Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Reverse (-)

44598919 .. 44600973

Gene Structure 2055 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25229

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGGAGCACGGAGGAAAGCCCATGAAAATGAAAGTCAAGTTTGTCGACGATCAAGTCCCAAAGGCCTCAGCCTCAGACGCCATGTCTCTCCCTCTCTACATAACCAACGCTGTGTTTTTCACCCTCTTCTTCTCCGTTGTCTACTTCTTGCTCACTAGCTGGCGCGAGAAGATCCGTACCAATACTCCTCTTCACATGATTGATCTCTCTGAGATTGTTGCCATCCTTGCTCTTGTAGCCTCCTTCATCTATCTCCTCGGCTTCTTCGGCATCGATTTTGTTCAGTCCCTCTTTCTCCAGCCCAGTAGTGACATCTGGGCCGCCGACGATGACGAGGAAGAGATTATTCTCAAGGAGGATGCTCGTAAGGTTCCTTGCGGCCAGGCCCTTGATTGTTCAATTCCCAAAATTGCTCCAATTGCTTCACCTAAAGTTACCCACAAGGTGTCTTATGAAAAGCCAGCGATCGAGATTCCACCACCGACTGCAGAAGACGAAGAGATTATCAAGGCCGTGGTTGCCGGAACCATTCCTTCATACTCACTTGAGTCAAAGCTCGGTGATTGCAAGAGAGCAGCTTCTATTAGGCGTGAGGCTTTGCAGAGAGTTACAGGCAAGTCTTTGGAGGGTTTGCCTTTGGAGGGCTTTGATTATGAGTCCATTTTGGGTCAATGCTGTGAAATGCCAGTTGGGTATATCACCATTCCTGTTGGGATTGCTGGGCCTCTTATGCTTGATGGAAAAGAGTTCTCTGTCCCCATGGCCACAACTGAAGGTTGCTTGGTGGCTAGTACCAACCGTGGTTGCAAGGCTATTAACTTGTCTGGTGGAGCTACCAGTGTGCTATTGAAAGACGGAATGACCAGAGCACCTGTTGTCAGATTCAACTCTGCTAAAAGAGCTGCTGAATTGAAGTTTTTCATGGAAGACCCTGCCAATTACGAAACCATTTCCATGGTTTTCAACAAATCAAGCCGATTCGGTAGACTTCAGACAGTCAAGTGTGCCGTTGCTGGGAAAAACCTGTACATGAGATTCTGCTGCAGCACCGGCGATGCTATGGGGATGAACATGGTCTCCAAAGGTGTTCAAAATGTCCTTGACTTCCTTCAGAATGACTTCCCTGACATGGATGTCATTGGCATCTCTGGTAACTACTGCTCAGACAAGAAGCCTGCTGCTGTCAACTGGATCGAAGGCCGTGGCAAATCTGTGGTGTGTGAGGCTGTGATCAAGGGAGACATAGTAAGTAAGGTGTTGAAAACCAACGTGGCGGCCCTGGTGGAGCTTAACATGCTCAAGAACCTTACTGGTTCTGCCATGGCTGGTGCTCTTGGTGGGTTTAATGCGCATGCCAGTAACATTGTTTCAGCTGTCTACCTCGCAACTGGCCAAGACCCTGCTCAGAACATCGAGAGTTCTCACTGCATCACCATGATGGAAGCCATCAATGATGGAAAGGATCTTCACGTCTCAGTGACCATGCCTTCTATTGAGGTCGGCACTGTAGGAGGAGGTACCCAACTTGCGTCGCAGTCTGCTTGTTTGAACTTGCTTGGAGTGAAGGGAGCTAACAGAGAAGCACCAGGATCAAACGCAAGGCAGTTGGCCAGTGTTGTAGCTGGTTCTGTTCTTGCTGGAGAGCTATCTCTCATGTCTGCCATTGCAGCTGGACAGCTCGTCAAGAGTCACATGAAGTACAACCGATCGAACAAAGATGTTACAACTGTTGCTTCTTCAGAAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

582

Amino Acids

62.19

Weight (kDa)

5.93

Isoelectric Point (pI)

34.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	193 - 569	1.1e-145	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	53, 1133
Acc16I	TGCGCA	1 cut(s)	1350
Acc65I	GGTACC	1 cut(s)	1517
AccB1I	GGYRCC	1 cut(s)	1517
AccI	GTMKAC	4 cut(s)	45, 141, 985, 1377
AccII	CGCG	1 cut(s)	165
AciI	CCGC	3 cut(s)	321, 378, 1274
AclWI	GGATC	4 cut(s)	166, 1199, 1470, 1597
AcoI	YGGCCR	4 cut(s)	379, 762, 1390, 1608
AcuI	CTGAAG	4 cut(s)	792, 974, 1094, 1722
AcyI	GRCGYC	1 cut(s)	78
AdeI	CACNNNGTG	1 cut(s)	445
AfaI	GTAC	5 cut(s)	178, 793, 1028, 1519, 1700
AfiI	CCNNNNNNNGG	3 cut(s)	641, 1014, 1129
AgsI	TTSAA	8 cut(s)	399, 850, 886, 913, 964, 1091, 1261, 1549
AhdI	GACNNNNNGTC	2 cut(s)	82, 1679
AjiI	CACGTC	1 cut(s)	1471
AjnI	CCWGG	3 cut(s)	381, 1278, 1585
AjuI	GAANNNNNNNTTGG	2 cut(s)	672, 704
AloI	GAACNNNNNNTCC	2 cut(s)	1061, 1093
Alw21I	GWGCWC	3 cut(s)	9, 871, 1333
Alw26I	GTCTC	4 cut(s)	90, 1081, 1233, 1477
AlwI	GGATC	4 cut(s)	166, 1199, 1470, 1597
ApeKI	GCWGC	6 cut(s)	575, 902, 1041, 1044, 1178, 1667
Asp700I	GAANNNNTTC	2 cut(s)	917, 1118
Asp718I	GGTACC	1 cut(s)	1517
AspLEI	GCGC	2 cut(s)	165, 1351
AspS9I	GGNCC	4 cut(s)	318, 385, 722, 1276
AsuHPI	GGTGA	5 cut(s)	112, 417, 572, 691, 1423
BalI	TGGCCA	3 cut(s)	764, 1392, 1610
BanI	GGYRCC	1 cut(s)	1517
BbsI	GAAGAC	2 cut(s)	498, 933
Bbv12I	GWGCWC	3 cut(s)	9, 871, 1333
BbvCI	CCTCAGC	1 cut(s)	67
BbvI	GCAGC	6 cut(s)	587, 889, 1028, 1056, 1165, 1679
BccI	CCATC	5 cut(s)	230, 731, 1432, 1448, 1454
BceAI	ACGGC	3 cut(s)	497, 992, 1185
BciT130I	CCWGG	3 cut(s)	383, 1280, 1587
BclI	TGATCA	1 cut(s)	1230
BcoDI	GTCTC	4 cut(s)	90, 1081, 1233, 1477
BfaI	CTAG	2 cut(s)	156, 789
BfmI	CTRYAG	3 cut(s)	486, 1042, 1506
BisI	GCNGC	9 cut(s)	321, 379, 576, 903, 1042, 1045, 1179, 1275, 1668
BlsI	GCNGC	9 cut(s)	322, 380, 577, 904, 1043, 1046, 1180, 1276, 1669
Bme1390I	CCNGG	3 cut(s)	383, 1280, 1587
BmeRI	GACNNNNNGTC	2 cut(s)	82, 1679
BmgBI	CACGTC	1 cut(s)	1471
BmgT120I	GGNCC	4 cut(s)	318, 385, 722, 1276
BmiI	GGNNCC	3 cut(s)	372, 526, 1519
BmrFI	CCNGG	3 cut(s)	383, 1280, 1587
BmrI	ACTGGG	1 cut(s)	297
BmsI	GCATC	5 cut(s)	279, 349, 1045, 1152, 1437
BmuI	ACTGGG	1 cut(s)	297
BpiI	GAAGAC	2 cut(s)	498, 933
BpmI	CTGGAG	2 cut(s)	281, 1659
Bpu10I	CCTNAGC	1 cut(s)	67
BpuEI	CTTGAG	3 cut(s)	335, 566, 1283
Bsa29I	ATCGAT	1 cut(s)	273
BsaHI	GRCGYC	1 cut(s)	78
BsaI	GGTCTC	1 cut(s)	1081
BsaJI	CCNNGG	8 cut(s)	256, 513, 759, 799, 954, 1201, 1278, 1320
BsaXI	ACNNNNNCTCC	6 cut(s)	169, 199, 1061, 1091, 1230, 1260
Bsc4I	CCNNNNNNNGG	3 cut(s)	641, 1014, 1129
Bse118I	RCCGGY	1 cut(s)	1049
Bse1I	ACTGG	8 cut(s)	303, 686, 837, 1193, 1315, 1356, 1393, 1611
Bse3DI	GCAATG	1 cut(s)	1662
BseBI	CCWGG	3 cut(s)	383, 1280, 1587
BseCI	ATCGAT	1 cut(s)	273
BseDI	CCNNGG	8 cut(s)	256, 513, 759, 799, 954, 1201, 1278, 1320
BseGI	GGATG	4 cut(s)	222, 364, 1071, 1138
BseLI	CCNNNNNNNGG	3 cut(s)	641, 1014, 1129
BseMI	GCAATG	1 cut(s)	1662
BseMII	CTCAG	6 cut(s)	81, 87, 201, 1176, 1418, 1488
BseNI	ACTGG	8 cut(s)	303, 686, 837, 1193, 1315, 1356, 1393, 1611
BseRI	GAGGAG	3 cut(s)	177, 245, 1527
BseXI	GCAGC	6 cut(s)	587, 889, 1028, 1056, 1165, 1679
BseYI	CCCAGC	2 cut(s)	719, 1013
Bsh1236I	CGCG	1 cut(s)	165
Bsh1285I	CGRYCG	2 cut(s)	468, 1709
BshNI	GGYRCC	1 cut(s)	1517
BshVI	ATCGAT	1 cut(s)	273
BsiEI	CGRYCG	2 cut(s)	468, 1709
BsiHKAI	GWGCWC	3 cut(s)	9, 871, 1333
BsiSI	CCGG	2 cut(s)	522, 1050
BslFI	GGGAC	3 cut(s)	41, 271, 740
BslI	CCNNNNNNNGG	3 cut(s)	641, 1014, 1129
BsmAI	GTCTC	4 cut(s)	90, 1081, 1233, 1477
BsmBI	CGTCTC	1 cut(s)	1477
BsmFI	GGGAC	3 cut(s)	41, 271, 740
Bso31I	GGTCTC	1 cut(s)	1081
Bsp1286I	GDGCHC	3 cut(s)	9, 871, 1333
Bsp1407I	TGTACA	1 cut(s)	1026
Bsp143I	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
Bsp19I	CCATGG	3 cut(s)	759, 954, 1320
BspACI	CCGC	3 cut(s)	321, 378, 1274
BspCNI	CTCAG	6 cut(s)	80, 86, 202, 1175, 1417, 1487
BspDI	ATCGAT	1 cut(s)	273
BspFNI	CGCG	1 cut(s)	165
BspLI	GGNNCC	3 cut(s)	372, 526, 1519
BspMAI	CTGCAG	2 cut(s)	490, 1046
BspPI	GGATC	4 cut(s)	166, 1199, 1470, 1597
BspT107I	GGYRCC	1 cut(s)	1517
BspTNI	GGTCTC	1 cut(s)	1081
BsrDI	GCAATG	1 cut(s)	1662
BsrFI	RCCGGY	1 cut(s)	1049
BsrGI	TGTACA	1 cut(s)	1026
BsrI	ACTGG	8 cut(s)	303, 686, 837, 1193, 1315, 1356, 1393, 1611
BssAI	RCCGGY	1 cut(s)	1049
BssECI	CCNNGG	8 cut(s)	256, 513, 759, 799, 954, 1201, 1278, 1320
BssMI	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
BssNI	GRCGYC	1 cut(s)	78
BssT1I	CCWWGG	3 cut(s)	759, 954, 1320
Bst2UI	CCWGG	3 cut(s)	383, 1280, 1587
Bst4CI	ACNGT	4 cut(s)	800, 997, 1507, 1729
Bst6I	CTCTTC	4 cut(s)	131, 195, 333, 492
BstACI	GRCGYC	1 cut(s)	78
BstAUI	TGTACA	1 cut(s)	1026
BstC8I	GCNNGC	4 cut(s)	161, 462, 1176, 1353
BstDEI	CTNAG	6 cut(s)	67, 73, 210, 1162, 1404, 1474
BstDSI	CCRYGG	6 cut(s)	513, 759, 799, 954, 1201, 1320
BstF5I	GGATG	4 cut(s)	222, 364, 1071, 1138
BstFNI	CGCG	1 cut(s)	165
BstHHI	GCGC	2 cut(s)	165, 1351
BstKTI	GATC	9 cut(s)	52, 174, 205, 468, 1194, 1233, 1465, 1592, 1709
BstMAI	GTCTC	4 cut(s)	90, 1081, 1233, 1477
BstMBI	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
BstMCI	CGRYCG	2 cut(s)	468, 1709
BstNI	CCWGG	3 cut(s)	383, 1280, 1587
BstNSI	RCATGY	2 cut(s)	1297, 1355
BstSCI	CCNGG	3 cut(s)	381, 1278, 1585
BstSFI	CTRYAG	3 cut(s)	486, 1042, 1506
BstUI	CGCG	1 cut(s)	165
BstV1I	GCAGC	6 cut(s)	587, 889, 1028, 1056, 1165, 1679
BstV2I	GAAGAC	2 cut(s)	498, 933
BstX2I	RGATCY	2 cut(s)	171, 1462
BstXI	CCANNNNNNTGG	1 cut(s)	955
BstYI	RGATCY	2 cut(s)	171, 1462
Bsu15I	ATCGAT	1 cut(s)	273
BsuTUI	ATCGAT	1 cut(s)	273
BtgI	CCRYGG	6 cut(s)	513, 759, 799, 954, 1201, 1320
BtgZI	GCGATG	1 cut(s)	1068
BtrI	CACGTC	1 cut(s)	1471
BtsCI	GGATG	4 cut(s)	222, 364, 1071, 1138
BtsI	GCAGTG	1 cut(s)	1423
BtsIMutI	CAGTG	5 cut(s)	844, 1423, 1482, 1503, 1618
Cac8I	GCNNGC	4 cut(s)	161, 462, 1176, 1353
CfoI	GCGC	2 cut(s)	165, 1351
Cfr10I	RCCGGY	1 cut(s)	1049
Cfr13I	GGNCC	4 cut(s)	318, 385, 722, 1276
ClaI	ATCGAT	1 cut(s)	273
CseI	GACGC	2 cut(s)	86, 1518
Csp6I	GTAC	5 cut(s)	177, 792, 1027, 1518, 1699
CviQI	GTAC	5 cut(s)	177, 792, 1027, 1518, 1699
DdeI	CTNAG	6 cut(s)	67, 73, 210, 1162, 1404, 1474
DpnI	GATC	9 cut(s)	51, 173, 204, 467, 1193, 1232, 1464, 1591, 1708
DpnII	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
DraIII	CACNNNGTG	1 cut(s)	445
DrdI	GACNNNNNNGTC	2 cut(s)	53, 1133
DriI	GACNNNNNGTC	2 cut(s)	82, 1679
DseDI	GACNNNNNNGTC	2 cut(s)	53, 1133
EaeI	YGGCCR	4 cut(s)	379, 762, 1390, 1608
Eam1104I	CTCTTC	4 cut(s)	131, 195, 333, 492
Eam1105I	GACNNNNNGTC	2 cut(s)	82, 1679
EarI	CTCTTC	4 cut(s)	131, 195, 333, 492
Eco130I	CCWWGG	3 cut(s)	759, 954, 1320
Eco147I	AGGCCT	1 cut(s)	65
Eco31I	GGTCTC	1 cut(s)	1081
Eco57I	CTGAAG	4 cut(s)	792, 974, 1094, 1722
EcoO109I	RGGNCCY	1 cut(s)	385
EcoRII	CCWGG	3 cut(s)	381, 1278, 1585
EcoT14I	CCWWGG	3 cut(s)	759, 954, 1320
ErhI	CCWWGG	3 cut(s)	759, 954, 1320
Esp3I	CGTCTC	1 cut(s)	1477
FaqI	GGGAC	3 cut(s)	41, 271, 740
FbaI	TGATCA	1 cut(s)	1230
FblI	GTMKAC	4 cut(s)	45, 141, 985, 1377
Fnu4HI	GCNGC	9 cut(s)	321, 379, 576, 903, 1042, 1045, 1179, 1275, 1668
FokI	GGATG	4 cut(s)	209, 371, 1078, 1145
Fsp4HI	GCNGC	9 cut(s)	321, 379, 576, 903, 1042, 1045, 1179, 1275, 1668
FspAI	RTGCGCAY	1 cut(s)	1350
FspBI	CTAG	2 cut(s)	156, 789
FspI	TGCGCA	1 cut(s)	1350
GlaI	GCGC	2 cut(s)	164, 1350
GluI	GCNGC	9 cut(s)	321, 379, 576, 903, 1042, 1045, 1179, 1275, 1668
GsaI	CCCAGC	2 cut(s)	723, 1017
GsuI	CTGGAG	2 cut(s)	281, 1659
HapII	CCGG	2 cut(s)	522, 1050
HgaI	GACGC	2 cut(s)	86, 1518
HhaI	GCGC	2 cut(s)	165, 1351
Hin1I	GRCGYC	1 cut(s)	78
Hin6I	GCGC	2 cut(s)	163, 1349
HinP1I	GCGC	2 cut(s)	163, 1349
HincII	GTYRAC	2 cut(s)	46, 1186
HindII	GTYRAC	2 cut(s)	46, 1186
HinfI	GANTC	7 cut(s)	472, 548, 656, 882, 978, 1035, 1687
HpaII	CCGG	2 cut(s)	522, 1050
HphI	GGTGA	5 cut(s)	112, 417, 572, 691, 1423
Hpy166II	GTNNAC	5 cut(s)	46, 142, 986, 1186, 1378
Hpy188I	TCNGA	8 cut(s)	76, 211, 881, 993, 1113, 1165, 1407, 1741
Hpy188III	TCNNGA	4 cut(s)	469, 1300, 1414, 1684
Hpy8I	GTNNAC	5 cut(s)	46, 142, 986, 1186, 1378
Hpy99I	CGWCG	3 cut(s)	50, 329, 1534
HpyAV	CCTTC	7 cut(s)	253, 543, 767, 1118, 1190, 1497, 1558
HpyCH4III	ACNGT	4 cut(s)	800, 997, 1507, 1729
HpyCH4IV	ACGT	2 cut(s)	1269, 1470
HpyCH4V	TGCA	7 cut(s)	488, 567, 601, 807, 1044, 1428, 1667
HpyF3I	CTNAG	6 cut(s)	67, 73, 210, 1162, 1404, 1474
HpySE526I	ACGT	2 cut(s)	1269, 1470
Hsp92I	GRCGYC	1 cut(s)	78
HspAI	GCGC	2 cut(s)	163, 1349
KpnI	GGTACC	1 cut(s)	1521
Ksp22I	TGATCA	1 cut(s)	1230
Kzo9I	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
LmnI	GCTCC	5 cut(s)	4, 418, 830, 1285, 1568
Lsp1109I	GCAGC	6 cut(s)	587, 889, 1028, 1056, 1165, 1679
LweI	GCATC	5 cut(s)	279, 349, 1045, 1152, 1437
MaeI	CTAG	2 cut(s)	156, 789
MaeII	ACGT	2 cut(s)	1269, 1470
MaeIII	GTNAC	8 cut(s)	308, 433, 607, 1151, 1358, 1477, 1688, 1720
MalI	GATC	9 cut(s)	51, 173, 204, 467, 1193, 1232, 1464, 1591, 1708
MboI	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
MfeI	CAATTG	1 cut(s)	417
MflI	RGATCY	2 cut(s)	171, 1462
MhlI	GDGCHC	3 cut(s)	9, 871, 1333
MlsI	TGGCCA	3 cut(s)	764, 1392, 1610
MluCI	AATT	5 cut(s)	399, 408, 417, 908, 937
MluNI	TGGCCA	3 cut(s)	764, 1392, 1610
MlyI	GAGTC	3 cut(s)	557, 665, 1696
Mox20I	TGGCCA	3 cut(s)	764, 1392, 1610
MroXI	GAANNNNTTC	2 cut(s)	917, 1118
MscI	TGGCCA	3 cut(s)	764, 1392, 1610
MseI	TTAA	3 cut(s)	816, 1290, 1344
MslI	CAYNNNNRTG	4 cut(s)	26, 953, 1433, 1436
Msp20I	TGGCCA	3 cut(s)	764, 1392, 1610
MspA1I	CMGCKG	2 cut(s)	1373, 1670
MspI	CCGG	2 cut(s)	522, 1050
MspR9I	CCNGG	3 cut(s)	383, 1280, 1587
MunI	CAATTG	1 cut(s)	417
MvaI	CCWGG	3 cut(s)	383, 1280, 1587
MvnI	CGCG	1 cut(s)	165
NcoI	CCATGG	3 cut(s)	759, 954, 1320
NdeII	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
NlaIV	GGNNCC	3 cut(s)	372, 526, 1519
NmeAIII	GCCGAG	1 cut(s)	237
NmuCI	GTSAC	3 cut(s)	308, 1477, 1688
NsbI	TGCGCA	1 cut(s)	1350
NspI	RCATGY	2 cut(s)	1297, 1355
PaeI	GCATGC	1 cut(s)	1355
PceI	AGGCCT	1 cut(s)	65
PdmI	GAANNNNTTC	2 cut(s)	917, 1118
PfeI	GAWTC	4 cut(s)	472, 882, 978, 1035
PkrI	GCNGC	9 cut(s)	322, 380, 577, 904, 1043, 1046, 1180, 1276, 1669
Ple19I	CGATCG	2 cut(s)	468, 1709
PleI	GAGTC	3 cut(s)	556, 664, 1695
PpsI	GAGTC	3 cut(s)	556, 664, 1695
Psp6I	CCWGG	3 cut(s)	381, 1278, 1585
PspFI	CCCAGC	2 cut(s)	719, 1013
PspGI	CCWGG	3 cut(s)	381, 1278, 1585
PspN4I	GGNNCC	3 cut(s)	372, 526, 1519
PspPI	GGNCC	4 cut(s)	318, 385, 722, 1276
PstI	CTGCAG	2 cut(s)	490, 1046
PsuI	RGATCY	2 cut(s)	171, 1462
PvuI	CGATCG	2 cut(s)	468, 1709
PvuII	CAGCTG	2 cut(s)	1373, 1670
RsaI	GTAC	5 cut(s)	178, 793, 1028, 1519, 1700
RsaNI	GTAC	5 cut(s)	177, 792, 1027, 1518, 1699
RseI	CAYNNNNRTG	4 cut(s)	26, 953, 1433, 1436
SalI	GTCGAC	1 cut(s)	44
SaqAI	TTAA	3 cut(s)	816, 1290, 1344
SatI	GCNGC	9 cut(s)	321, 379, 576, 903, 1042, 1045, 1179, 1275, 1668
Sau3AI	GATC	9 cut(s)	49, 171, 202, 465, 1191, 1230, 1462, 1589, 1706
Sau96I	GGNCC	4 cut(s)	318, 385, 722, 1276
SchI	GAGTC	3 cut(s)	557, 665, 1696
ScrFI	CCNGG	3 cut(s)	383, 1280, 1587
SduI	GDGCHC	3 cut(s)	9, 871, 1333
SfaNI	GCATC	5 cut(s)	279, 349, 1045, 1152, 1437
SfcI	CTRYAG	3 cut(s)	486, 1042, 1506
SgrAI	CRCCGGYG	1 cut(s)	1049
SmiMI	CAYNNNNRTG	4 cut(s)	26, 953, 1433, 1436
SmlI	CTYRAG	3 cut(s)	350, 545, 1298
SmoI	CTYRAG	3 cut(s)	350, 545, 1298
SphI	GCATGC	1 cut(s)	1355
Sse9I	AATT	5 cut(s)	399, 408, 417, 908, 937
SseBI	AGGCCT	1 cut(s)	65
SsiI	CCGC	3 cut(s)	321, 378, 1274
SspMI	CTAG	2 cut(s)	156, 789
StuI	AGGCCT	1 cut(s)	65
StyD4I	CCNGG	3 cut(s)	381, 1278, 1585
StyI	CCWWGG	3 cut(s)	759, 954, 1320
TaaI	ACNGT	4 cut(s)	800, 997, 1507, 1729
TaiI	ACGT	2 cut(s)	1272, 1473
TaqI	TCGA	6 cut(s)	45, 273, 468, 1194, 1413, 1709
TasI	AATT	5 cut(s)	399, 408, 417, 908, 937
TatI	WGTACW	2 cut(s)	1026, 1698
TauI	GCSGC	3 cut(s)	323, 381, 1277
TfiI	GAWTC	4 cut(s)	472, 882, 978, 1035
Tru1I	TTAA	3 cut(s)	816, 1290, 1344
Tru9I	TTAA	3 cut(s)	816, 1290, 1344
TscAI	CASTG	5 cut(s)	844, 1430, 1482, 1510, 1618
TseFI	GTSAC	3 cut(s)	308, 1477, 1688
TseI	GCWGC	6 cut(s)	575, 902, 1041, 1044, 1178, 1667
Tsp45I	GTSAC	3 cut(s)	308, 1477, 1688
TspDTI	ATGAA	8 cut(s)	38, 44, 235, 468, 525, 910, 1082, 1709
TspGWI	ACGGA	4 cut(s)	24, 124, 164, 870
TspRI	CASTG	5 cut(s)	844, 1430, 1482, 1510, 1618
XceI	RCATGY	2 cut(s)	1297, 1355
XmiI	GTMKAC	4 cut(s)	45, 141, 985, 1377
XmnI	GAANNNNTTC	2 cut(s)	917, 1118
XspI	CTAG	2 cut(s)	156, 789

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.