Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Forward (+)

24602745 .. 24605054

Gene Structure 2310 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012980

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGGAGCACACTACCGGCAAGGGAGGCAACAAGCCCATGAAAACGAAAGTCAAGTTCGTCGACGATGAGGAAACCAAAGTCGTCAAGGCCTCCGACGCCTTGCCGCTGCCGCTCTACCTCACCAACGCCGTCTTCTTCACTCTCTTCTTCTCCGTCGCCTACTTCCTGCTCACCAGCTGGCGTGAGAAGATCCGTTCCAACACGCCTCTCCACATCCTCAATCTCTCTGAGCTCGTCTCCATACTGGTCTTGGTTGCGTCCTTCGTCTACCTCCTCGCCTTCTTCGGCATCGATTTCGTTCAGACCCCAGCTCTCAAGGACGAAGAAGAAGAAGATGACATTATTATTGTCCAGGAGGATGCTCGCGTGGTCCCTTGCGGCCAAGCCCTCGAGTGCCCGGTTCCCCAGATTGCCCCTAAAGTTGCACACAAGGTGTTTGATGAAAGGCCGGTGCCCGAGACCCCTCCTCTGACTGCAGAAGATGAGGAGATTATCAAGGCTGTCGTTGCCGGAACCATTCCTTCATATTCACTCGAGTCAAAGCTCGGAGATTGCAAGAGGGCTGCTTCTATTAGGCGGGAGGCTTTGCAGAGAGTTACAGGCAAGTCTCTTGAGGGTTTGCCATTGGAGGGTTTCGATTACGAGTCCATTTTGGGTCAATGCTGTGAAATGCCAGTTGGGTATGTCACCATTCCTGTTGGGATTGCTGGGCCTCTTATGCTTGATGGAAGAGAATTCTCAGTCCCCATGGCCACCACTGAAGGTTGCTTGGTGGCTAGTACCAACCGTGGTTGCAAAGCTATCAACTTGTCCGGTGGGGCTTCAAGTGTGCTTTTGAAGGATGGAATGACCAGAGCACCTGTTGTTAGATTCAACTCTGCTAAAAGGGCTGCTGAGTTGAAGTTCTTCATGGAAGATCCCGACAATTACGAAACAATCTCTATGGTTTTCAACAAATCAAGCAGATTTGGTAGACTTCAGACCGTCAATTGTGCAGTTGCTGGGAAGAACCTGTACATGAGATTCTGCTGCAGCACTGGTGATGCTATGGGGATGAACATGGTCTCTAAAGGTGTTCAAAACGTTCTCGATTTCCTCCAGAATGACTTCCCTGACATGGATGTCATTGGCATTTCTGGTAACTACTGCTCAGACAAAAAGCCTGCTGCTGTTAACTGGATTGAAGGCCGTGGCAAATCTGTGGTTTGCGAGGCTGTTATCAAGGGAGACGTAGTGACGAAGGTGTTGAAAACCAATGTGGCGGCCTTGGTGGAGCTTAACATGCTCAAGAACCTAACTGGTTCTGCAATTGCTGGTGCCCTTGGTGGTTTCAATGCACATGCCAGTAACATTGTTTCAGCAGTCTACCTAGCCACTGGTCAAGATCCAGCTCAGAACATCGAGAGTTCTCACTGTATCACCATGATGGAAGCCATCAATGGTGGCAAGGATCTTCACGTCTCAGTGACCATGCCTTCTATTGAGGTCGGCACAGTAGGAGGAGGTACCCAACTGGCATCGCAGTCGGCTTGCTTGAATTTGCTCGGAGTGAAGGGTGCCAACAGAGAGGCACCAGGATCAAATGCAAGGCAGTTAGCAAGTGTTGTAGCTGGTGCTGTTCTTGCTGGAGAGCTGTCTCTCATGTCTGCCATTGCTGCTGGACAACTCGTTAAGAGCCACATGAAATACAACAGATCTAGCAAAGATGTCACAGCTGTTGCTTCCGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

577

Amino Acids

61.42

Weight (kDa)

5.7

Isoelectric Point (pI)

34.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	189 - 565	4.5e-145	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1121
Acc65I	GGTACC	1 cut(s)	1505
AccB1I	GGYRCC	5 cut(s)	451, 1316, 1505, 1556, 1570
AccBSI	CCGCTC	1 cut(s)	112
AccI	GTMKAC	4 cut(s)	60, 267, 973, 1365
AccII	CGCG	1 cut(s)	366
AciI	CCGC	6 cut(s)	104, 110, 378, 577, 1262, 1725
AclI	AACGTT	1 cut(s)	1083
AclWI	GGATC	5 cut(s)	184, 911, 1379, 1458, 1585
AcoI	YGGCCR	2 cut(s)	379, 750
AcsI	RAATTY	2 cut(s)	734, 1537
AcuI	CTGAAG	2 cut(s)	780, 962
AcyI	GRCGYC	1 cut(s)	96
AdeI	CACNNNGTG	1 cut(s)	433
AfaI	GTAC	3 cut(s)	781, 1016, 1507
AfiI	CCNNNNNNNGG	2 cut(s)	629, 1117
AjiI	CACGTC	1 cut(s)	1459
AjnI	CCWGG	2 cut(s)	351, 1573
AjuI	GAANNNNNNNTTGG	4 cut(s)	116, 148, 660, 692
Alw21I	GWGCWC	3 cut(s)	9, 234, 859
Alw26I	GTCTC	7 cut(s)	241, 452, 612, 1069, 1221, 1465, 1641
AlwI	GGATC	5 cut(s)	184, 911, 1379, 1458, 1585
AlwNI	CAGNNNCTG	1 cut(s)	1001
Ama87I	CYCGRG	3 cut(s)	389, 455, 533
AoxI	GGCC	7 cut(s)	87, 379, 446, 710, 750, 1186, 1263
ApeKI	GCWGC	7 cut(s)	106, 563, 890, 1029, 1032, 1166, 1655
ApoI	RAATTY	2 cut(s)	734, 1537
Asp700I	GAANNNNTTC	2 cut(s)	905, 1106
Asp718I	GGTACC	1 cut(s)	1505
AspS9I	GGNCC	2 cut(s)	370, 710
AsuC2I	CCSGG	1 cut(s)	398
AsuHPI	GGTGA	5 cut(s)	112, 163, 679, 1052, 1411
AvaI	CYCGRG	3 cut(s)	389, 455, 533
AvaII	GGWCC	1 cut(s)	370
BaeGI	GKGCMC	3 cut(s)	398, 456, 1321
BalI	TGGCCA	1 cut(s)	752
BanI	GGYRCC	5 cut(s)	451, 1316, 1505, 1556, 1570
BanII	GRGCYC	1 cut(s)	234
BarI	GAAGNNNNNNTAC	2 cut(s)	998, 1030
BbsI	GAAGAC	1 cut(s)	124
Bbv12I	GWGCWC	3 cut(s)	9, 234, 859
BbvI	GCAGC	7 cut(s)	93, 550, 877, 1016, 1044, 1153, 1642
BccI	CCATC	4 cut(s)	719, 836, 1420, 1442
BceAI	ACGGC	2 cut(s)	113, 1173
BcgI	CGANNNNNNTGC	4 cut(s)	277, 311, 1506, 1540
BciT130I	CCWGG	2 cut(s)	353, 1575
BcnI	CCSGG	1 cut(s)	398
BcoDI	GTCTC	7 cut(s)	241, 452, 612, 1069, 1221, 1465, 1641
BfaI	CTAG	3 cut(s)	777, 1370, 1698
BfmI	CTRYAG	2 cut(s)	474, 1030
BglII	AGATCT	1 cut(s)	1694
Bme1390I	CCNGG	3 cut(s)	353, 398, 1575
Bme18I	GGWCC	1 cut(s)	370
BmeT110I	CYCGRG	3 cut(s)	389, 455, 533
BmgBI	CACGTC	1 cut(s)	1459
BmgT120I	GGNCC	2 cut(s)	370, 710
BmiI	GGNNCC	8 cut(s)	372, 402, 453, 514, 1318, 1507, 1558, 1572
BmrFI	CCNGG	3 cut(s)	353, 398, 1575
BmsI	GCATC	4 cut(s)	297, 349, 1033, 1526
BpiI	GAAGAC	1 cut(s)	124
BplI	GAGNNNNNCTC	2 cut(s)	221, 253
BpmI	CTGGAG	2 cut(s)	1082, 1647
BpuEI	CTTGAG	3 cut(s)	299, 632, 1271
BpuMI	CCSGG	1 cut(s)	398
Bsa29I	ATCGAT	1 cut(s)	291
BsaHI	GRCGYC	1 cut(s)	96
BsaI	GGTCTC	2 cut(s)	452, 1069
BsaJI	CCNNGG	5 cut(s)	747, 787, 1189, 1266, 1321
BsaWI	WCCGGW	1 cut(s)	812
BsaXI	ACNNNNNCTCC	2 cut(s)	1218, 1248
Bsc4I	CCNNNNNNNGG	2 cut(s)	629, 1117
Bse118I	RCCGGY	2 cut(s)	14, 448
Bse1I	ACTGG	8 cut(s)	249, 674, 1042, 1181, 1303, 1344, 1381, 1518
Bse3DI	GCAATG	1 cut(s)	1650
BseBI	CCWGG	2 cut(s)	353, 1575
BseCI	ATCGAT	1 cut(s)	291
BseDI	CCNNGG	5 cut(s)	747, 787, 1189, 1266, 1321
BseGI	GGATG	5 cut(s)	213, 364, 847, 1059, 1126
BseLI	CCNNNNNNNGG	2 cut(s)	629, 1117
BseMI	GCAATG	1 cut(s)	1650
BseMII	CTCAG	6 cut(s)	219, 753, 885, 1164, 1406, 1476
BseNI	ACTGG	8 cut(s)	249, 674, 1042, 1181, 1303, 1344, 1381, 1518
BseRI	GAGGAG	4 cut(s)	263, 456, 500, 1515
BseSI	GKGCMC	3 cut(s)	398, 456, 1321
BseXI	GCAGC	7 cut(s)	93, 550, 877, 1016, 1044, 1153, 1642
BseYI	CCCAGC	3 cut(s)	307, 707, 1001
BsgI	GTGCAG	1 cut(s)	1014
Bsh1236I	CGCG	1 cut(s)	366
BshFI	GGCC	7 cut(s)	89, 381, 448, 712, 752, 1188, 1265
BshNI	GGYRCC	5 cut(s)	451, 1316, 1505, 1556, 1570
BshVI	ATCGAT	1 cut(s)	291
BsiHKAI	GWGCWC	3 cut(s)	9, 234, 859
BsiHKCI	CYCGRG	3 cut(s)	389, 455, 533
BsiSI	CCGG	5 cut(s)	15, 398, 449, 510, 813
BslFI	GGGAC	2 cut(s)	356, 728
BslI	CCNNNNNNNGG	2 cut(s)	629, 1117
BsmAI	GTCTC	7 cut(s)	241, 452, 612, 1069, 1221, 1465, 1641
BsmBI	CGTCTC	3 cut(s)	241, 1221, 1465
BsmFI	GGGAC	2 cut(s)	356, 728
BsnI	GGCC	7 cut(s)	89, 381, 448, 712, 752, 1188, 1265
Bso31I	GGTCTC	2 cut(s)	452, 1069
BsoBI	CYCGRG	3 cut(s)	389, 455, 533
Bsp1286I	GDGCHC	6 cut(s)	9, 234, 398, 456, 859, 1321
Bsp1407I	TGTACA	1 cut(s)	1014
Bsp143I	GATC	6 cut(s)	189, 916, 1384, 1450, 1577, 1694
Bsp19I	CCATGG	1 cut(s)	747
BspACI	CCGC	6 cut(s)	104, 110, 378, 577, 1262, 1725
BspANI	GGCC	7 cut(s)	89, 381, 448, 712, 752, 1188, 1265
BspCNI	CTCAG	6 cut(s)	220, 752, 886, 1163, 1405, 1475
BspDI	ATCGAT	1 cut(s)	291
BspFNI	CGCG	1 cut(s)	366
BspLI	GGNNCC	8 cut(s)	372, 402, 453, 514, 1318, 1507, 1558, 1572
BspMAI	CTGCAG	2 cut(s)	478, 1034
BspPI	GGATC	5 cut(s)	184, 911, 1379, 1458, 1585
BspT107I	GGYRCC	5 cut(s)	451, 1316, 1505, 1556, 1570
BspTNI	GGTCTC	2 cut(s)	452, 1069
BsrBI	CCGCTC	1 cut(s)	112
BsrDI	GCAATG	1 cut(s)	1650
BsrFI	RCCGGY	2 cut(s)	14, 448
BsrGI	TGTACA	1 cut(s)	1014
BsrI	ACTGG	8 cut(s)	249, 674, 1042, 1181, 1303, 1344, 1381, 1518
BssAI	RCCGGY	2 cut(s)	14, 448
BssECI	CCNNGG	5 cut(s)	747, 787, 1189, 1266, 1321
BssMI	GATC	6 cut(s)	189, 916, 1384, 1450, 1577, 1694
BssNI	GRCGYC	1 cut(s)	96
BssT1I	CCWWGG	3 cut(s)	747, 1266, 1321
Bst2UI	CCWGG	2 cut(s)	353, 1575
Bst4CI	ACNGT	4 cut(s)	788, 985, 1415, 1495
Bst6I	CTCTTC	2 cut(s)	149, 724
BstACI	GRCGYC	1 cut(s)	96
BstAUI	TGTACA	1 cut(s)	1014
BstC8I	GCNNGC	4 cut(s)	179, 364, 1164, 1531
BstDEI	CTNAG	6 cut(s)	228, 739, 894, 1150, 1392, 1462
BstDSI	CCRYGG	3 cut(s)	747, 787, 1189
BstF5I	GGATG	5 cut(s)	213, 364, 847, 1059, 1126
BstFNI	CGCG	1 cut(s)	366
BstKTI	GATC	6 cut(s)	192, 919, 1387, 1453, 1580, 1697
BstMAI	GTCTC	7 cut(s)	241, 452, 612, 1069, 1221, 1465, 1641
BstMBI	GATC	6 cut(s)	189, 916, 1384, 1450, 1577, 1694
BstMWI	GCNNNNNNNGC	9 cut(s)	24, 95, 109, 506, 718, 887, 1282, 1622, 1655
BstNI	CCWGG	2 cut(s)	353, 1575
BstNSI	RCATGY	2 cut(s)	1285, 1343
BstSCI	CCNGG	3 cut(s)	351, 396, 1573
BstSFI	CTRYAG	2 cut(s)	474, 1030
BstSLI	GKGCMC	3 cut(s)	398, 456, 1321
BstUI	CGCG	1 cut(s)	366
BstV1I	GCAGC	7 cut(s)	93, 550, 877, 1016, 1044, 1153, 1642
BstV2I	GAAGAC	1 cut(s)	124
BstX2I	RGATCY	5 cut(s)	189, 916, 1384, 1450, 1694
BstYI	RGATCY	5 cut(s)	189, 916, 1384, 1450, 1694
Bsu15I	ATCGAT	1 cut(s)	291
BsuRI	GGCC	7 cut(s)	89, 381, 448, 712, 752, 1188, 1265
BsuTUI	ATCGAT	1 cut(s)	291
BtgI	CCRYGG	3 cut(s)	747, 787, 1189
BtgZI	GCGATG	1 cut(s)	1503
BtrI	CACGTC	1 cut(s)	1459
BtsCI	GGATG	5 cut(s)	213, 364, 847, 1059, 1126
BtsIMutI	CAGTG	5 cut(s)	756, 1035, 1374, 1411, 1470
Cac8I	GCNNGC	4 cut(s)	179, 364, 1164, 1531
CaiI	CAGNNNCTG	1 cut(s)	1001
Cfr10I	RCCGGY	2 cut(s)	14, 448
Cfr13I	GGNCC	2 cut(s)	370, 710
ClaI	ATCGAT	1 cut(s)	291
CseI	GACGC	2 cut(s)	104, 246
Csp6I	GTAC	3 cut(s)	780, 1015, 1506
CviQI	GTAC	3 cut(s)	780, 1015, 1506
DdeI	CTNAG	6 cut(s)	228, 739, 894, 1150, 1392, 1462
DpnI	GATC	6 cut(s)	191, 918, 1386, 1452, 1579, 1696
DpnII	GATC	6 cut(s)	189, 916, 1384, 1450, 1577, 1694
DraIII	CACNNNGTG	1 cut(s)	433
DrdI	GACNNNNNNGTC	1 cut(s)	1121
DseDI	GACNNNNNNGTC	1 cut(s)	1121
EaeI	YGGCCR	2 cut(s)	379, 750
Eam1104I	CTCTTC	2 cut(s)	149, 724
EarI	CTCTTC	2 cut(s)	149, 724
Ecl136II	GAGCTC	1 cut(s)	232
Eco130I	CCWWGG	3 cut(s)	747, 1266, 1321
Eco147I	AGGCCT	1 cut(s)	89
Eco24I	GRGCYC	1 cut(s)	234
Eco31I	GGTCTC	2 cut(s)	452, 1069
Eco47I	GGWCC	1 cut(s)	370
Eco53kI	GAGCTC	1 cut(s)	232
Eco57I	CTGAAG	2 cut(s)	780, 962
Eco88I	CYCGRG	3 cut(s)	389, 455, 533
EcoICRI	GAGCTC	1 cut(s)	232
EcoRI	GAATTC	1 cut(s)	734
EcoRII	CCWGG	2 cut(s)	351, 1573
EcoT14I	CCWWGG	3 cut(s)	747, 1266, 1321
EcoT38I	GRGCYC	1 cut(s)	234
ErhI	CCWWGG	3 cut(s)	747, 1266, 1321
Esp3I	CGTCTC	3 cut(s)	241, 1221, 1465
FaqI	GGGAC	2 cut(s)	356, 728
FauI	CCCGC	1 cut(s)	570
FblI	GTMKAC	4 cut(s)	60, 267, 973, 1365
FokI	GGATG	5 cut(s)	200, 371, 854, 1066, 1133
FriOI	GRGCYC	1 cut(s)	234
FspBI	CTAG	3 cut(s)	777, 1370, 1698
GsaI	CCCAGC	3 cut(s)	311, 711, 1005
GsuI	CTGGAG	2 cut(s)	1082, 1647
HaeIII	GGCC	7 cut(s)	89, 381, 448, 712, 752, 1188, 1265
HapII	CCGG	5 cut(s)	15, 398, 449, 510, 813
HgaI	GACGC	2 cut(s)	104, 246
Hin1I	GRCGYC	1 cut(s)	96
HincII	GTYRAC	2 cut(s)	61, 1174
HindII	GTYRAC	2 cut(s)	61, 1174
HinfI	GANTC	4 cut(s)	536, 644, 870, 1023
HpaI	GTTAAC	1 cut(s)	1174
HpaII	CCGG	5 cut(s)	15, 398, 449, 510, 813
HphI	GGTGA	5 cut(s)	112, 163, 679, 1052, 1411
Hpy166II	GTNNAC	5 cut(s)	61, 268, 974, 1174, 1366
Hpy188I	TCNGA	9 cut(s)	94, 229, 303, 471, 548, 981, 1153, 1395, 1547
Hpy188III	TCNNGA	7 cut(s)	611, 920, 1088, 1099, 1288, 1382, 1402
Hpy8I	GTNNAC	5 cut(s)	61, 268, 974, 1174, 1366
Hpy99I	CGWCG	4 cut(s)	62, 65, 98, 158
HpyAV	CCTTC	9 cut(s)	271, 289, 531, 755, 832, 1178, 1234, 1485, 1546
HpyCH4III	ACNGT	4 cut(s)	788, 985, 1415, 1495
HpyCH4IV	ACGT	3 cut(s)	1083, 1230, 1458
HpyF10VI	GCNNNNNNNGC	9 cut(s)	24, 95, 109, 506, 718, 887, 1282, 1622, 1655
HpyF3I	CTNAG	6 cut(s)	228, 739, 894, 1150, 1392, 1462
HpySE526I	ACGT	3 cut(s)	1083, 1230, 1458
Hsp92I	GRCGYC	1 cut(s)	96
KpnI	GGTACC	1 cut(s)	1509
KspAI	GTTAAC	1 cut(s)	1174
Kzo9I	GATC	6 cut(s)	189, 916, 1384, 1450, 1577, 1694
LmnI	GCTCC	2 cut(s)	4, 1273
Lsp1109I	GCAGC	7 cut(s)	93, 550, 877, 1016, 1044, 1153, 1642
LweI	GCATC	4 cut(s)	297, 349, 1033, 1526
MaeI	CTAG	3 cut(s)	777, 1370, 1698
MaeII	ACGT	3 cut(s)	1083, 1230, 1458
MaeIII	GTNAC	7 cut(s)	595, 685, 1139, 1234, 1346, 1465, 1708
MalI	GATC	6 cut(s)	191, 918, 1386, 1452, 1579, 1696
MbiI	CCGCTC	1 cut(s)	112
MboI	GATC	6 cut(s)	189, 916, 1384, 1450, 1577, 1694
MfeI	CAATTG	2 cut(s)	988, 1308
MflI	RGATCY	5 cut(s)	189, 916, 1384, 1450, 1694
MhlI	GDGCHC	6 cut(s)	9, 234, 398, 456, 859, 1321
MlsI	TGGCCA	1 cut(s)	752
MluCI	AATT	5 cut(s)	734, 925, 988, 1308, 1537
MluNI	TGGCCA	1 cut(s)	752
MlyI	GAGTC	2 cut(s)	545, 653
MmeI	TCCRAC	2 cut(s)	117, 222
Mox20I	TGGCCA	1 cut(s)	752
MroXI	GAANNNNTTC	2 cut(s)	905, 1106
MscI	TGGCCA	1 cut(s)	752
MseI	TTAA	3 cut(s)	1173, 1278, 1671
MslI	CAYNNNNRTG	1 cut(s)	1424
Msp20I	TGGCCA	1 cut(s)	752
MspA1I	CMGCKG	3 cut(s)	106, 177, 1715
MspI	CCGG	5 cut(s)	15, 398, 449, 510, 813
MspR9I	CCNGG	3 cut(s)	353, 398, 1575
MunI	CAATTG	2 cut(s)	988, 1308
MvaI	CCWGG	2 cut(s)	353, 1575
MvnI	CGCG	1 cut(s)	366
MwoI	GCNNNNNNNGC	9 cut(s)	24, 95, 109, 506, 718, 887, 1282, 1622, 1655
NciI	CCSGG	1 cut(s)	398
NcoI	CCATGG	1 cut(s)	747
NdeII	GATC	6 cut(s)	189, 916, 1384, 1450, 1577, 1694
NlaIV	GGNNCC	8 cut(s)	372, 402, 453, 514, 1318, 1507, 1558, 1572
NmuCI	GTSAC	4 cut(s)	685, 1234, 1465, 1708
NspI	RCATGY	2 cut(s)	1285, 1343
PaeR7I	CTCGAG	2 cut(s)	389, 533
PceI	AGGCCT	1 cut(s)	89
PdmI	GAANNNNTTC	2 cut(s)	905, 1106
PfeI	GAWTC	2 cut(s)	870, 1023
PfoI	TCCNGGA	1 cut(s)	351
PleI	GAGTC	2 cut(s)	544, 652
PpsI	GAGTC	2 cut(s)	544, 652
Psp124BI	GAGCTC	1 cut(s)	234
Psp1406I	AACGTT	1 cut(s)	1083
Psp6I	CCWGG	2 cut(s)	351, 1573
PspFI	CCCAGC	3 cut(s)	307, 707, 1001
PspGI	CCWGG	2 cut(s)	351, 1573
PspN4I	GGNNCC	8 cut(s)	372, 402, 453, 514, 1318, 1507, 1558, 1572
PspPI	GGNCC	2 cut(s)	370, 710
PspXI	VCTCGAGB	2 cut(s)	389, 533
PstI	CTGCAG	2 cut(s)	478, 1034
PstNI	CAGNNNCTG	1 cut(s)	1001
PsuI	RGATCY	5 cut(s)	189, 916, 1384, 1450, 1694
PvuII	CAGCTG	2 cut(s)	177, 1715
RsaI	GTAC	3 cut(s)	781, 1016, 1507
RsaNI	GTAC	3 cut(s)	780, 1015, 1506
RseI	CAYNNNNRTG	1 cut(s)	1424
SacI	GAGCTC	1 cut(s)	234
SalI	GTCGAC	1 cut(s)	59
SaqAI	TTAA	3 cut(s)	1173, 1278, 1671
Sau3AI	GATC	6 cut(s)	189, 916, 1384, 1450, 1577, 1694
Sau96I	GGNCC	2 cut(s)	370, 710
SchI	GAGTC	2 cut(s)	545, 653
ScrFI	CCNGG	3 cut(s)	353, 398, 1575
SduI	GDGCHC	6 cut(s)	9, 234, 398, 456, 859, 1321
SfaNI	GCATC	4 cut(s)	297, 349, 1033, 1526
SfcI	CTRYAG	2 cut(s)	474, 1030
Sfr274I	CTCGAG	2 cut(s)	389, 533
SgrDI	CGTCGACG	1 cut(s)	59
SinI	GGWCC	1 cut(s)	370
SlaI	CTCGAG	2 cut(s)	389, 533
SmiMI	CAYNNNNRTG	1 cut(s)	1424
SmlI	CTYRAG	5 cut(s)	314, 389, 533, 611, 1286
SmoI	CTYRAG	5 cut(s)	314, 389, 533, 611, 1286
Sse9I	AATT	5 cut(s)	734, 925, 988, 1308, 1537
SseBI	AGGCCT	1 cut(s)	89
SsiI	CCGC	6 cut(s)	104, 110, 378, 577, 1262, 1725
SspMI	CTAG	3 cut(s)	777, 1370, 1698
SstI	GAGCTC	1 cut(s)	234
StuI	AGGCCT	1 cut(s)	89
StyD4I	CCNGG	3 cut(s)	351, 396, 1573
StyI	CCWWGG	3 cut(s)	747, 1266, 1321
TaaI	ACNGT	4 cut(s)	788, 985, 1415, 1495
TaiI	ACGT	3 cut(s)	1086, 1233, 1461
TaqI	TCGA	7 cut(s)	60, 291, 390, 534, 636, 1089, 1401
TasI	AATT	5 cut(s)	734, 925, 988, 1308, 1537
TatI	WGTACW	1 cut(s)	1014
TauI	GCSGC	4 cut(s)	106, 112, 381, 1265
TfiI	GAWTC	2 cut(s)	870, 1023
Tru1I	TTAA	3 cut(s)	1173, 1278, 1671
Tru9I	TTAA	3 cut(s)	1173, 1278, 1671
TscAI	CASTG	5 cut(s)	763, 1042, 1381, 1418, 1470
TseFI	GTSAC	4 cut(s)	685, 1234, 1465, 1708
TseI	GCWGC	7 cut(s)	106, 563, 890, 1029, 1032, 1166, 1655
Tsp45I	GTSAC	4 cut(s)	685, 1234, 1465, 1708
TspDTI	ATGAA	6 cut(s)	53, 456, 513, 898, 1070, 1697
TspGWI	ACGGA	2 cut(s)	142, 182
TspRI	CASTG	5 cut(s)	763, 1042, 1381, 1418, 1470
VpaK11BI	GGWCC	1 cut(s)	370
XapI	RAATTY	2 cut(s)	734, 1537
XceI	RCATGY	2 cut(s)	1285, 1343
XcmI	CCANNNNNNNNNTGG	1 cut(s)	247
XhoI	CTCGAG	2 cut(s)	389, 533
XmiI	GTMKAC	4 cut(s)	60, 267, 973, 1365
XmnI	GAANNNNTTC	2 cut(s)	905, 1106
XspI	CTAG	3 cut(s)	777, 1370, 1698

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.