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG255400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1314 bp

ATGGAGCACGCTACCGGCAAGGGAGGCAACAAGCCCGTGAAAACGAAAGTCAAGTTCGTCGACGATGAGGAAACCAAAGTCGTCAAGGCCTCCGACGCCTTGCCTCTGCCGCTCTACCTCACCAACGCCGTCTTCTTCACTCTCTTCTTCTCCGTCGCCTACTTCCTGCTCACCAGCTGGCGTGAGAAGATCCGTTCCAACACGCCTCTCCACATCCTCAATCTCTCTGAGCTCGTCTCCATTCTGGTCTTGGTTGCGTCCTTCGTCTACCTCCTCGCCTTCTTCGGCATCGATTTCGTTCAGACCCCAGCTCTCAAGGACGAAGAAGAAGACATTATTGTCCAGGAGGATGCTCGCGTGGTCCCTTGCGGCCAAGCCCTCGAGTGCCCGGTTCCCCAGATTGCCCCTAAAGCTGCACAGAAGGATGGAATGACCAGAGCACCTGTTGTTAGATTCAACTCTGCTAAAAGGGCTGCTGAGTTGAAGTTCTTCATGGAAGAGCCCGACAATTACGAAACCATCTCTATGGTTTTCAACAAATCAAGCAGATTTGGTAGACTTCAGACCGTCAAGTGTGCTGTTGCTGGGAAGAACCTGTACATGAGGTTCTGCTGCAGCACTGGTGATGCTATGGGGATGAACATGGTCTCTAAAGGTGTTCAAAACGTTCTCGATTTCCTCCAGAATGACTTCCCTGACATGGATGTCATTGGCATTTCTGGTAACTACTGCTCAGACAAAAAGCCTGCTGCTGTCAACTGGATTGAAGGCCGTGGCAAATCTGTGGTTTGCGAGGCTGTTATCAAGGGAGACATAGTGACGAAGGTGTTGAAAACCAATGTGGCGGCCTTGGTGGAGCTTAACATGCTCAAGAACCTAACTGGTTCTGCAATTGCTGGTGCCCTTGGTGGTTTCAATGCACATGCCAGTAACATTGTTTCAGCAGTCTACCTAGCCACTGGTCAAGATCCAGCTCAGAACATCGAGAGTTCTCACTGTATCACCATGATGGAAGCCATCAATGATGCCAAGGATCTTCACGTCTCAGTGACCATGCCTTCTATTGAGGTCGGCACAGTAGGAGGAGGTACCCAACTGGCATCGCAGTCGGCTTGCTTGAATTTGCTCGGAGTGAAGGGTGCCAACAGAGAGGCACCAGGATCAAACGCAAGGCAGTTAGCAAGTGTTGTAGCAGGTGCTGTTCTTGCTGGAGAGCTGTCTCTCATGTCTGCCATTGCTGCTGGACAACTTGTTAAGAGCCACATGAAGTACAACAGATCTAGCAAAGATGTCACAGCTGTTGCTGCCGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

437

Amino Acids

46.73

Weight (kDa)

6.99

Isoelectric Point (pI)

33.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	139 - 426	1.9e-106	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1184
AasI	GACNNNNNNGTC	2 cut(s)	338, 704
Acc36I	ACCTGC	1 cut(s)	1184
Acc65I	GGTACC	1 cut(s)	1088
AccB1I	GGYRCC	4 cut(s)	899, 1088, 1139, 1153
AccBSI	CCGCTC	1 cut(s)	112
AccI	GTMKAC	4 cut(s)	60, 267, 556, 948
AccII	CGCG	1 cut(s)	357
AciI	CCGC	4 cut(s)	110, 369, 845, 1308
AclI	AACGTT	1 cut(s)	666
AclWI	GGATC	4 cut(s)	184, 962, 1041, 1168
AcoI	YGGCCR	1 cut(s)	370
AcsI	RAATTY	1 cut(s)	1120
AcuI	CTGAAG	1 cut(s)	545
AcyI	GRCGYC	1 cut(s)	96
AfaI	GTAC	3 cut(s)	599, 1090, 1271
AfiI	CCNNNNNNNGG	1 cut(s)	700
AgsI	TTSAA	8 cut(s)	457, 484, 535, 662, 767, 832, 916, 1120
AjiI	CACGTC	1 cut(s)	1042
AjnI	CCWGG	2 cut(s)	342, 1156
AjuI	GAANNNNNNNTTGG	2 cut(s)	116, 148
AluBI	AGCT	8 cut(s)	177, 232, 311, 413, 859, 974, 1216, 1298
AluI	AGCT	8 cut(s)	177, 232, 311, 413, 859, 974, 1216, 1298
Alw21I	GWGCWC	3 cut(s)	9, 234, 442
Alw26I	GTCTC	5 cut(s)	241, 652, 804, 1048, 1224
AlwI	GGATC	4 cut(s)	184, 962, 1041, 1168
AlwNI	CAGNNNCTG	1 cut(s)	1199
Ama87I	CYCGRG	1 cut(s)	380
AoxI	GGCC	4 cut(s)	87, 370, 769, 846
ApeKI	GCWGC	7 cut(s)	413, 473, 612, 615, 749, 1238, 1304
ApoI	RAATTY	1 cut(s)	1120
Asp700I	GAANNNNTTC	2 cut(s)	488, 689
Asp718I	GGTACC	1 cut(s)	1088
AspS9I	GGNCC	1 cut(s)	361
AsuC2I	CCSGG	1 cut(s)	389
AsuHPI	GGTGA	4 cut(s)	112, 163, 635, 994
AvaI	CYCGRG	1 cut(s)	380
AvaII	GGWCC	1 cut(s)	361
BaeGI	GKGCMC	2 cut(s)	389, 904
BanI	GGYRCC	4 cut(s)	899, 1088, 1139, 1153
BanII	GRGCYC	2 cut(s)	234, 504
BarI	GAAGNNNNNNTAC	2 cut(s)	581, 613
BbsI	GAAGAC	2 cut(s)	124, 336
Bbv12I	GWGCWC	3 cut(s)	9, 234, 442
BbvI	GCAGC	7 cut(s)	400, 460, 599, 627, 736, 1225, 1291
BccI	CCATC	4 cut(s)	419, 527, 1003, 1025
BceAI	ACGGC	2 cut(s)	113, 756
BcgI	CGANNNNNNTGC	4 cut(s)	277, 311, 1089, 1123
BciT130I	CCWGG	2 cut(s)	344, 1158
BcnI	CCSGG	1 cut(s)	389
BcoDI	GTCTC	5 cut(s)	241, 652, 804, 1048, 1224
BfaI	CTAG	2 cut(s)	953, 1281
BfmI	CTRYAG	1 cut(s)	613
BfuAI	ACCTGC	1 cut(s)	1184
BglII	AGATCT	1 cut(s)	1277
Bme1390I	CCNGG	3 cut(s)	344, 389, 1158
Bme18I	GGWCC	1 cut(s)	361
BmeT110I	CYCGRG	1 cut(s)	380
BmgBI	CACGTC	1 cut(s)	1042
BmgT120I	GGNCC	1 cut(s)	361
BmiI	GGNNCC	6 cut(s)	363, 393, 901, 1090, 1141, 1155
BmrFI	CCNGG	3 cut(s)	344, 389, 1158
BmsI	GCATC	5 cut(s)	297, 340, 616, 1015, 1109
BpiI	GAAGAC	2 cut(s)	124, 336
BplI	GAGNNNNNCTC	2 cut(s)	221, 253
BpmI	CTGGAG	2 cut(s)	665, 1230
BpuEI	CTTGAG	2 cut(s)	299, 854
BpuMI	CCSGG	1 cut(s)	389
Bsa29I	ATCGAT	1 cut(s)	291
BsaHI	GRCGYC	1 cut(s)	96
BsaI	GGTCTC	1 cut(s)	652
BsaJI	CCNNGG	4 cut(s)	772, 849, 904, 1029
BsaXI	ACNNNNNCTCC	2 cut(s)	801, 831
Bsc4I	CCNNNNNNNGG	1 cut(s)	700
Bse118I	RCCGGY	1 cut(s)	14
Bse1I	ACTGG	6 cut(s)	625, 764, 886, 927, 964, 1101
Bse3DI	GCAATG	1 cut(s)	1233
BseBI	CCWGG	2 cut(s)	344, 1158
BseCI	ATCGAT	1 cut(s)	291
BseDI	CCNNGG	4 cut(s)	772, 849, 904, 1029
BseGI	GGATG	5 cut(s)	213, 355, 430, 642, 709
BseLI	CCNNNNNNNGG	1 cut(s)	700
BseMI	GCAATG	1 cut(s)	1233
BseMII	CTCAG	5 cut(s)	219, 468, 747, 989, 1059
BseNI	ACTGG	6 cut(s)	625, 764, 886, 927, 964, 1101
BseRI	GAGGAG	2 cut(s)	263, 1098
BseSI	GKGCMC	2 cut(s)	389, 904
BseXI	GCAGC	7 cut(s)	400, 460, 599, 627, 736, 1225, 1291
BseYI	CCCAGC	2 cut(s)	307, 584
BsgI	GTGCAG	1 cut(s)	399
Bsh1236I	CGCG	1 cut(s)	357
BshFI	GGCC	4 cut(s)	89, 372, 771, 848
BshNI	GGYRCC	4 cut(s)	899, 1088, 1139, 1153
BshVI	ATCGAT	1 cut(s)	291
BsiHKAI	GWGCWC	3 cut(s)	9, 234, 442
BsiHKCI	CYCGRG	1 cut(s)	380
BsiSI	CCGG	2 cut(s)	15, 389
BslFI	GGGAC	1 cut(s)	347
BslI	CCNNNNNNNGG	1 cut(s)	700
BsmAI	GTCTC	5 cut(s)	241, 652, 804, 1048, 1224
BsmBI	CGTCTC	2 cut(s)	241, 1048
BsmFI	GGGAC	1 cut(s)	347
BsnI	GGCC	4 cut(s)	89, 372, 771, 848
Bso31I	GGTCTC	1 cut(s)	652
BsoBI	CYCGRG	1 cut(s)	380
Bsp1286I	GDGCHC	6 cut(s)	9, 234, 389, 442, 504, 904
Bsp1407I	TGTACA	1 cut(s)	597
Bsp143I	GATC	5 cut(s)	189, 967, 1033, 1160, 1277
BspACI	CCGC	4 cut(s)	110, 369, 845, 1308
BspANI	GGCC	4 cut(s)	89, 372, 771, 848
BspCNI	CTCAG	5 cut(s)	220, 469, 746, 988, 1058
BspDI	ATCGAT	1 cut(s)	291
BspFNI	CGCG	1 cut(s)	357
BspLI	GGNNCC	6 cut(s)	363, 393, 901, 1090, 1141, 1155
BspMAI	CTGCAG	1 cut(s)	617
BspMI	ACCTGC	1 cut(s)	1184
BspPI	GGATC	4 cut(s)	184, 962, 1041, 1168
BspQI	GCTCTTC	1 cut(s)	492
BspT107I	GGYRCC	4 cut(s)	899, 1088, 1139, 1153
BspTNI	GGTCTC	1 cut(s)	652
BsrBI	CCGCTC	1 cut(s)	112
BsrDI	GCAATG	1 cut(s)	1233
BsrFI	RCCGGY	1 cut(s)	14
BsrGI	TGTACA	1 cut(s)	597
BsrI	ACTGG	6 cut(s)	625, 764, 886, 927, 964, 1101
BssAI	RCCGGY	1 cut(s)	14
BssECI	CCNNGG	4 cut(s)	772, 849, 904, 1029
BssMI	GATC	5 cut(s)	189, 967, 1033, 1160, 1277
BssNI	GRCGYC	1 cut(s)	96
BssT1I	CCWWGG	3 cut(s)	849, 904, 1029
Bst2UI	CCWGG	2 cut(s)	344, 1158
Bst4CI	ACNGT	3 cut(s)	568, 998, 1078
Bst6I	CTCTTC	2 cut(s)	149, 492
BstACI	GRCGYC	1 cut(s)	96
BstAUI	TGTACA	1 cut(s)	597
BstC8I	GCNNGC	5 cut(s)	9, 179, 355, 747, 1114
BstDEI	CTNAG	5 cut(s)	228, 477, 733, 975, 1045
BstDSI	CCRYGG	1 cut(s)	772
BstF5I	GGATG	5 cut(s)	213, 355, 430, 642, 709
BstFNI	CGCG	1 cut(s)	357
BstKTI	GATC	5 cut(s)	192, 970, 1036, 1163, 1280
BstMAI	GTCTC	5 cut(s)	241, 652, 804, 1048, 1224
BstMBI	GATC	5 cut(s)	189, 967, 1033, 1160, 1277
BstMWI	GCNNNNNNNGC	9 cut(s)	24, 95, 109, 410, 470, 865, 1205, 1238, 1304
BstNI	CCWGG	2 cut(s)	344, 1158
BstNSI	RCATGY	2 cut(s)	868, 926
BstSCI	CCNGG	3 cut(s)	342, 387, 1156
BstSFI	CTRYAG	1 cut(s)	613
BstSLI	GKGCMC	2 cut(s)	389, 904
BstUI	CGCG	1 cut(s)	357
BstV1I	GCAGC	7 cut(s)	400, 460, 599, 627, 736, 1225, 1291
BstV2I	GAAGAC	2 cut(s)	124, 336
BstX2I	RGATCY	4 cut(s)	189, 967, 1033, 1277
BstXI	CCANNNNNNTGG	1 cut(s)	526
BstYI	RGATCY	4 cut(s)	189, 967, 1033, 1277
Bsu15I	ATCGAT	1 cut(s)	291
BsuRI	GGCC	4 cut(s)	89, 372, 771, 848
BsuTUI	ATCGAT	1 cut(s)	291
BtgI	CCRYGG	1 cut(s)	772
BtgZI	GCGATG	1 cut(s)	1086
BtrI	CACGTC	1 cut(s)	1042
BtsCI	GGATG	5 cut(s)	213, 355, 430, 642, 709
BtsIMutI	CAGTG	4 cut(s)	618, 957, 994, 1053
BveI	ACCTGC	1 cut(s)	1184
Cac8I	GCNNGC	5 cut(s)	9, 179, 355, 747, 1114
CaiI	CAGNNNCTG	1 cut(s)	1199
Cfr10I	RCCGGY	1 cut(s)	14
Cfr13I	GGNCC	1 cut(s)	361
ClaI	ATCGAT	1 cut(s)	291
CseI	GACGC	2 cut(s)	104, 246
Csp6I	GTAC	3 cut(s)	598, 1089, 1270
CviQI	GTAC	3 cut(s)	598, 1089, 1270
DdeI	CTNAG	5 cut(s)	228, 477, 733, 975, 1045
DpnI	GATC	5 cut(s)	191, 969, 1035, 1162, 1279
DpnII	GATC	5 cut(s)	189, 967, 1033, 1160, 1277
DrdI	GACNNNNNNGTC	2 cut(s)	338, 704
DseDI	GACNNNNNNGTC	2 cut(s)	338, 704
EaeI	YGGCCR	1 cut(s)	370
Eam1104I	CTCTTC	2 cut(s)	149, 492
EarI	CTCTTC	2 cut(s)	149, 492
Ecl136II	GAGCTC	1 cut(s)	232
Eco130I	CCWWGG	3 cut(s)	849, 904, 1029
Eco147I	AGGCCT	1 cut(s)	89
Eco24I	GRGCYC	2 cut(s)	234, 504
Eco31I	GGTCTC	1 cut(s)	652
Eco47I	GGWCC	1 cut(s)	361
Eco53kI	GAGCTC	1 cut(s)	232
Eco57I	CTGAAG	1 cut(s)	545
Eco88I	CYCGRG	1 cut(s)	380
EcoICRI	GAGCTC	1 cut(s)	232
EcoRII	CCWGG	2 cut(s)	342, 1156
EcoT14I	CCWWGG	3 cut(s)	849, 904, 1029
EcoT38I	GRGCYC	2 cut(s)	234, 504
ErhI	CCWWGG	3 cut(s)	849, 904, 1029
Esp3I	CGTCTC	2 cut(s)	241, 1048
FaqI	GGGAC	1 cut(s)	347
FblI	GTMKAC	4 cut(s)	60, 267, 556, 948
FokI	GGATG	5 cut(s)	200, 362, 437, 649, 716
FriOI	GRGCYC	2 cut(s)	234, 504
FspBI	CTAG	2 cut(s)	953, 1281
GsaI	CCCAGC	2 cut(s)	311, 588
GsuI	CTGGAG	2 cut(s)	665, 1230
HaeIII	GGCC	4 cut(s)	89, 372, 771, 848
HapII	CCGG	2 cut(s)	15, 389
HgaI	GACGC	2 cut(s)	104, 246
Hin1I	GRCGYC	1 cut(s)	96
HincII	GTYRAC	2 cut(s)	61, 757
HindII	GTYRAC	2 cut(s)	61, 757
HinfI	GANTC	1 cut(s)	453
HpaII	CCGG	2 cut(s)	15, 389
HphI	GGTGA	4 cut(s)	112, 163, 635, 994
Hpy166II	GTNNAC	5 cut(s)	61, 268, 557, 757, 949
Hpy188I	TCNGA	7 cut(s)	94, 229, 303, 564, 736, 978, 1130
Hpy188III	TCNNGA	5 cut(s)	671, 682, 871, 965, 985
Hpy8I	GTNNAC	5 cut(s)	61, 268, 557, 757, 949
Hpy99I	CGWCG	4 cut(s)	62, 65, 98, 158
HpyAV	CCTTC	7 cut(s)	271, 289, 415, 761, 817, 1068, 1129
HpyCH4III	ACNGT	3 cut(s)	568, 998, 1078
HpyCH4IV	ACGT	2 cut(s)	666, 1041
HpyCH4V	TGCA	4 cut(s)	416, 615, 890, 920
HpyF10VI	GCNNNNNNNGC	9 cut(s)	24, 95, 109, 410, 470, 865, 1205, 1238, 1304
HpyF3I	CTNAG	5 cut(s)	228, 477, 733, 975, 1045
HpySE526I	ACGT	2 cut(s)	666, 1041
Hsp92I	GRCGYC	1 cut(s)	96
KpnI	GGTACC	1 cut(s)	1092
Kzo9I	GATC	5 cut(s)	189, 967, 1033, 1160, 1277
LguI	GCTCTTC	1 cut(s)	492
LmnI	GCTCC	2 cut(s)	4, 856
Lsp1109I	GCAGC	7 cut(s)	400, 460, 599, 627, 736, 1225, 1291
LweI	GCATC	5 cut(s)	297, 340, 616, 1015, 1109
MaeI	CTAG	2 cut(s)	953, 1281
MaeII	ACGT	2 cut(s)	666, 1041
MaeIII	GTNAC	5 cut(s)	722, 817, 929, 1048, 1291
MalI	GATC	5 cut(s)	191, 969, 1035, 1162, 1279
MbiI	CCGCTC	1 cut(s)	112
MboI	GATC	5 cut(s)	189, 967, 1033, 1160, 1277
MfeI	CAATTG	1 cut(s)	891
MflI	RGATCY	4 cut(s)	189, 967, 1033, 1277
MhlI	GDGCHC	6 cut(s)	9, 234, 389, 442, 504, 904
MluCI	AATT	3 cut(s)	508, 891, 1120
MmeI	TCCRAC	2 cut(s)	117, 222
MroXI	GAANNNNTTC	2 cut(s)	488, 689
MseI	TTAA	2 cut(s)	861, 1254
MslI	CAYNNNNRTG	2 cut(s)	524, 1007
MspA1I	CMGCKG	2 cut(s)	177, 1298
MspI	CCGG	2 cut(s)	15, 389
MspR9I	CCNGG	3 cut(s)	344, 389, 1158
MunI	CAATTG	1 cut(s)	891
MvaI	CCWGG	2 cut(s)	344, 1158
MvnI	CGCG	1 cut(s)	357
MwoI	GCNNNNNNNGC	9 cut(s)	24, 95, 109, 410, 470, 865, 1205, 1238, 1304
NciI	CCSGG	1 cut(s)	389
NdeII	GATC	5 cut(s)	189, 967, 1033, 1160, 1277
NlaIV	GGNNCC	6 cut(s)	363, 393, 901, 1090, 1141, 1155
NmuCI	GTSAC	3 cut(s)	817, 1048, 1291
NspI	RCATGY	2 cut(s)	868, 926
PaeR7I	CTCGAG	1 cut(s)	380
PaqCI	CACCTGC	1 cut(s)	1184
PceI	AGGCCT	1 cut(s)	89
PciSI	GCTCTTC	1 cut(s)	492
PdmI	GAANNNNTTC	2 cut(s)	488, 689
PfeI	GAWTC	1 cut(s)	453
PfoI	TCCNGGA	1 cut(s)	342
Psp124BI	GAGCTC	1 cut(s)	234
Psp1406I	AACGTT	1 cut(s)	666
Psp6I	CCWGG	2 cut(s)	342, 1156
PspFI	CCCAGC	2 cut(s)	307, 584
PspGI	CCWGG	2 cut(s)	342, 1156
PspN4I	GGNNCC	6 cut(s)	363, 393, 901, 1090, 1141, 1155
PspPI	GGNCC	1 cut(s)	361
PspXI	VCTCGAGB	1 cut(s)	380
PsrI	GAACNNNNNNTAC	2 cut(s)	590, 622
PstI	CTGCAG	1 cut(s)	617
PstNI	CAGNNNCTG	1 cut(s)	1199
PsuI	RGATCY	4 cut(s)	189, 967, 1033, 1277
PvuII	CAGCTG	2 cut(s)	177, 1298
RsaI	GTAC	3 cut(s)	599, 1090, 1271
RsaNI	GTAC	3 cut(s)	598, 1089, 1270
RseI	CAYNNNNRTG	2 cut(s)	524, 1007
SacI	GAGCTC	1 cut(s)	234
SalI	GTCGAC	1 cut(s)	59
SapI	GCTCTTC	1 cut(s)	492
SaqAI	TTAA	2 cut(s)	861, 1254
Sau3AI	GATC	5 cut(s)	189, 967, 1033, 1160, 1277
Sau96I	GGNCC	1 cut(s)	361
ScrFI	CCNGG	3 cut(s)	344, 389, 1158
SduI	GDGCHC	6 cut(s)	9, 234, 389, 442, 504, 904
SfaNI	GCATC	5 cut(s)	297, 340, 616, 1015, 1109
SfcI	CTRYAG	1 cut(s)	613
Sfr274I	CTCGAG	1 cut(s)	380
SgrDI	CGTCGACG	1 cut(s)	59
SinI	GGWCC	1 cut(s)	361
SlaI	CTCGAG	1 cut(s)	380
SmiMI	CAYNNNNRTG	2 cut(s)	524, 1007
SmlI	CTYRAG	3 cut(s)	314, 380, 869
SmoI	CTYRAG	3 cut(s)	314, 380, 869
Sse9I	AATT	3 cut(s)	508, 891, 1120
SseBI	AGGCCT	1 cut(s)	89
SsiI	CCGC	4 cut(s)	110, 369, 845, 1308
SspMI	CTAG	2 cut(s)	953, 1281
SstI	GAGCTC	1 cut(s)	234
StuI	AGGCCT	1 cut(s)	89
StyD4I	CCNGG	3 cut(s)	342, 387, 1156
StyI	CCWWGG	3 cut(s)	849, 904, 1029
TaaI	ACNGT	3 cut(s)	568, 998, 1078
TaiI	ACGT	2 cut(s)	669, 1044
TaqI	TCGA	5 cut(s)	60, 291, 381, 672, 984
TasI	AATT	3 cut(s)	508, 891, 1120
TatI	WGTACW	2 cut(s)	597, 1269
TauI	GCSGC	4 cut(s)	112, 372, 848, 1310
TfiI	GAWTC	1 cut(s)	453
Tru1I	TTAA	2 cut(s)	861, 1254
Tru9I	TTAA	2 cut(s)	861, 1254
TscAI	CASTG	4 cut(s)	625, 964, 1001, 1053
TseFI	GTSAC	3 cut(s)	817, 1048, 1291
TseI	GCWGC	7 cut(s)	413, 473, 612, 615, 749, 1238, 1304
Tsp45I	GTSAC	3 cut(s)	817, 1048, 1291
TspDTI	ATGAA	3 cut(s)	481, 653, 1280
TspGWI	ACGGA	2 cut(s)	142, 182
TspRI	CASTG	4 cut(s)	625, 964, 1001, 1053
VpaK11BI	GGWCC	1 cut(s)	361
XapI	RAATTY	1 cut(s)	1120
XceI	RCATGY	2 cut(s)	868, 926
XcmI	CCANNNNNNNNNTGG	1 cut(s)	247
XhoI	CTCGAG	1 cut(s)	380
XmiI	GTMKAC	4 cut(s)	60, 267, 556, 948
XmnI	GAANNNNTTC	2 cut(s)	488, 689
XspI	CTAG	2 cut(s)	953, 1281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.