Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001710.1

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Forward (+)

69643 .. 71811

Gene Structure 2169 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001710.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ctgtttacccctctcactcctccgcacgtgtgggcgtctctcactcacacgcttccagagctccacacgaaaccaactctatatatacttcccctaaacactcgctcctccattcagagtttcaaactcgcaaccaactcacagcgacaacgcggaaaaatcaaagcctttctccgagtccctaaaccccaacaacaacaacaactccggcttcctccctcctcctcctccggtcgccggtggcgtgcagcagccatctccttcaccgagtttatacgatggacgtccgaaggcgatcgaactccggcttcctccctcctcctcctcctccggtcgccggtggcgtgcagcagccatctccttcaccgagtttatacgatggacgtccgaaggcgatcggcgatggagcagcccactaggggagcgggcggcaggccggtgaaaatgaaagtgaagatggtcgatcaaaacgacgccgttaaggcctccgacgcgttgccgctgcctatgtacctgacaaatgcggtcttcttcactctcttcttctccgtcgtctacttcctgctcactcgctggcgcgagaagatccgcacctccactcccctccacatggtcaatctgtctgagattgtagccatccttgccttcgtagcctccttcatctacctcctcggcttcttcggcatcgatttcgtccagtccttgattctccggcccagtcaagacgtttgggccgccgaggatgacgaggaggacattattctcaaggaggatgcccgcaaagtgccgtgtggccaggcccttgattgttcaattcccaaaattgctccaatggctccactgaaacctgctcttaaagttgcacagaaggtgtttgataaagaggtggtgagcgagaccacgccgccgactgcagaagacgaagagatcatcaacgctgtggtggctggaaccattccctcgtactcactcgagacaaagctcggcgattgcaagagggcagcttctgtcaggcgtgaggctttgcagagagttacaggcaagtctcttgagggtttgccattggacggattcgattacgagtcaattttgggtcaatgctgtgagatgccagtcggatatgtcaccatccctgttggaattgctggccctattatgctcgatggaagagagttctcaatccccatggccacaactgaaggttgcttggtggccagtaccaaccgcggttgcaaagccatcaacctgtccggtggagctgccagtgtgctgttgaaagatggaatgaccagagcacctgttgtcagattcaactcggctaagagagctgctgagttgaagttcttcatggaagaccctgagaatgccgacaccatagccacccttttcaacaaatcaagcagatttggtagacttcaatcagttaattgtgccgttgctgggaagaacctgtacatgaggttctgctgcagcaccggtgatgctatggggatgaacatggtgtctaaaggtgttcaaaacgttctcgatttcctacagagtgacttccctgacatggatgtcattggcatttctggtaactactgctcagacaagaagcctgctgctgtcaactggatcgaaggccgtggcaagtctgtggtctgtgaggctgtgatcaagggagacatagtgacgaaggttttgaaaaccaaggtggcggctttggtggagctcaacatgctcaagaaccttactggttccgctattgctggtgctcttggtggtttcaatgcacatgccagtaacattgtttcggctgtgtaccttgccactggtcaagaccctgctcagaacattgagagttctcactgtatcaccatgatggaagccatcaatgatggcaaggatcttcacgtctctgtcaccatgccgtccattgaggttggtaccgtaggaggagggacccaacttgcatcccagtcagcatgtttgaacttgcttggagtgaagggtgctaacagagaggcaccaggagcgaacgcaaggcaattggccagtgttgtagctgcgtcggttcttgccggagagctttctcttatgtctgctatcgctgctggtcagctcgttaagagccacatgaagtacaaccgatccagcaaagatgtctcaacaatggtttctgcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

722

Amino Acids

77.97

Weight (kDa)

8.99

Isoelectric Point (pI)

43.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1559
AatII	GACGTC	2 cut(s)	287, 387
Acc36I	ACCTGC	1 cut(s)	856
Acc65I	GGTACC	1 cut(s)	1928
AccB1I	GGYRCC	2 cut(s)	1928, 2008
AccBSI	CCGCTC	1 cut(s)	425
AccI	GTMKAC	2 cut(s)	555, 1411
AccII	CGCG	4 cut(s)	153, 494, 579, 1227
AclI	AACGTT	1 cut(s)	1521
AclWI	GGATC	4 cut(s)	580, 1625, 1896, 2127
AcoI	YGGCCR	4 cut(s)	793, 1188, 1212, 2034
AcuI	CTGAAG	1 cut(s)	1218
AcvI	CACGTG	1 cut(s)	28
AcyI	GRCGYC	4 cut(s)	35, 284, 384, 474
AfaI	GTAC	7 cut(s)	512, 965, 1219, 1454, 1805, 1930, 2126
AfiI	CCNNNNNNNGG	7 cut(s)	237, 337, 419, 610, 1067, 1440, 1555
AflIII	ACRYGT	2 cut(s)	27, 492
AgeI	ACCGGT	1 cut(s)	1475
AjiI	CACGTC	1 cut(s)	1897
AjnI	CCWGG	2 cut(s)	795, 2011
AluBI	AGCT	9 cut(s)	61, 982, 1004, 1259, 1328, 1714, 2048, 2071, 2104
AluI	AGCT	9 cut(s)	61, 982, 1004, 1259, 1328, 1714, 2048, 2071, 2104
Alw21I	GWGCWC	4 cut(s)	63, 1297, 1716, 1759
Alw26I	GTCTC	7 cut(s)	42, 890, 968, 1050, 1659, 1903, 2152
AlwI	GGATC	4 cut(s)	580, 1625, 1896, 2127
AlwNI	CAGNNNCTG	1 cut(s)	1007
Ama87I	CYCGRG	1 cut(s)	971
ArsI	GACNNNNNNTTYG	2 cut(s)	1666, 1698
AsiGI	ACCGGT	1 cut(s)	1475
Asp700I	GAANNNNTTC	1 cut(s)	1343
Asp718I	GGTACC	1 cut(s)	1928
AspLEI	GCGC	1 cut(s)	579
AspS9I	GGNCC	5 cut(s)	714, 732, 799, 1148, 1944
AsuHPI	GGTGA	8 cut(s)	256, 356, 451, 901, 1117, 1490, 1849, 1897
AvaI	CYCGRG	1 cut(s)	971
AvaII	GGWCC	1 cut(s)	1944
BalI	TGGCCA	4 cut(s)	795, 1190, 1214, 2036
BanI	GGYRCC	2 cut(s)	1928, 2008
BanII	GRGCYC	2 cut(s)	63, 1716
BarI	GAAGNNNNNNTAC	2 cut(s)	1436, 1468
BbrPI	CACGTG	1 cut(s)	28
BbsI	GAAGAC	3 cut(s)	520, 924, 1359
Bbv12I	GWGCWC	4 cut(s)	63, 1297, 1716, 1759
BceAI	ACGGC	5 cut(s)	461, 772, 1418, 1611, 1897
BcgI	CGANNNNNNTGC	2 cut(s)	673, 707
BciT130I	CCWGG	2 cut(s)	797, 2013
BclI	TGATCA	1 cut(s)	1656
BcoDI	GTCTC	7 cut(s)	42, 890, 968, 1050, 1659, 1903, 2152
BfaI	CTAG	1 cut(s)	417
BfmI	CTRYAG	3 cut(s)	912, 1468, 1535
BfuAI	ACCTGC	1 cut(s)	856
BglI	GCCNNNNNGGC	1 cut(s)	482
Bme1390I	CCNGG	2 cut(s)	797, 2013
Bme18I	GGWCC	1 cut(s)	1944
BmeT110I	CYCGRG	1 cut(s)	971
BmgBI	CACGTC	1 cut(s)	1897
BmgT120I	GGNCC	5 cut(s)	714, 732, 799, 1148, 1944
BmiI	GGNNCC	7 cut(s)	837, 952, 1741, 1930, 1945, 1946, 2010
BmrFI	CCNGG	2 cut(s)	797, 2013
BmrI	ACTGGG	2 cut(s)	711, 1954
BmsI	GCATC	5 cut(s)	693, 763, 1098, 1471, 1964
BmuI	ACTGGG	2 cut(s)	711, 1954
BpiI	GAAGAC	3 cut(s)	520, 924, 1359
BpuEI	CTTGAG	3 cut(s)	749, 1070, 1709
Bsa29I	ATCGAT	1 cut(s)	687
BsaAI	YACGTR	1 cut(s)	28
BsaHI	GRCGYC	4 cut(s)	35, 284, 384, 474
BsaI	GGTCTC	1 cut(s)	890
BsaJI	CCNNGG	6 cut(s)	670, 738, 1185, 1225, 1627, 1692
BsaWI	WCCGGW	4 cut(s)	230, 330, 1250, 1475
BsaXI	ACNNNNNCTCC	8 cut(s)	89, 119, 189, 219, 583, 613, 1656, 1686
Bsc4I	CCNNNNNNNGG	7 cut(s)	237, 337, 419, 610, 1067, 1440, 1555
Bse118I	RCCGGY	4 cut(s)	237, 337, 436, 1475
BseBI	CCWGG	2 cut(s)	797, 2013
BseCI	ATCGAT	1 cut(s)	687
BseDI	CCNNGG	6 cut(s)	670, 738, 1185, 1225, 1627, 1692
BseGI	GGATG	7 cut(s)	636, 748, 778, 1128, 1497, 1564, 1955
BseLI	CCNNNNNNNGG	7 cut(s)	237, 337, 419, 610, 1067, 1440, 1555
BseMII	CTCAG	5 cut(s)	615, 1323, 1350, 1602, 1844
BseYI	CCCAGC	1 cut(s)	1439
BsgI	GTGCAG	2 cut(s)	267, 367
Bsh1236I	CGCG	4 cut(s)	153, 494, 579, 1227
Bsh1285I	CGRYCG	4 cut(s)	235, 298, 335, 398
BshNI	GGYRCC	2 cut(s)	1928, 2008
BshTI	ACCGGT	1 cut(s)	1475
BshVI	ATCGAT	1 cut(s)	687
BsiEI	CGRYCG	4 cut(s)	235, 298, 335, 398
BsiHKAI	GWGCWC	4 cut(s)	63, 1297, 1716, 1759
BsiHKCI	CYCGRG	1 cut(s)	971
BslFI	GGGAC	2 cut(s)	164, 1957
BslI	CCNNNNNNNGG	7 cut(s)	237, 337, 419, 610, 1067, 1440, 1555
BsmAI	GTCTC	7 cut(s)	42, 890, 968, 1050, 1659, 1903, 2152
BsmBI	CGTCTC	2 cut(s)	42, 1903
BsmFI	GGGAC	2 cut(s)	164, 1957
BsmI	GAATGC	1 cut(s)	1369
Bso31I	GGTCTC	1 cut(s)	890
BsoBI	CYCGRG	1 cut(s)	971
Bsp1286I	GDGCHC	4 cut(s)	63, 1297, 1716, 1759
Bsp1407I	TGTACA	1 cut(s)	1452
Bsp143I	GATC	9 cut(s)	295, 395, 463, 585, 927, 1617, 1656, 1888, 2132
Bsp19I	CCATGG	1 cut(s)	1185
BspCNI	CTCAG	5 cut(s)	616, 1324, 1351, 1601, 1843
BspDI	ATCGAT	1 cut(s)	687
BspFNI	CGCG	4 cut(s)	153, 494, 579, 1227
BspLI	GGNNCC	7 cut(s)	837, 952, 1741, 1930, 1945, 1946, 2010
BspMAI	CTGCAG	2 cut(s)	916, 1472
BspMI	ACCTGC	1 cut(s)	856
BspPI	GGATC	4 cut(s)	580, 1625, 1896, 2127
BspT107I	GGYRCC	2 cut(s)	1928, 2008
BspTNI	GGTCTC	1 cut(s)	890
BsrBI	CCGCTC	1 cut(s)	425
BsrFI	RCCGGY	4 cut(s)	237, 337, 436, 1475
BsrGI	TGTACA	1 cut(s)	1452
BssAI	RCCGGY	4 cut(s)	237, 337, 436, 1475
BssECI	CCNNGG	6 cut(s)	670, 738, 1185, 1225, 1627, 1692
BssMI	GATC	9 cut(s)	295, 395, 463, 585, 927, 1617, 1656, 1888, 2132
BssNI	GRCGYC	4 cut(s)	35, 284, 384, 474
BssT1I	CCWWGG	2 cut(s)	1185, 1692
Bst2UI	CCWGG	2 cut(s)	797, 2013
Bst4CI	ACNGT	2 cut(s)	1853, 1933
Bst6I	CTCTTC	3 cut(s)	545, 918, 1162
BstACI	GRCGYC	4 cut(s)	35, 284, 384, 474
BstAUI	TGTACA	1 cut(s)	1452
BstBAI	YACGTR	1 cut(s)	28
BstC8I	GCNNGC	8 cut(s)	246, 346, 427, 434, 575, 778, 1147, 1602
BstDEI	CTNAG	6 cut(s)	624, 1320, 1332, 1359, 1588, 1830
BstDSI	CCRYGG	3 cut(s)	1185, 1225, 1627
BstF5I	GGATG	7 cut(s)	636, 748, 778, 1128, 1497, 1564, 1955
BstFNI	CGCG	4 cut(s)	153, 494, 579, 1227
BstHHI	GCGC	1 cut(s)	579
BstKTI	GATC	9 cut(s)	298, 398, 466, 588, 930, 1620, 1659, 1891, 2135
BstMAI	GTCTC	7 cut(s)	42, 890, 968, 1050, 1659, 1903, 2152
BstMBI	GATC	9 cut(s)	295, 395, 463, 585, 927, 1617, 1656, 1888, 2132
BstMCI	CGRYCG	4 cut(s)	235, 298, 335, 398
BstNI	CCWGG	2 cut(s)	797, 2013
BstNSI	RCATGY	3 cut(s)	1723, 1781, 1971
BstSCI	CCNGG	2 cut(s)	795, 2011
BstSFI	CTRYAG	3 cut(s)	912, 1468, 1535
BstUI	CGCG	4 cut(s)	153, 494, 579, 1227
BstV2I	GAAGAC	3 cut(s)	520, 924, 1359
BstX2I	RGATCY	2 cut(s)	585, 1888
BstYI	RGATCY	2 cut(s)	585, 1888
Bsu15I	ATCGAT	1 cut(s)	687
BsuTUI	ATCGAT	1 cut(s)	687
BtgI	CCRYGG	3 cut(s)	1185, 1225, 1627
BtgZI	GCGATG	1 cut(s)	416
BtrI	CACGTC	1 cut(s)	1897
BtsCI	GGATG	7 cut(s)	636, 748, 778, 1128, 1497, 1564, 1955
BtsIMutI	CAGTG	5 cut(s)	839, 1270, 1812, 1849, 2044
BveI	ACCTGC	1 cut(s)	856
Cac8I	GCNNGC	8 cut(s)	246, 346, 427, 434, 575, 778, 1147, 1602
CaiI	CAGNNNCTG	1 cut(s)	1007
CfoI	GCGC	1 cut(s)	579
Cfr10I	RCCGGY	4 cut(s)	237, 337, 436, 1475
Cfr13I	GGNCC	5 cut(s)	714, 732, 799, 1148, 1944
Cfr42I	CCGCGG	1 cut(s)	1228
ClaI	ATCGAT	1 cut(s)	687
CseI	GACGC	4 cut(s)	24, 482, 500, 2040
Csp6I	GTAC	7 cut(s)	511, 964, 1218, 1453, 1804, 1929, 2125
CspAI	ACCGGT	1 cut(s)	1475
CviQI	GTAC	7 cut(s)	511, 964, 1218, 1453, 1804, 1929, 2125
DdeI	CTNAG	6 cut(s)	624, 1320, 1332, 1359, 1588, 1830
DpnI	GATC	9 cut(s)	297, 397, 465, 587, 929, 1619, 1658, 1890, 2134
DpnII	GATC	9 cut(s)	295, 395, 463, 585, 927, 1617, 1656, 1888, 2132
DrdI	GACNNNNNNGTC	1 cut(s)	1559
DseDI	GACNNNNNNGTC	1 cut(s)	1559
EaeI	YGGCCR	4 cut(s)	793, 1188, 1212, 2034
Eam1104I	CTCTTC	3 cut(s)	545, 918, 1162
EarI	CTCTTC	3 cut(s)	545, 918, 1162
Ecl136II	GAGCTC	2 cut(s)	61, 1714
Eco130I	CCWWGG	2 cut(s)	1185, 1692
Eco147I	AGGCCT	1 cut(s)	485
Eco24I	GRGCYC	2 cut(s)	63, 1716
Eco31I	GGTCTC	1 cut(s)	890
Eco47I	GGWCC	1 cut(s)	1944
Eco53kI	GAGCTC	2 cut(s)	61, 1714
Eco57I	CTGAAG	1 cut(s)	1218
Eco72I	CACGTG	1 cut(s)	28
Eco88I	CYCGRG	1 cut(s)	971
EcoICRI	GAGCTC	2 cut(s)	61, 1714
EcoO109I	RGGNCCY	2 cut(s)	799, 1944
EcoRII	CCWGG	2 cut(s)	795, 2011
EcoT14I	CCWWGG	2 cut(s)	1185, 1692
EcoT38I	GRGCYC	2 cut(s)	63, 1716
ErhI	CCWWGG	2 cut(s)	1185, 1692
Esp3I	CGTCTC	2 cut(s)	42, 1903
FaqI	GGGAC	2 cut(s)	164, 1957
FauI	CCCGC	2 cut(s)	418, 785
FbaI	TGATCA	1 cut(s)	1656
FblI	GTMKAC	2 cut(s)	555, 1411
FokI	GGATG	7 cut(s)	623, 755, 785, 1115, 1504, 1571, 1942
FriOI	GRGCYC	2 cut(s)	63, 1716
FspBI	CTAG	1 cut(s)	417
GlaI	GCGC	1 cut(s)	578
GsaI	CCCAGC	1 cut(s)	1443
HgaI	GACGC	4 cut(s)	24, 482, 500, 2040
HhaI	GCGC	1 cut(s)	579
Hin1I	GRCGYC	4 cut(s)	35, 284, 384, 474
Hin6I	GCGC	1 cut(s)	577
HinP1I	GCGC	1 cut(s)	577
HincII	GTYRAC	1 cut(s)	1612
HindII	GTYRAC	1 cut(s)	1612
HinfI	GANTC	5 cut(s)	177, 706, 1071, 1082, 1308
HphI	GGTGA	8 cut(s)	256, 356, 451, 901, 1117, 1490, 1849, 1897
Hpy166II	GTNNAC	5 cut(s)	6, 556, 1412, 1612, 1804
Hpy188III	TCNNGA	7 cut(s)	56, 722, 973, 1049, 1526, 1726, 1820
Hpy8I	GTNNAC	5 cut(s)	6, 556, 1412, 1612, 1804
Hpy99I	CGWCG	4 cut(s)	476, 494, 554, 2056
HpyCH4III	ACNGT	2 cut(s)	1853, 1933
HpyCH4IV	ACGT	6 cut(s)	27, 284, 384, 726, 1521, 1896
HpyF3I	CTNAG	6 cut(s)	624, 1320, 1332, 1359, 1588, 1830
HpySE526I	ACGT	6 cut(s)	27, 284, 384, 726, 1521, 1896
Hsp92I	GRCGYC	4 cut(s)	35, 284, 384, 474
HspAI	GCGC	1 cut(s)	577
KflI	GGGWCCC	1 cut(s)	1944
KpnI	GGTACC	1 cut(s)	1932
Ksp22I	TGATCA	1 cut(s)	1656
KspI	CCGCGG	1 cut(s)	1228
Kzo9I	GATC	9 cut(s)	295, 395, 463, 585, 927, 1617, 1656, 1888, 2132
LmnI	GCTCC	9 cut(s)	66, 110, 406, 422, 832, 841, 1256, 1711, 2015
LweI	GCATC	5 cut(s)	693, 763, 1098, 1471, 1964
MaeI	CTAG	1 cut(s)	417
MaeII	ACGT	6 cut(s)	27, 284, 384, 726, 1521, 1896
MaeIII	GTNAC	7 cut(s)	1033, 1123, 1541, 1577, 1672, 1784, 1903
MalI	GATC	9 cut(s)	297, 397, 465, 587, 929, 1619, 1658, 1890, 2134
MbiI	CCGCTC	1 cut(s)	425
MboI	GATC	9 cut(s)	295, 395, 463, 585, 927, 1617, 1656, 1888, 2132
MfeI	CAATTG	1 cut(s)	2030
MflI	RGATCY	2 cut(s)	585, 1888
MhlI	GDGCHC	4 cut(s)	63, 1297, 1716, 1759
MlsI	TGGCCA	4 cut(s)	795, 1190, 1214, 2036
MluCI	AATT	6 cut(s)	813, 822, 1086, 1140, 1426, 2030
MluI	ACGCGT	1 cut(s)	492
MluNI	TGGCCA	4 cut(s)	795, 1190, 1214, 2036
MlyI	GAGTC	2 cut(s)	186, 1091
MmeI	TCCRAC	3 cut(s)	513, 1096, 1117
Mox20I	TGGCCA	4 cut(s)	795, 1190, 1214, 2036
MroXI	GAANNNNTTC	1 cut(s)	1343
MscI	TGGCCA	4 cut(s)	795, 1190, 1214, 2036
MseI	TTAA	5 cut(s)	480, 855, 1425, 2109, 2167
MslI	CAYNNNNRTG	1 cut(s)	1862
Msp20I	TGGCCA	4 cut(s)	795, 1190, 1214, 2036
MspA1I	CMGCKG	2 cut(s)	502, 1227
MspR9I	CCNGG	2 cut(s)	797, 2013
MunI	CAATTG	1 cut(s)	2030
Mva1269I	GAATGC	1 cut(s)	1369
MvaI	CCWGG	2 cut(s)	797, 2013
MvnI	CGCG	4 cut(s)	153, 494, 579, 1227
NcoI	CCATGG	1 cut(s)	1185
NdeII	GATC	9 cut(s)	295, 395, 463, 585, 927, 1617, 1656, 1888, 2132
NlaIV	GGNNCC	7 cut(s)	837, 952, 1741, 1930, 1945, 1946, 2010
NmeAIII	GCCGAG	4 cut(s)	651, 763, 963, 1295
NmuCI	GTSAC	4 cut(s)	1123, 1541, 1672, 1903
NspI	RCATGY	3 cut(s)	1723, 1781, 1971
PaeR7I	CTCGAG	1 cut(s)	971
PceI	AGGCCT	1 cut(s)	485
PcsI	WCGNNNNNNNCGW	3 cut(s)	241, 341, 468
PctI	GAATGC	1 cut(s)	1369
PdmI	GAANNNNTTC	1 cut(s)	1343
PfeI	GAWTC	3 cut(s)	706, 1071, 1308
PinAI	ACCGGT	1 cut(s)	1475
Ple19I	CGATCG	2 cut(s)	298, 398
PleI	GAGTC	2 cut(s)	185, 1090
PmaCI	CACGTG	1 cut(s)	28
PmlI	CACGTG	1 cut(s)	28
PpsI	GAGTC	2 cut(s)	185, 1090
Ppu21I	YACGTR	1 cut(s)	28
PpuMI	RGGWCCY	1 cut(s)	1944
Psp124BI	GAGCTC	2 cut(s)	63, 1716
Psp1406I	AACGTT	1 cut(s)	1521
Psp5II	RGGWCCY	1 cut(s)	1944
Psp6I	CCWGG	2 cut(s)	795, 2011
PspCI	CACGTG	1 cut(s)	28
PspFI	CCCAGC	1 cut(s)	1439
PspGI	CCWGG	2 cut(s)	795, 2011
PspN4I	GGNNCC	7 cut(s)	837, 952, 1741, 1930, 1945, 1946, 2010
PspPI	GGNCC	5 cut(s)	714, 732, 799, 1148, 1944
PspPPI	RGGWCCY	1 cut(s)	1944
PsrI	GAACNNNNNNTAC	2 cut(s)	1445, 1477
PstI	CTGCAG	2 cut(s)	916, 1472
PstNI	CAGNNNCTG	1 cut(s)	1007
PsuI	RGATCY	2 cut(s)	585, 1888
PvuI	CGATCG	2 cut(s)	298, 398
RsaI	GTAC	7 cut(s)	512, 965, 1219, 1454, 1805, 1930, 2126
RsaNI	GTAC	7 cut(s)	511, 964, 1218, 1453, 1804, 1929, 2125
RseI	CAYNNNNRTG	1 cut(s)	1862
SacI	GAGCTC	2 cut(s)	63, 1716
SacII	CCGCGG	1 cut(s)	1228
SaqAI	TTAA	5 cut(s)	480, 855, 1425, 2109, 2167
Sau3AI	GATC	9 cut(s)	295, 395, 463, 585, 927, 1617, 1656, 1888, 2132
Sau96I	GGNCC	5 cut(s)	714, 732, 799, 1148, 1944
SchI	GAGTC	2 cut(s)	186, 1091
ScrFI	CCNGG	2 cut(s)	797, 2013
SduI	GDGCHC	4 cut(s)	63, 1297, 1716, 1759
SfaNI	GCATC	5 cut(s)	693, 763, 1098, 1471, 1964
SfcI	CTRYAG	3 cut(s)	912, 1468, 1535
Sfr274I	CTCGAG	1 cut(s)	971
Sfr303I	CCGCGG	1 cut(s)	1228
SgrAI	CRCCGGYG	3 cut(s)	237, 337, 1475
SgrBI	CCGCGG	1 cut(s)	1228
SinI	GGWCC	1 cut(s)	1944
SlaI	CTCGAG	1 cut(s)	971
SmiMI	CAYNNNNRTG	1 cut(s)	1862
SmlI	CTYRAG	4 cut(s)	764, 971, 1049, 1724
SmoI	CTYRAG	4 cut(s)	764, 971, 1049, 1724
Sse9I	AATT	6 cut(s)	813, 822, 1086, 1140, 1426, 2030
SseBI	AGGCCT	1 cut(s)	485
SspMI	CTAG	1 cut(s)	417
SstI	GAGCTC	2 cut(s)	63, 1716
StuI	AGGCCT	1 cut(s)	485
StyD4I	CCNGG	2 cut(s)	795, 2011
StyI	CCWWGG	2 cut(s)	1185, 1692
TaaI	ACNGT	2 cut(s)	1853, 1933
TaiI	ACGT	6 cut(s)	30, 287, 387, 729, 1524, 1899
TaqI	TCGA	8 cut(s)	298, 462, 687, 972, 1074, 1161, 1527, 1620
TasI	AATT	6 cut(s)	813, 822, 1086, 1140, 1426, 2030
TatI	WGTACW	2 cut(s)	1452, 2124
TauI	GCSGC	5 cut(s)	432, 502, 737, 907, 1703
TfiI	GAWTC	3 cut(s)	706, 1071, 1308
Tru1I	TTAA	5 cut(s)	480, 855, 1425, 2109, 2167
Tru9I	TTAA	5 cut(s)	480, 855, 1425, 2109, 2167
TscAI	CASTG	5 cut(s)	846, 1270, 1819, 1856, 2044
TseFI	GTSAC	4 cut(s)	1123, 1541, 1672, 1903
Tsp45I	GTSAC	4 cut(s)	1123, 1541, 1672, 1903
TspDTI	ATGAA	5 cut(s)	461, 649, 1336, 1508, 2135
TspGWI	ACGGA	2 cut(s)	538, 1083
TspRI	CASTG	5 cut(s)	846, 1270, 1819, 1856, 2044
VpaK11BI	GGWCC	1 cut(s)	1944
XceI	RCATGY	3 cut(s)	1723, 1781, 1971
XhoI	CTCGAG	1 cut(s)	971
XmiI	GTMKAC	2 cut(s)	555, 1411
XmnI	GAANNNNTTC	1 cut(s)	1343
XspI	CTAG	1 cut(s)	417
ZraI	GACGTC	2 cut(s)	285, 385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.