Rmu_sc0003315.1_g000001

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003315.1
OG0000854
Physical Location & Seq
Forward (+)
1 .. 2692
2692 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003315.1_g000001.1.cds

Sequence Viewer

Length: 2220 bp
gtatttatttgtgaacaaaaactatatagtaaagcacagttgaagcagcatataggtacaggtgactctgaagttgatggaagtgaaagtgaaagagggggctttatggggcatcctatgtgtgaattctgcagaactccattctatggcgataatgaactatacgcccacatgggtaccgagcactacaaatgtcatttatgccatagtcctggacaatatgaatattataggaactatgatgatctcgagatgcacttccgccaaggccatttcctatgtgaagatgagtcatgtcttgccaaaaagtttattgtcttccaatctgaggcagaaatgaagaggcacaatactattgaacatggggggcgtatgtctcgttccaagcgtaatgctgctctccagataccaactagctttcgatatcaacgaggtagtgaacaagataataggcgtggaagaggtcggtcatttcgtcgtgaatctcgtgattcttctgataatcaactttctatggcgattcaagcaagtttggaggcatctactgcagatgatagcacattccatggtccttcctcgtccactgggcatgctgcttcagatcttggagatacaagtgatattgatccaatcattaattcatttgaatccttaagtacaacagatgctgaagcatcctcaaggtaccttcaagccttggggcaaagttctgggaaggcgcctttgcaggactcttcctttcctcccctcgcacctggaagcagtcaatcaacacctatctcggatggtttacctaataacaccatggcagcacatctccgccgtcaaaacaatcgcaaggtggctgttaggcctgttattagttctggtcaggcctggccagcagcagggcgtgtacctgtagtaccgcctactagttcagctcaggcgtggcctacagcacaggtttcacctttaatatcacgtggttctggtcagaacaagatggcctttgggactagaccaggaccttccagttatgcaaattctgctcaggcccaagttgagactcgacagacaacagttcctggattctcatcatctggttcttcacgggattcattcaacaccaactctgctaggattagccattctgcatctgcccctaatttggtcgagaatggatctgttaaacctaccatctccgatttccctccagtttctgcagcacaagtacgtaaggtgccctcaattagtcagccaactagtcagccaactagtcagcctgtattgaaagtggatgttcaaactgctaacaagtccttggtggaaaagattcgtgctgccgttgagtttgacgaagaaaaatacagtctttttaaggagatatctgggcagtatcgtcagggtttagttgacacagaagtatatttagattttgttcgccagtatggcttgttgcatcttgtccttgacttggctagactctgccctgatgctcagaagcagagagagctgattgatgcctacaataagagtgtacgaaacaatggtgcacaagagaatggatggtctcagggaagtgtccgattgaaagattctaagaaaggtaaagggaagagttcagaaacggaaaacagtaaggctaaagggaagagtcatgaagtggaaaacagtagttcaaaggacacactagcagatagcataattaattctgtaagggaacttcaatcaaacaacaggccttcagaagaagcggttgaggtgttgtcgaaggatggctaccgtgctgccaaaggcaaatcaaagctgatagttaatgaacgccaggaggaattgaattctcgcaatcaagccttaacggagccgaggagccaaaaggattcggtgccagctgttagtggatctaatccacatctaggagatggtggtggaggaagcaagcagcggaagaaaacctcaaaattccatagagttcgcttgggtgatggctctgctgcatctctcttggatcttagaaattctgatcctcagccagatgacgggggtgaacaattagatgagagcagtaactcagccggagggttgcctgtccatggtgtttggagacacaaagccgccaataaacacctaataacaccatggcagcacatctccgccgtcaaaacaatcgcaaggtggctgttaggcctgttattagttccggtcaggcctggccagcagcagggcgtgtacctgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

739

Amino Acids

80.72

Weight (kDa)

8.84

Isoelectric Point (pI)

54.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 176, 684
AccB1I GGYRCC 5 cut(s) 176, 684, 718, 1222, 1867
AccB7I CCANNNNNTGG 1 cut(s) 146
AciI CCGC 7 cut(s) 262, 820, 908, 1736, 1927, 2097, 2136
AclWI GGATC 5 cut(s) 620, 1171, 1891, 1998, 2000
AcoI YGGCCR 2 cut(s) 878, 2194
AcsI RAATTY 5 cut(s) 125, 1024, 1819, 1943, 1999
AcuI CTGAAG 4 cut(s) 90, 582, 690, 1710
AcvI CACGTG 1 cut(s) 965
AcyI GRCGYC 1 cut(s) 719
AfaI GTAC 9 cut(s) 58, 178, 658, 686, 897, 906, 1215, 1521, 2213
AfiI CCNNNNNNNGG 9 cut(s) 146, 328, 887, 1150, 1456, 1898, 2021, 2075, 2203
AflII CTTAAG 1 cut(s) 652
AhlI ACTAGT 3 cut(s) 914, 1244, 1256
AjnI CCWGG 7 cut(s) 211, 754, 875, 1003, 1066, 1806, 2191
AjuI GAANNNNNNNTTGG 2 cut(s) 622, 654
AluBI AGCT 5 cut(s) 417, 923, 1495, 1789, 1874
AluI AGCT 5 cut(s) 417, 923, 1495, 1789, 1874
Alw21I GWGCWC 2 cut(s) 186, 1537
Alw26I GTCTC 4 cut(s) 381, 1040, 1557, 2080
Alw44I GTGCAC 1 cut(s) 1533
AlwI GGATC 5 cut(s) 620, 1171, 1891, 1998, 2000
AlwNI CAGNNNCTG 3 cut(s) 668, 1067, 1202
Ama87I CYCGRG 1 cut(s) 248
ApaLI GTGCAC 1 cut(s) 1533
ApoI RAATTY 5 cut(s) 125, 1024, 1819, 1943, 1999
AseI ATTAAT 2 cut(s) 636, 1689
Asp700I GAANNNNTTC 1 cut(s) 1314
Asp718I GGTACC 2 cut(s) 176, 684
AspLEI GCGC 1 cut(s) 721
AspS9I GGNCC 3 cut(s) 569, 1007, 1036
AsuHPI GGTGA 4 cut(s) 74, 942, 1976, 2039
AvaI CYCGRG 1 cut(s) 248
AvaII GGWCC 2 cut(s) 569, 1007
BaeGI GKGCMC 2 cut(s) 1227, 1537
BaeI ACNNNNGTAYC 2 cut(s) 160, 193
BalI TGGCCA 2 cut(s) 880, 2196
BanI GGYRCC 5 cut(s) 176, 684, 718, 1222, 1867
BarI GAAGNNNNNNTAC 4 cut(s) 1689, 1721, 1745, 1777
BauI CACGAG 1 cut(s) 486
BbrPI CACGTG 1 cut(s) 965
BbsI GAAGAC 1 cut(s) 310
Bbv12I GWGCWC 2 cut(s) 186, 1537
BbvCI CCTCAGC 1 cut(s) 2010
BccI CCATC 8 cut(s) 71, 779, 979, 1187, 1542, 1751, 1898, 1961
BceAI ACGGC 3 cut(s) 807, 1310, 2123
BciT130I CCWGG 7 cut(s) 213, 756, 877, 1005, 1068, 1808, 2193
BcoDI GTCTC 4 cut(s) 381, 1040, 1557, 2080
BcuI ACTAGT 3 cut(s) 914, 1244, 1256
BfaI CTAG 9 cut(s) 414, 915, 999, 1119, 1245, 1257, 1461, 1673, 1898
BfmI CTRYAG 6 cut(s) 130, 546, 900, 936, 1203, 2216
BfoI RGCGCY 1 cut(s) 722
BfrI CTTAAG 1 cut(s) 652
BglI GCCNNNNNGGC 1 cut(s) 1431
BglII AGATCT 1 cut(s) 601
Bme1390I CCNGG 7 cut(s) 213, 756, 877, 1005, 1068, 1808, 2193
Bme18I GGWCC 2 cut(s) 569, 1007
BmeT110I CYCGRG 1 cut(s) 248
BmgT120I GGNCC 3 cut(s) 569, 1007, 1036
BmiI GGNNCC 7 cut(s) 178, 686, 720, 1224, 1845, 1853, 1869
BmrFI CCNGG 7 cut(s) 213, 756, 877, 1005, 1068, 1808, 2193
BmrI ACTGGG 1 cut(s) 594
BmuI ACTGGG 1 cut(s) 594
BpiI GAAGAC 1 cut(s) 310
BpmI CTGGAG 2 cut(s) 386, 1179
Bpu10I CCTNAGC 3 cut(s) 924, 1032, 2010
BpuEI CTTGAG 1 cut(s) 664
BsaAI YACGTR 2 cut(s) 965, 1217
BsaBI GATNNNNATC 2 cut(s) 624, 1075
BsaHI GRCGYC 1 cut(s) 719
BsaI GGTCTC 1 cut(s) 1557
BsaJI CCNNGG 8 cut(s) 265, 565, 696, 804, 1302, 1847, 2074, 2120
BsaWI WCCGGW 1 cut(s) 2182
Bsc4I CCNNNNNNNGG 9 cut(s) 146, 328, 887, 1150, 1456, 1898, 2021, 2075, 2203
Bse1I ACTGG 4 cut(s) 589, 1014, 1196, 1426
Bse8I GATNNNNATC 2 cut(s) 624, 1075
BseBI CCWGG 7 cut(s) 213, 756, 877, 1005, 1068, 1808, 2193
BseDI CCNNGG 8 cut(s) 265, 565, 696, 804, 1302, 1847, 2074, 2120
BseGI GGATG 6 cut(s) 112, 674, 790, 1285, 1553, 1762
BseJI GATNNNNATC 2 cut(s) 624, 1075
BseLI CCNNNNNNNGG 9 cut(s) 146, 328, 887, 1150, 1456, 1898, 2021, 2075, 2203
BseMII CTCAG 7 cut(s) 318, 938, 1046, 1493, 1568, 2024, 2067
BseNI ACTGG 4 cut(s) 589, 1014, 1196, 1426
BseRI GAGGAG 1 cut(s) 1864
BseSI GKGCMC 2 cut(s) 1227, 1537
BshNI GGYRCC 5 cut(s) 176, 684, 718, 1222, 1867
BsiHKAI GWGCWC 2 cut(s) 186, 1537
BsiHKCI CYCGRG 1 cut(s) 248
BsiSI CCGG 2 cut(s) 2058, 2183
BslFI GGGAC 1 cut(s) 1009
BslI CCNNNNNNNGG 9 cut(s) 146, 328, 887, 1150, 1456, 1898, 2021, 2075, 2203
BsmAI GTCTC 4 cut(s) 381, 1040, 1557, 2080
BsmFI GGGAC 1 cut(s) 1009
Bso31I GGTCTC 1 cut(s) 1557
BsoBI CYCGRG 1 cut(s) 248
Bsp1286I GDGCHC 3 cut(s) 186, 1227, 1537
Bsp143I GATC 7 cut(s) 244, 601, 625, 1163, 1883, 1990, 2005
Bsp19I CCATGG 4 cut(s) 565, 804, 2074, 2120
BspACI CCGC 7 cut(s) 262, 820, 908, 1736, 1927, 2097, 2136
BspCNI CTCAG 7 cut(s) 319, 937, 1045, 1492, 1567, 2023, 2066
BspHI TCATGA 1 cut(s) 1639
BspLI GGNNCC 7 cut(s) 178, 686, 720, 1224, 1845, 1853, 1869
BspMAI CTGCAG 3 cut(s) 134, 550, 1207
BspPI GGATC 5 cut(s) 620, 1171, 1891, 1998, 2000
BspT107I GGYRCC 5 cut(s) 176, 684, 718, 1222, 1867
BspTI CTTAAG 1 cut(s) 652
BspTNI GGTCTC 1 cut(s) 1557
BsrI ACTGG 4 cut(s) 589, 1014, 1196, 1426
BssECI CCNNGG 8 cut(s) 265, 565, 696, 804, 1302, 1847, 2074, 2120
BssMI GATC 7 cut(s) 244, 601, 625, 1163, 1883, 1990, 2005
BssNI GRCGYC 1 cut(s) 719
BssSI CACGAG 1 cut(s) 486
BssT1I CCWWGG 7 cut(s) 265, 565, 696, 804, 1302, 2074, 2120
Bst2BI CACGAG 1 cut(s) 486
Bst2UI CCWGG 7 cut(s) 213, 756, 877, 1005, 1068, 1808, 2193
Bst4CI ACNGT 6 cut(s) 39, 1063, 1352, 1619, 1655, 1766
Bst6I CTCTTC 5 cut(s) 335, 454, 739, 1592, 1628
BstACI GRCGYC 1 cut(s) 719
BstAFI CTTAAG 1 cut(s) 652
BstAPI GCANNNNNTGC 2 cut(s) 545, 1028
BstBAI YACGTR 2 cut(s) 965, 1217
BstC8I GCNNGC 5 cut(s) 591, 882, 1872, 1922, 2198
BstDEI CTNAG 9 cut(s) 327, 924, 1032, 1479, 1554, 1581, 1994, 2010, 2053
BstDSI CCRYGG 4 cut(s) 565, 804, 2074, 2120
BstF5I GGATG 6 cut(s) 112, 674, 790, 1285, 1553, 1762
BstH2I RGCGCY 1 cut(s) 722
BstHHI GCGC 1 cut(s) 721
BstKTI GATC 7 cut(s) 247, 604, 628, 1166, 1886, 1993, 2008
BstMAI GTCTC 4 cut(s) 381, 1040, 1557, 2080
BstMBI GATC 7 cut(s) 244, 601, 625, 1163, 1883, 1990, 2005
BstMWI GCNNNNNNNGC 7 cut(s) 524, 545, 881, 1028, 1431, 1492, 2197
BstNI CCWGG 7 cut(s) 213, 756, 877, 1005, 1068, 1808, 2193
BstNSI RCATGY 1 cut(s) 593
BstSCI CCNGG 7 cut(s) 211, 754, 875, 1003, 1066, 1806, 2191
BstSFI CTRYAG 6 cut(s) 130, 546, 900, 936, 1203, 2216
BstSLI GKGCMC 2 cut(s) 1227, 1537
BstSNI TACGTA 1 cut(s) 1217
BstV2I GAAGAC 1 cut(s) 310
BstX2I RGATCY 4 cut(s) 601, 1163, 1883, 1990
BstXI CCANNNNNNTGG 1 cut(s) 212
BstYI RGATCY 4 cut(s) 601, 1163, 1883, 1990
BtgI CCRYGG 4 cut(s) 565, 804, 2074, 2120
BtsCI GGATG 6 cut(s) 112, 674, 790, 1285, 1553, 1762
BtsIMutI CAGTG 1 cut(s) 582
Cac8I GCNNGC 5 cut(s) 591, 882, 1872, 1922, 2198
CaiI CAGNNNCTG 3 cut(s) 668, 1067, 1202
CciI TCATGA 1 cut(s) 1639
CfoI GCGC 1 cut(s) 721
Cfr13I GGNCC 3 cut(s) 569, 1007, 1036
Csp6I GTAC 9 cut(s) 57, 177, 657, 685, 896, 905, 1214, 1520, 2212
CviAII CATG 9 cut(s) 172, 294, 362, 566, 590, 805, 1640, 2075, 2121
CviQI GTAC 9 cut(s) 57, 177, 657, 685, 896, 905, 1214, 1520, 2212
DdeI CTNAG 9 cut(s) 327, 924, 1032, 1479, 1554, 1581, 1994, 2010, 2053
DinI GGCGCC 1 cut(s) 720
DpnI GATC 7 cut(s) 246, 603, 627, 1165, 1885, 1992, 2007
DpnII GATC 7 cut(s) 244, 601, 625, 1163, 1883, 1990, 2005
EaeI YGGCCR 2 cut(s) 878, 2194
Eam1104I CTCTTC 5 cut(s) 335, 454, 739, 1592, 1628
EarI CTCTTC 5 cut(s) 335, 454, 739, 1592, 1628
EciI GGCGGA 3 cut(s) 251, 809, 2125
Eco105I TACGTA 1 cut(s) 1217
Eco130I CCWWGG 7 cut(s) 265, 565, 696, 804, 1302, 2074, 2120
Eco147I AGGCCT 5 cut(s) 853, 875, 1723, 2169, 2191
Eco31I GGTCTC 1 cut(s) 1557
Eco32I GATATC 2 cut(s) 425, 1368
Eco47I GGWCC 2 cut(s) 569, 1007
Eco57I CTGAAG 4 cut(s) 90, 582, 690, 1710
Eco72I CACGTG 1 cut(s) 965
Eco88I CYCGRG 1 cut(s) 248
EcoO109I RGGNCCY 1 cut(s) 1007
EcoRI GAATTC 2 cut(s) 125, 1819
EcoRII CCWGG 7 cut(s) 211, 754, 875, 1003, 1066, 1806, 2191
EcoRV GATATC 2 cut(s) 425, 1368
EcoT14I CCWWGG 7 cut(s) 265, 565, 696, 804, 1302, 2074, 2120
EgeI GGCGCC 1 cut(s) 720
EheI GGCGCC 1 cut(s) 720
ErhI CCWWGG 7 cut(s) 265, 565, 696, 804, 1302, 2074, 2120
FaeI CATG 9 cut(s) 175, 297, 365, 569, 593, 808, 1643, 2078, 2124
FalI AAGNNNNNCTT 2 cut(s) 974, 1006
FaqI GGGAC 1 cut(s) 1009
FatI CATG 9 cut(s) 171, 293, 361, 565, 589, 804, 1639, 2074, 2120
FokI GGATG 6 cut(s) 99, 661, 797, 1292, 1560, 1769
FspBI CTAG 9 cut(s) 414, 915, 999, 1119, 1245, 1257, 1461, 1673, 1898
GlaI GCGC 1 cut(s) 720
GsuI CTGGAG 2 cut(s) 386, 1179
HaeII RGCGCY 1 cut(s) 722
HapII CCGG 2 cut(s) 2058, 2183
HhaI GCGC 1 cut(s) 721
Hin1I GRCGYC 1 cut(s) 719
Hin1II CATG 9 cut(s) 175, 297, 365, 569, 593, 808, 1643, 2078, 2124
Hin6I GCGC 1 cut(s) 719
HinP1I GCGC 1 cut(s) 719
HincII GTYRAC 1 cut(s) 1396
HindII GTYRAC 1 cut(s) 1396
HpaII CCGG 2 cut(s) 2058, 2183
HphI GGTGA 4 cut(s) 74, 942, 1976, 2039
Hpy188III TCNNGA 7 cut(s) 248, 250, 403, 479, 488, 1156, 1640
Hpy99I CGWCG 1 cut(s) 480
HpyAV CCTTC 6 cut(s) 582, 698, 709, 1020, 1734, 1747
HpyCH4III ACNGT 6 cut(s) 39, 1063, 1352, 1619, 1655, 1766
HpyCH4IV ACGT 2 cut(s) 964, 1216
HpyF10VI GCNNNNNNNGC 7 cut(s) 524, 545, 881, 1028, 1431, 1492, 2197
HpyF3I CTNAG 9 cut(s) 327, 924, 1032, 1479, 1554, 1581, 1994, 2010, 2053
HpySE526I ACGT 2 cut(s) 964, 1216
Hsp92I GRCGYC 1 cut(s) 719
Hsp92II CATG 9 cut(s) 175, 297, 365, 569, 593, 808, 1643, 2078, 2124
HspAI GCGC 1 cut(s) 719
KasI GGCGCC 1 cut(s) 718
KpnI GGTACC 2 cut(s) 180, 688
Kzo9I GATC 7 cut(s) 244, 601, 625, 1163, 1883, 1990, 2005
LmnI GCTCC 2 cut(s) 1843, 1851
MaeI CTAG 9 cut(s) 414, 915, 999, 1119, 1245, 1257, 1461, 1673, 1898
MaeII ACGT 2 cut(s) 964, 1216
MaeIII GTNAC 2 cut(s) 62, 2048
MalI GATC 7 cut(s) 246, 603, 627, 1165, 1885, 1992, 2007
MboI GATC 7 cut(s) 244, 601, 625, 1163, 1883, 1990, 2005
MflI RGATCY 4 cut(s) 601, 1163, 1883, 1990
MhlI GDGCHC 3 cut(s) 186, 1227, 1537
MlsI TGGCCA 2 cut(s) 880, 2196
MluNI TGGCCA 2 cut(s) 880, 2196
Mly113I GGCGCC 1 cut(s) 719
MlyI GAGTC 6 cut(s) 59, 299, 725, 1042, 1458, 1645
Mox20I TGGCCA 2 cut(s) 880, 2196
MroXI GAANNNNTTC 1 cut(s) 1314
MscI TGGCCA 2 cut(s) 880, 2196
MseI TTAA 8 cut(s) 636, 653, 956, 1170, 1359, 1689, 1797, 1838
Msp20I TGGCCA 2 cut(s) 880, 2196
MspA1I CMGCKG 2 cut(s) 1874, 1927
MspCI CTTAAG 1 cut(s) 652
MspI CCGG 2 cut(s) 2058, 2183
MspR9I CCNGG 7 cut(s) 213, 756, 877, 1005, 1068, 1808, 2193
MvaI CCWGG 7 cut(s) 213, 756, 877, 1005, 1068, 1808, 2193
MwoI GCNNNNNNNGC 7 cut(s) 524, 545, 881, 1028, 1431, 1492, 2197
NarI GGCGCC 1 cut(s) 719
NcoI CCATGG 4 cut(s) 565, 804, 2074, 2120
NdeII GATC 7 cut(s) 244, 601, 625, 1163, 1883, 1990, 2005
NlaIII CATG 9 cut(s) 175, 297, 365, 569, 593, 808, 1643, 2078, 2124
NlaIV GGNNCC 7 cut(s) 178, 686, 720, 1224, 1845, 1853, 1869
NmeAIII GCCGAG 1 cut(s) 1872
NmuCI GTSAC 1 cut(s) 62
NspI RCATGY 1 cut(s) 593
PaeI GCATGC 1 cut(s) 593
PaeR7I CTCGAG 1 cut(s) 248
PagI TCATGA 1 cut(s) 1639
PceI AGGCCT 5 cut(s) 853, 875, 1723, 2169, 2191
PcsI WCGNNNNNNNCGW 4 cut(s) 385, 427, 472, 484
PdmI GAANNNNTTC 1 cut(s) 1314
PfeI GAWTC 9 cut(s) 482, 491, 520, 647, 1071, 1097, 1315, 1577, 1862
PflMI CCANNNNNTGG 1 cut(s) 146
PfoI TCCNGGA 2 cut(s) 211, 1066
PleI GAGTC 6 cut(s) 59, 298, 725, 1042, 1458, 1644
PluTI GGCGCC 1 cut(s) 722
PmaCI CACGTG 1 cut(s) 965
PmlI CACGTG 1 cut(s) 965
PpsI GAGTC 6 cut(s) 59, 298, 725, 1042, 1458, 1644
Ppu21I YACGTR 2 cut(s) 965, 1217
PpuMI RGGWCCY 1 cut(s) 1007
PshBI ATTAAT 2 cut(s) 636, 1689
Psp5II RGGWCCY 1 cut(s) 1007
Psp6I CCWGG 7 cut(s) 211, 754, 875, 1003, 1066, 1806, 2191
PspCI CACGTG 1 cut(s) 965
PspGI CCWGG 7 cut(s) 211, 754, 875, 1003, 1066, 1806, 2191
PspN4I GGNNCC 7 cut(s) 178, 686, 720, 1224, 1845, 1853, 1869
PspPI GGNCC 3 cut(s) 569, 1007, 1036
PspPPI RGGWCCY 1 cut(s) 1007
PsrI GAACNNNNNNTAC 2 cut(s) 364, 396
PstI CTGCAG 3 cut(s) 134, 550, 1207
PstNI CAGNNNCTG 3 cut(s) 668, 1067, 1202
PsuI RGATCY 4 cut(s) 601, 1163, 1883, 1990
PvuII CAGCTG 1 cut(s) 1874
RsaI GTAC 9 cut(s) 58, 178, 658, 686, 897, 906, 1215, 1521, 2213
RsaNI GTAC 9 cut(s) 57, 177, 657, 685, 896, 905, 1214, 1520, 2212
SaqAI TTAA 8 cut(s) 636, 653, 956, 1170, 1359, 1689, 1797, 1838
Sau3AI GATC 7 cut(s) 244, 601, 625, 1163, 1883, 1990, 2005
Sau96I GGNCC 3 cut(s) 569, 1007, 1036
SchI GAGTC 6 cut(s) 59, 299, 725, 1042, 1458, 1645
ScrFI CCNGG 7 cut(s) 213, 756, 877, 1005, 1068, 1808, 2193
SduI GDGCHC 3 cut(s) 186, 1227, 1537
SfcI CTRYAG 6 cut(s) 130, 546, 900, 936, 1203, 2216
SfoI GGCGCC 1 cut(s) 720
Sfr274I CTCGAG 1 cut(s) 248
SinI GGWCC 2 cut(s) 569, 1007
SlaI CTCGAG 1 cut(s) 248
SmlI CTYRAG 3 cut(s) 248, 652, 679
SmoI CTYRAG 3 cut(s) 248, 652, 679
SnaBI TACGTA 1 cut(s) 1217
SpeI ACTAGT 3 cut(s) 914, 1244, 1256
SphI GCATGC 1 cut(s) 593
SseBI AGGCCT 5 cut(s) 853, 875, 1723, 2169, 2191
SsiI CCGC 7 cut(s) 262, 820, 908, 1736, 1927, 2097, 2136
SspDI GGCGCC 1 cut(s) 718
SspI AATATT 1 cut(s) 227
SspMI CTAG 9 cut(s) 414, 915, 999, 1119, 1245, 1257, 1461, 1673, 1898
StuI AGGCCT 5 cut(s) 853, 875, 1723, 2169, 2191
StyD4I CCNGG 7 cut(s) 211, 754, 875, 1003, 1066, 1806, 2191
StyI CCWWGG 7 cut(s) 265, 565, 696, 804, 1302, 2074, 2120
TaaI ACNGT 6 cut(s) 39, 1063, 1352, 1619, 1655, 1766
TaiI ACGT 2 cut(s) 967, 1219
TaqI TCGA 5 cut(s) 249, 421, 1051, 1155, 1751
TaqII GACCGA 1 cut(s) 456
TatI WGTACW 1 cut(s) 656
TauI GCSGC 1 cut(s) 2099
TfiI GAWTC 9 cut(s) 482, 491, 520, 647, 1071, 1097, 1315, 1577, 1862
Tru1I TTAA 8 cut(s) 636, 653, 956, 1170, 1359, 1689, 1797, 1838
Tru9I TTAA 8 cut(s) 636, 653, 956, 1170, 1359, 1689, 1797, 1838
TscAI CASTG 1 cut(s) 589
TseFI GTSAC 1 cut(s) 62
Tsp45I GTSAC 1 cut(s) 62
TspDTI ATGAA 7 cut(s) 171, 237, 353, 630, 1089, 1656, 1815
TspGWI ACGGA 2 cut(s) 1625, 1856
TspRI CASTG 1 cut(s) 589
Van91I CCANNNNNTGG 1 cut(s) 146
Vha464I CTTAAG 1 cut(s) 652
VneI GTGCAC 1 cut(s) 1533
VpaK11BI GGWCC 2 cut(s) 569, 1007
VspI ATTAAT 2 cut(s) 636, 1689
XapI RAATTY 5 cut(s) 125, 1024, 1819, 1943, 1999
XceI RCATGY 1 cut(s) 593
XhoI CTCGAG 1 cut(s) 248
XmnI GAANNNNTTC 1 cut(s) 1314
XspI CTAG 9 cut(s) 414, 915, 999, 1119, 1245, 1257, 1461, 1673, 1898
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.