Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Forward (+)

14833757 .. 14840691

Gene Structure 6935 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g17100.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGACGTCCGAAGGCGATCGGCGGGAGGAGCAGGCAGGCCGGTGAACGGGGCGGTGAAAATGAAGGTCAAGATGGTGGATCATCATCATCATCAAAACGACGCCGCTAAGGCCTCAGACGCGTTGCCGCTGCCGCTTTACCTCACCAACGCCGTGTTCTTCACTCTCTTCTTCTCCGTCGTCTACTTCTTGCTCACTCGGTGGCGCGAGAAGATCCGCACCTCCACTCCTCTCCACATGGTCAATCTCTCCGAGATTGTTGCTATTCTTGCCTTTGTCGCCTCCTTCATCTATCTCCTCGGCTTCTTCGGCATCGATTTCGTTCAGTCCCTGATTCTCCGGCCCAGTAACGATGTCTGGGCCGCCGAGGATGAAGAGGATGACATCATTCTCAAGGAGGATGCTCGCACAGTGCCGTGCGGCCAGGCTCTTGATTGCTCGGTTCCCATAATTGCGCCGCTGAAACCGGCTCTTAAAGTTGCACAGAAGGTGTTTGATAAAGAGGTAGTGACCGAGACGGCACCGCCGAGTGCGGAGGACGAGGAGATCATCAAGGCTGTGGTGGCCGGAACCATTCCCTCGTACTCACTCGAGACGAAGCTGGGAGATTGCAAGAGGGCGGCTTCTATTCGGCGCGAGGCTTTGCAAAGAGTTACAGGCAAGTCTCTTGAGGGTTTGCCTTTGGAGGGATTCGATTACGAGTCGATTTTGGGCCAATGCTGTGAAATGCCAGTGGGCTATGTCACCATTCCTGTTGGGATTGCCGGCCCTATTATGCTTGATGGAAGAGAGTTTTCGATCCCCATGGCCACGACTGAAGGTTGCTTGGTGGCCAGTACCAACCGTGGCTGCAAAGCTATTAACTTGTCTGGTGGAGCTTCCAGTGTGCTATTGAAAGATGGAATGACTAGAGCACCTGTTGTGAGGTTCAACTCCGCTAAGAGAGCCGCTGAGTTGAAGTTCTTCATGGAAGACCCCGAGAATGCCGACACCATAGCCACGCTTTTCAACAAATCCAGCAGATTCGGTAGACTTCAGTCAGTTAAGTGTGCTGTTGCTGGGAAGAACCTGTACATGAGATTCTGCTGCAGCACCGGTGATGCTATGGGGATGAACATGGTCTCTAAAGGTGTTCAAAATGTTCTCGATTTCCTCCAGGATGACTTCCCCGACATGGATGTCATTGGCATTTCTGGTAACTACTGTTCAGACAAGAAGCCTGCCGCTGTCAACTGGATCGAAGGCCGTGGCAAGTCAGTGGTCTGTGAGGCTTTGATCAAGGGAGACATAGTGACAAAGGTGCTAAAAACCAACGTTGCGGCTTTGGTGGAGCTTAACATGCTCAAGAACCTTACCGGTTCCGCTATTGCTGGTGCTCTTGGTGGTTTCAATGCACATGCCAGTAACATTGTTTCAGCAGTCTATCTTGCCACTGGTCAAGACCCTGCTCAGAACATTGAGAGTTCTCACTGTATCACCATGATGGAAGCCATCAATGATGGCAAAGATCTTCATGTCTCTGTCACCATGCCTTCTATTGAGGTTGGTACCGTAGGAGGAGGGACCCAACTTGCATCTCAGTCAGCATGTTTGAACTTGCTTGGAGTGAAGGGTGCTAACAGAGAGGCACCAGGAGCGAACGCAAGGCAATTGGCAAGTGTTGTAGCTGCTTCAGTTCTTGCTGCGGAGCTTTCTCTTATGTCTGCTATCGCTGCTGGTCAGCTCGTTAATAGCCACATGAGGTACAACAGATCCAGCAGAGATGTCTCAGCAATGGTTTCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

596

Amino Acids

63.49

Weight (kDa)

6.35

Isoelectric Point (pI)

36.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	208 - 584	1.6e-144	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1178
AatII	GACGTC	1 cut(s)	9
Acc65I	GGTACC	1 cut(s)	1547
AccB1I	GGYRCC	3 cut(s)	520, 1547, 1627
AccI	GTMKAC	2 cut(s)	183, 1030
AccII	CGCG	3 cut(s)	122, 207, 636
AclI	AACGTT	1 cut(s)	1314
AclWI	GGATC	5 cut(s)	87, 208, 793, 1244, 1746
AcoI	YGGCCR	4 cut(s)	421, 564, 807, 831
AcuI	CTGAAG	3 cut(s)	837, 1019, 1656
AcyI	GRCGYC	2 cut(s)	6, 102
AdeI	CACNNNGTG	1 cut(s)	201
AfaI	GTAC	5 cut(s)	584, 838, 1073, 1549, 1745
AfiI	CCNNNNNNNGG	3 cut(s)	47, 686, 1174
AflIII	ACRYGT	1 cut(s)	120
AgeI	ACCGGT	2 cut(s)	1094, 1355
AgsI	TTSAA	7 cut(s)	895, 931, 958, 1009, 1136, 1390, 1594
AjnI	CCWGG	3 cut(s)	423, 1155, 1630
AjuI	GAANNNNNNNTTGG	2 cut(s)	140, 172
AluBI	AGCT	7 cut(s)	601, 857, 878, 1333, 1667, 1690, 1723
AluI	AGCT	7 cut(s)	601, 857, 878, 1333, 1667, 1690, 1723
Alw21I	GWGCWC	2 cut(s)	916, 1378
Alw26I	GTCTC	7 cut(s)	509, 587, 669, 1126, 1278, 1522, 1771
AlwI	GGATC	5 cut(s)	87, 208, 793, 1244, 1746
AlwNI	CAGNNNCTG	1 cut(s)	331
Ama87I	CYCGRG	2 cut(s)	590, 977
ApeKI	GCWGC	7 cut(s)	130, 849, 1086, 1089, 1667, 1682, 1712
AsiGI	ACCGGT	2 cut(s)	1094, 1355
Asp700I	GAANNNNTTC	1 cut(s)	962
Asp718I	GGTACC	1 cut(s)	1547
AspLEI	GCGC	3 cut(s)	207, 457, 636
AspS9I	GGNCC	5 cut(s)	342, 360, 712, 767, 1563
AsuHPI	GGTGA	7 cut(s)	55, 67, 136, 736, 1109, 1468, 1516
AvaI	CYCGRG	2 cut(s)	590, 977
AvaII	GGWCC	1 cut(s)	1563
BalI	TGGCCA	2 cut(s)	809, 833
BanI	GGYRCC	3 cut(s)	520, 1547, 1627
BarI	GAAGNNNNNNTAC	2 cut(s)	1055, 1087
BbsI	GAAGAC	1 cut(s)	978
Bbv12I	GWGCWC	2 cut(s)	916, 1378
BbvI	GCAGC	7 cut(s)	117, 836, 1073, 1101, 1654, 1669, 1699
BccI	CCATC	6 cut(s)	67, 776, 893, 1477, 1493, 1499
BceAI	ACGGC	4 cut(s)	137, 400, 534, 1230
BcgI	CGANNNNNNTGC	4 cut(s)	242, 276, 301, 335
BciT130I	CCWGG	3 cut(s)	425, 1157, 1632
BclI	TGATCA	1 cut(s)	1275
BcoDI	GTCTC	7 cut(s)	509, 587, 669, 1126, 1278, 1522, 1771
BfaI	CTAG	1 cut(s)	909
BfmI	CTRYAG	1 cut(s)	1087
BglI	GCCNNNNNGGC	1 cut(s)	110
BglII	AGATCT	1 cut(s)	1507
Bme1390I	CCNGG	3 cut(s)	425, 1157, 1632
Bme18I	GGWCC	1 cut(s)	1563
BmeT110I	CYCGRG	2 cut(s)	590, 977
BmgT120I	GGNCC	5 cut(s)	342, 360, 712, 767, 1563
BmiI	GGNNCC	8 cut(s)	444, 522, 571, 1360, 1549, 1564, 1565, 1629
BmrFI	CCNGG	3 cut(s)	425, 1157, 1632
BmrI	ACTGGG	1 cut(s)	339
BmsI	GCATC	4 cut(s)	321, 391, 1090, 1583
BmuI	ACTGGG	1 cut(s)	339
BoxI	GACNNNNGTC	1 cut(s)	1036
BpiI	GAAGAC	1 cut(s)	978
BpmI	CTGGAG	1 cut(s)	1139
Bpu10I	CCTNAGC	1 cut(s)	108
BpuEI	CTTGAG	3 cut(s)	377, 689, 1328
Bsa29I	ATCGAT	1 cut(s)	315
BsaBI	GATNNNNATC	1 cut(s)	84
BsaHI	GRCGYC	2 cut(s)	6, 102
BsaI	GGTCTC	1 cut(s)	1126
BsaJI	CCNNGG	5 cut(s)	298, 366, 804, 844, 1246
BsaWI	WCCGGW	2 cut(s)	1094, 1355
BsaXI	ACNNNNNCTCC	4 cut(s)	211, 241, 1275, 1305
Bsc4I	CCNNNNNNNGG	3 cut(s)	47, 686, 1174
Bse118I	RCCGGY	5 cut(s)	40, 466, 764, 1094, 1355
Bse1I	ACTGG	7 cut(s)	345, 731, 834, 882, 1238, 1401, 1438
Bse3DI	GCAATG	1 cut(s)	1779
Bse8I	GATNNNNATC	1 cut(s)	84
BseBI	CCWGG	3 cut(s)	425, 1157, 1632
BseCI	ATCGAT	1 cut(s)	315
BseDI	CCNNGG	5 cut(s)	298, 366, 804, 844, 1246
BseGI	GGATG	6 cut(s)	376, 385, 406, 1116, 1165, 1183
BseJI	GATNNNNATC	1 cut(s)	84
BseLI	CCNNNNNNNGG	3 cut(s)	47, 686, 1174
BseMI	GCAATG	1 cut(s)	1779
BseMII	CTCAG	5 cut(s)	129, 942, 1463, 1592, 1782
BseNI	ACTGG	7 cut(s)	345, 731, 834, 882, 1238, 1401, 1438
BseRI	GAGGAG	5 cut(s)	42, 219, 287, 557, 1572
BseXI	GCAGC	7 cut(s)	117, 836, 1073, 1101, 1654, 1669, 1699
BseYI	CCCAGC	2 cut(s)	601, 1058
Bsh1236I	CGCG	3 cut(s)	122, 207, 636
Bsh1285I	CGRYCG	1 cut(s)	20
BshNI	GGYRCC	3 cut(s)	520, 1547, 1627
BshTI	ACCGGT	2 cut(s)	1094, 1355
BshVI	ATCGAT	1 cut(s)	315
BsiEI	CGRYCG	1 cut(s)	20
BsiHKAI	GWGCWC	2 cut(s)	916, 1378
BsiHKCI	CYCGRG	2 cut(s)	590, 977
BsiSI	CCGG	7 cut(s)	41, 340, 467, 567, 765, 1095, 1356
BslFI	GGGAC	2 cut(s)	313, 1576
BslI	CCNNNNNNNGG	3 cut(s)	47, 686, 1174
BsmAI	GTCTC	7 cut(s)	509, 587, 669, 1126, 1278, 1522, 1771
BsmBI	CGTCTC	2 cut(s)	509, 587
BsmFI	GGGAC	2 cut(s)	313, 1576
BsmI	GAATGC	1 cut(s)	988
Bso31I	GGTCTC	1 cut(s)	1126
BsoBI	CYCGRG	2 cut(s)	590, 977
Bsp1286I	GDGCHC	2 cut(s)	916, 1378
Bsp1407I	TGTACA	1 cut(s)	1071
Bsp143I	GATC	9 cut(s)	17, 79, 213, 546, 798, 1236, 1275, 1507, 1751
Bsp19I	CCATGG	1 cut(s)	804
BspCNI	CTCAG	5 cut(s)	128, 943, 1462, 1591, 1781
BspDI	ATCGAT	1 cut(s)	315
BspFNI	CGCG	3 cut(s)	122, 207, 636
BspLI	GGNNCC	8 cut(s)	444, 522, 571, 1360, 1549, 1564, 1565, 1629
BspMAI	CTGCAG	1 cut(s)	1091
BspPI	GGATC	5 cut(s)	87, 208, 793, 1244, 1746
BspT107I	GGYRCC	3 cut(s)	520, 1547, 1627
BspTNI	GGTCTC	1 cut(s)	1126
BsrDI	GCAATG	1 cut(s)	1779
BsrFI	RCCGGY	5 cut(s)	40, 466, 764, 1094, 1355
BsrGI	TGTACA	1 cut(s)	1071
BsrI	ACTGG	7 cut(s)	345, 731, 834, 882, 1238, 1401, 1438
BssAI	RCCGGY	5 cut(s)	40, 466, 764, 1094, 1355
BssECI	CCNNGG	5 cut(s)	298, 366, 804, 844, 1246
BssMI	GATC	9 cut(s)	17, 79, 213, 546, 798, 1236, 1275, 1507, 1751
BssNI	GRCGYC	2 cut(s)	6, 102
BssT1I	CCWWGG	1 cut(s)	804
Bst2UI	CCWGG	3 cut(s)	425, 1157, 1632
Bst4CI	ACNGT	5 cut(s)	412, 845, 1205, 1472, 1552
Bst6I	CTCTTC	3 cut(s)	173, 369, 781
BstACI	GRCGYC	2 cut(s)	6, 102
BstAUI	TGTACA	1 cut(s)	1071
BstC8I	GCNNGC	5 cut(s)	34, 38, 406, 766, 1221
BstDEI	CTNAG	7 cut(s)	108, 115, 939, 951, 1449, 1578, 1768
BstDSI	CCRYGG	3 cut(s)	804, 844, 1246
BstF5I	GGATG	6 cut(s)	376, 385, 406, 1116, 1165, 1183
BstFNI	CGCG	3 cut(s)	122, 207, 636
BstHHI	GCGC	3 cut(s)	207, 457, 636
BstKTI	GATC	9 cut(s)	20, 82, 216, 549, 801, 1239, 1278, 1510, 1754
BstMAI	GTCTC	7 cut(s)	509, 587, 669, 1126, 1278, 1522, 1771
BstMBI	GATC	9 cut(s)	17, 79, 213, 546, 798, 1236, 1275, 1507, 1751
BstMCI	CGRYCG	1 cut(s)	20
BstNI	CCWGG	3 cut(s)	425, 1157, 1632
BstNSI	RCATGY	3 cut(s)	1342, 1400, 1590
BstPAI	GACNNNNGTC	1 cut(s)	1036
BstSCI	CCNGG	3 cut(s)	423, 1155, 1630
BstSFI	CTRYAG	1 cut(s)	1087
BstUI	CGCG	3 cut(s)	122, 207, 636
BstV1I	GCAGC	7 cut(s)	117, 836, 1073, 1101, 1654, 1669, 1699
BstV2I	GAAGAC	1 cut(s)	978
BstX2I	RGATCY	3 cut(s)	213, 1507, 1751
BstYI	RGATCY	3 cut(s)	213, 1507, 1751
Bsu15I	ATCGAT	1 cut(s)	315
BsuTUI	ATCGAT	1 cut(s)	315
BtgI	CCRYGG	3 cut(s)	804, 844, 1246
BtsCI	GGATG	6 cut(s)	376, 385, 406, 1116, 1165, 1183
BtsIMutI	CAGTG	6 cut(s)	417, 738, 889, 1263, 1431, 1468
Cac8I	GCNNGC	5 cut(s)	34, 38, 406, 766, 1221
CaiI	CAGNNNCTG	1 cut(s)	331
CfoI	GCGC	3 cut(s)	207, 457, 636
Cfr10I	RCCGGY	5 cut(s)	40, 466, 764, 1094, 1355
Cfr13I	GGNCC	5 cut(s)	342, 360, 712, 767, 1563
ClaI	ATCGAT	1 cut(s)	315
CseI	GACGC	2 cut(s)	110, 128
Csp6I	GTAC	5 cut(s)	583, 837, 1072, 1548, 1744
CspAI	ACCGGT	2 cut(s)	1094, 1355
CviQI	GTAC	5 cut(s)	583, 837, 1072, 1548, 1744
DdeI	CTNAG	7 cut(s)	108, 115, 939, 951, 1449, 1578, 1768
DpnI	GATC	9 cut(s)	19, 81, 215, 548, 800, 1238, 1277, 1509, 1753
DpnII	GATC	9 cut(s)	17, 79, 213, 546, 798, 1236, 1275, 1507, 1751
DraIII	CACNNNGTG	1 cut(s)	201
DrdI	GACNNNNNNGTC	1 cut(s)	1178
DseDI	GACNNNNNNGTC	1 cut(s)	1178
EaeI	YGGCCR	4 cut(s)	421, 564, 807, 831
Eam1104I	CTCTTC	3 cut(s)	173, 369, 781
EarI	CTCTTC	3 cut(s)	173, 369, 781
Eco130I	CCWWGG	1 cut(s)	804
Eco147I	AGGCCT	1 cut(s)	113
Eco31I	GGTCTC	1 cut(s)	1126
Eco47I	GGWCC	1 cut(s)	1563
Eco57I	CTGAAG	3 cut(s)	837, 1019, 1656
Eco88I	CYCGRG	2 cut(s)	590, 977
EcoO109I	RGGNCCY	1 cut(s)	1563
EcoRII	CCWGG	3 cut(s)	423, 1155, 1630
EcoT14I	CCWWGG	1 cut(s)	804
ErhI	CCWWGG	1 cut(s)	804
Esp3I	CGTCTC	2 cut(s)	509, 587
FaqI	GGGAC	2 cut(s)	313, 1576
FauI	CCCGC	1 cut(s)	16
FbaI	TGATCA	1 cut(s)	1275
FblI	GTMKAC	2 cut(s)	183, 1030
FokI	GGATG	6 cut(s)	383, 392, 413, 1123, 1172, 1190
FspBI	CTAG	1 cut(s)	909
GlaI	GCGC	3 cut(s)	206, 456, 635
GsaI	CCCAGC	2 cut(s)	605, 1062
GsuI	CTGGAG	1 cut(s)	1139
HapII	CCGG	7 cut(s)	41, 340, 467, 567, 765, 1095, 1356
HgaI	GACGC	2 cut(s)	110, 128
HhaI	GCGC	3 cut(s)	207, 457, 636
Hin1I	GRCGYC	2 cut(s)	6, 102
Hin6I	GCGC	3 cut(s)	205, 455, 634
HinP1I	GCGC	3 cut(s)	205, 455, 634
HincII	GTYRAC	1 cut(s)	1231
HindII	GTYRAC	1 cut(s)	1231
HinfI	GANTC	5 cut(s)	334, 690, 701, 1023, 1080
HpaII	CCGG	7 cut(s)	41, 340, 467, 567, 765, 1095, 1356
HphI	GGTGA	7 cut(s)	55, 67, 136, 736, 1109, 1468, 1516
Hpy166II	GTNNAC	4 cut(s)	46, 184, 1031, 1231
Hpy188I	TCNGA	5 cut(s)	11, 118, 253, 1210, 1452
Hpy188III	TCNNGA	7 cut(s)	70, 431, 592, 668, 1145, 1345, 1439
Hpy8I	GTNNAC	4 cut(s)	46, 184, 1031, 1231
Hpy99I	CGWCG	2 cut(s)	104, 182
HpyAV	CCTTC	8 cut(s)	6, 58, 295, 481, 812, 1235, 1542, 1603
HpyCH4III	ACNGT	5 cut(s)	412, 845, 1205, 1472, 1552
HpyCH4IV	ACGT	2 cut(s)	6, 1314
HpyCH4V	TGCA	7 cut(s)	482, 612, 646, 852, 1089, 1394, 1574
HpyF3I	CTNAG	7 cut(s)	108, 115, 939, 951, 1449, 1578, 1768
HpySE526I	ACGT	2 cut(s)	6, 1314
Hsp92I	GRCGYC	2 cut(s)	6, 102
HspAI	GCGC	3 cut(s)	205, 455, 634
KflI	GGGWCCC	1 cut(s)	1563
KpnI	GGTACC	1 cut(s)	1551
KroI	GCCGGC	1 cut(s)	764
KroNI	GCCGGC	1 cut(s)	766
Ksp22I	TGATCA	1 cut(s)	1275
Kzo9I	GATC	9 cut(s)	17, 79, 213, 546, 798, 1236, 1275, 1507, 1751
LmnI	GCTCC	5 cut(s)	29, 875, 1330, 1634, 1687
Lsp1109I	GCAGC	7 cut(s)	117, 836, 1073, 1101, 1654, 1669, 1699
LweI	GCATC	4 cut(s)	321, 391, 1090, 1583
MaeI	CTAG	1 cut(s)	909
MaeII	ACGT	2 cut(s)	6, 1314
MaeIII	GTNAC	8 cut(s)	347, 508, 652, 742, 1196, 1291, 1403, 1522
MalI	GATC	9 cut(s)	19, 81, 215, 548, 800, 1238, 1277, 1509, 1753
MboI	GATC	9 cut(s)	17, 79, 213, 546, 798, 1236, 1275, 1507, 1751
MfeI	CAATTG	1 cut(s)	1649
MflI	RGATCY	3 cut(s)	213, 1507, 1751
MhlI	GDGCHC	2 cut(s)	916, 1378
MlsI	TGGCCA	2 cut(s)	809, 833
MluCI	AATT	2 cut(s)	450, 1649
MluI	ACGCGT	1 cut(s)	120
MluNI	TGGCCA	2 cut(s)	809, 833
MlyI	GAGTC	1 cut(s)	710
Mox20I	TGGCCA	2 cut(s)	809, 833
MroNI	GCCGGC	1 cut(s)	764
MroXI	GAANNNNTTC	1 cut(s)	962
MscI	TGGCCA	2 cut(s)	809, 833
MseI	TTAA	6 cut(s)	474, 861, 1044, 1335, 1728, 1786
MslI	CAYNNNNRTG	1 cut(s)	1481
Msp20I	TGGCCA	2 cut(s)	809, 833
MspA1I	CMGCKG	4 cut(s)	130, 460, 950, 1226
MspI	CCGG	7 cut(s)	41, 340, 467, 567, 765, 1095, 1356
MspR9I	CCNGG	3 cut(s)	425, 1157, 1632
MunI	CAATTG	1 cut(s)	1649
Mva1269I	GAATGC	1 cut(s)	988
MvaI	CCWGG	3 cut(s)	425, 1157, 1632
MvnI	CGCG	3 cut(s)	122, 207, 636
NaeI	GCCGGC	1 cut(s)	766
NcoI	CCATGG	1 cut(s)	804
NdeII	GATC	9 cut(s)	17, 79, 213, 546, 798, 1236, 1275, 1507, 1751
NgoMIV	GCCGGC	1 cut(s)	764
NlaIV	GGNNCC	8 cut(s)	444, 522, 571, 1360, 1549, 1564, 1565, 1629
NmeAIII	GCCGAG	3 cut(s)	279, 391, 552
NmuCI	GTSAC	4 cut(s)	508, 742, 1291, 1522
NspI	RCATGY	3 cut(s)	1342, 1400, 1590
PaeR7I	CTCGAG	1 cut(s)	590
PceI	AGGCCT	1 cut(s)	113
PcsI	WCGNNNNNNNCGW	1 cut(s)	524
PctI	GAATGC	1 cut(s)	988
PdiI	GCCGGC	1 cut(s)	766
PdmI	GAANNNNTTC	1 cut(s)	962
PfeI	GAWTC	4 cut(s)	334, 690, 1023, 1080
PfoI	TCCNGGA	1 cut(s)	1155
PinAI	ACCGGT	2 cut(s)	1094, 1355
Ple19I	CGATCG	1 cut(s)	20
PleI	GAGTC	1 cut(s)	709
PpsI	GAGTC	1 cut(s)	709
PpuMI	RGGWCCY	1 cut(s)	1563
PshAI	GACNNNNGTC	1 cut(s)	1036
Psp1406I	AACGTT	1 cut(s)	1314
Psp5II	RGGWCCY	1 cut(s)	1563
Psp6I	CCWGG	3 cut(s)	423, 1155, 1630
PspFI	CCCAGC	2 cut(s)	601, 1058
PspGI	CCWGG	3 cut(s)	423, 1155, 1630
PspN4I	GGNNCC	8 cut(s)	444, 522, 571, 1360, 1549, 1564, 1565, 1629
PspPI	GGNCC	5 cut(s)	342, 360, 712, 767, 1563
PspPPI	RGGWCCY	1 cut(s)	1563
PsrI	GAACNNNNNNTAC	2 cut(s)	1189, 1221
PstI	CTGCAG	1 cut(s)	1091
PstNI	CAGNNNCTG	1 cut(s)	331
PsuI	RGATCY	3 cut(s)	213, 1507, 1751
PvuI	CGATCG	1 cut(s)	20
RsaI	GTAC	5 cut(s)	584, 838, 1073, 1549, 1745
RsaNI	GTAC	5 cut(s)	583, 837, 1072, 1548, 1744
RseI	CAYNNNNRTG	1 cut(s)	1481
SaqAI	TTAA	6 cut(s)	474, 861, 1044, 1335, 1728, 1786
Sau3AI	GATC	9 cut(s)	17, 79, 213, 546, 798, 1236, 1275, 1507, 1751
Sau96I	GGNCC	5 cut(s)	342, 360, 712, 767, 1563
SchI	GAGTC	1 cut(s)	710
ScrFI	CCNGG	3 cut(s)	425, 1157, 1632
SduI	GDGCHC	2 cut(s)	916, 1378
SfaNI	GCATC	4 cut(s)	321, 391, 1090, 1583
SfcI	CTRYAG	1 cut(s)	1087
Sfr274I	CTCGAG	1 cut(s)	590
SgrAI	CRCCGGYG	1 cut(s)	1094
SinI	GGWCC	1 cut(s)	1563
SlaI	CTCGAG	1 cut(s)	590
SmiMI	CAYNNNNRTG	1 cut(s)	1481
SmlI	CTYRAG	4 cut(s)	392, 590, 668, 1343
SmoI	CTYRAG	4 cut(s)	392, 590, 668, 1343
Sse9I	AATT	2 cut(s)	450, 1649
SseBI	AGGCCT	1 cut(s)	113
SspMI	CTAG	1 cut(s)	909
StuI	AGGCCT	1 cut(s)	113
StyD4I	CCNGG	3 cut(s)	423, 1155, 1630
StyI	CCWWGG	1 cut(s)	804
TaaI	ACNGT	5 cut(s)	412, 845, 1205, 1472, 1552
TaiI	ACGT	2 cut(s)	9, 1317
TaqI	TCGA	7 cut(s)	315, 591, 693, 704, 797, 1146, 1239
TaqII	GACCGA	1 cut(s)	527
TasI	AATT	2 cut(s)	450, 1649
TatI	WGTACW	1 cut(s)	1071
TfiI	GAWTC	4 cut(s)	334, 690, 1023, 1080
Tru1I	TTAA	6 cut(s)	474, 861, 1044, 1335, 1728, 1786
Tru9I	TTAA	6 cut(s)	474, 861, 1044, 1335, 1728, 1786
TscAI	CASTG	6 cut(s)	417, 738, 889, 1263, 1438, 1475
TseFI	GTSAC	4 cut(s)	508, 742, 1291, 1522
TseI	GCWGC	7 cut(s)	130, 849, 1086, 1089, 1667, 1682, 1712
Tsp45I	GTSAC	4 cut(s)	508, 742, 1291, 1522
TspDTI	ATGAA	6 cut(s)	77, 277, 387, 955, 1127, 1502
TspGWI	ACGGA	1 cut(s)	166
TspRI	CASTG	6 cut(s)	417, 738, 889, 1263, 1438, 1475
VpaK11BI	GGWCC	1 cut(s)	1563
XceI	RCATGY	3 cut(s)	1342, 1400, 1590
XhoI	CTCGAG	1 cut(s)	590
XmiI	GTMKAC	2 cut(s)	183, 1030
XmnI	GAANNNNTTC	1 cut(s)	962
XspI	CTAG	1 cut(s)	909
ZraI	GACGTC	1 cut(s)	7

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.