Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0001236

Physical Location & Seq

Genomic Coordinates Forward (+)

52273121 .. 52281101

Gene Structure 7981 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG383200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2658 bp

ATGGAATCGCCGCCGGACAAGTTCATGGCCGATGGCTCGGAGTCGAGGAAGCCAAGGCTGTTCATCAGGGAAATGATTATGAGTAACTTCAAGTCTTACGCCGGTGAACAACGCGTTGGTCCTTTCCACAAGAGCTTTTCTGCTGTTGTTGGACCTAATGGGAGTGGGAAGAGCAACGTCATAGATGCAATGCTCTTTGTATTCGGAAAACGAGCTAAGCAGATGCGACTTAACAGAGTTTCGGAGCTCATTCATAACTCCACTAATTGCCACAATATGGATAGTGCTCGAGTTTCTCTTCATTTCCAGGAGATCATTGATTTGGACGATGGGACGTTTGAAGCTGTTCCAGGAAGTGATTTTGTAATCACTAGGGTAGCGTATCGGGATAACTCCTCCAGGTATTACATCAATGACCGTTCAAGCAATTTTACTCAAGTTACCAAGAAACTGAAAGGGAAAGGAGTTGACCTGGACAACAATCGCTTCTTGATTCTTCAGGGTGAAGTTGAGCAGATCTCACTCATGAAGCCAAAAGCTCAAGGATCTCAGGATGAAAGCCTCCTCGAGTACCTTGAGGACATTATTGGGACCAGCAAATATGTCGAAAAAATTGATGAATCTTATAAAGAGATAGAGTCCCTAAATGAGAAAAGATCTGGTGTCGTGCAAATGGTTAAGCTGGCAGAGAAAGAAAGAGATGGCTTGGAGGATGGGAAGAATGAAGCGGAAGCTTACATGCTGAAAGAGTTGTCCCTTCTAAATTGGCAAGAGAAAGCCACACAATTGGCTTATGAAGATACCTTTGCAAAAATGCTTGATCTGCAGGAAACTATAACCAGCTTAGAAGAAAATCTGAACAATGATAGGGAGAAGATCCAGGAGCGTCATAATGCAGTGAAGGAGCTTGAATCTGTGTACAATAAACATATGAAACAACAAGAGGAATTGTATAATACCCTCAACAGATGTAAGGATGAATTTAAGCATCTTGAAAAGGAGCGTGCAAAATATCTGGTGAATCTGCAATATGTGGAGCAGAAGATCAAGAAACTCGATGAAAAACTTGAAAAGGATTCATTAAAGATTAATGACAGAGAGAGGGAATGTGAGAACTCGACTAATCAGATCCCAGAACTTGAGAAAAGTATTTCCCAACTGCGAAAACTCTTGTTGGATGAAGAAAAAGTCCTGGAGGAAATTATTGAGAATTCCAAAGGGGATACCGAAACATATCGCTGTGAGCTTACAACAGTTCGTTCCAGATTAGAACCTTGGGAAAAACAACTGATTGAGCACCAGAAGAAATTTGATGTTGCATATACTGAACAGAAGCTTTTGGATGAAAAGCATCAAGCTGGTCGTGCAGCTTTTGAAGACGCTCGAAAGCAGATGGATGATATATTGGGAATGACACAAACAAAAACTGCAGACATTGCAAAAATTCGGTGTGAGCTAGAAAAGACCAAATTCGAAAGGACGGAATACTGTAAAGCAGAACAGGCTAAGTTGTCCAACCGGATACCAGGAATACATGGCCGACTGGGTGATTTAGGTGCCATTGATGAGCAATATGATGTTGCCATATCAACAGCTTGCCCTGGACTTGATAATATTTTGGTGGAAACAACTGGTGGAGCAATAGCTTGTGTTGAGCTACTCCGAAGAGAGCATCTTGGTGTTGCTCATTTCATGATAATGGAAAAGATCACTGATTGTTTACCAGTGAGGAAGGAGAATCTAAAGATTAGATCAGGCAGAACGTATTGCATATGGAGGAAACCCCAAATTTCCAGTGTGTCAGAAGAAGCTATTACAGATGCCAGAAGGGGGCTTGCCAGTATGGCTGATAAATTAAACGATATCCGCCAACATATTGCTGATGCAGCAAAGAGATATCAAGCCTCTGAAGATGCAATTGCACACTGGGAGTTGGAATTAGCTAAAAGCGAGAAAGAGATTGACAGTTTGAGTTCACAACATAGTTATCTTGAAAAGCAAATTGGTTCCTTGGAGGCTGCATCACAGCCAAAGAAGGATGAGCTTGATCAGCTAAAAAAACTTGATAGTATCATTTCTGTTGAAGGAAATAAGATCGACGAACTCATCCAAGGATCTAAGCAGCTTAAGGAAAAGGCCCTGGAGCTTCAGCATAAAATAGAAAATGCTGGTGGTGAAAGATTAAAAGTACAGAAGTCAAAGGTCGATAATATTAAGTCCGATATTGATGAAAAGAACACTGAAATCAACCACCACAAAATCCAGATTGAGACTGGCCAGAAAACTATAAAGGAGTTGAGAAAAGTGATTCAAGATTCAAAGAAGAAGAAAGAACGACATGACAAGGAGAAGGAAACGTTATGTGAAAATTTCAAAGAAAAAGAAGAGAAGGCATCTCTAGTTCAAGAGAACTACGAGGAAATACAGAAGCTGATTGATAAACATAAAGACGTGTTGGATAAAGCAAAATCTGAGTTTTGCAATATGAAAAAGACTCTGTATGAATTGCGGGCATGGAAGGATAAAGCTGAGTTTGAACTAGAAGATATGAAGAAGAAATACAAGGATCTGAAATTTGAGGGGAAGGCTTACAAGCCCAGGCTTGATAAGTTGCAAATTGCCCTTATAAAGCATATGGATCAAATTCATAAAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000070 GO:0000278 GO:0000280 GO:0000819 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006323 GO:0006996 GO:0007049 GO:0007059 GO:0007076 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016043 GO:0022402 GO:0022414 GO:0030261 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048285 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051276 GO:0061458 GO:0071103 GO:0071840 GO:0098813 GO:0140014 GO:1903047

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

SMC_N SMC_hinge

Protein Analysis

885

Amino Acids

102.41

Weight (kDa)

6.11

Isoelectric Point (pI)

37.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMC_N	PF02463	21 - 716	3.3e-24	RecF/RecN/SMC N terminal domain
AAA_15	PF13175	22 - 364	5.9e-06	AAA ATPase domain
AAA_29	PF13555	24 - 80	6.8e-06	P-loop containing region of AAA domain
AAA_21	PF13304	46 - 70	6.8e-06	AAA domain, putative AbiEii toxin, Type IV TA system
SMC_hinge	PF06470	509 - 577	2.9e-09	SMC proteins Flexible Hinge Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001236)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48600 AT5G48600
fragaria_vesca	FvH4_2g39941 FvH4_2g39941 FvH4_2g39941 FvH4_2g39941 FvH4_2g39941 FvH4_2g39941 FvH4_4g18080 FvH4_5g30910 FvH4_5g30910 FvH4_5g30910 FvH4_6g23280
malus_domestica	MD02G1198100.v1.1
prunus_persica	Prupe.3G267300_v2.0.a1 Prupe.3G267300_v2.0.a1
pyrus_communis	pycom02g16170
rosa_chinensis	RchiOBHm_Chr5g0008421 RchiOBHm_Chr6g0300801 RchiOBHm_Chr7g0223681 RchiOBHm_Chr7g0223741 RchiOBHm_Chr7g0226461
rosa_laevigata	RLG00000001729 RLG00000011300 RLG00000031570
rosa_multiflora	Rmu_sc0001470.1_g000005 Rmu_sc0001903.1_g000024 Rmu_sc0002826.1_g000022 Rmu_sc0008947.1_g000001
rosa_roxburghii	Rroxscaffold_3G00232810 Rroxscaffold_3G00235410 Rroxscaffold_7G00167400
rosa_rugosa	Rorug06G0299200 Rorug07G0218700 Rorug07G0219100 Rorug07G0219200 Rorug07G0237300
rosa_samantha	Rh6AG412200 Rh6BG419400 Rh6CG426900 Rh6DG412200 Rh7AG362000 Rh7AG384400 Rh7AG384500 Rh7BG353400 Rh7BG353500 Rh7BG371100 Rh7CG380600 Rh7CG403700 Rh7CG403800 Rh7DG356900 Rh7DG357400 Rh7DG383200
rosa_wichuraiana	Rw7G030730 Rw7G030770 Rw7G032280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	627, 2627
AccB1I	GGYRCC	1 cut(s)	1556
AccB7I	CCANNNNNTGG	1 cut(s)	277
AccII	CGCG	1 cut(s)	114
AciI	CCGC	4 cut(s)	11, 728, 1867, 2509
AclI	AACGTT	1 cut(s)	2357
AclWI	GGATC	6 cut(s)	553, 871, 1123, 2122, 2574, 2646
AcoI	YGGCCR	3 cut(s)	27, 1537, 2275
AcsI	RAATTY	9 cut(s)	980, 1210, 1307, 1443, 1469, 1788, 2368, 2573, 2643
AcuI	CTGAAG	3 cut(s)	482, 1929, 2132
AfaI	GTAC	3 cut(s)	572, 920, 2190
AfiI	CCNNNNNNNGG	2 cut(s)	277, 1830
AflII	CTTAAG	1 cut(s)	2126
AflIII	ACRYGT	2 cut(s)	112, 2451
AjiI	CACGTC	1 cut(s)	2452
AjuI	GAANNNNNNNTTGG	4 cut(s)	99, 131, 1986, 2018
Alw21I	GWGCWC	3 cut(s)	249, 289, 1299
Alw26I	GTCTC	1 cut(s)	2264
AlwI	GGATC	6 cut(s)	553, 871, 1123, 2122, 2574, 2646
AlwNI	CAGNNNCTG	1 cut(s)	2431
Ama87I	CYCGRG	2 cut(s)	288, 566
AoxI	GGCC	4 cut(s)	27, 1537, 2136, 2275
ApeKI	GCWGC	4 cut(s)	1367, 1886, 2018, 2122
ApoI	RAATTY	9 cut(s)	980, 1210, 1307, 1443, 1469, 1788, 2368, 2573, 2643
AseI	ATTAAT	1 cut(s)	1089
Asp700I	GAANNNNTTC	1 cut(s)	345
AspS9I	GGNCC	4 cut(s)	119, 152, 591, 2137
AsuHPI	GGTGA	5 cut(s)	116, 515, 1030, 1559, 2186
AsuII	TTCGAA	1 cut(s)	1473
AvaI	CYCGRG	2 cut(s)	288, 566
AvaII	GGWCC	3 cut(s)	119, 152, 591
BalI	TGGCCA	1 cut(s)	2277
BanI	GGYRCC	1 cut(s)	1556
BanII	GRGCYC	1 cut(s)	249
BarI	GAAGNNNNNNTAC	2 cut(s)	2543, 2575
BbsI	GAAGAC	1 cut(s)	1383
Bbv12I	GWGCWC	3 cut(s)	249, 289, 1299
BbvI	GCAGC	4 cut(s)	1379, 1898, 2005, 2134
BccI	CCATC	5 cut(s)	26, 323, 695, 707, 1387
BcgI	CGANNNNNNTGC	2 cut(s)	586, 620
BciVI	GTATCC	2 cut(s)	1216, 1515
BclI	TGATCA	1 cut(s)	2047
BcoDI	GTCTC	1 cut(s)	2264
BfaI	CTAG	4 cut(s)	372, 1457, 2399, 2540
BfmI	CTRYAG	2 cut(s)	824, 1428
BfrI	CTTAAG	1 cut(s)	2126
BfuI	GTATCC	2 cut(s)	1216, 1515
BglI	GCCNNNNNGGC	1 cut(s)	1844
BglII	AGATCT	2 cut(s)	516, 656
BisI	GCNGC	5 cut(s)	11, 1368, 1887, 2019, 2123
BlpI	GCTNAGC	1 cut(s)	216
BlsI	GCNGC	5 cut(s)	12, 1369, 1888, 2020, 2124
Bme18I	GGWCC	3 cut(s)	119, 152, 591
BmeT110I	CYCGRG	2 cut(s)	288, 566
BmgBI	CACGTC	1 cut(s)	2452
BmgT120I	GGNCC	4 cut(s)	119, 152, 591, 2137
BmiI	GGNNCC	3 cut(s)	592, 1558, 2008
BmrI	ACTGGG	2 cut(s)	1553, 1936
BmuI	ACTGGG	2 cut(s)	1553, 1936
BpiI	GAAGAC	1 cut(s)	1383
BplI	GAGNNNNNCTC	2 cut(s)	503, 535
BpmI	CTGGAG	3 cut(s)	382, 1214, 2162
Bpu1102I	GCTNAGC	1 cut(s)	216
Bpu14I	TTCGAA	1 cut(s)	1473
BpuEI	CTTGAG	4 cut(s)	420, 525, 596, 1160
BsaJI	CCNNGG	7 cut(s)	53, 1274, 1600, 2010, 2110, 2139, 2597
BsaWI	WCCGGW	1 cut(s)	1518
Bsc4I	CCNNNNNNNGG	2 cut(s)	277, 1830
Bse118I	RCCGGY	1 cut(s)	101
Bse1I	ACTGG	7 cut(s)	1548, 1636, 1724, 1794, 1839, 1931, 2278
Bse3DI	GCAATG	2 cut(s)	195, 1434
BseDI	CCNNGG	7 cut(s)	53, 1274, 1600, 2010, 2110, 2139, 2597
BseGI	GGATG	8 cut(s)	559, 718, 982, 1183, 1348, 1402, 2044, 2106
BseLI	CCNNNNNNNGG	2 cut(s)	277, 1830
BseMI	GCAATG	2 cut(s)	195, 1434
BseMII	CTCAG	3 cut(s)	563, 2463, 2520
BseNI	ACTGG	7 cut(s)	1548, 1636, 1724, 1794, 1839, 1931, 2278
BseRI	GAGGAG	2 cut(s)	385, 554
BseXI	GCAGC	4 cut(s)	1379, 1898, 2005, 2134
BsgI	GTGCAG	1 cut(s)	1386
Bsh1236I	CGCG	1 cut(s)	114
BshFI	GGCC	4 cut(s)	29, 1539, 2138, 2277
BshNI	GGYRCC	1 cut(s)	1556
BsiHKAI	GWGCWC	3 cut(s)	249, 289, 1299
BsiHKCI	CYCGRG	2 cut(s)	288, 566
BsiSI	CCGG	3 cut(s)	14, 102, 1519
BslFI	GGGAC	4 cut(s)	346, 604, 625, 739
BslI	CCNNNNNNNGG	2 cut(s)	277, 1830
BsmAI	GTCTC	1 cut(s)	2264
BsmFI	GGGAC	4 cut(s)	346, 604, 625, 739
BsnI	GGCC	4 cut(s)	29, 1539, 2138, 2277
BsoBI	CYCGRG	2 cut(s)	288, 566
Bsp119I	TTCGAA	1 cut(s)	1473
Bsp1286I	GDGCHC	3 cut(s)	249, 289, 1299
Bsp1407I	TGTACA	1 cut(s)	918
Bsp1720I	GCTNAGC	1 cut(s)	216
BspACI	CCGC	4 cut(s)	11, 728, 1867, 2509
BspANI	GGCC	4 cut(s)	29, 1539, 2138, 2277
BspCNI	CTCAG	3 cut(s)	562, 2464, 2521
BspFNI	CGCG	1 cut(s)	114
BspHI	TCATGA	2 cut(s)	525, 1692
BspLI	GGNNCC	3 cut(s)	592, 1558, 2008
BspMAI	CTGCAG	2 cut(s)	828, 1432
BspPI	GGATC	6 cut(s)	553, 871, 1123, 2122, 2574, 2646
BspQI	GCTCTTC	1 cut(s)	164
BspT104I	TTCGAA	1 cut(s)	1473
BspT107I	GGYRCC	1 cut(s)	1556
BspTI	CTTAAG	1 cut(s)	2126
BsrDI	GCAATG	2 cut(s)	195, 1434
BsrFI	RCCGGY	1 cut(s)	101
BsrGI	TGTACA	1 cut(s)	918
BsrI	ACTGG	7 cut(s)	1548, 1636, 1724, 1794, 1839, 1931, 2278
BssAI	RCCGGY	1 cut(s)	101
BssECI	CCNNGG	7 cut(s)	53, 1274, 1600, 2010, 2110, 2139, 2597
BssT1I	CCWWGG	4 cut(s)	53, 1274, 2010, 2110
Bst4CI	ACNGT	4 cut(s)	419, 1255, 1490, 1967
Bst6I	CTCTTC	4 cut(s)	164, 303, 1660, 2379
BstAFI	CTTAAG	1 cut(s)	2126
BstAPI	GCANNNNNTGC	1 cut(s)	1436
BstAUI	TGTACA	1 cut(s)	918
BstBI	TTCGAA	1 cut(s)	1473
BstC8I	GCNNGC	5 cut(s)	684, 1005, 1597, 1836, 2511
BstDEI	CTNAG	7 cut(s)	216, 549, 844, 1506, 2118, 2472, 2529
BstF5I	GGATG	8 cut(s)	559, 718, 982, 1183, 1348, 1402, 2044, 2106
BstFNI	CGCG	1 cut(s)	114
BstMAI	GTCTC	1 cut(s)	2264
BstMWI	GCNNNNNNNGC	7 cut(s)	823, 1364, 1436, 1502, 1844, 1886, 2050
BstNSI	RCATGY	1 cut(s)	742
BstSFI	CTRYAG	2 cut(s)	824, 1428
BstUI	CGCG	1 cut(s)	114
BstV1I	GCAGC	4 cut(s)	1379, 1898, 2005, 2134
BstV2I	GAAGAC	1 cut(s)	1383
BstX2I	RGATCY	7 cut(s)	516, 545, 656, 876, 1128, 2114, 2566
BstXI	CCANNNNNNTGG	1 cut(s)	787
BstYI	RGATCY	7 cut(s)	516, 545, 656, 876, 1128, 2114, 2566
BsuI	GTATCC	2 cut(s)	1216, 1515
BsuRI	GGCC	4 cut(s)	29, 1539, 2138, 2277
BtrI	CACGTC	1 cut(s)	2452
BtsCI	GGATG	8 cut(s)	559, 718, 982, 1183, 1348, 1402, 2044, 2106
BtsI	GCAGTG	1 cut(s)	903
BtsIMutI	CAGTG	6 cut(s)	903, 1710, 1731, 1801, 1924, 2238
Cac8I	GCNNGC	5 cut(s)	684, 1005, 1597, 1836, 2511
CaiI	CAGNNNCTG	1 cut(s)	2431
CciI	TCATGA	2 cut(s)	525, 1692
Cfr10I	RCCGGY	1 cut(s)	101
Cfr13I	GGNCC	4 cut(s)	119, 152, 591, 2137
CseI	GACGC	2 cut(s)	875, 1388
Csp6I	GTAC	3 cut(s)	571, 919, 2189
CviAII	CATG	7 cut(s)	25, 526, 739, 1535, 1693, 2339, 2514
CviQI	GTAC	3 cut(s)	571, 919, 2189
DdeI	CTNAG	7 cut(s)	216, 549, 844, 1506, 2118, 2472, 2529
EaeI	YGGCCR	3 cut(s)	27, 1537, 2275
Eam1104I	CTCTTC	4 cut(s)	164, 303, 1660, 2379
EarI	CTCTTC	4 cut(s)	164, 303, 1660, 2379
EciI	GGCGGA	1 cut(s)	1856
Ecl136II	GAGCTC	1 cut(s)	247
Eco130I	CCWWGG	4 cut(s)	53, 1274, 2010, 2110
Eco24I	GRGCYC	1 cut(s)	249
Eco32I	GATATC	2 cut(s)	1864, 1898
Eco47I	GGWCC	3 cut(s)	119, 152, 591
Eco53kI	GAGCTC	1 cut(s)	247
Eco57I	CTGAAG	3 cut(s)	482, 1929, 2132
Eco88I	CYCGRG	2 cut(s)	288, 566
EcoICRI	GAGCTC	1 cut(s)	247
EcoO109I	RGGNCCY	1 cut(s)	2137
EcoRI	GAATTC	1 cut(s)	1210
EcoRV	GATATC	2 cut(s)	1864, 1898
EcoT14I	CCWWGG	4 cut(s)	53, 1274, 2010, 2110
EcoT38I	GRGCYC	1 cut(s)	249
ErhI	CCWWGG	4 cut(s)	53, 1274, 2010, 2110
FaeI	CATG	7 cut(s)	28, 529, 742, 1538, 1696, 2342, 2517
FaqI	GGGAC	4 cut(s)	346, 604, 625, 739
FatI	CATG	7 cut(s)	24, 525, 738, 1534, 1692, 2338, 2513
FauI	CCCGC	1 cut(s)	2502
FauNDI	CATATG	3 cut(s)	930, 1772, 2634
FbaI	TGATCA	1 cut(s)	2047
Fnu4HI	GCNGC	5 cut(s)	11, 1368, 1887, 2019, 2123
FokI	GGATG	8 cut(s)	566, 725, 989, 1190, 1355, 1409, 2051, 2093
FriOI	GRGCYC	1 cut(s)	249
Fsp4HI	GCNGC	5 cut(s)	11, 1368, 1887, 2019, 2123
FspBI	CTAG	4 cut(s)	372, 1457, 2399, 2540
GluI	GCNGC	5 cut(s)	11, 1368, 1887, 2019, 2123
GsuI	CTGGAG	3 cut(s)	382, 1214, 2162
HaeIII	GGCC	4 cut(s)	29, 1539, 2138, 2277
HapII	CCGG	3 cut(s)	14, 102, 1519
HgaI	GACGC	2 cut(s)	875, 1388
Hin1II	CATG	7 cut(s)	28, 529, 742, 1538, 1696, 2342, 2517
HincII	GTYRAC	1 cut(s)	469
HindII	GTYRAC	1 cut(s)	469
HindIII	AAGCTT	2 cut(s)	732, 1334
HpaII	CCGG	3 cut(s)	14, 102, 1519
HphI	GGTGA	5 cut(s)	116, 515, 1030, 1559, 2186
Hpy166II	GTNNAC	5 cut(s)	107, 469, 919, 1721, 1976
Hpy8I	GTNNAC	5 cut(s)	107, 469, 919, 1721, 1976
Hpy99I	CGWCG	1 cut(s)	2102
HpyCH4III	ACNGT	4 cut(s)	419, 1255, 1490, 1967
HpyCH4IV	ACGT	5 cut(s)	177, 335, 1763, 2357, 2451
HpyF10VI	GCNNNNNNNGC	7 cut(s)	823, 1364, 1436, 1502, 1844, 1886, 2050
HpyF3I	CTNAG	7 cut(s)	216, 549, 844, 1506, 2118, 2472, 2529
HpySE526I	ACGT	5 cut(s)	177, 335, 1763, 2357, 2451
Hsp92II	CATG	7 cut(s)	28, 529, 742, 1538, 1696, 2342, 2517
Ksp22I	TGATCA	1 cut(s)	2047
LguI	GCTCTTC	1 cut(s)	164
LmnI	GCTCC	7 cut(s)	244, 883, 904, 1000, 1036, 1637, 2143
Lsp1109I	GCAGC	4 cut(s)	1379, 1898, 2005, 2134
MaeI	CTAG	4 cut(s)	372, 1457, 2399, 2540
MaeII	ACGT	5 cut(s)	177, 335, 1763, 2357, 2451
MaeIII	GTNAC	2 cut(s)	83, 439
MfeI	CAATTG	2 cut(s)	785, 1917
MflI	RGATCY	7 cut(s)	516, 545, 656, 876, 1128, 2114, 2566
MhlI	GDGCHC	3 cut(s)	249, 289, 1299
MlsI	TGGCCA	1 cut(s)	2277
MluI	ACGCGT	1 cut(s)	112
MluNI	TGGCCA	1 cut(s)	2277
MlyI	GAGTC	3 cut(s)	50, 647, 2488
MmeI	TCCRAC	5 cut(s)	130, 1155, 1539, 1914, 2436
Mox20I	TGGCCA	1 cut(s)	2277
MroXI	GAANNNNTTC	1 cut(s)	345
MscI	TGGCCA	1 cut(s)	2277
MslI	CAYNNNNRTG	2 cut(s)	1677, 1697
Msp20I	TGGCCA	1 cut(s)	2277
MspCI	CTTAAG	1 cut(s)	2126
MspI	CCGG	3 cut(s)	14, 102, 1519
MunI	CAATTG	2 cut(s)	785, 1917
MvnI	CGCG	1 cut(s)	114
MwoI	GCNNNNNNNGC	7 cut(s)	823, 1364, 1436, 1502, 1844, 1886, 2050
NdeI	CATATG	3 cut(s)	930, 1772, 2634
NlaIII	CATG	7 cut(s)	28, 529, 742, 1538, 1696, 2342, 2517
NlaIV	GGNNCC	3 cut(s)	592, 1558, 2008
NspI	RCATGY	1 cut(s)	742
NspV	TTCGAA	1 cut(s)	1473
PaeR7I	CTCGAG	2 cut(s)	288, 566
PagI	TCATGA	2 cut(s)	525, 1692
PciSI	GCTCTTC	1 cut(s)	164
PdmI	GAANNNNTTC	1 cut(s)	345
PfeI	GAWTC	9 cut(s)	5, 493, 620, 911, 1021, 1076, 1738, 2308, 2315
PflMI	CCANNNNNTGG	1 cut(s)	277
PfoI	TCCNGGA	4 cut(s)	306, 349, 879, 1191
PkrI	GCNGC	5 cut(s)	12, 1369, 1888, 2020, 2124
PleI	GAGTC	3 cut(s)	49, 646, 2488
PpsI	GAGTC	3 cut(s)	49, 646, 2488
PshBI	ATTAAT	1 cut(s)	1089
PsiI	TTATAA	2 cut(s)	627, 2627
Psp124BI	GAGCTC	1 cut(s)	249
Psp1406I	AACGTT	1 cut(s)	2357
PspN4I	GGNNCC	3 cut(s)	592, 1558, 2008
PspPI	GGNCC	4 cut(s)	119, 152, 591, 2137
PspXI	VCTCGAGB	2 cut(s)	288, 566
PstI	CTGCAG	2 cut(s)	828, 1432
PstNI	CAGNNNCTG	1 cut(s)	2431
PsuI	RGATCY	7 cut(s)	516, 545, 656, 876, 1128, 2114, 2566
RsaI	GTAC	3 cut(s)	572, 920, 2190
RsaNI	GTAC	3 cut(s)	571, 919, 2189
RseI	CAYNNNNRTG	2 cut(s)	1677, 1697
SacI	GAGCTC	1 cut(s)	249
SapI	GCTCTTC	1 cut(s)	164
SatI	GCNGC	5 cut(s)	11, 1368, 1887, 2019, 2123
Sau96I	GGNCC	4 cut(s)	119, 152, 591, 2137
SchI	GAGTC	3 cut(s)	50, 647, 2488
SduI	GDGCHC	3 cut(s)	249, 289, 1299
SfcI	CTRYAG	2 cut(s)	824, 1428
Sfr274I	CTCGAG	2 cut(s)	288, 566
SfuI	TTCGAA	1 cut(s)	1473
SgrAI	CRCCGGYG	1 cut(s)	101
SinI	GGWCC	3 cut(s)	119, 152, 591
SlaI	CTCGAG	2 cut(s)	288, 566
SmiMI	CAYNNNNRTG	2 cut(s)	1677, 1697
SmlI	CTYRAG	7 cut(s)	288, 435, 540, 566, 575, 1139, 2126
SmoI	CTYRAG	7 cut(s)	288, 435, 540, 566, 575, 1139, 2126
SsiI	CCGC	4 cut(s)	11, 728, 1867, 2509
SspI	AATATT	2 cut(s)	1615, 2212
SspMI	CTAG	4 cut(s)	372, 1457, 2399, 2540
SstI	GAGCTC	1 cut(s)	249
StyI	CCWWGG	4 cut(s)	53, 1274, 2010, 2110
TaaI	ACNGT	4 cut(s)	419, 1255, 1490, 1967
TaiI	ACGT	5 cut(s)	180, 338, 1766, 2360, 2454
TatI	WGTACW	2 cut(s)	918, 2188
TauI	GCSGC	1 cut(s)	13
TfiI	GAWTC	9 cut(s)	5, 493, 620, 911, 1021, 1076, 1738, 2308, 2315
TscAI	CASTG	6 cut(s)	903, 1717, 1731, 1801, 1931, 2245
TseI	GCWGC	4 cut(s)	1367, 1886, 2018, 2122
TspGWI	ACGGA	1 cut(s)	1496
TspRI	CASTG	6 cut(s)	903, 1717, 1731, 1801, 1931, 2245
Van91I	CCANNNNNTGG	1 cut(s)	277
Vha464I	CTTAAG	1 cut(s)	2126
VpaK11BI	GGWCC	3 cut(s)	119, 152, 591
VspI	ATTAAT	1 cut(s)	1089
XapI	RAATTY	9 cut(s)	980, 1210, 1307, 1443, 1469, 1788, 2368, 2573, 2643
XceI	RCATGY	1 cut(s)	742
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2270
XhoI	CTCGAG	2 cut(s)	288, 566
XmnI	GAANNNNTTC	1 cut(s)	345
XspI	CTAG	4 cut(s)	372, 1457, 2399, 2540

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.