FvH4_6g08350

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000854
Physical Location & Seq
Forward (+)
4937660 .. 4942394
4735 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g08350.t4

Sequence Viewer

Length: 2406 bp
ATGGATGATAGCTGTGCTGTCTGTGCTGAGACACTTCAATGGGTCGCCTATGGTCCATGTGGCCATCGGGAGGTCTGCTCCACCTGCATTGTTCGCCTCCGTTTCATCTGTGGAGATTCCCATTGCTGTATCTGCAAGAGTGAATCTAAGACCATCTTTGTGACCAAGGCGTTAGGCGACTATACAAGGATGATCAGTGACTTTTCTGCTTTGCCAGCGCCTCTAATGGAGGGTCAACTTGGACCATACTGGTACCATGAAGGAACACAAGCCTATTTTGATGATATTGATCATTACAAGATGATAAAGGCCATGTGCAGGCTATCATGTAGTTTTTGTAATAAGATTAATGAACAAAGGAGTGAAAGGTCGAAGAAAAAAGGGGAATTTAAAAATGTTGAGCAGCTGAAAAATCATTTGTTTCATCGGCATAGGCTGTTCATGTGCAGTCTGTGCCTGGAGGGAAGGAAGATATTTATCTGTGAGCAAAAGTTATATACTAAAGCACAATTGGATCGGCATACAGAGACAGGTGATTCAGAGGTAGATGGCAGTGAGAGTGAAAGAGGTGGGTTTAATGGACACCCTATGTGTGAGTTTTGCAAAAATCCATTTTACGGAGATAATGAGCACTACATGCATATGTCCACCGAGCATTTTACTTGTCATATATGCCAAAGGCAGTGTCCAGGACAGTATAAATACTACAGTAACTATGACAACTTGGAGGATGATGCCTGCCTAACAAAAAAGTTTGTTGTTTTTGCAACTGAATCTGAAATGAAGAGGCATAATGCCAAAGAACATGGAGGGAACATGTCTCGCTCCCGGCGTAGTGCTGCTCTTCAGATACCAGTAAGCTTCCAGTGTAGGAGAAGTAATGAGGAGAATCATCATGGACTGCATGCTGGACGACATGGTTCTGATGTTGATGCTGAAGATAATCAACTTTCCCTGACTGTTCAAGCTAGTGCTGATACAGCCAATGCAGAAAGGTTACGTAATACATCCTCTACTGTCCAAGCAGTTTTTGATCGTCGAGGAGCAAGTGACTCTGGGATTATTGCTAGCCGTTTTGAGTCATTAGCTGCTACAGAAACTGAGTCATCTGTAAGATGCTCTAATGCTTTACGAGAAAATTCACGTAATGTACTGGCAGAAGAATCAGCCTTCCCTCCACTTCCTCTGGCTCAAAGTAGCAGGCAACAGAAATTTAGAAATGGTTCTGAACATATGGATGGTAGCACAATGGCTTCTCGCGTTCGTCGCCTTAATACCGTAAATGTCCTCAATTCTTCTTCAGCTTGGCCAACAGCAAGACGTCAACCTAAATCATCTGCCAGTAGTTCTCACCAGTTATCATCATCTACTTCTCCTGTATTTTCCCAGAGTAATACTTCAACGATTAATAGGACTATGCCTTCCGGATATGCAAGTCCTGGTCCAGAGAGACAAGCTGCAGCTAACGGTTTTGTATCATCGAATTTTCTTAGCACAGGGAAGTCACCTAGAACTAGTAGGGTGGGCCACTCTACTTCAGCTCCAAACCTTGTTGAGAGAGGATCTGTAGACTCTGATTGTCCTTCTGTATCAGCTACTCAAACTAGTAGAGAACCTGCAAGTAGTAGGACAATATTACCCAAGGTTGGAGATGTTCAGACTGCCAACAAGTCCCTTGTAGAAAAAATCCGTGATGCTTTAGAGTTTGATGAGAACAAATTCACCACATTCAAAAAATTATCTGGAAAGTACCGCAAGGATTTAATCAACACGGGGGAATATCTGGCCTGTGTGGACCAGTTTGGCCTGTCACACTTGGTTCTTGAGCTAGCTCAACTGTGTCCTGATGCTGAGAAGCAAAGAGAGCTTGTTGAGACTTACAATTTCAACATGAAGAGCAGCGGTTCTCATGGCAAGTCAAAGAGCAGTTCCAAGAAAGGCAAGGAAAAATGTGTAGATAATGGAACCACTAGTTCGAAAGATGCTTTGAAGTTGAATTGTAAACCTCCTGTTGAAGATGCAGCAGTCGTATTGAAGAATGATCGTCACTCTAGCAAAGGAAAGTTGAAGATAGCACTTGAGGATGAACAGATCAACCTGGATTCTGGAAATCATATGCCGATAGGTCAGAATGGATCTCCGTCGGCTGGTGGCAGCTCAAAGAAATCAGCTAATAAGCAACAAAAGAAGGTTCCCAAGTTTCTTAGAAATCGCCTCGGTGATAATGCTGTAGCACTAGCAGAACTTGGTGATGCTGAAATCGGTCCTGACCTGATTGAAGAAAAAACAGATAGAGACAAGGATCCCCCTGAAGGGTTGCCAGTTCGCGGTGTTTGGCAAAACGGAGGTGGCCGTAGACTCGTGAACATGACCATGAGAAACCGTCTGAAACGTGGAGTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

802

Amino Acids

88.73

Weight (kDa)

8.76

Isoelectric Point (pI)

50.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAH_ZNF598 PF23202 281 - 356 6.1e-22 ZNF598 PAH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 92
AatII GACGTC 1 cut(s) 1324
Acc36I ACCTGC 2 cut(s) 92, 1624
Acc65I GGTACC 1 cut(s) 252
AccB1I GGYRCC 1 cut(s) 252
AccI GTMKAC 2 cut(s) 1569, 2356
AccII CGCG 2 cut(s) 1260, 2328
AccIII TCCGGA 1 cut(s) 1424
AciI CCGC 3 cut(s) 1753, 1902, 2328
AclWI GGATC 5 cut(s) 522, 1570, 2143, 2297, 2310
AcoI YGGCCR 3 cut(s) 61, 1307, 2350
AcsI RAATTY 5 cut(s) 386, 1138, 1211, 1483, 1718
AcuI CTGAAG 5 cut(s) 830, 957, 1284, 1521, 2331
AcyI GRCGYC 1 cut(s) 1321
AfaI GTAC 3 cut(s) 254, 1152, 1751
AfiI CCNNNNNNNGG 8 cut(s) 70, 318, 617, 1646, 2147, 2312, 2313, 2327
AflIII ACRYGT 1 cut(s) 816
AhlI ACTAGT 3 cut(s) 1514, 1604, 1970
AjnI CCWGG 4 cut(s) 456, 688, 1438, 2097
Alw21I GWGCWC 1 cut(s) 633
Alw26I GTCTC 6 cut(s) 23, 521, 825, 1444, 1868, 2289
AlwI GGATC 5 cut(s) 522, 1570, 2143, 2297, 2310
AlwNI CAGNNNCTG 1 cut(s) 1100
Aor13HI TCCGGA 1 cut(s) 1424
AoxI GGCC 7 cut(s) 61, 309, 1307, 1525, 1785, 1804, 2350
ApeKI GCWGC 8 cut(s) 403, 839, 1088, 1457, 1460, 1899, 2021, 2154
ApoI RAATTY 5 cut(s) 386, 1138, 1211, 1483, 1718
ArsI GACNNNNNNTTYG 2 cut(s) 670, 702
AseI ATTAAT 2 cut(s) 348, 1407
Asp700I GAANNNNTTC 2 cut(s) 1222, 1718
Asp718I GGTACC 1 cut(s) 252
AspLEI GCGC 1 cut(s) 220
AspS9I GGNCC 6 cut(s) 53, 242, 1442, 1525, 1795, 2264
AsuC2I CCSGG 1 cut(s) 829
AsuHPI GGTGA 6 cut(s) 545, 1343, 1497, 1714, 2231, 2261
AsuII TTCGAA 1 cut(s) 1976
AsuNHI GCTAGC 2 cut(s) 1067, 1828
AvaII GGWCC 5 cut(s) 53, 242, 1442, 1795, 2264
BalI TGGCCA 2 cut(s) 63, 1309
BamHI GGATCC 1 cut(s) 2302
BanI GGYRCC 1 cut(s) 252
BauI CACGAG 1 cut(s) 2360
Bbv12I GWGCWC 1 cut(s) 633
BbvI GCAGC 8 cut(s) 415, 826, 1075, 1444, 1472, 1911, 2033, 2166
BccI CCATC 4 cut(s) 72, 161, 542, 1232
BceAI ACGGC 2 cut(s) 1056, 2337
BciT130I CCWGG 4 cut(s) 458, 690, 1440, 2099
BclI TGATCA 2 cut(s) 192, 289
BcnI CCSGG 1 cut(s) 829
BcoDI GTCTC 6 cut(s) 23, 521, 825, 1444, 1868, 2289
BcuI ACTAGT 3 cut(s) 1514, 1604, 1970
BfaI CTAG 9 cut(s) 969, 1068, 1509, 1515, 1605, 1829, 1971, 2052, 2237
BfmI CTRYAG 5 cut(s) 706, 1092, 1458, 1566, 2229
BfoI RGCGCY 1 cut(s) 221
BfuAI ACCTGC 2 cut(s) 92, 1624
BisI GCNGC 8 cut(s) 404, 840, 1089, 1458, 1461, 1900, 2022, 2155
BlsI GCNGC 8 cut(s) 405, 841, 1090, 1459, 1462, 1901, 2023, 2156
Bme1390I CCNGG 5 cut(s) 458, 690, 829, 1440, 2099
Bme18I GGWCC 5 cut(s) 53, 242, 1442, 1795, 2264
BmgT120I GGNCC 6 cut(s) 53, 242, 1442, 1525, 1795, 2264
BmiI GGNNCC 4 cut(s) 254, 1966, 2193, 2304
BmrFI CCNGG 5 cut(s) 458, 690, 829, 1440, 2099
BmsI GCATC 8 cut(s) 724, 922, 1106, 1684, 1837, 1972, 2008, 2242
BmtI GCTAGC 2 cut(s) 1071, 1832
BplI GAGNNNNNCTC 2 cut(s) 62, 94
BpmI CTGGAG 1 cut(s) 479
Bpu14I TTCGAA 1 cut(s) 1976
BpuEI CTTGAG 2 cut(s) 1844, 2099
BpuMI CCSGG 1 cut(s) 829
BsaAI YACGTR 2 cut(s) 1001, 1145
BsaBI GATNNNNATC 2 cut(s) 288, 476
BsaHI GRCGYC 1 cut(s) 1321
BsaJI CCNNGG 3 cut(s) 165, 1641, 2215
BsaWI WCCGGW 1 cut(s) 1424
BsaXI ACNNNNNCTCC 2 cut(s) 1525, 1555
Bsc4I CCNNNNNNNGG 8 cut(s) 70, 318, 617, 1646, 2147, 2312, 2313, 2327
Bse1I ACTGG 8 cut(s) 254, 854, 865, 1158, 1341, 1354, 1798, 2321
Bse3DI GCAATG 1 cut(s) 121
Bse8I GATNNNNATC 2 cut(s) 288, 476
BseAI TCCGGA 1 cut(s) 1424
BseBI CCWGG 4 cut(s) 458, 690, 1440, 2099
BseDI CCNNGG 3 cut(s) 165, 1641, 2215
BseGI GGATG 6 cut(s) 10, 195, 736, 1007, 1243, 2089
BseJI GATNNNNATC 2 cut(s) 288, 476
BseLI CCNNNNNNNGG 8 cut(s) 70, 318, 617, 1646, 2147, 2312, 2313, 2327
BseMI GCAATG 1 cut(s) 121
BseMII CTCAG 3 cut(s) 18, 1092, 1842
BseNI ACTGG 8 cut(s) 254, 854, 865, 1158, 1341, 1354, 1798, 2321
BseRI GAGGAG 2 cut(s) 899, 1056
BseXI GCAGC 8 cut(s) 415, 826, 1075, 1444, 1472, 1911, 2033, 2166
BsgI GTGCAG 2 cut(s) 337, 466
Bsh1236I CGCG 2 cut(s) 1260, 2328
BshFI GGCC 7 cut(s) 63, 311, 1309, 1527, 1787, 1806, 2352
BshNI GGYRCC 1 cut(s) 252
BsiHKAI GWGCWC 1 cut(s) 633
BsiSI CCGG 2 cut(s) 829, 1425
BslFI GGGAC 1 cut(s) 1657
BslI CCNNNNNNNGG 8 cut(s) 70, 318, 617, 1646, 2147, 2312, 2313, 2327
BsmAI GTCTC 6 cut(s) 23, 521, 825, 1444, 1868, 2289
BsmFI GGGAC 1 cut(s) 1657
BsnI GGCC 7 cut(s) 63, 311, 1309, 1527, 1787, 1806, 2352
Bsp119I TTCGAA 1 cut(s) 1976
Bsp1286I GDGCHC 1 cut(s) 633
Bsp13I TCCGGA 1 cut(s) 1424
Bsp143I GATC 9 cut(s) 192, 289, 514, 1033, 1562, 2041, 2091, 2135, 2302
BspACI CCGC 3 cut(s) 1753, 1902, 2328
BspANI GGCC 7 cut(s) 63, 311, 1309, 1527, 1787, 1806, 2352
BspCNI CTCAG 3 cut(s) 19, 1093, 1843
BspEI TCCGGA 1 cut(s) 1424
BspFNI CGCG 2 cut(s) 1260, 2328
BspLI GGNNCC 4 cut(s) 254, 1966, 2193, 2304
BspMAI CTGCAG 1 cut(s) 1462
BspMI ACCTGC 2 cut(s) 92, 1624
BspOI GCTAGC 2 cut(s) 1071, 1832
BspPI GGATC 5 cut(s) 522, 1570, 2143, 2297, 2310
BspQI GCTCTTC 2 cut(s) 849, 1889
BspT104I TTCGAA 1 cut(s) 1976
BspT107I GGYRCC 1 cut(s) 252
BsrDI GCAATG 1 cut(s) 121
BsrI ACTGG 8 cut(s) 254, 854, 865, 1158, 1341, 1354, 1798, 2321
BssECI CCNNGG 3 cut(s) 165, 1641, 2215
BssMI GATC 9 cut(s) 192, 289, 514, 1033, 1562, 2041, 2091, 2135, 2302
BssNI GRCGYC 1 cut(s) 1321
BssSI CACGAG 1 cut(s) 2360
BssT1I CCWWGG 2 cut(s) 165, 1641
Bst2BI CACGAG 1 cut(s) 2360
Bst2UI CCWGG 4 cut(s) 458, 690, 1440, 2099
Bst4CI ACNGT 8 cut(s) 696, 710, 961, 1018, 1279, 1469, 1839, 2384
Bst6I CTCTTC 3 cut(s) 779, 849, 1889
BstACI GRCGYC 1 cut(s) 1321
BstAPI GCANNNNNTGC 2 cut(s) 453, 637
BstBAI YACGTR 2 cut(s) 1001, 1145
BstBI TTCGAA 1 cut(s) 1976
BstC8I GCNNGC 7 cut(s) 216, 320, 739, 906, 1069, 1202, 1830
BstDEI CTNAG 6 cut(s) 27, 147, 1101, 1490, 1851, 2204
BstF5I GGATG 6 cut(s) 10, 195, 736, 1007, 1243, 2089
BstFNI CGCG 2 cut(s) 1260, 2328
BstH2I RGCGCY 1 cut(s) 221
BstHHI GCGC 1 cut(s) 220
BstKTI GATC 9 cut(s) 195, 292, 517, 1036, 1565, 2044, 2094, 2138, 2305
BstMAI GTCTC 6 cut(s) 23, 521, 825, 1444, 1868, 2289
BstMBI GATC 9 cut(s) 192, 289, 514, 1033, 1562, 2041, 2091, 2135, 2302
BstNI CCWGG 4 cut(s) 458, 690, 1440, 2099
BstNSI RCATGY 3 cut(s) 640, 820, 908
BstSCI CCNGG 5 cut(s) 456, 688, 827, 1438, 2097
BstSFI CTRYAG 5 cut(s) 706, 1092, 1458, 1566, 2229
BstSNI TACGTA 1 cut(s) 1001
BstUI CGCG 2 cut(s) 1260, 2328
BstV1I GCAGC 8 cut(s) 415, 826, 1075, 1444, 1472, 1911, 2033, 2166
BstX2I RGATCY 3 cut(s) 1562, 2135, 2302
BstYI RGATCY 3 cut(s) 1562, 2135, 2302
BsuRI GGCC 7 cut(s) 63, 311, 1309, 1527, 1787, 1806, 2352
BtsCI GGATG 6 cut(s) 10, 195, 736, 1007, 1243, 2089
BtsI GCAGTG 2 cut(s) 559, 689
BtsIMutI CAGTG 4 cut(s) 202, 559, 689, 872
BveI ACCTGC 2 cut(s) 92, 1624
Cac8I GCNNGC 7 cut(s) 216, 320, 739, 906, 1069, 1202, 1830
CaiI CAGNNNCTG 1 cut(s) 1100
CfoI GCGC 1 cut(s) 220
Cfr13I GGNCC 6 cut(s) 53, 242, 1442, 1525, 1795, 2264
Csp6I GTAC 3 cut(s) 253, 1151, 1750
CspCI CAANNNNNGTGG 2 cut(s) 70, 105
CviQI GTAC 3 cut(s) 253, 1151, 1750
DdeI CTNAG 6 cut(s) 27, 147, 1101, 1490, 1851, 2204
DpnI GATC 9 cut(s) 194, 291, 516, 1035, 1564, 2043, 2093, 2137, 2304
DpnII GATC 9 cut(s) 192, 289, 514, 1033, 1562, 2041, 2091, 2135, 2302
DraI TTTAAA 1 cut(s) 391
EaeI YGGCCR 3 cut(s) 61, 1307, 2350
Eam1104I CTCTTC 3 cut(s) 779, 849, 1889
EarI CTCTTC 3 cut(s) 779, 849, 1889
Eco105I TACGTA 1 cut(s) 1001
Eco130I CCWWGG 2 cut(s) 165, 1641
Eco47I GGWCC 5 cut(s) 53, 242, 1442, 1795, 2264
Eco57I CTGAAG 5 cut(s) 830, 957, 1284, 1521, 2331
EcoRII CCWGG 4 cut(s) 456, 688, 1438, 2097
EcoT14I CCWWGG 2 cut(s) 165, 1641
EcoT22I ATGCAT 1 cut(s) 642
ErhI CCWWGG 2 cut(s) 165, 1641
FalI AAGNNNNNCTT 2 cut(s) 140, 172
FaqI GGGAC 1 cut(s) 1657
FauNDI CATATG 3 cut(s) 642, 1233, 2115
FbaI TGATCA 2 cut(s) 192, 289
FblI GTMKAC 2 cut(s) 1569, 2356
Fnu4HI GCNGC 8 cut(s) 404, 840, 1089, 1458, 1461, 1900, 2022, 2155
FokI GGATG 6 cut(s) 17, 202, 743, 994, 1250, 2096
Fsp4HI GCNGC 8 cut(s) 404, 840, 1089, 1458, 1461, 1900, 2022, 2155
FspBI CTAG 9 cut(s) 969, 1068, 1509, 1515, 1605, 1829, 1971, 2052, 2237
GlaI GCGC 1 cut(s) 219
GluI GCNGC 8 cut(s) 404, 840, 1089, 1458, 1461, 1900, 2022, 2155
GsuI CTGGAG 1 cut(s) 479
HaeII RGCGCY 1 cut(s) 221
HaeIII GGCC 7 cut(s) 63, 311, 1309, 1527, 1787, 1806, 2352
HapII CCGG 2 cut(s) 829, 1425
HhaI GCGC 1 cut(s) 220
Hin1I GRCGYC 1 cut(s) 1321
Hin6I GCGC 1 cut(s) 218
HinP1I GCGC 1 cut(s) 218
HincII GTYRAC 2 cut(s) 236, 1325
HindII GTYRAC 2 cut(s) 236, 1325
HindIII AAGCTT 1 cut(s) 859
HpaII CCGG 2 cut(s) 829, 1425
HphI GGTGA 6 cut(s) 545, 1343, 1497, 1714, 2231, 2261
Hpy166II GTNNAC 8 cut(s) 236, 648, 1325, 1570, 1795, 2003, 2357, 2365
Hpy188III TCNNGA 9 cut(s) 68, 1425, 1445, 1743, 1823, 1844, 2106, 2267, 2362
Hpy8I GTNNAC 8 cut(s) 236, 648, 1325, 1570, 1795, 2003, 2357, 2365
Hpy99I CGWCG 3 cut(s) 1041, 1269, 2146
HpyAV CCTTC 7 cut(s) 254, 459, 1180, 1431, 1593, 2182, 2306
HpyCH4III ACNGT 8 cut(s) 696, 710, 961, 1018, 1279, 1469, 1839, 2384
HpyCH4IV ACGT 4 cut(s) 1000, 1144, 1321, 2392
HpyF3I CTNAG 6 cut(s) 27, 147, 1101, 1490, 1851, 2204
HpySE526I ACGT 4 cut(s) 1000, 1144, 1321, 2392
Hsp92I GRCGYC 1 cut(s) 1321
HspAI GCGC 1 cut(s) 218
Kpn2I TCCGGA 1 cut(s) 1424
KpnI GGTACC 1 cut(s) 256
Ksp22I TGATCA 2 cut(s) 192, 289
Kzo9I GATC 9 cut(s) 192, 289, 514, 1033, 1562, 2041, 2091, 2135, 2302
LguI GCTCTTC 2 cut(s) 849, 1889
LmnI GCTCC 4 cut(s) 83, 830, 1043, 1546
Lsp1109I GCAGC 8 cut(s) 415, 826, 1075, 1444, 1472, 1911, 2033, 2166
LweI GCATC 8 cut(s) 724, 922, 1106, 1684, 1837, 1972, 2008, 2242
MaeI CTAG 9 cut(s) 969, 1068, 1509, 1515, 1605, 1829, 1971, 2052, 2237
MaeII ACGT 4 cut(s) 1000, 1144, 1321, 2392
MaeIII GTNAC 8 cut(s) 160, 197, 710, 996, 1049, 1503, 1809, 2045
MalI GATC 9 cut(s) 194, 291, 516, 1035, 1564, 2043, 2093, 2137, 2304
MboI GATC 9 cut(s) 192, 289, 514, 1033, 1562, 2041, 2091, 2135, 2302
MfeI CAATTG 1 cut(s) 509
MflI RGATCY 3 cut(s) 1562, 2135, 2302
MhlI GDGCHC 1 cut(s) 633
MlsI TGGCCA 2 cut(s) 63, 1309
MluNI TGGCCA 2 cut(s) 63, 1309
MlyI GAGTC 5 cut(s) 1046, 1088, 1112, 1565, 2352
MmeI TCCRAC 1 cut(s) 1627
Mox20I TGGCCA 2 cut(s) 63, 1309
Mph1103I ATGCAT 1 cut(s) 642
MroI TCCGGA 1 cut(s) 1424
MroXI GAANNNNTTC 2 cut(s) 1222, 1718
MscI TGGCCA 2 cut(s) 63, 1309
MseI TTAA 6 cut(s) 348, 390, 576, 1272, 1407, 1763
MslI CAYNNNNRTG 5 cut(s) 37, 158, 641, 1236, 2372
Msp20I TGGCCA 2 cut(s) 63, 1309
MspA1I CMGCKG 2 cut(s) 406, 1902
MspI CCGG 2 cut(s) 829, 1425
MspR9I CCNGG 5 cut(s) 458, 690, 829, 1440, 2099
MunI CAATTG 1 cut(s) 509
MvaI CCWGG 4 cut(s) 458, 690, 1440, 2099
MvnI CGCG 2 cut(s) 1260, 2328
NciI CCSGG 1 cut(s) 829
NdeI CATATG 3 cut(s) 642, 1233, 2115
NdeII GATC 9 cut(s) 192, 289, 514, 1033, 1562, 2041, 2091, 2135, 2302
NheI GCTAGC 2 cut(s) 1067, 1828
NlaIV GGNNCC 4 cut(s) 254, 1966, 2193, 2304
NmuCI GTSAC 6 cut(s) 160, 197, 1049, 1503, 1809, 2045
NsiI ATGCAT 1 cut(s) 642
NspI RCATGY 3 cut(s) 640, 820, 908
NspV TTCGAA 1 cut(s) 1976
PaeI GCATGC 1 cut(s) 908
PaqCI CACCTGC 1 cut(s) 92
PciI ACATGT 1 cut(s) 816
PciSI GCTCTTC 2 cut(s) 849, 1889
PcsI WCGNNNNNNNCGW 1 cut(s) 829
PdmI GAANNNNTTC 2 cut(s) 1222, 1718
PfeI GAWTC 7 cut(s) 116, 143, 536, 773, 889, 1163, 2102
PfoI TCCNGGA 1 cut(s) 688
PkrI GCNGC 8 cut(s) 405, 841, 1090, 1459, 1462, 1901, 2023, 2156
PleI GAGTC 5 cut(s) 1046, 1087, 1111, 1565, 2352
PpsI GAGTC 5 cut(s) 1046, 1087, 1111, 1565, 2352
Ppu21I YACGTR 2 cut(s) 1001, 1145
PscI ACATGT 1 cut(s) 816
PshBI ATTAAT 2 cut(s) 348, 1407
Psp6I CCWGG 4 cut(s) 456, 688, 1438, 2097
PspGI CCWGG 4 cut(s) 456, 688, 1438, 2097
PspN4I GGNNCC 4 cut(s) 254, 1966, 2193, 2304
PspPI GGNCC 6 cut(s) 53, 242, 1442, 1525, 1795, 2264
PstI CTGCAG 1 cut(s) 1462
PstNI CAGNNNCTG 1 cut(s) 1100
PsuI RGATCY 3 cut(s) 1562, 2135, 2302
PvuII CAGCTG 1 cut(s) 406
RsaI GTAC 3 cut(s) 254, 1152, 1751
RsaNI GTAC 3 cut(s) 253, 1151, 1750
RseI CAYNNNNRTG 5 cut(s) 37, 158, 641, 1236, 2372
SapI GCTCTTC 2 cut(s) 849, 1889
SaqAI TTAA 6 cut(s) 348, 390, 576, 1272, 1407, 1763
SatI GCNGC 8 cut(s) 404, 840, 1089, 1458, 1461, 1900, 2022, 2155
Sau3AI GATC 9 cut(s) 192, 289, 514, 1033, 1562, 2041, 2091, 2135, 2302
Sau96I GGNCC 6 cut(s) 53, 242, 1442, 1525, 1795, 2264
SchI GAGTC 5 cut(s) 1046, 1088, 1112, 1565, 2352
ScrFI CCNGG 5 cut(s) 458, 690, 829, 1440, 2099
SduI GDGCHC 1 cut(s) 633
SfaNI GCATC 8 cut(s) 724, 922, 1106, 1684, 1837, 1972, 2008, 2242
SfcI CTRYAG 5 cut(s) 706, 1092, 1458, 1566, 2229
SfuI TTCGAA 1 cut(s) 1976
SinI GGWCC 5 cut(s) 53, 242, 1442, 1795, 2264
SmiMI CAYNNNNRTG 5 cut(s) 37, 158, 641, 1236, 2372
SmlI CTYRAG 2 cut(s) 1823, 2078
SmoI CTYRAG 2 cut(s) 1823, 2078
SnaBI TACGTA 1 cut(s) 1001
SpeI ACTAGT 3 cut(s) 1514, 1604, 1970
SphI GCATGC 1 cut(s) 908
SsiI CCGC 3 cut(s) 1753, 1902, 2328
SspI AATATT 1 cut(s) 1635
SspMI CTAG 9 cut(s) 969, 1068, 1509, 1515, 1605, 1829, 1971, 2052, 2237
StyD4I CCNGG 5 cut(s) 456, 688, 827, 1438, 2097
StyI CCWWGG 2 cut(s) 165, 1641
TaaI ACNGT 8 cut(s) 696, 710, 961, 1018, 1279, 1469, 1839, 2384
TaiI ACGT 4 cut(s) 1003, 1147, 1324, 2395
TaqI TCGA 4 cut(s) 371, 1039, 1481, 1976
TaqII GACCGA 1 cut(s) 2252
TatI WGTACW 1 cut(s) 1150
TfiI GAWTC 7 cut(s) 116, 143, 536, 773, 889, 1163, 2102
Tru1I TTAA 6 cut(s) 348, 390, 576, 1272, 1407, 1763
Tru9I TTAA 6 cut(s) 348, 390, 576, 1272, 1407, 1763
TscAI CASTG 4 cut(s) 202, 559, 689, 872
TseFI GTSAC 6 cut(s) 160, 197, 1049, 1503, 1809, 2045
TseI GCWGC 8 cut(s) 403, 839, 1088, 1457, 1460, 1899, 2021, 2154
Tsp45I GTSAC 6 cut(s) 160, 197, 1049, 1503, 1809, 2045
TspDTI ATGAA 8 cut(s) 94, 273, 366, 413, 430, 797, 1907, 2100
TspGWI ACGGA 5 cut(s) 89, 633, 1679, 2130, 2358
TspRI CASTG 4 cut(s) 202, 559, 689, 872
VpaK11BI GGWCC 5 cut(s) 53, 242, 1442, 1795, 2264
VspI ATTAAT 2 cut(s) 348, 1407
XapI RAATTY 5 cut(s) 386, 1138, 1211, 1483, 1718
XceI RCATGY 3 cut(s) 640, 820, 908
XmiI GTMKAC 2 cut(s) 1569, 2356
XmnI GAANNNNTTC 2 cut(s) 1222, 1718
XspI CTAG 9 cut(s) 969, 1068, 1509, 1515, 1605, 1829, 1971, 2052, 2237
ZraI GACGTC 1 cut(s) 1322
Zsp2I ATGCAT 1 cut(s) 642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.