Structural maintenance of chromosomes protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 590 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 292, 2102 |
| AccI | GTMKAC | 3 cut(s) | 483, 838, 933 |
| AccII | CGCG | 2 cut(s) | 51, 129 |
| AccIII | TCCGGA | 1 cut(s) | 1791 |
| AcoI | YGGCCR | 1 cut(s) | 27 |
| AcsI | RAATTY | 7 cut(s) | 350, 531, 995, 2311, 2695, 2708, 2982 |
| AcuI | CTGAAG | 7 cut(s) | 471, 497, 935, 1061, 2442, 2486, 3387 |
| AcvI | CACGTG | 1 cut(s) | 2099 |
| AdeI | CACNNNGTG | 1 cut(s) | 2102 |
| AfaI | GTAC | 4 cut(s) | 1327, 1511, 1917, 2071 |
| AfeI | AGCGCT | 1 cut(s) | 301 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 292, 2102, 3064, 3076 |
| AflII | CTTAAG | 1 cut(s) | 1022 |
| AflIII | ACRYGT | 1 cut(s) | 127 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 19, 1562 |
| AhlI | ACTAGT | 1 cut(s) | 1760 |
| AjnI | CCWGG | 6 cut(s) | 59, 364, 894, 1194, 1986, 3024 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3109, 3141 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 297, 329, 3572, 3604 |
| Alw21I | GWGCWC | 3 cut(s) | 1302, 2053, 3452 |
| Alw26I | GTCTC | 5 cut(s) | 2460, 2603, 3157, 3382, 3547 |
| Alw44I | GTGCAC | 1 cut(s) | 2049 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2464, 2770 |
| Ama87I | CYCGRG | 3 cut(s) | 67, 590, 3689 |
| Aor13HI | TCCGGA | 1 cut(s) | 1791 |
| Aor51HI | AGCGCT | 1 cut(s) | 301 |
| AoxI | GGCC | 4 cut(s) | 27, 747, 2475, 3067 |
| ApaLI | GTGCAC | 1 cut(s) | 2049 |
| ApoI | RAATTY | 7 cut(s) | 350, 531, 995, 2311, 2695, 2708, 2982 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 360, 576, 1152, 1887, 2982, 3012 |
| AspLEI | GCGC | 2 cut(s) | 302, 2208 |
| AspS9I | GGNCC | 5 cut(s) | 63, 134, 167, 2832, 3067 |
| AsuC2I | CCSGG | 3 cut(s) | 1656, 3690, 3691 |
| AsuHPI | GGTGA | 8 cut(s) | 103, 275, 530, 1688, 2525, 3091, 3335, 3446 |
| AsuII | TTCGAA | 2 cut(s) | 2058, 3607 |
| AvaI | CYCGRG | 3 cut(s) | 67, 590, 3689 |
| AvaII | GGWCC | 4 cut(s) | 63, 134, 167, 2832 |
| BaeGI | GKGCMC | 2 cut(s) | 2053, 2117 |
| BamHI | GGATCC | 3 cut(s) | 560, 891, 3355 |
| BanII | GRGCYC | 1 cut(s) | 3452 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2882, 2914 |
| BbrPI | CACGTG | 1 cut(s) | 2099 |
| Bbv12I | GWGCWC | 3 cut(s) | 1302, 2053, 3452 |
| BccI | CCATC | 9 cut(s) | 26, 338, 1390, 1666, 2039, 2104, 2266, 3499, 3689 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3113, 3147, 3664, 3698 |
| BciT130I | CCWGG | 6 cut(s) | 61, 366, 896, 1196, 1988, 3026 |
| BciVI | GTATCC | 1 cut(s) | 1644 |
| BcnI | CCSGG | 3 cut(s) | 1656, 3690, 3691 |
| BcoDI | GTCTC | 5 cut(s) | 2460, 2603, 3157, 3382, 3547 |
| BcuI | ACTAGT | 1 cut(s) | 1760 |
| BfaI | CTAG | 5 cut(s) | 488, 650, 1539, 1761, 3341 |
| BfmI | CTRYAG | 2 cut(s) | 934, 1431 |
| BfoI | RGCGCY | 1 cut(s) | 303 |
| BfrI | CTTAAG | 1 cut(s) | 1022 |
| BfuI | GTATCC | 1 cut(s) | 1644 |
| BglII | AGATCT | 4 cut(s) | 671, 1036, 2063, 2788 |
| BlpI | GCTNAGC | 1 cut(s) | 231 |
| Bme1390I | CCNGG | 9 cut(s) | 61, 366, 896, 1196, 1656, 1988, 3026, 3690, 3691 |
| Bme18I | GGWCC | 4 cut(s) | 63, 134, 167, 2832 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 19, 1562 |
| BmeT110I | CYCGRG | 3 cut(s) | 67, 590, 3689 |
| BmgT120I | GGNCC | 5 cut(s) | 63, 134, 167, 2832, 3067 |
| BmiI | GGNNCC | 7 cut(s) | 37, 55, 65, 562, 893, 2347, 3357 |
| BmrFI | CCNGG | 9 cut(s) | 61, 366, 896, 1196, 1656, 1988, 3026, 3690, 3691 |
| BmrI | ACTGGG | 2 cut(s) | 2622, 3326 |
| BmuI | ACTGGG | 2 cut(s) | 2622, 3326 |
| BpmI | CTGGAG | 7 cut(s) | 43, 324, 1217, 1863, 2116, 2471, 2529 |
| Bpu10I | CCTNAGC | 3 cut(s) | 555, 1635, 1974 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 231 |
| Bpu14I | TTCGAA | 2 cut(s) | 2058, 3607 |
| BpuEI | CTTGAG | 4 cut(s) | 1163, 2351, 2387, 3356 |
| BpuMI | CCSGG | 3 cut(s) | 1656, 3690, 3691 |
| Bsa29I | ATCGAT | 2 cut(s) | 3516, 3684 |
| BsaAI | YACGTR | 1 cut(s) | 2099 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1058 |
| BsaI | GGTCTC | 3 cut(s) | 2460, 3157, 3382 |
| BsaWI | WCCGGW | 1 cut(s) | 1791 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 297, 327, 2136, 2166 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 292, 2102, 3064, 3076 |
| Bse118I | RCCGGY | 1 cut(s) | 116 |
| Bse1I | ACTGG | 3 cut(s) | 2133, 2617, 3321 |
| Bse3DI | GCAATG | 6 cut(s) | 196, 210, 1437, 1488, 1952, 3470 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1058 |
| BseAI | TCCGGA | 1 cut(s) | 1791 |
| BseBI | CCWGG | 6 cut(s) | 61, 366, 896, 1196, 1988, 3026 |
| BseCI | ATCGAT | 2 cut(s) | 3516, 3684 |
| BseJI | GATNNNNATC | 1 cut(s) | 1058 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 292, 2102, 3064, 3076 |
| BseMI | GCAATG | 6 cut(s) | 196, 210, 1437, 1488, 1952, 3470 |
| BseMII | CTCAG | 7 cut(s) | 569, 693, 991, 1236, 1584, 2471, 2571 |
| BseNI | ACTGG | 3 cut(s) | 2133, 2617, 3321 |
| BseRI | GAGGAG | 1 cut(s) | 1130 |
| BseSI | GKGCMC | 2 cut(s) | 2053, 2117 |
| BsgI | GTGCAG | 2 cut(s) | 1389, 1785 |
| Bsh1236I | CGCG | 2 cut(s) | 51, 129 |
| BshFI | GGCC | 4 cut(s) | 29, 749, 2477, 3069 |
| BshVI | ATCGAT | 2 cut(s) | 3516, 3684 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1302, 2053, 3452 |
| BsiHKCI | CYCGRG | 3 cut(s) | 67, 590, 3689 |
| BsiSI | CCGG | 4 cut(s) | 117, 1656, 1792, 3690 |
| BslFI | GGGAC | 4 cut(s) | 49, 619, 1564, 3567 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 292, 2102, 3064, 3076 |
| BsmAI | GTCTC | 5 cut(s) | 2460, 2603, 3157, 3382, 3547 |
| BsmFI | GGGAC | 4 cut(s) | 49, 619, 1564, 3567 |
| BsnI | GGCC | 4 cut(s) | 29, 749, 2477, 3069 |
| Bso31I | GGTCTC | 3 cut(s) | 2460, 3157, 3382 |
| BsoBI | CYCGRG | 3 cut(s) | 67, 590, 3689 |
| Bsp119I | TTCGAA | 2 cut(s) | 2058, 3607 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1302, 2053, 2117, 3452 |
| Bsp13I | TCCGGA | 1 cut(s) | 1791 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 231 |
| Bsp19I | CCATGG | 3 cut(s) | 24, 1277, 2181 |
| BspANI | GGCC | 4 cut(s) | 29, 749, 2477, 3069 |
| BspCNI | CTCAG | 7 cut(s) | 568, 694, 990, 1237, 1585, 2470, 2572 |
| BspDI | ATCGAT | 2 cut(s) | 3516, 3684 |
| BspEI | TCCGGA | 1 cut(s) | 1791 |
| BspFNI | CGCG | 2 cut(s) | 51, 129 |
| BspHI | TCATGA | 3 cut(s) | 808, 1821, 2017 |
| BspLI | GGNNCC | 7 cut(s) | 37, 55, 65, 562, 893, 2347, 3357 |
| BspMAI | CTGCAG | 1 cut(s) | 1435 |
| BspQI | GCTCTTC | 1 cut(s) | 215 |
| BspT104I | TTCGAA | 2 cut(s) | 2058, 3607 |
| BspTI | CTTAAG | 1 cut(s) | 1022 |
| BspTNI | GGTCTC | 3 cut(s) | 2460, 3157, 3382 |
| BsrDI | GCAATG | 6 cut(s) | 196, 210, 1437, 1488, 1952, 3470 |
| BsrFI | RCCGGY | 1 cut(s) | 116 |
| BsrI | ACTGG | 3 cut(s) | 2133, 2617, 3321 |
| BssAI | RCCGGY | 1 cut(s) | 116 |
| BssT1I | CCWWGG | 7 cut(s) | 24, 720, 1277, 1804, 2181, 2349, 3576 |
| Bst2UI | CCWGG | 6 cut(s) | 61, 366, 896, 1196, 1988, 3026 |
| Bst4CI | ACNGT | 5 cut(s) | 938, 1529, 1612, 1966, 3588 |
| Bst6I | CTCTTC | 5 cut(s) | 215, 1592, 2418, 3236, 3395 |
| BstAFI | CTTAAG | 1 cut(s) | 1022 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1439 |
| BstBAI | YACGTR | 1 cut(s) | 2099 |
| BstBI | TTCGAA | 2 cut(s) | 2058, 3607 |
| BstDSI | CCRYGG | 3 cut(s) | 24, 1277, 2181 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3062 |
| BstFNI | CGCG | 2 cut(s) | 51, 129 |
| BstH2I | RGCGCY | 1 cut(s) | 303 |
| BstHHI | GCGC | 2 cut(s) | 302, 2208 |
| BstMAI | GTCTC | 5 cut(s) | 2460, 2603, 3157, 3382, 3547 |
| BstNI | CCWGG | 6 cut(s) | 61, 366, 896, 1196, 1988, 3026 |
| BstNSI | RCATGY | 1 cut(s) | 1634 |
| BstSCI | CCNGG | 9 cut(s) | 59, 364, 894, 1194, 1654, 1986, 3024, 3688, 3689 |
| BstSFI | CTRYAG | 2 cut(s) | 934, 1431 |
| BstSLI | GKGCMC | 2 cut(s) | 2053, 2117 |
| BstUI | CGCG | 2 cut(s) | 51, 129 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 802 |
| Bsu15I | ATCGAT | 2 cut(s) | 3516, 3684 |
| BsuI | GTATCC | 1 cut(s) | 1644 |
| BsuRI | GGCC | 4 cut(s) | 29, 749, 2477, 3069 |
| BsuTUI | ATCGAT | 2 cut(s) | 3516, 3684 |
| BtgI | CCRYGG | 3 cut(s) | 24, 1277, 2181 |
| BtsIMutI | CAGTG | 6 cut(s) | 447, 911, 1962, 2140, 2577, 3314 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2464, 2770 |
| CciI | TCATGA | 3 cut(s) | 808, 1821, 2017 |
| CfoI | GCGC | 2 cut(s) | 302, 2208 |
| Cfr10I | RCCGGY | 1 cut(s) | 116 |
| Cfr13I | GGNCC | 5 cut(s) | 63, 134, 167, 2832, 3067 |
| Cfr9I | CCCGGG | 1 cut(s) | 3689 |
| ClaI | ATCGAT | 2 cut(s) | 3516, 3684 |
| CseI | GACGC | 1 cut(s) | 118 |
| Csp6I | GTAC | 4 cut(s) | 1326, 1510, 1916, 2070 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 813, 848 |
| CviQI | GTAC | 4 cut(s) | 1326, 1510, 1916, 2070 |
| DraI | TTTAAA | 2 cut(s) | 1617, 2026 |
| DraIII | CACNNNGTG | 1 cut(s) | 2102 |
| DriI | GACNNNNNGTC | 2 cut(s) | 19, 1562 |
| EaeI | YGGCCR | 1 cut(s) | 27 |
| Eam1104I | CTCTTC | 5 cut(s) | 215, 1592, 2418, 3236, 3395 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 19, 1562 |
| EarI | CTCTTC | 5 cut(s) | 215, 1592, 2418, 3236, 3395 |
| EciI | GGCGGA | 1 cut(s) | 1684 |
| Ecl136II | GAGCTC | 1 cut(s) | 3450 |
| Eco130I | CCWWGG | 7 cut(s) | 24, 720, 1277, 1804, 2181, 2349, 3576 |
| Eco147I | AGGCCT | 1 cut(s) | 749 |
| Eco24I | GRGCYC | 1 cut(s) | 3452 |
| Eco31I | GGTCTC | 3 cut(s) | 2460, 3157, 3382 |
| Eco32I | GATATC | 1 cut(s) | 2237 |
| Eco47I | GGWCC | 4 cut(s) | 63, 134, 167, 2832 |
| Eco47III | AGCGCT | 1 cut(s) | 301 |
| Eco53kI | GAGCTC | 1 cut(s) | 3450 |
| Eco57I | CTGAAG | 7 cut(s) | 471, 497, 935, 1061, 2442, 2486, 3387 |
| Eco72I | CACGTG | 1 cut(s) | 2099 |
| Eco88I | CYCGRG | 3 cut(s) | 67, 590, 3689 |
| EcoICRI | GAGCTC | 1 cut(s) | 3450 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3062 |
| EcoO109I | RGGNCCY | 3 cut(s) | 63, 2832, 3067 |
| EcoRII | CCWGG | 6 cut(s) | 59, 364, 894, 1194, 1986, 3024 |
| EcoRV | GATATC | 1 cut(s) | 2237 |
| EcoT14I | CCWWGG | 7 cut(s) | 24, 720, 1277, 1804, 2181, 2349, 3576 |
| EcoT38I | GRGCYC | 1 cut(s) | 3452 |
| ErhI | CCWWGG | 7 cut(s) | 24, 720, 1277, 1804, 2181, 2349, 3576 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 564, 596, 948, 980, 1065, 1097 |
| FaqI | GGGAC | 4 cut(s) | 49, 619, 1564, 3567 |
| FauI | CCCGC | 2 cut(s) | 2075, 2841 |
| FauNDI | CATATG | 3 cut(s) | 945, 2005, 2973 |
| FblI | GTMKAC | 3 cut(s) | 483, 838, 933 |
| FriOI | GRGCYC | 1 cut(s) | 3452 |
| FspBI | CTAG | 5 cut(s) | 488, 650, 1539, 1761, 3341 |
| GlaI | GCGC | 2 cut(s) | 301, 2207 |
| GsuI | CTGGAG | 7 cut(s) | 43, 324, 1217, 1863, 2116, 2471, 2529 |
| HaeII | RGCGCY | 1 cut(s) | 303 |
| HaeIII | GGCC | 4 cut(s) | 29, 749, 2477, 3069 |
| HapII | CCGG | 4 cut(s) | 117, 1656, 1792, 3690 |
| HgaI | GACGC | 1 cut(s) | 118 |
| HhaI | GCGC | 2 cut(s) | 302, 2208 |
| Hin6I | GCGC | 2 cut(s) | 300, 2206 |
| HinP1I | GCGC | 2 cut(s) | 300, 2206 |
| HincII | GTYRAC | 3 cut(s) | 484, 2587, 2637 |
| HindII | GTYRAC | 3 cut(s) | 484, 2587, 2637 |
| HindIII | AAGCTT | 3 cut(s) | 1337, 2939, 3011 |
| HpaI | GTTAAC | 2 cut(s) | 2587, 2637 |
| HpaII | CCGG | 4 cut(s) | 117, 1656, 1792, 3690 |
| HphI | GGTGA | 8 cut(s) | 103, 275, 530, 1688, 2525, 3091, 3335, 3446 |
| Hpy99I | CGWCG | 2 cut(s) | 20, 134 |
| HpyCH4III | ACNGT | 5 cut(s) | 938, 1529, 1612, 1966, 3588 |
| HpyCH4IV | ACGT | 2 cut(s) | 433, 2098 |
| HpySE526I | ACGT | 2 cut(s) | 433, 2098 |
| HspAI | GCGC | 2 cut(s) | 300, 2206 |
| Kpn2I | TCCGGA | 1 cut(s) | 1791 |
| KroI | GCCGGC | 1 cut(s) | 116 |
| KroNI | GCCGGC | 1 cut(s) | 118 |
| KspAI | GTTAAC | 2 cut(s) | 2587, 2637 |
| LguI | GCTCTTC | 1 cut(s) | 215 |
| LmnI | GCTCC | 5 cut(s) | 4, 53, 919, 2170, 2905 |
| MaeI | CTAG | 5 cut(s) | 488, 650, 1539, 1761, 3341 |
| MaeII | ACGT | 2 cut(s) | 433, 2098 |
| MaeIII | GTNAC | 8 cut(s) | 454, 768, 2035, 2492, 2877, 3053, 3079, 3190 |
| MfeI | CAATTG | 1 cut(s) | 3098 |
| MhlI | GDGCHC | 4 cut(s) | 1302, 2053, 2117, 3452 |
| MluI | ACGCGT | 1 cut(s) | 127 |
| MlyI | GAGTC | 6 cut(s) | 29, 50, 489, 1127, 1609, 3341 |
| MmeI | TCCRAC | 5 cut(s) | 145, 1158, 1668, 3228, 3386 |
| MreI | CGCCGGCG | 1 cut(s) | 116 |
| MroI | TCCGGA | 1 cut(s) | 1791 |
| MroNI | GCCGGC | 1 cut(s) | 116 |
| MroXI | GAANNNNTTC | 6 cut(s) | 360, 576, 1152, 1887, 2982, 3012 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1774 |
| MspA1I | CMGCKG | 1 cut(s) | 2464 |
| MspCI | CTTAAG | 1 cut(s) | 1022 |
| MspI | CCGG | 4 cut(s) | 117, 1656, 1792, 3690 |
| MspR9I | CCNGG | 9 cut(s) | 61, 366, 896, 1196, 1656, 1988, 3026, 3690, 3691 |
| MunI | CAATTG | 1 cut(s) | 3098 |
| MvaI | CCWGG | 6 cut(s) | 61, 366, 896, 1196, 1988, 3026 |
| MvnI | CGCG | 2 cut(s) | 51, 129 |
| NaeI | GCCGGC | 1 cut(s) | 118 |
| NciI | CCSGG | 3 cut(s) | 1656, 3690, 3691 |
| NcoI | CCATGG | 3 cut(s) | 24, 1277, 2181 |
| NdeI | CATATG | 3 cut(s) | 945, 2005, 2973 |
| NgoMIV | GCCGGC | 1 cut(s) | 116 |
| NlaIV | GGNNCC | 7 cut(s) | 37, 55, 65, 562, 893, 2347, 3357 |
| NmuCI | GTSAC | 4 cut(s) | 768, 3053, 3079, 3190 |
| NspI | RCATGY | 1 cut(s) | 1634 |
| NspV | TTCGAA | 2 cut(s) | 2058, 3607 |
| PaeI | GCATGC | 1 cut(s) | 1634 |
| PaeR7I | CTCGAG | 1 cut(s) | 590 |
| PagI | TCATGA | 3 cut(s) | 808, 1821, 2017 |
| PceI | AGGCCT | 1 cut(s) | 749 |
| PciSI | GCTCTTC | 1 cut(s) | 215 |
| PdiI | GCCGGC | 1 cut(s) | 118 |
| PdmI | GAANNNNTTC | 6 cut(s) | 360, 576, 1152, 1887, 2982, 3012 |
| PflFI | GACNNNGTC | 1 cut(s) | 2679 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 292, 2102 |
| PfoI | TCCNGGA | 3 cut(s) | 364, 894, 1194 |
| PleI | GAGTC | 6 cut(s) | 28, 49, 488, 1126, 1608, 3341 |
| PmaCI | CACGTG | 1 cut(s) | 2099 |
| PmlI | CACGTG | 1 cut(s) | 2099 |
| PpsI | GAGTC | 6 cut(s) | 28, 49, 488, 1126, 1608, 3341 |
| Ppu21I | YACGTR | 1 cut(s) | 2099 |
| PpuMI | RGGWCCY | 2 cut(s) | 63, 2832 |
| Psp124BI | GAGCTC | 1 cut(s) | 3452 |
| Psp5II | RGGWCCY | 2 cut(s) | 63, 2832 |
| Psp6I | CCWGG | 6 cut(s) | 59, 364, 894, 1194, 1986, 3024 |
| PspCI | CACGTG | 1 cut(s) | 2099 |
| PspGI | CCWGG | 6 cut(s) | 59, 364, 894, 1194, 1986, 3024 |
| PspN4I | GGNNCC | 7 cut(s) | 37, 55, 65, 562, 893, 2347, 3357 |
| PspPI | GGNCC | 5 cut(s) | 63, 134, 167, 2832, 3067 |
| PspPPI | RGGWCCY | 2 cut(s) | 63, 2832 |
| PspXI | VCTCGAGB | 1 cut(s) | 590 |
| PstI | CTGCAG | 1 cut(s) | 1435 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2464, 2770 |
| PsyI | GACNNNGTC | 1 cut(s) | 2679 |
| PvuII | CAGCTG | 1 cut(s) | 2464 |
| RsaI | GTAC | 4 cut(s) | 1327, 1511, 1917, 2071 |
| RsaNI | GTAC | 4 cut(s) | 1326, 1510, 1916, 2070 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1774 |
| SacI | GAGCTC | 1 cut(s) | 3452 |
| SalI | GTCGAC | 1 cut(s) | 482 |
| SapI | GCTCTTC | 1 cut(s) | 215 |
| Sau96I | GGNCC | 5 cut(s) | 63, 134, 167, 2832, 3067 |
| SchI | GAGTC | 6 cut(s) | 29, 50, 489, 1127, 1609, 3341 |
| ScrFI | CCNGG | 9 cut(s) | 61, 366, 896, 1196, 1656, 1988, 3026, 3690, 3691 |
| SduI | GDGCHC | 4 cut(s) | 1302, 2053, 2117, 3452 |
| SfcI | CTRYAG | 2 cut(s) | 934, 1431 |
| Sfr274I | CTCGAG | 1 cut(s) | 590 |
| SfuI | TTCGAA | 2 cut(s) | 2058, 3607 |
| SgrAI | CRCCGGYG | 1 cut(s) | 116 |
| SinI | GGWCC | 4 cut(s) | 63, 134, 167, 2832 |
| SlaI | CTCGAG | 1 cut(s) | 590 |
| SmaI | CCCGGG | 1 cut(s) | 3691 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1774 |
| SmlI | CTYRAG | 6 cut(s) | 590, 1022, 1142, 2330, 2402, 3335 |
| SmoI | CTYRAG | 6 cut(s) | 590, 1022, 1142, 2330, 2402, 3335 |
| SpeI | ACTAGT | 1 cut(s) | 1760 |
| SphI | GCATGC | 1 cut(s) | 1634 |
| SseBI | AGGCCT | 1 cut(s) | 749 |
| SspI | AATATT | 3 cut(s) | 2413, 2563, 3415 |
| SspMI | CTAG | 5 cut(s) | 488, 650, 1539, 1761, 3341 |
| SstI | GAGCTC | 1 cut(s) | 3452 |
| StuI | AGGCCT | 1 cut(s) | 749 |
| StyD4I | CCNGG | 9 cut(s) | 59, 364, 894, 1194, 1654, 1986, 3024, 3688, 3689 |
| StyI | CCWWGG | 7 cut(s) | 24, 720, 1277, 1804, 2181, 2349, 3576 |
| TaaI | ACNGT | 5 cut(s) | 938, 1529, 1612, 1966, 3588 |
| TaiI | ACGT | 2 cut(s) | 436, 2101 |
| TaqII | GACCGA | 2 cut(s) | 122, 184 |
| TatI | WGTACW | 2 cut(s) | 1325, 1509 |
| TauI | GCSGC | 3 cut(s) | 244, 2595, 3524 |
| TscAI | CASTG | 6 cut(s) | 454, 918, 1969, 2140, 2584, 3321 |
| TseFI | GTSAC | 4 cut(s) | 768, 3053, 3079, 3190 |
| Tsp45I | GTSAC | 4 cut(s) | 768, 3053, 3079, 3190 |
| TspMI | CCCGGG | 1 cut(s) | 3689 |
| TspRI | CASTG | 6 cut(s) | 454, 918, 1969, 2140, 2584, 3321 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2679 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 292, 2102 |
| Vha464I | CTTAAG | 1 cut(s) | 1022 |
| VneI | GTGCAC | 1 cut(s) | 2049 |
| VpaK11BI | GGWCC | 4 cut(s) | 63, 134, 167, 2832 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3062 |
| XapI | RAATTY | 7 cut(s) | 350, 531, 995, 2311, 2695, 2708, 2982 |
| XceI | RCATGY | 1 cut(s) | 1634 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 826, 2609, 3402 |
| XhoI | CTCGAG | 1 cut(s) | 590 |
| XmaI | CCCGGG | 1 cut(s) | 3689 |
| XmiI | GTMKAC | 3 cut(s) | 483, 838, 933 |
| XmnI | GAANNNNTTC | 6 cut(s) | 360, 576, 1152, 1887, 2982, 3012 |
| XspI | CTAG | 5 cut(s) | 488, 650, 1539, 1761, 3341 |