Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Forward (+)

26474303 .. 26476087

Gene Structure 1785 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00187090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGAAGTCGGAAAGAGATCGGGGATGGAGCACAACACCAAGTCAGGCAAGCCTTTAAAAATGAAAGTCAAGTTTGTCGACGATGAAAAGGATGTCGTCAAAGCCACAGACGCCTTGCCTCTGCCACTATACCTGACAAATGCGGTCTTCTTCACTCTCTTTTTCTCCGTTGTCTACTTCTTGCTCACAAGCTGGCGTGAGAAGATACGTACCAACACTCCTCTTCATGTCATAGATCTCTCCGAGATCGTTGCGATCATTGCATTTGTAGCATCCTTCATCTACCTCCTTGGCTTCTTCGGCATGGATTTCGTTCAGTCCCTCATTCTCCAGCCCAGTAATGACGTTTGGGCTGCCGACGATGATGAAGAGATTATTCTTAAGGAGGATGCTCGCAAAATCCCTTGTGGCCAGGCCATTGATTGTTCAATTCCCACAATGGCTCCGATTGCTTCACCAAAAGCTGTTCCTAAAGTTGCCCCAAAAGTGTTTGAAGAAAAGCCAATGATCGAGACACCACCACCTACTGAAAAAGACGAAGAGATTATAAAGGCAGTGGTTGCTGGAACCATTCCTTCATACTCACTCGAGTCAAAGCTCGGCGACTGCAAGAGGGCAGCTTCTATTAGGCGTGAGGCTTTGCAGAGAGTTACAGGCAAGTCTTTGGAGGGGTTGCCTTTGGAAGGCTTTGATTACGAGTCCATCTTGGGTCAGTGTTGCGAAATGCCAGTTGGGTATATTACCATTCCTGTCGGGATTGCTGGGCCTCTCAAGCTTGATGGAAGAGAGTTCCCTGTCCCCATGGCCACCACTGAAGGTACCTTGGTGGCGAGTACCAACCGCGGTTGCAAAGCTATTAACTTGTCTGGTGGAGCTTCAAGTGTGCTATTGAAAGATGGAATGACCAGAGCTCCTGTTGTCAGATTCAACTCTGCTAAAAGAGCTGCTGAGTTGAAGTTCTTCATGGAAGACCCTGCCAATTATGAAACCATTTCCATGGTTTTCAACAAATCAAGCCGATTCGGTAGACTTCAGACAGTCAAGTGTGCCGTTGCTGGGAAGAACCTGTACATGAGATTCTGCTGCAGCACCGGTGATGCTATGGGGATGAACATGGTCTCTAAAGGTGTTCAAAACGTTCTTGATTTCCTCCAGAATGACTTCCCTGACATGGATGTCATTGGCATTTCTGGTAACTACTGCTCAGACAAAAAGCCTGCTGCTGTTAACTGGATTGAAGGTCGTGGAAAATCTGTGGTTTGTGAGGCCGTGATCAAGGGAGACATAGTGACAAAGGTGTTGAAAACCAACGTGGCGGCCTTGGTGGAGCTTAACATGCTCAAGAACCTTACTGGTTCTGCCATGGCTGGTGCTCTTGGTGGGTTCAATGCTCATGCCAGTAACATTGTTTCTGCAGTCTACCTTGCAACTGGCCAAGACCCTGCTCAGAACATCGAGAGTTCTCACTGCATCACCATGATGGAAGCCATCAATGATGGAAAGGATCTTCACGTCTCTGTAACCATGCCTTCTATTGAAGTTGGTACAGTAGGAGGAGGTACCCAACTTGCATCGCAGTCGGCTTGTTTAAACTTGCTTGGAGTCAAGGGTGCTAACAGAGAGGCACCAGGATCAAACGCAAGGCAGTTGGCAAGTGTTGTGGCTGGTTCTGTTCTTGCTGGAGAGCTATCTCTGATGTCAGCTATTGCAGCTGGTCAACTTGTTAAGAGCCACATGAAGTACAACCGATCGAGCAAAGATGTCACAACTGTTGCTTCCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

594

Amino Acids

63.58

Weight (kDa)

6.63

Isoelectric Point (pI)

33.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	207 - 583	2.5e-145	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	548
AasI	GACNNNNNNGTC	1 cut(s)	1175
Acc65I	GGTACC	2 cut(s)	818, 1559
AccB1I	GGYRCC	3 cut(s)	818, 1559, 1624
AccI	GTMKAC	4 cut(s)	78, 174, 1027, 1419
AccII	CGCG	1 cut(s)	843
AciI	CCGC	4 cut(s)	143, 841, 843, 1316
AclI	AACGTT	1 cut(s)	1137
AclWI	GGATC	2 cut(s)	1512, 1639
AcoI	YGGCCR	3 cut(s)	409, 804, 1432
AcuI	CTGAAG	2 cut(s)	834, 1016
AcyI	GRCGYC	1 cut(s)	111
AfaI	GTAC	7 cut(s)	211, 820, 835, 1070, 1546, 1561, 1742
AfiI	CCNNNNNNNGG	3 cut(s)	683, 1056, 1171
AflII	CTTAAG	1 cut(s)	380
AgeI	ACCGGT	1 cut(s)	1091
AjiI	CACGTC	1 cut(s)	1513
AjnI	CCWGG	2 cut(s)	411, 1627
AjuI	GAANNNNNNNTTGG	2 cut(s)	714, 746
Alw21I	GWGCWC	3 cut(s)	33, 913, 1375
Alw26I	GTCTC	4 cut(s)	506, 1123, 1275, 1519
AlwI	GGATC	2 cut(s)	1512, 1639
Ama87I	CYCGRG	1 cut(s)	587
AoxI	GGCC	7 cut(s)	409, 414, 764, 804, 1266, 1317, 1432
ApeKI	GCWGC	7 cut(s)	353, 617, 944, 1083, 1086, 1220, 1709
AsiGI	ACCGGT	1 cut(s)	1091
Asp700I	GAANNNNTTC	2 cut(s)	959, 1160
Asp718I	GGTACC	2 cut(s)	818, 1559
AspS9I	GGNCC	1 cut(s)	764
AsuHPI	GGTGA	3 cut(s)	447, 1106, 1465
AvaI	CYCGRG	1 cut(s)	587
BaeI	ACNNNNGTAYC	2 cut(s)	810, 843
BalI	TGGCCA	3 cut(s)	411, 806, 1434
BanI	GGYRCC	3 cut(s)	818, 1559, 1624
BanII	GRGCYC	1 cut(s)	913
BarI	GAAGNNNNNNTAC	2 cut(s)	1052, 1084
BbsI	GAAGAC	2 cut(s)	139, 975
Bbv12I	GWGCWC	3 cut(s)	33, 913, 1375
BbvI	GCAGC	7 cut(s)	340, 629, 931, 1070, 1098, 1207, 1721
BccI	CCATC	7 cut(s)	19, 710, 773, 890, 1474, 1490, 1496
BceAI	ACGGC	2 cut(s)	1034, 1253
BcgI	CGANNNNNNTGC	6 cut(s)	233, 267, 292, 326, 1560, 1594
BciT130I	CCWGG	2 cut(s)	413, 1629
BclI	TGATCA	1 cut(s)	1272
BcoDI	GTCTC	4 cut(s)	506, 1123, 1275, 1519
BfmI	CTRYAG	2 cut(s)	1084, 1413
BfrI	CTTAAG	1 cut(s)	380
BglII	AGATCT	1 cut(s)	235
BisI	GCNGC	8 cut(s)	354, 618, 945, 1084, 1087, 1221, 1317, 1710
BlsI	GCNGC	8 cut(s)	355, 619, 946, 1085, 1088, 1222, 1318, 1711
Bme1390I	CCNGG	2 cut(s)	413, 1629
BmeT110I	CYCGRG	1 cut(s)	587
BmgBI	CACGTC	1 cut(s)	1513
BmgT120I	GGNCC	1 cut(s)	764
BmiI	GGNNCC	5 cut(s)	444, 568, 820, 1561, 1626
BmrFI	CCNGG	2 cut(s)	413, 1629
BmrI	ACTGGG	1 cut(s)	330
BmsI	GCATC	5 cut(s)	281, 379, 1087, 1479, 1580
BmuI	ACTGGG	1 cut(s)	330
BpiI	GAAGAC	2 cut(s)	139, 975
BpmI	CTGGAG	3 cut(s)	314, 1136, 1701
BpuEI	CTTGAG	2 cut(s)	755, 1325
BsaAI	YACGTR	1 cut(s)	209
BsaHI	GRCGYC	1 cut(s)	111
BsaI	GGTCTC	1 cut(s)	1123
BsaJI	CCNNGG	7 cut(s)	289, 801, 822, 841, 996, 1320, 1362
BsaWI	WCCGGW	1 cut(s)	1091
BsaXI	ACNNNNNCTCC	8 cut(s)	202, 232, 427, 457, 895, 925, 1272, 1302
Bsc4I	CCNNNNNNNGG	3 cut(s)	683, 1056, 1171
Bse118I	RCCGGY	1 cut(s)	1091
Bse1I	ACTGG	6 cut(s)	336, 728, 1235, 1357, 1398, 1435
Bse3DI	GCAATG	1 cut(s)	258
BseBI	CCWGG	2 cut(s)	413, 1629
BseDI	CCNNGG	7 cut(s)	289, 801, 822, 841, 996, 1320, 1362
BseGI	GGATG	6 cut(s)	30, 97, 272, 394, 1113, 1180
BseLI	CCNNNNNNNGG	3 cut(s)	683, 1056, 1171
BseMI	GCAATG	1 cut(s)	258
BseMII	CTCAG	3 cut(s)	939, 1218, 1460
BseNI	ACTGG	6 cut(s)	336, 728, 1235, 1357, 1398, 1435
BseRI	GAGGAG	2 cut(s)	210, 1569
BseXI	GCAGC	7 cut(s)	340, 629, 931, 1070, 1098, 1207, 1721
BseYI	CCCAGC	2 cut(s)	761, 1055
Bsh1236I	CGCG	1 cut(s)	843
Bsh1285I	CGRYCG	1 cut(s)	1751
BshFI	GGCC	7 cut(s)	411, 416, 766, 806, 1268, 1319, 1434
BshNI	GGYRCC	3 cut(s)	818, 1559, 1624
BshTI	ACCGGT	1 cut(s)	1091
BsiEI	CGRYCG	1 cut(s)	1751
BsiHKAI	GWGCWC	3 cut(s)	33, 913, 1375
BsiHKCI	CYCGRG	1 cut(s)	587
BsiSI	CCGG	1 cut(s)	1092
BslFI	GGGAC	2 cut(s)	304, 782
BslI	CCNNNNNNNGG	3 cut(s)	683, 1056, 1171
BsmAI	GTCTC	4 cut(s)	506, 1123, 1275, 1519
BsmBI	CGTCTC	1 cut(s)	1519
BsmFI	GGGAC	2 cut(s)	304, 782
BsnI	GGCC	7 cut(s)	411, 416, 766, 806, 1268, 1319, 1434
Bso31I	GGTCTC	1 cut(s)	1123
BsoBI	CYCGRG	1 cut(s)	587
Bsp1286I	GDGCHC	3 cut(s)	33, 913, 1375
Bsp1407I	TGTACA	1 cut(s)	1068
Bsp143I	GATC	9 cut(s)	17, 235, 246, 255, 507, 1272, 1504, 1631, 1748
Bsp19I	CCATGG	3 cut(s)	801, 996, 1362
BspACI	CCGC	4 cut(s)	143, 841, 843, 1316
BspANI	GGCC	7 cut(s)	411, 416, 766, 806, 1268, 1319, 1434
BspCNI	CTCAG	3 cut(s)	940, 1217, 1459
BspFNI	CGCG	1 cut(s)	843
BspLI	GGNNCC	5 cut(s)	444, 568, 820, 1561, 1626
BspMAI	CTGCAG	2 cut(s)	1088, 1417
BspPI	GGATC	2 cut(s)	1512, 1639
BspT107I	GGYRCC	3 cut(s)	818, 1559, 1624
BspTI	CTTAAG	1 cut(s)	380
BspTNI	GGTCTC	1 cut(s)	1123
BsrDI	GCAATG	1 cut(s)	258
BsrFI	RCCGGY	1 cut(s)	1091
BsrGI	TGTACA	1 cut(s)	1068
BsrI	ACTGG	6 cut(s)	336, 728, 1235, 1357, 1398, 1435
BssAI	RCCGGY	1 cut(s)	1091
BssECI	CCNNGG	7 cut(s)	289, 801, 822, 841, 996, 1320, 1362
BssMI	GATC	9 cut(s)	17, 235, 246, 255, 507, 1272, 1504, 1631, 1748
BssNI	GRCGYC	1 cut(s)	111
BssT1I	CCWWGG	6 cut(s)	289, 801, 822, 996, 1320, 1362
Bst2UI	CCWGG	2 cut(s)	413, 1629
Bst4CI	ACNGT	3 cut(s)	1039, 1549, 1771
Bst6I	CTCTTC	4 cut(s)	228, 363, 534, 778
BstACI	GRCGYC	1 cut(s)	111
BstAFI	CTTAAG	1 cut(s)	380
BstAPI	GCANNNNNTGC	1 cut(s)	560
BstAUI	TGTACA	1 cut(s)	1068
BstBAI	YACGTR	1 cut(s)	209
BstC8I	GCNNGC	4 cut(s)	50, 194, 394, 1218
BstDEI	CTNAG	3 cut(s)	948, 1204, 1446
BstDSI	CCRYGG	4 cut(s)	801, 841, 996, 1362
BstENI	CCTNNNNNAGG	1 cut(s)	681
BstF5I	GGATG	6 cut(s)	30, 97, 272, 394, 1113, 1180
BstFNI	CGCG	1 cut(s)	843
BstKTI	GATC	9 cut(s)	20, 238, 249, 258, 510, 1275, 1507, 1634, 1751
BstMAI	GTCTC	4 cut(s)	506, 1123, 1275, 1519
BstMBI	GATC	9 cut(s)	17, 235, 246, 255, 507, 1272, 1504, 1631, 1748
BstMCI	CGRYCG	1 cut(s)	1751
BstNI	CCWGG	2 cut(s)	413, 1629
BstNSI	RCATGY	1 cut(s)	1339
BstSCI	CCNGG	2 cut(s)	411, 1627
BstSFI	CTRYAG	2 cut(s)	1084, 1413
BstSNI	TACGTA	1 cut(s)	209
BstUI	CGCG	1 cut(s)	843
BstV1I	GCAGC	7 cut(s)	340, 629, 931, 1070, 1098, 1207, 1721
BstV2I	GAAGAC	2 cut(s)	139, 975
BstX2I	RGATCY	2 cut(s)	235, 1504
BstXI	CCANNNNNNTGG	1 cut(s)	997
BstYI	RGATCY	2 cut(s)	235, 1504
BsuRI	GGCC	7 cut(s)	411, 416, 766, 806, 1268, 1319, 1434
BtgI	CCRYGG	4 cut(s)	801, 841, 996, 1362
BtgZI	GCGATG	1 cut(s)	1557
BtrI	CACGTC	1 cut(s)	1513
BtsCI	GGATG	6 cut(s)	30, 97, 272, 394, 1113, 1180
BtsI	GCAGTG	2 cut(s)	561, 1465
BtsIMutI	CAGTG	4 cut(s)	561, 719, 810, 1465
Cac8I	GCNNGC	4 cut(s)	50, 194, 394, 1218
Cfr10I	RCCGGY	1 cut(s)	1091
Cfr13I	GGNCC	1 cut(s)	764
Cfr42I	CCGCGG	1 cut(s)	844
CseI	GACGC	1 cut(s)	119
Csp6I	GTAC	7 cut(s)	210, 819, 834, 1069, 1545, 1560, 1741
CspAI	ACCGGT	1 cut(s)	1091
CspCI	CAANNNNNGTGG	2 cut(s)	1641, 1676
CviQI	GTAC	7 cut(s)	210, 819, 834, 1069, 1545, 1560, 1741
DdeI	CTNAG	3 cut(s)	948, 1204, 1446
DpnI	GATC	9 cut(s)	19, 237, 248, 257, 509, 1274, 1506, 1633, 1750
DpnII	GATC	9 cut(s)	17, 235, 246, 255, 507, 1272, 1504, 1631, 1748
DraI	TTTAAA	2 cut(s)	57, 1590
DrdI	GACNNNNNNGTC	1 cut(s)	1175
DseDI	GACNNNNNNGTC	1 cut(s)	1175
EaeI	YGGCCR	3 cut(s)	409, 804, 1432
Eam1104I	CTCTTC	4 cut(s)	228, 363, 534, 778
EarI	CTCTTC	4 cut(s)	228, 363, 534, 778
Ecl136II	GAGCTC	1 cut(s)	911
Eco105I	TACGTA	1 cut(s)	209
Eco130I	CCWWGG	6 cut(s)	289, 801, 822, 996, 1320, 1362
Eco24I	GRGCYC	1 cut(s)	913
Eco31I	GGTCTC	1 cut(s)	1123
Eco53kI	GAGCTC	1 cut(s)	911
Eco57I	CTGAAG	2 cut(s)	834, 1016
Eco88I	CYCGRG	1 cut(s)	587
EcoICRI	GAGCTC	1 cut(s)	911
EcoNI	CCTNNNNNAGG	1 cut(s)	681
EcoRII	CCWGG	2 cut(s)	411, 1627
EcoT14I	CCWWGG	6 cut(s)	289, 801, 822, 996, 1320, 1362
EcoT38I	GRGCYC	1 cut(s)	913
ErhI	CCWWGG	6 cut(s)	289, 801, 822, 996, 1320, 1362
Esp3I	CGTCTC	1 cut(s)	1519
FaqI	GGGAC	2 cut(s)	304, 782
FbaI	TGATCA	1 cut(s)	1272
FblI	GTMKAC	4 cut(s)	78, 174, 1027, 1419
Fnu4HI	GCNGC	8 cut(s)	354, 618, 945, 1084, 1087, 1221, 1317, 1710
FokI	GGATG	6 cut(s)	37, 104, 259, 401, 1120, 1187
FriOI	GRGCYC	1 cut(s)	913
Fsp4HI	GCNGC	8 cut(s)	354, 618, 945, 1084, 1087, 1221, 1317, 1710
GluI	GCNGC	8 cut(s)	354, 618, 945, 1084, 1087, 1221, 1317, 1710
GsaI	CCCAGC	2 cut(s)	765, 1059
GsuI	CTGGAG	3 cut(s)	314, 1136, 1701
HaeIII	GGCC	7 cut(s)	411, 416, 766, 806, 1268, 1319, 1434
HapII	CCGG	1 cut(s)	1092
HgaI	GACGC	1 cut(s)	119
Hin1I	GRCGYC	1 cut(s)	111
HincII	GTYRAC	3 cut(s)	79, 1228, 1718
HindII	GTYRAC	3 cut(s)	79, 1228, 1718
HindIII	AAGCTT	1 cut(s)	773
HinfI	GANTC	6 cut(s)	590, 698, 924, 1020, 1077, 1602
HpaI	GTTAAC	1 cut(s)	1228
HpaII	CCGG	1 cut(s)	1092
HphI	GGTGA	3 cut(s)	447, 1106, 1465
Hpy166II	GTNNAC	6 cut(s)	79, 175, 1028, 1228, 1420, 1718
Hpy188I	TCNGA	8 cut(s)	11, 244, 447, 923, 1035, 1207, 1449, 1695
Hpy188III	TCNNGA	6 cut(s)	511, 754, 1142, 1153, 1342, 1456
Hpy8I	GTNNAC	6 cut(s)	79, 175, 1028, 1228, 1420, 1718
Hpy99I	CGWCG	2 cut(s)	83, 362
HpyAV	CCTTC	6 cut(s)	286, 585, 677, 809, 1232, 1539
HpyCH4III	ACNGT	3 cut(s)	1039, 1549, 1771
HpyCH4IV	ACGT	5 cut(s)	208, 345, 1137, 1311, 1512
HpyF3I	CTNAG	3 cut(s)	948, 1204, 1446
HpySE526I	ACGT	5 cut(s)	208, 345, 1137, 1311, 1512
Hsp92I	GRCGYC	1 cut(s)	111
KpnI	GGTACC	2 cut(s)	822, 1563
Ksp22I	TGATCA	1 cut(s)	1272
KspAI	GTTAAC	1 cut(s)	1228
KspI	CCGCGG	1 cut(s)	844
Kzo9I	GATC	9 cut(s)	17, 235, 246, 255, 507, 1272, 1504, 1631, 1748
LmnI	GCTCC	5 cut(s)	28, 448, 872, 916, 1327
Lsp1109I	GCAGC	7 cut(s)	340, 629, 931, 1070, 1098, 1207, 1721
LweI	GCATC	5 cut(s)	281, 379, 1087, 1479, 1580
MaeII	ACGT	5 cut(s)	208, 345, 1137, 1311, 1512
MaeIII	GTNAC	6 cut(s)	649, 1193, 1288, 1400, 1519, 1762
MalI	GATC	9 cut(s)	19, 237, 248, 257, 509, 1274, 1506, 1633, 1750
MboI	GATC	9 cut(s)	17, 235, 246, 255, 507, 1272, 1504, 1631, 1748
MflI	RGATCY	2 cut(s)	235, 1504
MhlI	GDGCHC	3 cut(s)	33, 913, 1375
MlsI	TGGCCA	3 cut(s)	411, 806, 1434
MluCI	AATT	2 cut(s)	429, 979
MluNI	TGGCCA	3 cut(s)	411, 806, 1434
MlyI	GAGTC	3 cut(s)	599, 707, 1611
Mox20I	TGGCCA	3 cut(s)	411, 806, 1434
MroXI	GAANNNNTTC	2 cut(s)	959, 1160
MscI	TGGCCA	3 cut(s)	411, 806, 1434
MseI	TTAA	8 cut(s)	56, 381, 858, 1227, 1332, 1589, 1725, 1783
MslI	CAYNNNNRTG	3 cut(s)	995, 1475, 1478
Msp20I	TGGCCA	3 cut(s)	411, 806, 1434
MspA1I	CMGCKG	2 cut(s)	843, 1712
MspCI	CTTAAG	1 cut(s)	380
MspI	CCGG	1 cut(s)	1092
MspR9I	CCNGG	2 cut(s)	413, 1629
MssI	GTTTAAAC	1 cut(s)	1590
MvaI	CCWGG	2 cut(s)	413, 1629
MvnI	CGCG	1 cut(s)	843
NcoI	CCATGG	3 cut(s)	801, 996, 1362
NdeII	GATC	9 cut(s)	17, 235, 246, 255, 507, 1272, 1504, 1631, 1748
NlaIV	GGNNCC	5 cut(s)	444, 568, 820, 1561, 1626
NmeAIII	GCCGAG	1 cut(s)	579
NmuCI	GTSAC	2 cut(s)	1288, 1762
NspI	RCATGY	1 cut(s)	1339
PaeR7I	CTCGAG	1 cut(s)	587
PdmI	GAANNNNTTC	2 cut(s)	959, 1160
PfeI	GAWTC	3 cut(s)	924, 1020, 1077
PinAI	ACCGGT	1 cut(s)	1091
PkrI	GCNGC	8 cut(s)	355, 619, 946, 1085, 1088, 1222, 1318, 1711
Ple19I	CGATCG	1 cut(s)	1751
PleI	GAGTC	3 cut(s)	598, 706, 1610
PmeI	GTTTAAAC	1 cut(s)	1590
PpsI	GAGTC	3 cut(s)	598, 706, 1610
Ppu21I	YACGTR	1 cut(s)	209
PsiI	TTATAA	1 cut(s)	548
Psp124BI	GAGCTC	1 cut(s)	913
Psp1406I	AACGTT	1 cut(s)	1137
Psp6I	CCWGG	2 cut(s)	411, 1627
PspFI	CCCAGC	2 cut(s)	761, 1055
PspGI	CCWGG	2 cut(s)	411, 1627
PspN4I	GGNNCC	5 cut(s)	444, 568, 820, 1561, 1626
PspPI	GGNCC	1 cut(s)	764
PspXI	VCTCGAGB	1 cut(s)	587
PstI	CTGCAG	2 cut(s)	1088, 1417
PsuI	RGATCY	2 cut(s)	235, 1504
PvuI	CGATCG	1 cut(s)	1751
PvuII	CAGCTG	1 cut(s)	1712
RsaI	GTAC	7 cut(s)	211, 820, 835, 1070, 1546, 1561, 1742
RsaNI	GTAC	7 cut(s)	210, 819, 834, 1069, 1545, 1560, 1741
RseI	CAYNNNNRTG	3 cut(s)	995, 1475, 1478
SacI	GAGCTC	1 cut(s)	913
SacII	CCGCGG	1 cut(s)	844
SalI	GTCGAC	1 cut(s)	77
SaqAI	TTAA	8 cut(s)	56, 381, 858, 1227, 1332, 1589, 1725, 1783
SatI	GCNGC	8 cut(s)	354, 618, 945, 1084, 1087, 1221, 1317, 1710
Sau3AI	GATC	9 cut(s)	17, 235, 246, 255, 507, 1272, 1504, 1631, 1748
Sau96I	GGNCC	1 cut(s)	764
SchI	GAGTC	3 cut(s)	599, 707, 1611
ScrFI	CCNGG	2 cut(s)	413, 1629
SduI	GDGCHC	3 cut(s)	33, 913, 1375
SfaNI	GCATC	5 cut(s)	281, 379, 1087, 1479, 1580
SfcI	CTRYAG	2 cut(s)	1084, 1413
Sfr274I	CTCGAG	1 cut(s)	587
Sfr303I	CCGCGG	1 cut(s)	844
SgrAI	CRCCGGYG	1 cut(s)	1091
SgrBI	CCGCGG	1 cut(s)	844
SlaI	CTCGAG	1 cut(s)	587
SmiMI	CAYNNNNRTG	3 cut(s)	995, 1475, 1478
SmlI	CTYRAG	4 cut(s)	380, 587, 770, 1340
SmoI	CTYRAG	4 cut(s)	380, 587, 770, 1340
SnaBI	TACGTA	1 cut(s)	209
Sse9I	AATT	2 cut(s)	429, 979
SsiI	CCGC	4 cut(s)	143, 841, 843, 1316
SstI	GAGCTC	1 cut(s)	913
StyD4I	CCNGG	2 cut(s)	411, 1627
StyI	CCWWGG	6 cut(s)	289, 801, 822, 996, 1320, 1362
TaaI	ACNGT	3 cut(s)	1039, 1549, 1771
TaiI	ACGT	5 cut(s)	211, 348, 1140, 1314, 1515
TaqI	TCGA	5 cut(s)	78, 510, 588, 1455, 1751
TasI	AATT	2 cut(s)	429, 979
TatI	WGTACW	2 cut(s)	1068, 1740
TauI	GCSGC	1 cut(s)	1319
TfiI	GAWTC	3 cut(s)	924, 1020, 1077
Tru1I	TTAA	8 cut(s)	56, 381, 858, 1227, 1332, 1589, 1725, 1783
Tru9I	TTAA	8 cut(s)	56, 381, 858, 1227, 1332, 1589, 1725, 1783
TscAI	CASTG	4 cut(s)	561, 719, 817, 1472
TseFI	GTSAC	2 cut(s)	1288, 1762
TseI	GCWGC	7 cut(s)	353, 617, 944, 1083, 1086, 1220, 1709
Tsp45I	GTSAC	2 cut(s)	1288, 1762
TspGWI	ACGGA	1 cut(s)	157
TspRI	CASTG	4 cut(s)	561, 719, 817, 1472
Vha464I	CTTAAG	1 cut(s)	380
XagI	CCTNNNNNAGG	1 cut(s)	681
XceI	RCATGY	1 cut(s)	1339
XhoI	CTCGAG	1 cut(s)	587
XmiI	GTMKAC	4 cut(s)	78, 174, 1027, 1419
XmnI	GAANNNNTTC	2 cut(s)	959, 1160

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.