Rh5CG095000

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000854
Physical Location & Seq
Forward (+)
7510752 .. 7513274
2523 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG095000.1

Sequence Viewer

Length: 2229 bp
ATGGACGATTGCTGTGCAGTGTGTGCCGACACCCTGGAATGGGTTGCTTATGGGGCCTGTGGCCATAAGGAGGTCTGCTCCACCTGCGTGGCTCGCCTCCGTTTCATCTGCGAGGACCGCCGTTGCTGCATCTGCAAGACCGAGTCCAACGTCGTTTTTGTCACCAAGGCTCTAGGAGACTATACCAAGATGGTTAGAGACTTGCCATCTAAAGCAAGGGAGGGTCGCTGTGGATCATATTGGTACCATGAGGACACACAAGCATTTTTCGACGATGCGGATCACTACAAGATGATCAAGGCAGTGTGCAATCTTTCATGCAGTGAATGTGACAAGATGGAGGAGAAATCAACGATTAGGTTTCGGAACATTGAACAGCTCAAGTTGCACTTGTTCCACCAGCATAGGTTGTATATGTGTCCTCTATGTTTGGAAGGGAGGAAGGTGTTTGTATGTGAACAAAAGCTTTATACTAAAGCCCAGTTGAAACGGCATACAAGTACAGGGGACTCTGTAGTTGATGGAAGTGAAAGCGAAAGAGGTGGCTTCAAGGGACATCCTATGTGTAAGTTTTGCAAAATTGGATTCTACGGCGAGAATGAACTGTATGCTCACATGACTACTGGTCACTATAAGTGTCATTTATGTTGCGATTCTGGAGAACAGTATGAATATTATAAGAATTATCATGACCTCGAGTTGCACTTCAGCCGAGGCCATTTTCTATGTGAAGATGAGTCCTGCCTTGAGAAAAAGTTTGTGGTGTTCCGATCTGAGGCAGAATTGAAGAAGCACAGTACTATGGAACATGGGGGGCGTATGTCTCGCTCCAAGCGTAATGCTGCTCTCCAATTACCAACTAGCTTCCGATATGGACCAAGTAATGACCAAGATAGTAGACGTGGAAGAAGAGGTCTGCCATTTCGCGGCGATTCTTCTAATGATCAAGCAAGCAGTTTGGAGACACCTAATGCTGATGATAGAACATTGCATGATCCTTCATCATCCATTAGGCAAGCTGGTAGTTTGGAATTACTTGGAGATACAAGTGACATTGATCCAATCATTAAGCCATTTGAGTCCTTAAGTCGACCTTCAAGTGATACAGAAGCATCTTCAAGGTACCTGCGAGTAGCCTTGGGGAAAAACAGTGGGAAAGCGAAAGCGCAATTGGAGGACTCTTCCTTATTTCCTCCCCTTGCACCTGGCAGCAGCAGCAGTCAACTGACTCCCAAACATGAATCCGATCATGGTTTGCCTAACAACAATACCATGGCAGCACATCTCCGCAGGCAAAACAACCGGAAGATGGCTGTTGAGTGTCCTGATATTAGGCCTGCTGTTATTAGTTCTAGTGAGGCTTGGCCAGCAGCGGGGCGTGTAGCACCACCTGCTAGTTCATCTCAGATGCCGTGGCCTAAAACTAATGTTCCAGGGATTGTCTCAGCAGTTACTAAACCTGCTGTTAGTTCTAGTCAGGCTTGGCCAGCAGCTGGGCGTGTAGCTCCACCTACTAATTCATCTCAGATGGCATGGCCTAAAGCAAATGTGAGTGCAGCACCACCTACTAGTTCATCTCAGAAGCTGTTGTCTAAAACTAATAGTCAGAACAAGGCGTGGCCGAAGGTTTCAGGTTGTGGTCAGAACAAGACGGCCTTTGGTAAGGGAGCAGGACATTCCAGCTATGCAAGCACTCTGCAGGCTCAAGTTGAGAACCGAGAGACATCAACAGAAGTGCACAAGTGCGTGAGTTTGGATTCCAGCTTGGATTTCCCTCCAGTTTCAGCAGCACAAGTAGTGCAAAAGTTGCCCCAACAAACTAGTGAGCCTTTATTGAAAGTGGGGGATTTTCAAGCTGCTAATAAGGCCTTGGTGGAAAATATTCGCGCTGCTGTTGACTTCAATGAAGACAAATACACTGCGTTTAAGGACATATCTGTACAGTATAGTCAGGGATTGGTGGACATAAACATGTATTTTAATTTTGTGAGGCAGTTTGGGTTGTTACATCTTGTCCTTGACTTGGCTAGACTGTGCCCCAATGCTGAGAAGCAGCAAGAGCTAATTGATGCCTACGATAACAGTATGAGAAGCAATGGTGCAGAAGAGGATGATGGATGGTCTCAGGTCAAGGTCCGATTGAAAGATTTGAAGAAAGGGAAAGGGAAGAGTTCTAAGAATGGCTCTACTGCAGCACCAGTTTTAGATCTCAGGTCAAGGTCCGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

742

Amino Acids

82.21

Weight (kDa)

8.38

Isoelectric Point (pI)

51.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RING_ZNF598 PF25447 2 - 61 2.8e-07 ZNF598 RING finger domain
zf-C2H2_13 PF23230 210 - 265 2.4e-14 C2H2-type zinc finger
PAH_ZNF598 PF23202 618 - 693 2.6e-18 ZNF598 PAH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 678
AarI CACCTGC 2 cut(s) 92, 1399
Acc36I ACCTGC 4 cut(s) 92, 1134, 1399, 1468
Acc65I GGTACC 2 cut(s) 243, 1122
AccB1I GGYRCC 2 cut(s) 243, 1122
AccB7I CCANNNNNTGG 1 cut(s) 1493
AccI GTMKAC 2 cut(s) 898, 1090
AccII CGCG 2 cut(s) 927, 1887
AciI CCGC 5 cut(s) 118, 278, 927, 1288, 1373
AclWI GGATC 4 cut(s) 241, 288, 989, 1052
AcoI YGGCCR 4 cut(s) 61, 1364, 1484, 1619
AcuI CTGAAG 1 cut(s) 691
AfaI GTAC 5 cut(s) 245, 502, 799, 1124, 1941
AfiI CCNNNNNNNGG 9 cut(s) 39, 40, 70, 775, 926, 1309, 1373, 1493, 2023
AflII CTTAAG 1 cut(s) 1084
AflIII ACRYGT 1 cut(s) 1971
AhdI GACNNNNNGTC 1 cut(s) 624
AhlI ACTAGT 2 cut(s) 1568, 1820
AjiI CACGTC 1 cut(s) 902
AjnI CCWGG 3 cut(s) 33, 1204, 1432
AjuI GAANNNNNNNTTGG 2 cut(s) 1154, 1186
AleI CACNNNNGTG 1 cut(s) 86
Alw21I GWGCWC 1 cut(s) 1740
Alw26I GTCTC 7 cut(s) 171, 192, 828, 956, 1447, 1715, 2127
Alw44I GTGCAC 1 cut(s) 1736
AlwI GGATC 4 cut(s) 241, 288, 989, 1052
AlwNI CAGNNNCTG 2 cut(s) 1493, 1585
Ama87I CYCGRG 1 cut(s) 695
ApaLI GTGCAC 1 cut(s) 1736
Asp700I GAANNNNTTC 1 cut(s) 1881
Asp718I GGTACC 2 cut(s) 243, 1122
AspLEI GCGC 2 cut(s) 1168, 1889
AspS9I GGNCC 5 cut(s) 54, 115, 875, 2134, 2220
AsuHPI GGTGA 1 cut(s) 154
AvaI CYCGRG 1 cut(s) 695
AvaII GGWCC 4 cut(s) 115, 875, 2134, 2220
BaeGI GKGCMC 2 cut(s) 1740, 2039
BalI TGGCCA 3 cut(s) 63, 1366, 1486
BanI GGYRCC 2 cut(s) 243, 1122
BbsI GAAGAC 1 cut(s) 1914
Bbv12I GWGCWC 1 cut(s) 1740
BccI CCATC 8 cut(s) 184, 214, 331, 515, 1303, 1522, 2108, 2112
BceAI ACGGC 5 cut(s) 105, 506, 607, 1396, 1668
BcgI CGANNNNNNTGC 1 cut(s) 30
BciT130I CCWGG 3 cut(s) 35, 1206, 1434
BclI TGATCA 2 cut(s) 294, 943
BcoDI GTCTC 7 cut(s) 171, 192, 828, 956, 1447, 1715, 2127
BcuI ACTAGT 2 cut(s) 1568, 1820
BfaI CTAG 8 cut(s) 173, 861, 1353, 1395, 1473, 1569, 1821, 2028
BfmI CTRYAG 3 cut(s) 513, 1697, 2190
BfrI CTTAAG 1 cut(s) 1084
BfuAI ACCTGC 4 cut(s) 92, 1134, 1399, 1468
BglII AGATCT 1 cut(s) 2206
BmcAI AGTACT 1 cut(s) 799
Bme1390I CCNGG 3 cut(s) 35, 1206, 1434
Bme18I GGWCC 4 cut(s) 115, 875, 2134, 2220
BmeRI GACNNNNNGTC 1 cut(s) 624
BmeT110I CYCGRG 1 cut(s) 695
BmgBI CACGTC 1 cut(s) 902
BmgT120I GGNCC 5 cut(s) 54, 115, 875, 2134, 2220
BmiI GGNNCC 3 cut(s) 55, 245, 1124
BmrFI CCNGG 3 cut(s) 35, 1206, 1434
BmrI ACTGGG 1 cut(s) 475
BmsI GCATC 5 cut(s) 138, 265, 1121, 1398, 2059
BmuI ACTGGG 1 cut(s) 475
BpiI GAAGAC 1 cut(s) 1914
BplI GAGNNNNNCTC 2 cut(s) 62, 94
BpmI CTGGAG 2 cut(s) 678, 1761
BpuEI CTTGAG 3 cut(s) 365, 767, 1689
BsaBI GATNNNNATC 1 cut(s) 279
BsaI GGTCTC 1 cut(s) 2127
BsaJI CCNNGG 8 cut(s) 33, 165, 712, 1137, 1272, 1412, 1433, 1869
BsaWI WCCGGW 1 cut(s) 1302
Bsc4I CCNNNNNNNGG 9 cut(s) 39, 40, 70, 775, 926, 1309, 1373, 1493, 2023
Bse1I ACTGG 4 cut(s) 481, 628, 1778, 2198
Bse3DI GCAATG 2 cut(s) 986, 2101
Bse8I GATNNNNATC 1 cut(s) 279
BseBI CCWGG 3 cut(s) 35, 1206, 1434
BseDI CCNNGG 8 cut(s) 33, 165, 712, 1137, 1272, 1412, 1433, 1869
BseGI GGATG 4 cut(s) 556, 1004, 2116, 2123
BseJI GATNNNNATC 1 cut(s) 279
BseLI CCNNNNNNNGG 9 cut(s) 39, 40, 70, 775, 926, 1309, 1373, 1493, 2023
BseMI GCAATG 2 cut(s) 986, 2101
BseMII CTCAG 8 cut(s) 765, 1418, 1458, 1538, 1592, 2037, 2138, 2224
BseNI ACTGG 4 cut(s) 481, 628, 1778, 2198
BseRI GAGGAG 1 cut(s) 356
BseSI GKGCMC 2 cut(s) 1740, 2039
BseYI CCCAGC 1 cut(s) 1493
BsgI GTGCAG 3 cut(s) 36, 1575, 2121
Bsh1236I CGCG 2 cut(s) 927, 1887
BshNI GGYRCC 2 cut(s) 243, 1122
BsiHKAI GWGCWC 1 cut(s) 1740
BsiHKCI CYCGRG 1 cut(s) 695
BsiSI CCGG 1 cut(s) 1303
BslFI GGGAC 2 cut(s) 521, 567
BslI CCNNNNNNNGG 9 cut(s) 39, 40, 70, 775, 926, 1309, 1373, 1493, 2023
BsmAI GTCTC 7 cut(s) 171, 192, 828, 956, 1447, 1715, 2127
BsmFI GGGAC 2 cut(s) 521, 567
Bso31I GGTCTC 1 cut(s) 2127
BsoBI CYCGRG 1 cut(s) 695
Bsp1286I GDGCHC 2 cut(s) 1740, 2039
Bsp1407I TGTACA 1 cut(s) 1939
Bsp143I GATC 9 cut(s) 233, 280, 294, 770, 943, 994, 1057, 1246, 2206
Bsp19I CCATGG 1 cut(s) 1272
BspACI CCGC 5 cut(s) 118, 278, 927, 1288, 1373
BspCNI CTCAG 8 cut(s) 766, 1417, 1457, 1537, 1591, 2038, 2137, 2223
BspFNI CGCG 2 cut(s) 927, 1887
BspHI TCATGA 1 cut(s) 688
BspLI GGNNCC 3 cut(s) 55, 245, 1124
BspMAI CTGCAG 2 cut(s) 1701, 2194
BspMI ACCTGC 4 cut(s) 92, 1134, 1399, 1468
BspPI GGATC 4 cut(s) 241, 288, 989, 1052
BspT107I GGYRCC 2 cut(s) 243, 1122
BspTI CTTAAG 1 cut(s) 1084
BspTNI GGTCTC 1 cut(s) 2127
BsrDI GCAATG 2 cut(s) 986, 2101
BsrGI TGTACA 1 cut(s) 1939
BsrI ACTGG 4 cut(s) 481, 628, 1778, 2198
BssECI CCNNGG 8 cut(s) 33, 165, 712, 1137, 1272, 1412, 1433, 1869
BssMI GATC 9 cut(s) 233, 280, 294, 770, 943, 994, 1057, 1246, 2206
BssT1I CCWWGG 4 cut(s) 165, 1137, 1272, 1869
Bst2UI CCWGG 3 cut(s) 35, 1206, 1434
Bst4CI ACNGT 7 cut(s) 606, 666, 797, 1151, 1944, 2034, 2084
Bst6I CTCTTC 4 cut(s) 904, 1186, 2100, 2162
BstAFI CTTAAG 1 cut(s) 1084
BstAPI GCANNNNNTGC 3 cut(s) 23, 1391, 1807
BstAUI TGTACA 1 cut(s) 1939
BstC8I GCNNGC 9 cut(s) 94, 952, 1017, 1292, 1338, 1368, 1488, 1690, 1701
BstDEI CTNAG 9 cut(s) 774, 1404, 1444, 1524, 1578, 2046, 2124, 2175, 2210
BstDSI CCRYGG 2 cut(s) 1272, 1412
BstF5I GGATG 4 cut(s) 556, 1004, 2116, 2123
BstFNI CGCG 2 cut(s) 927, 1887
BstHHI GCGC 2 cut(s) 1168, 1889
BstKTI GATC 9 cut(s) 236, 283, 297, 773, 946, 997, 1060, 1249, 2209
BstMAI GTCTC 7 cut(s) 171, 192, 828, 956, 1447, 1715, 2127
BstMBI GATC 9 cut(s) 233, 280, 294, 770, 943, 994, 1057, 1246, 2206
BstNI CCWGG 3 cut(s) 35, 1206, 1434
BstNSI RCATGY 1 cut(s) 1975
BstSCI CCNGG 3 cut(s) 33, 1204, 1432
BstSFI CTRYAG 3 cut(s) 513, 1697, 2190
BstSLI GKGCMC 2 cut(s) 1740, 2039
BstUI CGCG 2 cut(s) 927, 1887
BstV2I GAAGAC 1 cut(s) 1914
BstX2I RGATCY 1 cut(s) 2206
BstXI CCANNNNNNTGG 1 cut(s) 88
BstYI RGATCY 1 cut(s) 2206
BtgI CCRYGG 2 cut(s) 1272, 1412
BtrI CACGTC 1 cut(s) 902
BtsCI GGATG 4 cut(s) 556, 1004, 2116, 2123
BtsI GCAGTG 4 cut(s) 24, 309, 328, 1917
BtsIMutI CAGTG 5 cut(s) 24, 309, 328, 1156, 1917
BveI ACCTGC 4 cut(s) 92, 1134, 1399, 1468
Cac8I GCNNGC 9 cut(s) 94, 952, 1017, 1292, 1338, 1368, 1488, 1690, 1701
CaiI CAGNNNCTG 2 cut(s) 1493, 1585
CciI TCATGA 1 cut(s) 688
CfoI GCGC 2 cut(s) 1168, 1889
Cfr13I GGNCC 5 cut(s) 54, 115, 875, 2134, 2220
Csp6I GTAC 5 cut(s) 244, 501, 798, 1123, 1940
CviQI GTAC 5 cut(s) 244, 501, 798, 1123, 1940
DdeI CTNAG 9 cut(s) 774, 1404, 1444, 1524, 1578, 2046, 2124, 2175, 2210
DpnI GATC 9 cut(s) 235, 282, 296, 772, 945, 996, 1059, 1248, 2208
DpnII GATC 9 cut(s) 233, 280, 294, 770, 943, 994, 1057, 1246, 2206
DriI GACNNNNNGTC 1 cut(s) 624
EaeI YGGCCR 4 cut(s) 61, 1364, 1484, 1619
Eam1104I CTCTTC 4 cut(s) 904, 1186, 2100, 2162
Eam1105I GACNNNNNGTC 1 cut(s) 624
EarI CTCTTC 4 cut(s) 904, 1186, 2100, 2162
Eco130I CCWWGG 4 cut(s) 165, 1137, 1272, 1869
Eco147I AGGCCT 2 cut(s) 1336, 1868
Eco31I GGTCTC 1 cut(s) 2127
Eco47I GGWCC 4 cut(s) 115, 875, 2134, 2220
Eco57I CTGAAG 1 cut(s) 691
Eco88I CYCGRG 1 cut(s) 695
EcoO109I RGGNCCY 1 cut(s) 54
EcoRII CCWGG 3 cut(s) 33, 1204, 1432
EcoT14I CCWWGG 4 cut(s) 165, 1137, 1272, 1869
ErhI CCWWGG 4 cut(s) 165, 1137, 1272, 1869
FalI AAGNNNNNCTT 6 cut(s) 374, 406, 1078, 1110, 1640, 1672
FaqI GGGAC 2 cut(s) 521, 567
FauI CCCGC 1 cut(s) 1366
FbaI TGATCA 2 cut(s) 294, 943
FblI GTMKAC 2 cut(s) 898, 1090
FokI GGATG 4 cut(s) 543, 991, 2123, 2130
FspBI CTAG 8 cut(s) 173, 861, 1353, 1395, 1473, 1569, 1821, 2028
GlaI GCGC 2 cut(s) 1167, 1888
GsaI CCCAGC 1 cut(s) 1497
GsuI CTGGAG 2 cut(s) 678, 1761
HapII CCGG 1 cut(s) 1303
HhaI GCGC 2 cut(s) 1168, 1889
Hin6I GCGC 2 cut(s) 1166, 1887
HinP1I GCGC 2 cut(s) 1166, 1887
HincII GTYRAC 3 cut(s) 1091, 1223, 1897
HindII GTYRAC 3 cut(s) 1091, 1223, 1897
HindIII AAGCTT 1 cut(s) 464
HpaII CCGG 1 cut(s) 1303
HphI GGTGA 1 cut(s) 154
Hpy166II GTNNAC 7 cut(s) 458, 899, 1091, 1223, 1738, 1897, 1963
Hpy188III TCNNGA 3 cut(s) 657, 689, 1325
Hpy8I GTNNAC 7 cut(s) 458, 899, 1091, 1223, 1738, 1897, 1963
Hpy99I CGWCG 2 cut(s) 155, 275
HpyAV CCTTC 5 cut(s) 428, 436, 1008, 1104, 1618
HpyCH4III ACNGT 7 cut(s) 606, 666, 797, 1151, 1944, 2034, 2084
HpyCH4IV ACGT 2 cut(s) 150, 901
HpyF3I CTNAG 9 cut(s) 774, 1404, 1444, 1524, 1578, 2046, 2124, 2175, 2210
HpySE526I ACGT 2 cut(s) 150, 901
HspAI GCGC 2 cut(s) 1166, 1887
KpnI GGTACC 2 cut(s) 247, 1126
Ksp22I TGATCA 2 cut(s) 294, 943
Kzo9I GATC 9 cut(s) 233, 280, 294, 770, 943, 994, 1057, 1246, 2206
LmnI GCTCC 4 cut(s) 83, 833, 1510, 1667
LweI GCATC 5 cut(s) 138, 265, 1121, 1398, 2059
MaeI CTAG 8 cut(s) 173, 861, 1353, 1395, 1473, 1569, 1821, 2028
MaeII ACGT 2 cut(s) 150, 901
MaeIII GTNAC 6 cut(s) 160, 329, 626, 1049, 1450, 2004
MalI GATC 9 cut(s) 235, 282, 296, 772, 945, 996, 1059, 1248, 2208
MboI GATC 9 cut(s) 233, 280, 294, 770, 943, 994, 1057, 1246, 2206
MfeI CAATTG 1 cut(s) 1169
MflI RGATCY 1 cut(s) 2206
MhlI GDGCHC 2 cut(s) 1740, 2039
MlsI TGGCCA 3 cut(s) 63, 1366, 1486
MluCI AATT 9 cut(s) 579, 682, 782, 851, 1031, 1169, 1516, 1981, 2064
MluNI TGGCCA 3 cut(s) 63, 1366, 1486
MlyI GAGTC 6 cut(s) 152, 503, 746, 1088, 1172, 1222
MmeI TCCRAC 1 cut(s) 171
Mox20I TGGCCA 3 cut(s) 63, 1366, 1486
MroXI GAANNNNTTC 1 cut(s) 1881
MscI TGGCCA 3 cut(s) 63, 1366, 1486
MseI TTAA 4 cut(s) 1068, 1085, 1926, 1980
MslI CAYNNNNRTG 2 cut(s) 86, 1970
Msp20I TGGCCA 3 cut(s) 63, 1366, 1486
MspA1I CMGCKG 2 cut(s) 1373, 1493
MspCI CTTAAG 1 cut(s) 1084
MspI CCGG 1 cut(s) 1303
MspR9I CCNGG 3 cut(s) 35, 1206, 1434
MunI CAATTG 1 cut(s) 1169
MvaI CCWGG 3 cut(s) 35, 1206, 1434
MvnI CGCG 2 cut(s) 927, 1887
NcoI CCATGG 1 cut(s) 1272
NdeII GATC 9 cut(s) 233, 280, 294, 770, 943, 994, 1057, 1246, 2206
NlaIV GGNNCC 3 cut(s) 55, 245, 1124
NmeAIII GCCGAG 1 cut(s) 737
NmuCI GTSAC 4 cut(s) 160, 329, 626, 1049
NspI RCATGY 1 cut(s) 1975
OliI CACNNNNGTG 1 cut(s) 86
PaeR7I CTCGAG 1 cut(s) 695
PagI TCATGA 1 cut(s) 688
PaqCI CACCTGC 2 cut(s) 92, 1399
PceI AGGCCT 2 cut(s) 1336, 1868
PciI ACATGT 1 cut(s) 1971
PcsI WCGNNNNNNNCGW 1 cut(s) 832
PdmI GAANNNNTTC 1 cut(s) 1881
PfeI GAWTC 5 cut(s) 585, 653, 932, 1241, 1757
PflFI GACNNNGTC 1 cut(s) 142
PflMI CCANNNNNTGG 1 cut(s) 1493
PleI GAGTC 6 cut(s) 151, 503, 745, 1087, 1172, 1222
PpsI GAGTC 6 cut(s) 151, 503, 745, 1087, 1172, 1222
PscI ACATGT 1 cut(s) 1971
PsiI TTATAA 1 cut(s) 678
Psp6I CCWGG 3 cut(s) 33, 1204, 1432
PspFI CCCAGC 1 cut(s) 1493
PspGI CCWGG 3 cut(s) 33, 1204, 1432
PspN4I GGNNCC 3 cut(s) 55, 245, 1124
PspPI GGNCC 5 cut(s) 54, 115, 875, 2134, 2220
PspXI VCTCGAGB 1 cut(s) 695
PstI CTGCAG 2 cut(s) 1701, 2194
PstNI CAGNNNCTG 2 cut(s) 1493, 1585
PsuI RGATCY 1 cut(s) 2206
PsyI GACNNNGTC 1 cut(s) 142
PvuII CAGCTG 1 cut(s) 1493
RsaI GTAC 5 cut(s) 245, 502, 799, 1124, 1941
RsaNI GTAC 5 cut(s) 244, 501, 798, 1123, 1940
RseI CAYNNNNRTG 2 cut(s) 86, 1970
SalI GTCGAC 1 cut(s) 1089
SaqAI TTAA 4 cut(s) 1068, 1085, 1926, 1980
Sau3AI GATC 9 cut(s) 233, 280, 294, 770, 943, 994, 1057, 1246, 2206
Sau96I GGNCC 5 cut(s) 54, 115, 875, 2134, 2220
ScaI AGTACT 1 cut(s) 799
SchI GAGTC 6 cut(s) 152, 503, 746, 1088, 1172, 1222
ScrFI CCNGG 3 cut(s) 35, 1206, 1434
SduI GDGCHC 2 cut(s) 1740, 2039
SfaNI GCATC 5 cut(s) 138, 265, 1121, 1398, 2059
SfcI CTRYAG 3 cut(s) 513, 1697, 2190
Sfr274I CTCGAG 1 cut(s) 695
SinI GGWCC 4 cut(s) 115, 875, 2134, 2220
SlaI CTCGAG 1 cut(s) 695
SmiMI CAYNNNNRTG 2 cut(s) 86, 1970
SmlI CTYRAG 5 cut(s) 380, 695, 746, 1084, 1704
SmoI CTYRAG 5 cut(s) 380, 695, 746, 1084, 1704
SpeI ACTAGT 2 cut(s) 1568, 1820
Sse9I AATT 9 cut(s) 579, 682, 782, 851, 1031, 1169, 1516, 1981, 2064
SseBI AGGCCT 2 cut(s) 1336, 1868
SsiI CCGC 5 cut(s) 118, 278, 927, 1288, 1373
SspI AATATT 2 cut(s) 674, 1882
SspMI CTAG 8 cut(s) 173, 861, 1353, 1395, 1473, 1569, 1821, 2028
StuI AGGCCT 2 cut(s) 1336, 1868
StyD4I CCNGG 3 cut(s) 33, 1204, 1432
StyI CCWWGG 4 cut(s) 165, 1137, 1272, 1869
TaaI ACNGT 7 cut(s) 606, 666, 797, 1151, 1944, 2034, 2084
TaiI ACGT 2 cut(s) 153, 904
TaqI TCGA 3 cut(s) 270, 696, 1090
TaqII GACCGA 1 cut(s) 155
TasI AATT 9 cut(s) 579, 682, 782, 851, 1031, 1169, 1516, 1981, 2064
TatI WGTACW 3 cut(s) 500, 797, 1939
TauI GCSGC 1 cut(s) 930
TfiI GAWTC 5 cut(s) 585, 653, 932, 1241, 1757
Tru1I TTAA 4 cut(s) 1068, 1085, 1926, 1980
Tru9I TTAA 4 cut(s) 1068, 1085, 1926, 1980
TscAI CASTG 5 cut(s) 24, 309, 328, 1156, 1924
TseFI GTSAC 4 cut(s) 160, 329, 626, 1049
Tsp45I GTSAC 4 cut(s) 160, 329, 626, 1049
TspGWI ACGGA 1 cut(s) 89
TspRI CASTG 5 cut(s) 24, 309, 328, 1156, 1924
Tth111I GACNNNGTC 1 cut(s) 142
Van91I CCANNNNNTGG 1 cut(s) 1493
Vha464I CTTAAG 1 cut(s) 1084
VneI GTGCAC 1 cut(s) 1736
VpaK11BI GGWCC 4 cut(s) 115, 875, 2134, 2220
XceI RCATGY 1 cut(s) 1975
XhoI CTCGAG 1 cut(s) 695
XmiI GTMKAC 2 cut(s) 898, 1090
XmnI GAANNNNTTC 1 cut(s) 1881
XspI CTAG 8 cut(s) 173, 861, 1353, 1395, 1473, 1569, 1821, 2028
ZrmI AGTACT 1 cut(s) 799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.