Rh1DG083600

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000854
Physical Location & Seq
Reverse (-)
15378400 .. 15387510
9111 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG083600.1

Sequence Viewer

Length: 1854 bp
ATGCACTTCCGCCAAGGCCATTTCCTATGTGAAGATGAGTCATGTCTTGCCAAAAAGTTTATTGTCTTCCAATCTGAGGCAGAAATGAAGAGGCACAATACTATTGAACATGGGGGGCGTATGTCTCGTTCCAAGCGTAATGCTGCTCTACAGATACCAACTAGCTTTCGATATCGACGAAGTAGTGAACAAGATAATAGGCGTGGAAGAGGTCGGTCATTTCGTCGTGAATCTCGTGATTCTTCTGATAATCAACTTTCTATGGCAATTCAAGCAAGTTTGGAGGCATCTACTGCAGATGATAGCACATTCCCTGGCCCTTCCTCGTCCACTGGGCATGCTGCTTCAGATCTTGGAGATACAAGTGATATTGATCCAATCATTAATTCATTTGAATCCTTAAGTACAACAGATGCTGAAGCATCCTCAAGGTACCTTCAAGCCTTGGGGCAAAGTTCTGGGAAGGCGCCTTTGCAGGACTCTTCCTTTCCTCCCCTCGCACCCGGAAGCAGTCAATCAACACCTATCTCGGATGGTTTGCCTAATAACACCATGGCAGCACATCTCCGCCGTCAAAACAATCGCAAGGTGGCTGTTAGGCCTGTTATTAGTTCTGGTCAGGCCTGGCCAGCAGCAGGGCGTGTACCTGTAGTACCGCCTACTAGTTCAGCTCAGGGGTGGTCTACAGCACAGGTTTCACCTTTAATATCACGTGGTTCTGGTCAGAACAAGATGGCCTTTGGGAATAGACCAGGACCTTCCAGTTATGCAAATTCTGCTCAGGCCCAAGTTGAGACTCGACAGACAACAGTTCCTGGATTCTCATCATCTGGTTCGTCGCGGGATTCATTCAACACTAACTCTGCTAGGATTAGCCATTCTGCATCTGCCCCTAATTTGGTCGAGAATGGATCTGTTAAACCTTCCATCTCCGATTTCCCTCCAGTTTCTGCATCACAAGTACGTAAGGTGCCCTCAATTAGCCAGCCAACTAGTCAGCCTGTATTGAAAGTGGATGTTCAAACTGCTAACAAGTCCTTGGTGGAAAAGATTCGTGCTGCCGTTGAGTTTGACGAAGAAAAATACAGTGTTTTTAAGGAGATATCTGGGCAGTATCGTCAGGGTTTAGTTGACACAGAAGTATATTTAGATTTTGTTCGGCAGTATGGCTTGTTGCATCTTGTCCTTGACTTGGCTAGACTCTGCCCTGATGCTCAGAAGCAGAGAGAGCTGATTGATGCCTACAATAGGAGTGTACGAAACAATGGTGCACAAGAGAATGGATGGTCTCAGGGAAGTGTCCGATTGAAAGATTCTAAGAAAGGTAGAGGGAAGAGTTCAGAAACGGAAAACAGTAAGGCTAAAGGGAAGAGTCTTGAAGTGGAAAACAGTAGTTCAACGGACACACTAGCAGATAGCATTATTAATTCTGTAAGGGAACTTCAATCAAACAACAGGCCTTCAGAAGAAGCGGTTGAGGTGTTGTCGAAGGATGGCTACCGTGCTGCCAAAGGCAAATCAAAGCTGATAGTTAATGAACGCCAGGAGGAATTGAATTCTCGCAATCAAGCCTTAACGGAGCCGAGGAGCCAAAAGGATTCGGTACCAGCTGTTAGTGGTTCTAATCCACATCTAGGAGATGGTGGTGGAGGAAGCAAGCAGCGGAAGAAAACCTCAAAATTCCATAGAGTTCGCTTGGGTGATGGCTCTGCTGCATCTCGCTTGGATCTTAGAAATTCTGATCCTCAGCCAGATGACGGGGGTGAACAATTAGATGAGAGCAGTAACTCGGCCGGAGGATTGCCTGTCCATGGTGTTTGGAGACACAAAGCCGCCAATAAACTTTTTAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

617

Amino Acids

66.75

Weight (kDa)

9.47

Isoelectric Point (pI)

57.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C2H2_13 PF23230 2 - 32 5.5e-08 C2H2-type zinc finger
PAH_ZNF598 PF23202 341 - 416 4.5e-20 ZNF598 PAH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 432, 1603
AccB1I GGYRCC 4 cut(s) 432, 466, 970, 1603
AccI GTMKAC 1 cut(s) 683
AccII CGCG 1 cut(s) 841
AciI CCGC 7 cut(s) 10, 568, 656, 841, 1472, 1663, 1833
AclWI GGATC 4 cut(s) 368, 919, 1734, 1736
AcoI YGGCCR 2 cut(s) 626, 1791
AcsI RAATTY 4 cut(s) 772, 1555, 1679, 1735
AcuI CTGAAG 3 cut(s) 330, 438, 1446
AcvI CACGTG 1 cut(s) 713
AcyI GRCGYC 1 cut(s) 467
AfaI GTAC 7 cut(s) 406, 434, 645, 654, 963, 1257, 1605
AfiI CCNNNNNNNGG 8 cut(s) 76, 635, 898, 1192, 1248, 1634, 1757, 1811
AflII CTTAAG 1 cut(s) 400
AhlI ACTAGT 2 cut(s) 662, 992
AjnI CCWGG 5 cut(s) 313, 623, 751, 814, 1542
AjuI GAANNNNNNNTTGG 2 cut(s) 370, 402
AluBI AGCT 5 cut(s) 165, 671, 1231, 1525, 1610
AluI AGCT 5 cut(s) 165, 671, 1231, 1525, 1610
Alw21I GWGCWC 1 cut(s) 1273
Alw26I GTCTC 4 cut(s) 129, 788, 1293, 1816
Alw44I GTGCAC 1 cut(s) 1269
AlwI GGATC 4 cut(s) 368, 919, 1734, 1736
AlwNI CAGNNNCTG 3 cut(s) 416, 815, 950
AoxI GGCC 9 cut(s) 16, 316, 599, 621, 626, 735, 783, 1457, 1791
ApaLI GTGCAC 1 cut(s) 1269
ApeKI GCWGC 8 cut(s) 143, 341, 557, 632, 1058, 1505, 1660, 1712
ApoI RAATTY 4 cut(s) 772, 1555, 1679, 1735
AseI ATTAAT 2 cut(s) 384, 1425
Asp700I GAANNNNTTC 1 cut(s) 1050
Asp718I GGTACC 2 cut(s) 432, 1603
AspLEI GCGC 1 cut(s) 469
AspS9I GGNCC 3 cut(s) 317, 755, 784
AsuC2I CCSGG 1 cut(s) 504
AsuHPI GGTGA 3 cut(s) 690, 1712, 1775
AvaII GGWCC 1 cut(s) 755
BaeGI GKGCMC 2 cut(s) 975, 1273
BalI TGGCCA 1 cut(s) 628
BanI GGYRCC 4 cut(s) 432, 466, 970, 1603
BarI GAAGNNNNNNTAC 4 cut(s) 1425, 1457, 1481, 1513
BauI CACGAG 1 cut(s) 234
BbrPI CACGTG 1 cut(s) 713
BbsI GAAGAC 1 cut(s) 58
Bbv12I GWGCWC 1 cut(s) 1273
BbvCI CCTCAGC 1 cut(s) 1746
BbvI GCAGC 8 cut(s) 130, 328, 569, 644, 1045, 1492, 1672, 1699
BccI CCATC 7 cut(s) 527, 727, 935, 1278, 1487, 1634, 1697
BceAI ACGGC 2 cut(s) 555, 1046
BciT130I CCWGG 5 cut(s) 315, 625, 753, 816, 1544
BcnI CCSGG 1 cut(s) 504
BcoDI GTCTC 4 cut(s) 129, 788, 1293, 1816
BcuI ACTAGT 2 cut(s) 662, 992
BfaI CTAG 7 cut(s) 162, 663, 867, 993, 1197, 1409, 1634
BfmI CTRYAG 4 cut(s) 149, 294, 648, 684
BfoI RGCGCY 1 cut(s) 470
BfrI CTTAAG 1 cut(s) 400
BglII AGATCT 1 cut(s) 349
BisI GCNGC 9 cut(s) 144, 342, 558, 633, 1059, 1506, 1661, 1713, 1833
BlsI GCNGC 9 cut(s) 145, 343, 559, 634, 1060, 1507, 1662, 1714, 1834
Bme1390I CCNGG 6 cut(s) 315, 504, 625, 753, 816, 1544
Bme18I GGWCC 1 cut(s) 755
BmgT120I GGNCC 3 cut(s) 317, 755, 784
BmiI GGNNCC 6 cut(s) 434, 468, 972, 1581, 1589, 1605
BmrFI CCNGG 6 cut(s) 315, 504, 625, 753, 816, 1544
BmrI ACTGGG 1 cut(s) 342
BmsI GCATC 9 cut(s) 296, 403, 431, 893, 962, 1186, 1201, 1228, 1724
BmuI ACTGGG 1 cut(s) 342
BpiI GAAGAC 1 cut(s) 58
BpmI CTGGAG 1 cut(s) 927
Bpu10I CCTNAGC 3 cut(s) 672, 780, 1746
BpuEI CTTGAG 1 cut(s) 412
BpuMI CCSGG 1 cut(s) 504
BsaAI YACGTR 2 cut(s) 713, 965
BsaBI GATNNNNATC 2 cut(s) 372, 823
BsaHI GRCGYC 1 cut(s) 467
BsaI GGTCTC 1 cut(s) 1293
BsaJI CCNNGG 7 cut(s) 13, 313, 444, 552, 1038, 1583, 1810
Bsc4I CCNNNNNNNGG 8 cut(s) 76, 635, 898, 1192, 1248, 1634, 1757, 1811
Bse1I ACTGG 3 cut(s) 337, 762, 944
Bse8I GATNNNNATC 2 cut(s) 372, 823
BseBI CCWGG 5 cut(s) 315, 625, 753, 816, 1544
BseDI CCNNGG 7 cut(s) 13, 313, 444, 552, 1038, 1583, 1810
BseGI GGATG 5 cut(s) 422, 538, 1021, 1289, 1498
BseJI GATNNNNATC 2 cut(s) 372, 823
BseLI CCNNNNNNNGG 8 cut(s) 76, 635, 898, 1192, 1248, 1634, 1757, 1811
BseMII CTCAG 6 cut(s) 66, 686, 794, 1229, 1304, 1760
BseNI ACTGG 3 cut(s) 337, 762, 944
BseRI GAGGAG 1 cut(s) 1600
BseSI GKGCMC 2 cut(s) 975, 1273
BseX3I CGGCCG 1 cut(s) 1791
BseXI GCAGC 8 cut(s) 130, 328, 569, 644, 1045, 1492, 1672, 1699
Bsh1236I CGCG 1 cut(s) 841
Bsh1285I CGRYCG 1 cut(s) 1794
BshFI GGCC 9 cut(s) 18, 318, 601, 623, 628, 737, 785, 1459, 1793
BshNI GGYRCC 4 cut(s) 432, 466, 970, 1603
BsiEI CGRYCG 1 cut(s) 1794
BsiHKAI GWGCWC 1 cut(s) 1273
BsiSI CCGG 2 cut(s) 504, 1794
BslI CCNNNNNNNGG 8 cut(s) 76, 635, 898, 1192, 1248, 1634, 1757, 1811
BsmAI GTCTC 4 cut(s) 129, 788, 1293, 1816
BsnI GGCC 9 cut(s) 18, 318, 601, 623, 628, 737, 785, 1459, 1793
Bso31I GGTCTC 1 cut(s) 1293
Bsp1286I GDGCHC 2 cut(s) 975, 1273
Bsp143I GATC 5 cut(s) 349, 373, 911, 1726, 1741
Bsp19I CCATGG 2 cut(s) 552, 1810
BspACI CCGC 7 cut(s) 10, 568, 656, 841, 1472, 1663, 1833
BspANI GGCC 9 cut(s) 18, 318, 601, 623, 628, 737, 785, 1459, 1793
BspCNI CTCAG 6 cut(s) 67, 685, 793, 1228, 1303, 1759
BspFNI CGCG 1 cut(s) 841
BspLI GGNNCC 6 cut(s) 434, 468, 972, 1581, 1589, 1605
BspMAI CTGCAG 1 cut(s) 298
BspPI GGATC 4 cut(s) 368, 919, 1734, 1736
BspT107I GGYRCC 4 cut(s) 432, 466, 970, 1603
BspTI CTTAAG 1 cut(s) 400
BspTNI GGTCTC 1 cut(s) 1293
BsrI ACTGG 3 cut(s) 337, 762, 944
BssECI CCNNGG 7 cut(s) 13, 313, 444, 552, 1038, 1583, 1810
BssMI GATC 5 cut(s) 349, 373, 911, 1726, 1741
BssNI GRCGYC 1 cut(s) 467
BssSI CACGAG 1 cut(s) 234
BssT1I CCWWGG 5 cut(s) 13, 444, 552, 1038, 1810
Bst2BI CACGAG 1 cut(s) 234
Bst2UI CCWGG 5 cut(s) 315, 625, 753, 816, 1544
Bst4CI ACNGT 5 cut(s) 811, 1088, 1355, 1391, 1502
Bst6I CTCTTC 5 cut(s) 83, 202, 487, 1328, 1364
BstACI GRCGYC 1 cut(s) 467
BstAFI CTTAAG 1 cut(s) 400
BstAPI GCANNNNNTGC 2 cut(s) 293, 776
BstBAI YACGTR 2 cut(s) 713, 965
BstC8I GCNNGC 4 cut(s) 339, 630, 986, 1658
BstDEI CTNAG 8 cut(s) 75, 672, 780, 1215, 1290, 1317, 1730, 1746
BstDSI CCRYGG 2 cut(s) 552, 1810
BstENI CCTNNNNNAGG 1 cut(s) 1246
BstF5I GGATG 5 cut(s) 422, 538, 1021, 1289, 1498
BstFNI CGCG 1 cut(s) 841
BstH2I RGCGCY 1 cut(s) 470
BstHHI GCGC 1 cut(s) 469
BstKTI GATC 5 cut(s) 352, 376, 914, 1729, 1744
BstMAI GTCTC 4 cut(s) 129, 788, 1293, 1816
BstMBI GATC 5 cut(s) 349, 373, 911, 1726, 1741
BstMCI CGRYCG 1 cut(s) 1794
BstMWI GCNNNNNNNGC 5 cut(s) 272, 293, 629, 776, 1228
BstNI CCWGG 5 cut(s) 315, 625, 753, 816, 1544
BstNSI RCATGY 1 cut(s) 341
BstSCI CCNGG 6 cut(s) 313, 502, 623, 751, 814, 1542
BstSFI CTRYAG 4 cut(s) 149, 294, 648, 684
BstSLI GKGCMC 2 cut(s) 975, 1273
BstSNI TACGTA 1 cut(s) 965
BstUI CGCG 1 cut(s) 841
BstV1I GCAGC 8 cut(s) 130, 328, 569, 644, 1045, 1492, 1672, 1699
BstV2I GAAGAC 1 cut(s) 58
BstX2I RGATCY 3 cut(s) 349, 911, 1726
BstYI RGATCY 3 cut(s) 349, 911, 1726
BstZI CGGCCG 1 cut(s) 1791
BsuRI GGCC 9 cut(s) 18, 318, 601, 623, 628, 737, 785, 1459, 1793
BtgI CCRYGG 2 cut(s) 552, 1810
BtsCI GGATG 5 cut(s) 422, 538, 1021, 1289, 1498
BtsIMutI CAGTG 2 cut(s) 330, 1093
Cac8I GCNNGC 4 cut(s) 339, 630, 986, 1658
CaiI CAGNNNCTG 3 cut(s) 416, 815, 950
CfoI GCGC 1 cut(s) 469
Cfr13I GGNCC 3 cut(s) 317, 755, 784
Csp6I GTAC 7 cut(s) 405, 433, 644, 653, 962, 1256, 1604
CviAII CATG 5 cut(s) 42, 110, 338, 553, 1811
CviQI GTAC 7 cut(s) 405, 433, 644, 653, 962, 1256, 1604
DdeI CTNAG 8 cut(s) 75, 672, 780, 1215, 1290, 1317, 1730, 1746
DinI GGCGCC 1 cut(s) 468
DpnI GATC 5 cut(s) 351, 375, 913, 1728, 1743
DpnII GATC 5 cut(s) 349, 373, 911, 1726, 1741
EaeI YGGCCR 2 cut(s) 626, 1791
EagI CGGCCG 1 cut(s) 1791
Eam1104I CTCTTC 5 cut(s) 83, 202, 487, 1328, 1364
EarI CTCTTC 5 cut(s) 83, 202, 487, 1328, 1364
EciI GGCGGA 1 cut(s) 557
EclXI CGGCCG 1 cut(s) 1791
Eco105I TACGTA 1 cut(s) 965
Eco130I CCWWGG 5 cut(s) 13, 444, 552, 1038, 1810
Eco147I AGGCCT 3 cut(s) 601, 623, 1459
Eco31I GGTCTC 1 cut(s) 1293
Eco32I GATATC 2 cut(s) 173, 1104
Eco47I GGWCC 1 cut(s) 755
Eco52I CGGCCG 1 cut(s) 1791
Eco57I CTGAAG 3 cut(s) 330, 438, 1446
Eco72I CACGTG 1 cut(s) 713
EcoNI CCTNNNNNAGG 1 cut(s) 1246
EcoO109I RGGNCCY 1 cut(s) 755
EcoRI GAATTC 1 cut(s) 1555
EcoRII CCWGG 5 cut(s) 313, 623, 751, 814, 1542
EcoRV GATATC 2 cut(s) 173, 1104
EcoT14I CCWWGG 5 cut(s) 13, 444, 552, 1038, 1810
EgeI GGCGCC 1 cut(s) 468
EheI GGCGCC 1 cut(s) 468
ErhI CCWWGG 5 cut(s) 13, 444, 552, 1038, 1810
FaeI CATG 5 cut(s) 45, 113, 341, 556, 1814
FalI AAGNNNNNCTT 2 cut(s) 722, 754
FatI CATG 5 cut(s) 41, 109, 337, 552, 1810
FauI CCCGC 1 cut(s) 834
FblI GTMKAC 1 cut(s) 683
Fnu4HI GCNGC 9 cut(s) 144, 342, 558, 633, 1059, 1506, 1661, 1713, 1833
FokI GGATG 5 cut(s) 409, 545, 1028, 1296, 1505
Fsp4HI GCNGC 9 cut(s) 144, 342, 558, 633, 1059, 1506, 1661, 1713, 1833
FspBI CTAG 7 cut(s) 162, 663, 867, 993, 1197, 1409, 1634
GlaI GCGC 1 cut(s) 468
GluI GCNGC 9 cut(s) 144, 342, 558, 633, 1059, 1506, 1661, 1713, 1833
GsuI CTGGAG 1 cut(s) 927
HaeII RGCGCY 1 cut(s) 470
HaeIII GGCC 9 cut(s) 18, 318, 601, 623, 628, 737, 785, 1459, 1793
HapII CCGG 2 cut(s) 504, 1794
HhaI GCGC 1 cut(s) 469
Hin1I GRCGYC 1 cut(s) 467
Hin1II CATG 5 cut(s) 45, 113, 341, 556, 1814
Hin6I GCGC 1 cut(s) 467
HinP1I GCGC 1 cut(s) 467
HincII GTYRAC 1 cut(s) 1132
HindII GTYRAC 1 cut(s) 1132
HpaII CCGG 2 cut(s) 504, 1794
HphI GGTGA 3 cut(s) 690, 1712, 1775
Hpy166II GTNNAC 8 cut(s) 188, 330, 644, 684, 1132, 1256, 1271, 1766
Hpy188III TCNNGA 4 cut(s) 227, 236, 904, 1376
Hpy8I GTNNAC 8 cut(s) 188, 330, 644, 684, 1132, 1256, 1271, 1766
Hpy99I CGWCG 3 cut(s) 180, 228, 841
HpyAV CCTTC 7 cut(s) 330, 446, 457, 768, 933, 1470, 1483
HpyCH4III ACNGT 5 cut(s) 811, 1088, 1355, 1391, 1502
HpyCH4IV ACGT 2 cut(s) 712, 964
HpyCH4V TGCA 9 cut(s) 4, 296, 475, 770, 884, 953, 1177, 1271, 1715
HpyF10VI GCNNNNNNNGC 5 cut(s) 272, 293, 629, 776, 1228
HpyF3I CTNAG 8 cut(s) 75, 672, 780, 1215, 1290, 1317, 1730, 1746
HpySE526I ACGT 2 cut(s) 712, 964
Hsp92I GRCGYC 1 cut(s) 467
Hsp92II CATG 5 cut(s) 45, 113, 341, 556, 1814
HspAI GCGC 1 cut(s) 467
KasI GGCGCC 1 cut(s) 466
KpnI GGTACC 2 cut(s) 436, 1607
Kzo9I GATC 5 cut(s) 349, 373, 911, 1726, 1741
LmnI GCTCC 2 cut(s) 1579, 1587
Lsp1109I GCAGC 8 cut(s) 130, 328, 569, 644, 1045, 1492, 1672, 1699
LweI GCATC 9 cut(s) 296, 403, 431, 893, 962, 1186, 1201, 1228, 1724
MaeI CTAG 7 cut(s) 162, 663, 867, 993, 1197, 1409, 1634
MaeII ACGT 2 cut(s) 712, 964
MaeIII GTNAC 1 cut(s) 1784
MalI GATC 5 cut(s) 351, 375, 913, 1728, 1743
MboI GATC 5 cut(s) 349, 373, 911, 1726, 1741
MflI RGATCY 3 cut(s) 349, 911, 1726
MhlI GDGCHC 2 cut(s) 975, 1273
MlsI TGGCCA 1 cut(s) 628
MluNI TGGCCA 1 cut(s) 628
Mly113I GGCGCC 1 cut(s) 467
MlyI GAGTC 5 cut(s) 47, 473, 790, 1194, 1381
Mox20I TGGCCA 1 cut(s) 628
MroXI GAANNNNTTC 1 cut(s) 1050
MscI TGGCCA 1 cut(s) 628
MseI TTAA 8 cut(s) 384, 401, 704, 918, 1095, 1425, 1533, 1574
Msp20I TGGCCA 1 cut(s) 628
MspA1I CMGCKG 2 cut(s) 1610, 1663
MspCI CTTAAG 1 cut(s) 400
MspI CCGG 2 cut(s) 504, 1794
MspR9I CCNGG 6 cut(s) 315, 504, 625, 753, 816, 1544
MvaI CCWGG 5 cut(s) 315, 625, 753, 816, 1544
MvnI CGCG 1 cut(s) 841
MwoI GCNNNNNNNGC 5 cut(s) 272, 293, 629, 776, 1228
NarI GGCGCC 1 cut(s) 467
NciI CCSGG 1 cut(s) 504
NcoI CCATGG 2 cut(s) 552, 1810
NdeII GATC 5 cut(s) 349, 373, 911, 1726, 1741
NlaIII CATG 5 cut(s) 45, 113, 341, 556, 1814
NlaIV GGNNCC 6 cut(s) 434, 468, 972, 1581, 1589, 1605
NmeAIII GCCGAG 2 cut(s) 1608, 1769
NspI RCATGY 1 cut(s) 341
PaeI GCATGC 1 cut(s) 341
PceI AGGCCT 3 cut(s) 601, 623, 1459
PcsI WCGNNNNNNNCGW 4 cut(s) 133, 175, 220, 232
PdmI GAANNNNTTC 1 cut(s) 1050
PfeI GAWTC 8 cut(s) 230, 239, 395, 819, 845, 1051, 1313, 1598
PfoI TCCNGGA 1 cut(s) 814
PkrI GCNGC 9 cut(s) 145, 343, 559, 634, 1060, 1507, 1662, 1714, 1834
PleI GAGTC 5 cut(s) 46, 473, 790, 1194, 1380
PluTI GGCGCC 1 cut(s) 470
PmaCI CACGTG 1 cut(s) 713
PmlI CACGTG 1 cut(s) 713
PpsI GAGTC 5 cut(s) 46, 473, 790, 1194, 1380
Ppu21I YACGTR 2 cut(s) 713, 965
PpuMI RGGWCCY 1 cut(s) 755
PshBI ATTAAT 2 cut(s) 384, 1425
Psp5II RGGWCCY 1 cut(s) 755
Psp6I CCWGG 5 cut(s) 313, 623, 751, 814, 1542
PspCI CACGTG 1 cut(s) 713
PspGI CCWGG 5 cut(s) 313, 623, 751, 814, 1542
PspN4I GGNNCC 6 cut(s) 434, 468, 972, 1581, 1589, 1605
PspPI GGNCC 3 cut(s) 317, 755, 784
PspPPI RGGWCCY 1 cut(s) 755
PsrI GAACNNNNNNTAC 2 cut(s) 112, 144
PstI CTGCAG 1 cut(s) 298
PstNI CAGNNNCTG 3 cut(s) 416, 815, 950
PsuI RGATCY 3 cut(s) 349, 911, 1726
PvuII CAGCTG 1 cut(s) 1610
RsaI GTAC 7 cut(s) 406, 434, 645, 654, 963, 1257, 1605
RsaNI GTAC 7 cut(s) 405, 433, 644, 653, 962, 1256, 1604
SaqAI TTAA 8 cut(s) 384, 401, 704, 918, 1095, 1425, 1533, 1574
SatI GCNGC 9 cut(s) 144, 342, 558, 633, 1059, 1506, 1661, 1713, 1833
Sau3AI GATC 5 cut(s) 349, 373, 911, 1726, 1741
Sau96I GGNCC 3 cut(s) 317, 755, 784
SchI GAGTC 5 cut(s) 47, 473, 790, 1194, 1381
ScrFI CCNGG 6 cut(s) 315, 504, 625, 753, 816, 1544
SduI GDGCHC 2 cut(s) 975, 1273
SfaNI GCATC 9 cut(s) 296, 403, 431, 893, 962, 1186, 1201, 1228, 1724
SfcI CTRYAG 4 cut(s) 149, 294, 648, 684
SfoI GGCGCC 1 cut(s) 468
SinI GGWCC 1 cut(s) 755
SmlI CTYRAG 2 cut(s) 400, 427
SmoI CTYRAG 2 cut(s) 400, 427
SnaBI TACGTA 1 cut(s) 965
SpeI ACTAGT 2 cut(s) 662, 992
SphI GCATGC 1 cut(s) 341
SseBI AGGCCT 3 cut(s) 601, 623, 1459
SsiI CCGC 7 cut(s) 10, 568, 656, 841, 1472, 1663, 1833
SspDI GGCGCC 1 cut(s) 466
SspMI CTAG 7 cut(s) 162, 663, 867, 993, 1197, 1409, 1634
StuI AGGCCT 3 cut(s) 601, 623, 1459
StyD4I CCNGG 6 cut(s) 313, 502, 623, 751, 814, 1542
StyI CCWWGG 5 cut(s) 13, 444, 552, 1038, 1810
TaaI ACNGT 5 cut(s) 811, 1088, 1355, 1391, 1502
TaiI ACGT 2 cut(s) 715, 967
TaqI TCGA 5 cut(s) 169, 175, 799, 903, 1487
TaqII GACCGA 1 cut(s) 204
TatI WGTACW 1 cut(s) 404
TauI GCSGC 1 cut(s) 1835
TfiI GAWTC 8 cut(s) 230, 239, 395, 819, 845, 1051, 1313, 1598
Tru1I TTAA 8 cut(s) 384, 401, 704, 918, 1095, 1425, 1533, 1574
Tru9I TTAA 8 cut(s) 384, 401, 704, 918, 1095, 1425, 1533, 1574
TscAI CASTG 2 cut(s) 337, 1093
TseI GCWGC 8 cut(s) 143, 341, 557, 632, 1058, 1505, 1660, 1712
TspDTI ATGAA 4 cut(s) 101, 378, 837, 1551
TspGWI ACGGA 3 cut(s) 1361, 1415, 1592
TspRI CASTG 2 cut(s) 337, 1093
Vha464I CTTAAG 1 cut(s) 400
VneI GTGCAC 1 cut(s) 1269
VpaK11BI GGWCC 1 cut(s) 755
VspI ATTAAT 2 cut(s) 384, 1425
XagI CCTNNNNNAGG 1 cut(s) 1246
XapI RAATTY 4 cut(s) 772, 1555, 1679, 1735
XceI RCATGY 1 cut(s) 341
XmiI GTMKAC 1 cut(s) 683
XmnI GAANNNNTTC 1 cut(s) 1050
XspI CTAG 7 cut(s) 162, 663, 867, 993, 1197, 1409, 1634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.