Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001236

Physical Location & Seq

Genomic Coordinates Forward (+)

19684524 .. 19686991

Gene Structure 2468 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0219200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGTGTTGATGGAATATGATGGTGTAACACCAGTTGAGAAGATCCCTCTGAACCTACTTTACTATTGGGTACGTATCACTAATATCCCTCCTGCTTATGAGAAAAAAGAAACTATCATGGATATTGCTACTGTGGCTGGCCATCCCCTTGAACTTGATGAAAGGCTTTTTAACAACAAAGGGGAGATTAGGGTTAGGGTTAGCCATAATATCCTGAAACCAATTTTTTTGGAGAAAAAGCTGAAAATTGATGATGGGGTTGAAGAGGTAATCCATTACAATTTTGACAATCTCTTTGGACGTTGTGAGGATTGCTTGTTGGTCTTCCATCCTACAGGTTCGTGTCCTGCTGCAGGAAAAAATAAAAACACGACTGTGGTGCAAACTCATGTACCAAAAATTGATTTTCTGAATAGGAATTTTCTGGTTGATGGCATGCCATTTACTTTTAAATTCTCTATTCCAACTGCTATTACTATATCACCTTTTGTGAACCTGAAAGATACAGGGGATCGTAAGGCCAAAAGGTCTATTGTGCTTCGTGAGCCTGACACAAGAAAAGACAATGATTTAGCTATTGTGCCTGTTGAAGATCAATTTCCCAGCAAGAGAGGTAGGCGTACTCCTACCCCTTCACCTCAGAAAGTTCAAATCCCAATTCTGATCGGTGAAAACAGAGGACAAGTGGCTCAACCAAAGAAGCTCAAGATGCCTGAATTCACCACCAAATTTACTGCAAAATCTTTGGGGCTTCAGGAAACTCCAGGAGGTTTAATGGTGCCAGTCGAGGCTACAGGGACAAAGAAGAAAAGGGGGCGTCCTCTTGGAGCTCGAAATAAAAATCCATCAAAGACCAAGATTGAAAAGAAATCTGCTTCTCCATTGTGTCTCACCGATTCACCATGTTCCTCTAGCCCTTCGGGTCAGGGCAAGGGGAAAGGGATTGAGAAATTCAAGTCGGTATGGGTCCTTGTGGTGAACTCAGATATCCTGCTTATCCAGAGAGCAATGGAACATGGAAGTTTCCTGGAATTGGAGAATTTCAATGCTATGACAATTGACAAGTACATGAAAGCCCTGGAAGCATCAGCAGAGGCACAAGGAAAGAGAGATTGGGGAAGGACTGGACCCCATGATTCCGGCCAGTACAATCAGTTTCCTGAAGACACCGAATTTTTCAAAAGAGATGGAACCTGGAATACAGTATGGACAGTTCTTCCTCGAATGGTGCTCAGAGAAGCTATTAAGGTAGCTGGGATTTGTTGGCACTACAGAATAAGATCCCATGCTGCTGAATTAACTGCTGGCTACTATAATACTAGACTTAGAGATGGTTACATACCAACAGCAAAAATGTTCAGCAAACATGGGGTTGTAATATTAAACTTCACCTGCATGGAAATGAAAGATGGAGAACAGCCCGACAATGCAAATTGCTTGCCTGAGGGATCAGATTCCAGCAATGCATTGAGTGCTTTCACATATCTAAGATTGAATAAGAGATTGTTCGAAGGGGACAACTGGCGGAACATGGTTGAATTTGTGAAAGGCATGGCTGAAGGTGGCCGGAATGAAAGACTGACAGAGTGCAACTCCACTGGCATCGACCTTGTTGTTCATTTTATCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000070 GO:0000278 GO:0000280 GO:0000819 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006323 GO:0006996 GO:0007049 GO:0007059 GO:0007076 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016043 GO:0022402 GO:0022414 GO:0030261 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048285 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051276 GO:0061458 GO:0071103 GO:0071840 GO:0098813 GO:0140014 GO:1903047

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

SMC_N SMC_hinge

Protein Analysis

543

Amino Acids

61.2

Weight (kDa)

9.18

Isoelectric Point (pI)

41.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_14	PF01373	353 - 402	8.3e-08	Glycosyl hydrolase family 14
Glyco_hydro_14	PF01373	414 - 483	8e-25	Glycosyl hydrolase family 14

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001236)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48600 AT5G48600
fragaria_vesca	FvH4_2g39941 FvH4_2g39941 FvH4_2g39941 FvH4_2g39941 FvH4_2g39941 FvH4_2g39941 FvH4_4g18080 FvH4_5g30910 FvH4_5g30910 FvH4_5g30910 FvH4_6g23280
malus_domestica	MD02G1198100.v1.1
prunus_persica	Prupe.3G267300_v2.0.a1 Prupe.3G267300_v2.0.a1
pyrus_communis	pycom02g16170
rosa_chinensis	RchiOBHm_Chr5g0008421 RchiOBHm_Chr6g0300801 RchiOBHm_Chr7g0223681 RchiOBHm_Chr7g0223741 RchiOBHm_Chr7g0226461
rosa_laevigata	RLG00000001729 RLG00000011300 RLG00000031570
rosa_multiflora	Rmu_sc0001470.1_g000005 Rmu_sc0001903.1_g000024 Rmu_sc0002826.1_g000022 Rmu_sc0008947.1_g000001
rosa_roxburghii	Rroxscaffold_3G00232810 Rroxscaffold_3G00235410 Rroxscaffold_7G00167400
rosa_rugosa	Rorug06G0299200 Rorug07G0218700 Rorug07G0219100 Rorug07G0219200 Rorug07G0237300
rosa_samantha	Rh6AG412200 Rh6BG419400 Rh6CG426900 Rh6DG412200 Rh7AG362000 Rh7AG384400 Rh7AG384500 Rh7BG353400 Rh7BG353500 Rh7BG371100 Rh7CG380600 Rh7CG403700 Rh7CG403800 Rh7DG356900 Rh7DG357400 Rh7DG383200
rosa_wichuraiana	Rw7G030730 Rw7G030770 Rw7G032280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1400
Acc36I	ACCTGC	1 cut(s)	1400
AccB1I	GGYRCC	1 cut(s)	778
AciI	CCGC	1 cut(s)	1525
AclWI	GGATC	4 cut(s)	37, 519, 1275, 1456
AcoI	YGGCCR	3 cut(s)	139, 1141, 1564
AcsI	RAATTY	8 cut(s)	418, 452, 716, 728, 950, 1039, 1172, 1538
AcuI	CTGAAG	3 cut(s)	737, 1182, 1578
AcyI	GRCGYC	1 cut(s)	817
AfaI	GTAC	5 cut(s)	72, 393, 622, 1067, 1148
AfiI	CCNNNNNNNGG	2 cut(s)	353, 1033
AjnI	CCWGG	4 cut(s)	763, 1026, 1077, 1193
AjuI	GAANNNNNNNTTGG	2 cut(s)	1096, 1128
AleI	CACNNNNGTG	1 cut(s)	374
AluBI	AGCT	6 cut(s)	241, 575, 703, 830, 1241, 1253
AluI	AGCT	6 cut(s)	241, 575, 703, 830, 1241, 1253
Alw21I	GWGCWC	2 cut(s)	832, 1233
Alw26I	GTCTC	1 cut(s)	893
AlwI	GGATC	4 cut(s)	37, 519, 1275, 1456
AoxI	GGCC	4 cut(s)	139, 519, 1141, 1564
ApeKI	GCWGC	2 cut(s)	350, 1289
ApoI	RAATTY	8 cut(s)	418, 452, 716, 728, 950, 1039, 1172, 1538
ArsI	GACNNNNNNTTYG	2 cut(s)	278, 310
AspS9I	GGNCC	2 cut(s)	967, 1127
AsuHPI	GGTGA	8 cut(s)	474, 627, 680, 712, 883, 891, 988, 1381
AsuII	TTCGAA	1 cut(s)	1509
AvaII	GGWCC	2 cut(s)	967, 1127
AxyI	CCTNAGG	1 cut(s)	1443
BaeI	ACNNNNGTAYC	2 cut(s)	375, 408
BalI	TGGCCA	1 cut(s)	141
BanI	GGYRCC	1 cut(s)	778
BanII	GRGCYC	1 cut(s)	832
BbsI	GAAGAC	2 cut(s)	316, 1170
Bbv12I	GWGCWC	2 cut(s)	832, 1233
BbvI	GCAGC	2 cut(s)	337, 1276
BcgI	CGANNNNNNTGC	2 cut(s)	361, 395
BciT130I	CCWGG	4 cut(s)	765, 1028, 1079, 1195
BcoDI	GTCTC	1 cut(s)	893
BfaI	CTAG	2 cut(s)	912, 1320
BfmI	CTRYAG	4 cut(s)	333, 351, 792, 1270
BfuAI	ACCTGC	1 cut(s)	1400
BisI	GCNGC	2 cut(s)	351, 1290
BlsI	GCNGC	2 cut(s)	352, 1291
Bme1390I	CCNGG	4 cut(s)	765, 1028, 1079, 1195
Bme18I	GGWCC	2 cut(s)	967, 1127
BmgT120I	GGNCC	2 cut(s)	967, 1127
BmiI	GGNNCC	4 cut(s)	780, 968, 1129, 1192
BmrFI	CCNGG	4 cut(s)	765, 1028, 1079, 1195
BmsI	GCATC	3 cut(s)	699, 1094, 1611
BpiI	GAAGAC	2 cut(s)	316, 1170
BplI	GAGNNNNNCTC	2 cut(s)	1577, 1609
BpmI	CTGGAG	1 cut(s)	747
Bpu14I	TTCGAA	1 cut(s)	1509
BpuEI	CTTGAG	1 cut(s)	689
BsaAI	YACGTR	1 cut(s)	74
BsaHI	GRCGYC	1 cut(s)	817
BsaJI	CCNNGG	1 cut(s)	1077
Bsc4I	CCNNNNNNNGG	2 cut(s)	353, 1033
Bse1I	ACTGG	6 cut(s)	32, 782, 1129, 1144, 1526, 1603
Bse21I	CCTNAGG	1 cut(s)	1443
Bse3DI	GCAATG	2 cut(s)	1014, 1468
BseBI	CCWGG	4 cut(s)	765, 1028, 1079, 1195
BseDI	CCNNGG	1 cut(s)	1077
BseGI	GGATG	2 cut(s)	142, 328
BseLI	CCNNNNNNNGG	2 cut(s)	353, 1033
BseMI	GCAATG	2 cut(s)	1014, 1468
BseMII	CTCAG	4 cut(s)	653, 996, 1246, 1434
BseNI	ACTGG	6 cut(s)	32, 782, 1129, 1144, 1526, 1603
BseXI	GCAGC	2 cut(s)	337, 1276
BseYI	CCCAGC	2 cut(s)	602, 1253
BshFI	GGCC	4 cut(s)	141, 521, 1143, 1566
BshNI	GGYRCC	1 cut(s)	778
BsiHKAI	GWGCWC	2 cut(s)	832, 1233
BsiSI	CCGG	2 cut(s)	1140, 1567
BslFI	GGGAC	2 cut(s)	811, 1529
BslI	CCNNNNNNNGG	2 cut(s)	353, 1033
BsmAI	GTCTC	1 cut(s)	893
BsmFI	GGGAC	2 cut(s)	811, 1529
BsnI	GGCC	4 cut(s)	141, 521, 1143, 1566
Bsp119I	TTCGAA	1 cut(s)	1509
Bsp1286I	GDGCHC	2 cut(s)	832, 1233
Bsp143I	GATC	6 cut(s)	42, 511, 592, 663, 1280, 1448
BspACI	CCGC	1 cut(s)	1525
BspANI	GGCC	4 cut(s)	141, 521, 1143, 1566
BspCNI	CTCAG	4 cut(s)	652, 995, 1245, 1435
BspLI	GGNNCC	4 cut(s)	780, 968, 1129, 1192
BspMAI	CTGCAG	1 cut(s)	355
BspMI	ACCTGC	1 cut(s)	1400
BspPI	GGATC	4 cut(s)	37, 519, 1275, 1456
BspT104I	TTCGAA	1 cut(s)	1509
BspT107I	GGYRCC	1 cut(s)	778
BsrDI	GCAATG	2 cut(s)	1014, 1468
BsrI	ACTGG	6 cut(s)	32, 782, 1129, 1144, 1526, 1603
BssECI	CCNNGG	1 cut(s)	1077
BssMI	GATC	6 cut(s)	42, 511, 592, 663, 1280, 1448
BssNI	GRCGYC	1 cut(s)	817
Bst2UI	CCWGG	4 cut(s)	765, 1028, 1079, 1195
Bst4CI	ACNGT	4 cut(s)	133, 376, 1204, 1213
Bst6I	CTCTTC	1 cut(s)	258
BstACI	GRCGYC	1 cut(s)	817
BstAPI	GCANNNNNTGC	1 cut(s)	1472
BstBAI	YACGTR	1 cut(s)	74
BstBI	TTCGAA	1 cut(s)	1509
BstC8I	GCNNGC	4 cut(s)	139, 437, 1306, 1439
BstDEI	CTNAG	6 cut(s)	639, 982, 1232, 1325, 1443, 1487
BstENI	CCTNNNNNAGG	1 cut(s)	351
BstF5I	GGATG	2 cut(s)	142, 328
BstKTI	GATC	6 cut(s)	45, 514, 595, 666, 1283, 1451
BstMAI	GTCTC	1 cut(s)	893
BstMBI	GATC	6 cut(s)	42, 511, 592, 663, 1280, 1448
BstMWI	GCNNNNNNNGC	5 cut(s)	134, 544, 709, 1082, 1472
BstNI	CCWGG	4 cut(s)	765, 1028, 1079, 1195
BstNSI	RCATGY	1 cut(s)	439
BstSCI	CCNGG	4 cut(s)	763, 1026, 1077, 1193
BstSFI	CTRYAG	4 cut(s)	333, 351, 792, 1270
BstSNI	TACGTA	1 cut(s)	74
BstV1I	GCAGC	2 cut(s)	337, 1276
BstV2I	GAAGAC	2 cut(s)	316, 1170
BstX2I	RGATCY	2 cut(s)	42, 1280
BstYI	RGATCY	2 cut(s)	42, 1280
Bsu36I	CCTNAGG	1 cut(s)	1443
BsuRI	GGCC	4 cut(s)	141, 521, 1143, 1566
BtsCI	GGATG	2 cut(s)	142, 328
BtsIMutI	CAGTG	1 cut(s)	1596
BveI	ACCTGC	1 cut(s)	1400
Cac8I	GCNNGC	4 cut(s)	139, 437, 1306, 1439
Cfr13I	GGNCC	2 cut(s)	967, 1127
CseI	GACGC	1 cut(s)	806
Csp6I	GTAC	5 cut(s)	71, 392, 621, 1066, 1147
CviQI	GTAC	5 cut(s)	71, 392, 621, 1066, 1147
DdeI	CTNAG	6 cut(s)	639, 982, 1232, 1325, 1443, 1487
DpnI	GATC	6 cut(s)	44, 513, 594, 665, 1282, 1450
DpnII	GATC	6 cut(s)	42, 511, 592, 663, 1280, 1448
DraI	TTTAAA	1 cut(s)	451
EaeI	YGGCCR	3 cut(s)	139, 1141, 1564
Eam1104I	CTCTTC	1 cut(s)	258
EarI	CTCTTC	1 cut(s)	258
EciI	GGCGGA	1 cut(s)	1540
Ecl136II	GAGCTC	1 cut(s)	830
Eco105I	TACGTA	1 cut(s)	74
Eco24I	GRGCYC	1 cut(s)	832
Eco32I	GATATC	1 cut(s)	988
Eco47I	GGWCC	2 cut(s)	967, 1127
Eco53kI	GAGCTC	1 cut(s)	830
Eco57I	CTGAAG	3 cut(s)	737, 1182, 1578
Eco81I	CCTNAGG	1 cut(s)	1443
EcoICRI	GAGCTC	1 cut(s)	830
EcoNI	CCTNNNNNAGG	1 cut(s)	351
EcoO109I	RGGNCCY	1 cut(s)	967
EcoRI	GAATTC	1 cut(s)	716
EcoRII	CCWGG	4 cut(s)	763, 1026, 1077, 1193
EcoRV	GATATC	1 cut(s)	988
EcoT22I	ATGCAT	1 cut(s)	1468
EcoT38I	GRGCYC	1 cut(s)	832
FaqI	GGGAC	2 cut(s)	811, 1529
Fnu4HI	GCNGC	2 cut(s)	351, 1290
FokI	GGATG	2 cut(s)	129, 315
FriOI	GRGCYC	1 cut(s)	832
Fsp4HI	GCNGC	2 cut(s)	351, 1290
FspBI	CTAG	2 cut(s)	912, 1320
GluI	GCNGC	2 cut(s)	351, 1290
GsaI	CCCAGC	2 cut(s)	606, 1257
GsuI	CTGGAG	1 cut(s)	747
HaeIII	GGCC	4 cut(s)	141, 521, 1143, 1566
HapII	CCGG	2 cut(s)	1140, 1567
HgaI	GACGC	1 cut(s)	806
Hin1I	GRCGYC	1 cut(s)	817
HinfI	GANTC	3 cut(s)	896, 1136, 1454
HpaII	CCGG	2 cut(s)	1140, 1567
HphI	GGTGA	8 cut(s)	474, 627, 680, 712, 883, 891, 988, 1381
Hpy166II	GTNNAC	2 cut(s)	493, 979
Hpy188I	TCNGA	7 cut(s)	51, 411, 642, 663, 985, 1235, 1453
Hpy188III	TCNNGA	6 cut(s)	214, 542, 706, 755, 1000, 1160
Hpy8I	GTNNAC	2 cut(s)	493, 979
HpyAV	CCTTC	5 cut(s)	642, 927, 1113, 1505, 1553
HpyCH4III	ACNGT	4 cut(s)	133, 376, 1204, 1213
HpyCH4IV	ACGT	2 cut(s)	73, 301
HpyCH4V	TGCA	7 cut(s)	353, 382, 737, 1395, 1430, 1466, 1590
HpyF10VI	GCNNNNNNNGC	5 cut(s)	134, 544, 709, 1082, 1472
HpyF3I	CTNAG	6 cut(s)	639, 982, 1232, 1325, 1443, 1487
HpySE526I	ACGT	2 cut(s)	73, 301
Hsp92I	GRCGYC	1 cut(s)	817
Kzo9I	GATC	6 cut(s)	42, 511, 592, 663, 1280, 1448
LmnI	GCTCC	1 cut(s)	827
Lsp1109I	GCAGC	2 cut(s)	337, 1276
LweI	GCATC	3 cut(s)	699, 1094, 1611
MaeI	CTAG	2 cut(s)	912, 1320
MaeII	ACGT	2 cut(s)	73, 301
MaeIII	GTNAC	2 cut(s)	25, 1334
MalI	GATC	6 cut(s)	44, 513, 594, 665, 1282, 1450
MboI	GATC	6 cut(s)	42, 511, 592, 663, 1280, 1448
MboII	GAAGA	7 cut(s)	52, 275, 316, 602, 817, 1175, 1208
MfeI	CAATTG	1 cut(s)	1056
MflI	RGATCY	2 cut(s)	42, 1280
MhlI	GDGCHC	2 cut(s)	832, 1233
MlsI	TGGCCA	1 cut(s)	141
MluNI	TGGCCA	1 cut(s)	141
MmeI	TCCRAC	1 cut(s)	488
Mox20I	TGGCCA	1 cut(s)	141
Mph1103I	ATGCAT	1 cut(s)	1468
MscI	TGGCCA	1 cut(s)	141
MseI	TTAA	6 cut(s)	171, 450, 773, 1245, 1298, 1382
MslI	CAYNNNNRTG	3 cut(s)	374, 1394, 1400
Msp20I	TGGCCA	1 cut(s)	141
MspI	CCGG	2 cut(s)	1140, 1567
MspR9I	CCNGG	4 cut(s)	765, 1028, 1079, 1195
MunI	CAATTG	1 cut(s)	1056
MvaI	CCWGG	4 cut(s)	765, 1028, 1079, 1195
MwoI	GCNNNNNNNGC	5 cut(s)	134, 544, 709, 1082, 1472
NdeII	GATC	6 cut(s)	42, 511, 592, 663, 1280, 1448
NlaIV	GGNNCC	4 cut(s)	780, 968, 1129, 1192
NsiI	ATGCAT	1 cut(s)	1468
NspI	RCATGY	1 cut(s)	439
NspV	TTCGAA	1 cut(s)	1509
OliI	CACNNNNGTG	1 cut(s)	374
PaeI	GCATGC	1 cut(s)	439
PaqCI	CACCTGC	1 cut(s)	1400
PfeI	GAWTC	3 cut(s)	896, 1136, 1454
PfoI	TCCNGGA	2 cut(s)	763, 1026
PkrI	GCNGC	2 cut(s)	352, 1291
Ppu21I	YACGTR	1 cut(s)	74
PpuMI	RGGWCCY	1 cut(s)	967
Psp124BI	GAGCTC	1 cut(s)	832
Psp5II	RGGWCCY	1 cut(s)	967
Psp6I	CCWGG	4 cut(s)	763, 1026, 1077, 1193
PspFI	CCCAGC	2 cut(s)	602, 1253
PspGI	CCWGG	4 cut(s)	763, 1026, 1077, 1193
PspN4I	GGNNCC	4 cut(s)	780, 968, 1129, 1192
PspPI	GGNCC	2 cut(s)	967, 1127
PspPPI	RGGWCCY	1 cut(s)	967
PsrI	GAACNNNNNNTAC	6 cut(s)	44, 76, 1183, 1197, 1215, 1229
PstI	CTGCAG	1 cut(s)	355
PsuI	RGATCY	2 cut(s)	42, 1280
RsaI	GTAC	5 cut(s)	72, 393, 622, 1067, 1148
RsaNI	GTAC	5 cut(s)	71, 392, 621, 1066, 1147
RseI	CAYNNNNRTG	3 cut(s)	374, 1394, 1400
SacI	GAGCTC	1 cut(s)	832
SaqAI	TTAA	6 cut(s)	171, 450, 773, 1245, 1298, 1382
SatI	GCNGC	2 cut(s)	351, 1290
Sau3AI	GATC	6 cut(s)	42, 511, 592, 663, 1280, 1448
Sau96I	GGNCC	2 cut(s)	967, 1127
ScrFI	CCNGG	4 cut(s)	765, 1028, 1079, 1195
SduI	GDGCHC	2 cut(s)	832, 1233
SfaNI	GCATC	3 cut(s)	699, 1094, 1611
SfcI	CTRYAG	4 cut(s)	333, 351, 792, 1270
SfuI	TTCGAA	1 cut(s)	1509
SinI	GGWCC	2 cut(s)	967, 1127
SmiMI	CAYNNNNRTG	3 cut(s)	374, 1394, 1400
SmlI	CTYRAG	1 cut(s)	704
SmoI	CTYRAG	1 cut(s)	704
SnaBI	TACGTA	1 cut(s)	74
SphI	GCATGC	1 cut(s)	439
SsiI	CCGC	1 cut(s)	1525
SspI	AATATT	1 cut(s)	1380
SspMI	CTAG	2 cut(s)	912, 1320
SstI	GAGCTC	1 cut(s)	832
StyD4I	CCNGG	4 cut(s)	763, 1026, 1077, 1193
TaaI	ACNGT	4 cut(s)	133, 376, 1204, 1213
TaiI	ACGT	2 cut(s)	76, 304
TaqI	TCGA	5 cut(s)	786, 832, 1222, 1509, 1605
TatI	WGTACW	2 cut(s)	1065, 1146
TfiI	GAWTC	3 cut(s)	896, 1136, 1454
Tru1I	TTAA	6 cut(s)	171, 450, 773, 1245, 1298, 1382
Tru9I	TTAA	6 cut(s)	171, 450, 773, 1245, 1298, 1382
TscAI	CASTG	1 cut(s)	1603
TseI	GCWGC	2 cut(s)	350, 1289
TspDTI	ATGAA	5 cut(s)	174, 1085, 1418, 1587, 1607
TspRI	CASTG	1 cut(s)	1603
VpaK11BI	GGWCC	2 cut(s)	967, 1127
XagI	CCTNNNNNAGG	1 cut(s)	351
XapI	RAATTY	8 cut(s)	418, 452, 716, 728, 950, 1039, 1172, 1538
XceI	RCATGY	1 cut(s)	439
XspI	CTAG	2 cut(s)	912, 1320
Zsp2I	ATGCAT	1 cut(s)	1468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.