Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0000854

Physical Location & Seq

Genomic Coordinates Forward (+)

6934896 .. 6940028

Gene Structure 5133 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG089700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGTGTGAGTTTTGCAAGAATCCATTTTATGGAGATAATGAGCTGTACATGCATATGTCTACCGAGCATTTTACTTGTCATATATGCCAAAGGCAGCGTCCAGGACAGTATGAGTACTACAGTAACTATGACAACTTGGAGATTCATTTTCAACAAGCGCACTTCTTATGCAAGGATGATGCCTGCCTAACAAAAAAATTTGTTGTTTTTGCAACTGAATCTGAAATGAAGAGGCATAATGCCAAAGAACATGGAGGGAACATGTCTCGCTCCCGGCGTAATGCTGCTCTTCAGATACCAATAAGCTTCCGGTGTAGGAGAAGTAATGAGGAAGATCATCATGGACCCCATAGTGGAGGACATGTTTCTGATGTTGATGCTGAAGATAATCGACTTTTCCTGACTGTTCAAGCTAGTGTTGATACAGCCAATGCAGAAAGGTTTCATAATACATCCTCTAGTGTCCAAGCAGTTTTTGATCGTCGAAGAGCAAGTGACTCTGTGATTATTGCTGGCCGTTTTGAGTCATTAGCTACTACAGAAACTGAGTCATCTGTAAGATGCTCTAATGCATCAAGAGAAAACTCTCGTAATGTACTAGCAGAAGAATCAGCCTTCCCTCCACTTCCTCTGGCTCAAAGTAGCAGGCGACAGAAGTTTAGAAATGGTTCCGAACGGATGGATGGTAGCACAATGGCATCTCGAGTTCGTCGCCTTAATACCGTAAATGTCCTTAATTCTTCTTCAGCTTGGCCAACAGCCAGGCGTCAACCTAAATCATCTGCCAGTAGTTCTCACCAGTTATCATCATCTAGTTCTTCTGTATTTTCCCAGAGTAATACTGCAACTATTAATAGGACTATGCCTTCTGGATATGCAAGCTCTGGTCCAGTGAGACAAGCTGCAGCTAATGGTTTTGTATCATCCAATTTTCTTAGCACAGGGAAGTCACCTAGCACTAGTAAGGTTGGCCACTCTACTTCAGCTCCAAGCCTTGTTGAGAGAGGATCTATAGACTCTGATTTTCCTACTGCATCTGCTACTCGAACTAATAGAGAACCTGCAAATAGTCAGACAATAATACCCAAGGTCGGAGATGTTCAGACTGCCAACAAGTCCCTTGTAGAAAAAATCCGTGATGCTTTAGAATTTGATGAGAGCAAATTCACCGCATTTAAAGAAATATCTGGAAAGTACCGCAAGGATCTAATCAACACCGGGGAATATCTGGCCTGTGTGGACCAGTTTGGCCTGTCACACTTGGTTCTTGAGCTAGCTCAACTGTGTCCTGATGCTGAGAAGCGAAGAGAGCTTGTTGAGACTTACAATTTCAATATGAAGAGCAGTCGTTCTCATGGAATCAATTTGAGTATTGGTGGTGGCAAGTCAAAGAGCAGTTCCAAGAAAGGCAAGGAAAAATGTGTAGATAATGGGATCAGTAGTTCAAAAGATGCTTTGAAGTTGAATTGTAAACCTCCTGTCGAAGATGCAGCGGTCGTATTGAAGAATGATCATTGCTGCAGCAAAGGAAAGTCAAAGATATCAGTTGAGGATGAACAGATCAACCTGGATTCTGGGAATCATATGCCGATGGGTCAGAATGGTTCTCAGTCAGCTGGTGGCAGCTCAAAGAAAAATTTGGGAAAAGGAGCTAATAAGCAACAAAAGAAGGTTCCCAAGTTTCTTAGAAACCGTCTTGGTGATGATGCTGTAGCACTTGCAGAACTTGGTGATGCTGAAACCGGTCCTGACCTGATTGAAGAAAAAACAGATACAGACAAGGATCCCCCCGAAGGGTTGCCAGTTCGTGGTGTTTGGCAAAATGGAGGTGGCCATAGACTTGTGAAATTGACCATGAGAAACCCTCCAAAACGAGGAGTTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

628

Amino Acids

68.84

Weight (kDa)

9.06

Isoelectric Point (pI)

53.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C2H2_13	PF23230	23 - 79	1.9e-15	C2H2-type zinc finger
PAH_ZNF598	PF23202	368 - 443	6.5e-22	ZNF598 PAH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000854)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47090 AT2G47090 AT2G47090 AT2G47090 AT2G47090 AT3G62240
fragaria_vesca	FvH4_3g07600 FvH4_6g08350 FvH4_6g08350 FvH4_6g08350 FvH4_6g08350 FvH4_7g03760 FvH4_7g03760 FvH4_7g03760
malus_domestica	MD02G1277600.v1.1 MD04G1187900.v1.1 MD07G1045700.v1.1
prunus_persica	Prupe.2G042900_v2.0.a1 Prupe.6G306300_v2.0.a1 Prupe.6G306300_v2.0.a1 Prupe.6G306300_v2.0.a1 Prupe.6G306300_v2.0.a1 Prupe.6G306300_v2.0.a1 Prupe.6G306300_v2.0.a1
pyrus_communis	pycom02g23760 pycom02g23770 pycom04g16610 pycom04g16640 pycom07g03260 pycom07g03270
rosa_chinensis	RchiOBHm_Chr1g0326951 RchiOBHm_Chr3g0458251 RchiOBHm_Chr5g0011091
rosa_laevigata	RLG00000025171 RLG00000030049 RLG00000031809
rosa_multiflora	Rmu_co8031236.1_g000001 Rmu_co8098122.1_g000001 Rmu_co8217558.1_g000001 Rmu_co8502817.1_g000001 Rmu_sc0000795.1_g000001 Rmu_sc0003315.1_g000001 Rmu_sc0005999.1_g000013 Rmu_sc0007338.1_g000004
rosa_roxburghii	Rroxscaffold_1G00065320 Rroxscaffold_4G00323480 Rroxscaffold_6G00421200
rosa_rugosa	Rorug01G0062400 Rorug01G0062500 Rorug03G0025600 Rorug03G0025700
rosa_samantha	Rh1AG079500 Rh1BG063700 Rh1CG077100 Rh1DG083600 Rh3AG086400 Rh3BG089100 Rh3CG089700 Rh3DG090200 Rh5AG087400 Rh5BG082200 Rh5CG095000 Rh5DG081800
rosa_wichuraiana	Rw0G000180 Rw0G017770 Rw1G006310 Rw3G007330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1069
AccB7I	CCANNNNNTGG	2 cut(s)	29, 1808
AccI	GTMKAC	1 cut(s)	59
AciI	CCGC	3 cut(s)	1170, 1198, 1493
AclWI	GGATC	5 cut(s)	1015, 1212, 1442, 1778, 1791
AcoI	YGGCCR	4 cut(s)	514, 752, 970, 1831
AcsI	RAATTY	4 cut(s)	197, 1148, 1163, 1636
AcuI	CTGAAG	4 cut(s)	275, 402, 729, 966
AcyI	GRCGYC	1 cut(s)	766
AfaI	GTAC	4 cut(s)	47, 116, 597, 1196
AfiI	CCNNNNNNNGG	7 cut(s)	29, 353, 1091, 1793, 1794, 1808, 1874
AflIII	ACRYGT	2 cut(s)	261, 361
AgeI	ACCGGT	1 cut(s)	1742
AgsI	TTSAA	8 cut(s)	152, 410, 1333, 1446, 1459, 1465, 1504, 1760
AhlI	ACTAGT	1 cut(s)	959
AjnI	CCWGG	3 cut(s)	100, 761, 1566
AloI	GAACNNNNNNTCC	2 cut(s)	1426, 1458
Alw26I	GTCTC	3 cut(s)	270, 889, 1313
AlwI	GGATC	5 cut(s)	1015, 1212, 1442, 1778, 1791
AlwNI	CAGNNNCTG	1 cut(s)	545
Ama87I	CYCGRG	1 cut(s)	702
AoxI	GGCC	6 cut(s)	514, 752, 970, 1230, 1249, 1831
ApeKI	GCWGC	8 cut(s)	94, 284, 902, 905, 1490, 1518, 1521, 1623
ApoI	RAATTY	4 cut(s)	197, 1148, 1163, 1636
ArsI	GACNNNNNNTTYG	2 cut(s)	82, 114
AseI	ATTAAT	1 cut(s)	852
AsiGI	ACCGGT	1 cut(s)	1742
Asp700I	GAANNNNTTC	2 cut(s)	441, 667
AspLEI	GCGC	1 cut(s)	160
AspS9I	GGNCC	4 cut(s)	344, 887, 1240, 1745
AsuC2I	CCSGG	2 cut(s)	274, 1219
AsuHPI	GGTGA	5 cut(s)	788, 942, 1159, 1712, 1742
AsuNHI	GCTAGC	1 cut(s)	1273
AvaI	CYCGRG	1 cut(s)	702
AvaII	GGWCC	4 cut(s)	344, 887, 1240, 1745
BalI	TGGCCA	3 cut(s)	754, 972, 1833
BamHI	GGATCC	1 cut(s)	1783
BbvI	GCAGC	8 cut(s)	106, 271, 889, 917, 1502, 1505, 1533, 1635
BccI	CCATC	3 cut(s)	673, 677, 1585
BceAI	ACGGC	1 cut(s)	501
BciT130I	CCWGG	3 cut(s)	102, 763, 1568
BclI	TGATCA	1 cut(s)	1510
BcnI	CCSGG	2 cut(s)	274, 1219
BcoDI	GTCTC	3 cut(s)	270, 889, 1313
BcuI	ACTAGT	1 cut(s)	959
BfaI	CTAG	7 cut(s)	414, 459, 599, 813, 954, 960, 1274
BfmI	CTRYAG	6 cut(s)	118, 537, 903, 1011, 1519, 1710
BfuAI	ACCTGC	1 cut(s)	1069
BisI	GCNGC	8 cut(s)	95, 285, 903, 906, 1491, 1519, 1522, 1624
BlsI	GCNGC	8 cut(s)	96, 286, 904, 907, 1492, 1520, 1523, 1625
BmcAI	AGTACT	1 cut(s)	116
Bme1390I	CCNGG	5 cut(s)	102, 274, 763, 1219, 1568
Bme18I	GGWCC	4 cut(s)	344, 887, 1240, 1745
BmeT110I	CYCGRG	1 cut(s)	702
BmgT120I	GGNCC	4 cut(s)	344, 887, 1240, 1745
BmiI	GGNNCC	4 cut(s)	346, 670, 1674, 1785
BmrFI	CCNGG	5 cut(s)	102, 274, 763, 1219, 1568
BmtI	GCTAGC	1 cut(s)	1277
BplI	GAGNNNNNCTC	2 cut(s)	1849, 1881
BpuEI	CTTGAG	1 cut(s)	1289
BpuMI	CCSGG	2 cut(s)	274, 1219
BsaHI	GRCGYC	1 cut(s)	766
BsaJI	CCNNGG	2 cut(s)	1086, 1218
BsaWI	WCCGGW	2 cut(s)	309, 1742
BsaXI	ACNNNNNCTCC	4 cut(s)	348, 378, 970, 1000
Bsc4I	CCNNNNNNNGG	7 cut(s)	29, 353, 1091, 1793, 1794, 1808, 1874
Bse118I	RCCGGY	1 cut(s)	1742
Bse1I	ACTGG	5 cut(s)	786, 799, 890, 1243, 1802
Bse3DI	GCAATG	1 cut(s)	1513
BseBI	CCWGG	3 cut(s)	102, 763, 1568
BseDI	CCNNGG	2 cut(s)	1086, 1218
BseGI	GGATG	6 cut(s)	181, 452, 684, 688, 923, 1558
BseLI	CCNNNNNNNGG	7 cut(s)	29, 353, 1091, 1793, 1794, 1808, 1874
BseMI	GCAATG	1 cut(s)	1513
BseMII	CTCAG	3 cut(s)	537, 1287, 1622
BseNI	ACTGG	5 cut(s)	786, 799, 890, 1243, 1802
BseXI	GCAGC	8 cut(s)	106, 271, 889, 917, 1502, 1505, 1533, 1635
Bsh1285I	CGRYCG	1 cut(s)	1497
BshFI	GGCC	6 cut(s)	516, 754, 972, 1232, 1251, 1833
BshTI	ACCGGT	1 cut(s)	1742
BsiEI	CGRYCG	1 cut(s)	1497
BsiHKCI	CYCGRG	1 cut(s)	702
BsiSI	CCGG	4 cut(s)	274, 310, 1218, 1743
BslFI	GGGAC	1 cut(s)	1102
BslI	CCNNNNNNNGG	7 cut(s)	29, 353, 1091, 1793, 1794, 1808, 1874
BsmAI	GTCTC	3 cut(s)	270, 889, 1313
BsmFI	GGGAC	1 cut(s)	1102
BsnI	GGCC	6 cut(s)	516, 754, 972, 1232, 1251, 1833
BsoBI	CYCGRG	1 cut(s)	702
Bsp1407I	TGTACA	1 cut(s)	45
Bsp143I	GATC	8 cut(s)	334, 478, 1007, 1204, 1434, 1510, 1560, 1783
BspACI	CCGC	3 cut(s)	1170, 1198, 1493
BspANI	GGCC	6 cut(s)	516, 754, 972, 1232, 1251, 1833
BspCNI	CTCAG	3 cut(s)	538, 1288, 1621
BspLI	GGNNCC	4 cut(s)	346, 670, 1674, 1785
BspMAI	CTGCAG	2 cut(s)	907, 1523
BspMI	ACCTGC	1 cut(s)	1069
BspOI	GCTAGC	1 cut(s)	1277
BspPI	GGATC	5 cut(s)	1015, 1212, 1442, 1778, 1791
BspQI	GCTCTTC	3 cut(s)	294, 481, 1334
BsrDI	GCAATG	1 cut(s)	1513
BsrFI	RCCGGY	1 cut(s)	1742
BsrGI	TGTACA	1 cut(s)	45
BsrI	ACTGG	5 cut(s)	786, 799, 890, 1243, 1802
BssAI	RCCGGY	1 cut(s)	1742
BssECI	CCNNGG	2 cut(s)	1086, 1218
BssMI	GATC	8 cut(s)	334, 478, 1007, 1204, 1434, 1510, 1560, 1783
BssNI	GRCGYC	1 cut(s)	766
BssT1I	CCWWGG	1 cut(s)	1086
Bst2UI	CCWGG	3 cut(s)	102, 763, 1568
Bst4CI	ACNGT	6 cut(s)	108, 122, 406, 724, 1284, 1694
Bst6I	CTCTTC	5 cut(s)	224, 294, 481, 1300, 1334
BstACI	GRCGYC	1 cut(s)	766
BstAUI	TGTACA	1 cut(s)	45
BstC8I	GCNNGC	5 cut(s)	184, 514, 647, 880, 1275
BstDEI	CTNAG	5 cut(s)	546, 935, 1296, 1608, 1685
BstF5I	GGATG	6 cut(s)	181, 452, 684, 688, 923, 1558
BstHHI	GCGC	1 cut(s)	160
BstKTI	GATC	8 cut(s)	337, 481, 1010, 1207, 1437, 1513, 1563, 1786
BstMAI	GTCTC	3 cut(s)	270, 889, 1313
BstMBI	GATC	8 cut(s)	334, 478, 1007, 1204, 1434, 1510, 1560, 1783
BstMCI	CGRYCG	1 cut(s)	1497
BstMWI	GCNNNNNNNGC	2 cut(s)	49, 1309
BstNI	CCWGG	3 cut(s)	102, 763, 1568
BstNSI	RCATGY	3 cut(s)	52, 265, 365
BstSCI	CCNGG	5 cut(s)	100, 272, 761, 1217, 1566
BstSFI	CTRYAG	6 cut(s)	118, 537, 903, 1011, 1519, 1710
BstV1I	GCAGC	8 cut(s)	106, 271, 889, 917, 1502, 1505, 1533, 1635
BstX2I	RGATCY	3 cut(s)	1007, 1204, 1783
BstYI	RGATCY	3 cut(s)	1007, 1204, 1783
BsuRI	GGCC	6 cut(s)	516, 754, 972, 1232, 1251, 1833
BtsCI	GGATG	6 cut(s)	181, 452, 684, 688, 923, 1558
BtsIMutI	CAGTG	1 cut(s)	897
BveI	ACCTGC	1 cut(s)	1069
Cac8I	GCNNGC	5 cut(s)	184, 514, 647, 880, 1275
CaiI	CAGNNNCTG	1 cut(s)	545
CfoI	GCGC	1 cut(s)	160
Cfr10I	RCCGGY	1 cut(s)	1742
Cfr13I	GGNCC	4 cut(s)	344, 887, 1240, 1745
CseI	GACGC	2 cut(s)	86, 755
Csp6I	GTAC	4 cut(s)	46, 115, 596, 1195
CspAI	ACCGGT	1 cut(s)	1742
CviAII	CATG	7 cut(s)	49, 251, 262, 341, 362, 1355, 1855
CviQI	GTAC	4 cut(s)	46, 115, 596, 1195
DdeI	CTNAG	5 cut(s)	546, 935, 1296, 1608, 1685
DpnI	GATC	8 cut(s)	336, 480, 1009, 1206, 1436, 1512, 1562, 1785
DpnII	GATC	8 cut(s)	334, 478, 1007, 1204, 1434, 1510, 1560, 1783
DraI	TTTAAA	1 cut(s)	1177
EaeI	YGGCCR	4 cut(s)	514, 752, 970, 1831
Eam1104I	CTCTTC	5 cut(s)	224, 294, 481, 1300, 1334
EarI	CTCTTC	5 cut(s)	224, 294, 481, 1300, 1334
Eco130I	CCWWGG	1 cut(s)	1086
Eco32I	GATATC	1 cut(s)	1542
Eco47I	GGWCC	4 cut(s)	344, 887, 1240, 1745
Eco57I	CTGAAG	4 cut(s)	275, 402, 729, 966
Eco88I	CYCGRG	1 cut(s)	702
EcoRII	CCWGG	3 cut(s)	100, 761, 1566
EcoRV	GATATC	1 cut(s)	1542
EcoT14I	CCWWGG	1 cut(s)	1086
EcoT22I	ATGCAT	2 cut(s)	54, 574
ErhI	CCWWGG	1 cut(s)	1086
FaeI	CATG	7 cut(s)	52, 254, 265, 344, 365, 1358, 1858
FaqI	GGGAC	1 cut(s)	1102
FatI	CATG	7 cut(s)	48, 250, 261, 340, 361, 1354, 1854
FauNDI	CATATG	2 cut(s)	54, 1584
FbaI	TGATCA	1 cut(s)	1510
FblI	GTMKAC	1 cut(s)	59
Fnu4HI	GCNGC	8 cut(s)	95, 285, 903, 906, 1491, 1519, 1522, 1624
FokI	GGATG	6 cut(s)	188, 439, 691, 695, 910, 1565
Fsp4HI	GCNGC	8 cut(s)	95, 285, 903, 906, 1491, 1519, 1522, 1624
FspBI	CTAG	7 cut(s)	414, 459, 599, 813, 954, 960, 1274
GlaI	GCGC	1 cut(s)	159
GluI	GCNGC	8 cut(s)	95, 285, 903, 906, 1491, 1519, 1522, 1624
HaeIII	GGCC	6 cut(s)	516, 754, 972, 1232, 1251, 1833
HapII	CCGG	4 cut(s)	274, 310, 1218, 1743
HgaI	GACGC	2 cut(s)	86, 755
HhaI	GCGC	1 cut(s)	160
Hin1I	GRCGYC	1 cut(s)	766
Hin1II	CATG	7 cut(s)	52, 254, 265, 344, 365, 1358, 1858
Hin6I	GCGC	1 cut(s)	158
HinP1I	GCGC	1 cut(s)	158
HincII	GTYRAC	1 cut(s)	770
HindII	GTYRAC	1 cut(s)	770
HindIII	AAGCTT	1 cut(s)	304
HpaII	CCGG	4 cut(s)	274, 310, 1218, 1743
HphI	GGTGA	5 cut(s)	788, 942, 1159, 1712, 1742
Hpy166II	GTNNAC	4 cut(s)	60, 770, 1240, 1472
Hpy188III	TCNNGA	8 cut(s)	400, 576, 702, 870, 1188, 1268, 1289, 1748
Hpy8I	GTNNAC	4 cut(s)	60, 770, 1240, 1472
Hpy99I	CGWCG	2 cut(s)	486, 714
HpyAV	CCTTC	4 cut(s)	625, 876, 1663, 1787
HpyCH4III	ACNGT	6 cut(s)	108, 122, 406, 724, 1284, 1694
HpyF10VI	GCNNNNNNNGC	2 cut(s)	49, 1309
HpyF3I	CTNAG	5 cut(s)	546, 935, 1296, 1608, 1685
Hsp92I	GRCGYC	1 cut(s)	766
Hsp92II	CATG	7 cut(s)	52, 254, 265, 344, 365, 1358, 1858
HspAI	GCGC	1 cut(s)	158
Ksp22I	TGATCA	1 cut(s)	1510
Kzo9I	GATC	8 cut(s)	334, 478, 1007, 1204, 1434, 1510, 1560, 1783
LguI	GCTCTTC	3 cut(s)	294, 481, 1334
LmnI	GCTCC	3 cut(s)	275, 991, 1649
Lsp1109I	GCAGC	8 cut(s)	106, 271, 889, 917, 1502, 1505, 1533, 1635
MaeI	CTAG	7 cut(s)	414, 459, 599, 813, 954, 960, 1274
MaeIII	GTNAC	4 cut(s)	122, 494, 948, 1254
MalI	GATC	8 cut(s)	336, 480, 1009, 1206, 1436, 1512, 1562, 1785
MboI	GATC	8 cut(s)	334, 478, 1007, 1204, 1434, 1510, 1560, 1783
MflI	RGATCY	3 cut(s)	1007, 1204, 1783
MlsI	TGGCCA	3 cut(s)	754, 972, 1833
MluNI	TGGCCA	3 cut(s)	754, 972, 1833
MlyI	GAGTC	4 cut(s)	491, 533, 557, 1010
MmeI	TCCRAC	1 cut(s)	1072
Mox20I	TGGCCA	3 cut(s)	754, 972, 1833
Mph1103I	ATGCAT	2 cut(s)	54, 574
MroXI	GAANNNNTTC	2 cut(s)	441, 667
MscI	TGGCCA	3 cut(s)	754, 972, 1833
MseI	TTAA	4 cut(s)	717, 735, 852, 1176
MslI	CAYNNNNRTG	1 cut(s)	53
Msp20I	TGGCCA	3 cut(s)	754, 972, 1833
MspA1I	CMGCKG	2 cut(s)	1493, 1616
MspI	CCGG	4 cut(s)	274, 310, 1218, 1743
MspR9I	CCNGG	5 cut(s)	102, 274, 763, 1219, 1568
MvaI	CCWGG	3 cut(s)	102, 763, 1568
MwoI	GCNNNNNNNGC	2 cut(s)	49, 1309
NciI	CCSGG	2 cut(s)	274, 1219
NdeI	CATATG	2 cut(s)	54, 1584
NdeII	GATC	8 cut(s)	334, 478, 1007, 1204, 1434, 1510, 1560, 1783
NheI	GCTAGC	1 cut(s)	1273
NlaIII	CATG	7 cut(s)	52, 254, 265, 344, 365, 1358, 1858
NlaIV	GGNNCC	4 cut(s)	346, 670, 1674, 1785
NmuCI	GTSAC	3 cut(s)	494, 948, 1254
NsiI	ATGCAT	2 cut(s)	54, 574
NspI	RCATGY	3 cut(s)	52, 265, 365
PaeR7I	CTCGAG	1 cut(s)	702
PciI	ACATGT	2 cut(s)	261, 361
PciSI	GCTCTTC	3 cut(s)	294, 481, 1334
PcsI	WCGNNNNNNNCGW	1 cut(s)	274
PdmI	GAANNNNTTC	2 cut(s)	441, 667
PfeI	GAWTC	7 cut(s)	19, 142, 218, 608, 1359, 1571, 1579
PflMI	CCANNNNNTGG	2 cut(s)	29, 1808
PfoI	TCCNGGA	1 cut(s)	100
PinAI	ACCGGT	1 cut(s)	1742
PkrI	GCNGC	8 cut(s)	96, 286, 904, 907, 1492, 1520, 1523, 1625
PleI	GAGTC	4 cut(s)	491, 532, 556, 1010
PpsI	GAGTC	4 cut(s)	491, 532, 556, 1010
PscI	ACATGT	2 cut(s)	261, 361
PshBI	ATTAAT	1 cut(s)	852
Psp6I	CCWGG	3 cut(s)	100, 761, 1566
PspGI	CCWGG	3 cut(s)	100, 761, 1566
PspN4I	GGNNCC	4 cut(s)	346, 670, 1674, 1785
PspPI	GGNCC	4 cut(s)	344, 887, 1240, 1745
PstI	CTGCAG	2 cut(s)	907, 1523
PstNI	CAGNNNCTG	1 cut(s)	545
PsuI	RGATCY	3 cut(s)	1007, 1204, 1783
PvuII	CAGCTG	1 cut(s)	1616
RsaI	GTAC	4 cut(s)	47, 116, 597, 1196
RsaNI	GTAC	4 cut(s)	46, 115, 596, 1195
RseI	CAYNNNNRTG	1 cut(s)	53
SapI	GCTCTTC	3 cut(s)	294, 481, 1334
SaqAI	TTAA	4 cut(s)	717, 735, 852, 1176
SatI	GCNGC	8 cut(s)	95, 285, 903, 906, 1491, 1519, 1522, 1624
Sau3AI	GATC	8 cut(s)	334, 478, 1007, 1204, 1434, 1510, 1560, 1783
Sau96I	GGNCC	4 cut(s)	344, 887, 1240, 1745
ScaI	AGTACT	1 cut(s)	116
SchI	GAGTC	4 cut(s)	491, 533, 557, 1010
ScrFI	CCNGG	5 cut(s)	102, 274, 763, 1219, 1568
SfcI	CTRYAG	6 cut(s)	118, 537, 903, 1011, 1519, 1710
Sfr274I	CTCGAG	1 cut(s)	702
SinI	GGWCC	4 cut(s)	344, 887, 1240, 1745
SlaI	CTCGAG	1 cut(s)	702
SmiMI	CAYNNNNRTG	1 cut(s)	53
SmlI	CTYRAG	2 cut(s)	702, 1268
SmoI	CTYRAG	2 cut(s)	702, 1268
SpeI	ACTAGT	1 cut(s)	959
SsiI	CCGC	3 cut(s)	1170, 1198, 1493
SspMI	CTAG	7 cut(s)	414, 459, 599, 813, 954, 960, 1274
StyD4I	CCNGG	5 cut(s)	100, 272, 761, 1217, 1566
StyI	CCWWGG	1 cut(s)	1086
TaaI	ACNGT	6 cut(s)	108, 122, 406, 724, 1284, 1694
TaqI	TCGA	5 cut(s)	391, 484, 703, 1045, 1482
TatI	WGTACW	3 cut(s)	45, 114, 595
TfiI	GAWTC	7 cut(s)	19, 142, 218, 608, 1359, 1571, 1579
Tru1I	TTAA	4 cut(s)	717, 735, 852, 1176
Tru9I	TTAA	4 cut(s)	717, 735, 852, 1176
TscAI	CASTG	1 cut(s)	897
TseFI	GTSAC	3 cut(s)	494, 948, 1254
TseI	GCWGC	8 cut(s)	94, 284, 902, 905, 1490, 1518, 1521, 1623
Tsp45I	GTSAC	3 cut(s)	494, 948, 1254
TspDTI	ATGAA	5 cut(s)	134, 242, 434, 1352, 1569
TspGWI	ACGGA	2 cut(s)	691, 1124
TspRI	CASTG	1 cut(s)	897
Van91I	CCANNNNNTGG	2 cut(s)	29, 1808
VpaK11BI	GGWCC	4 cut(s)	344, 887, 1240, 1745
VspI	ATTAAT	1 cut(s)	852
XapI	RAATTY	4 cut(s)	197, 1148, 1163, 1636
XceI	RCATGY	3 cut(s)	52, 265, 365
XhoI	CTCGAG	1 cut(s)	702
XmiI	GTMKAC	1 cut(s)	59
XmnI	GAANNNNTTC	2 cut(s)	441, 667
XspI	CTAG	7 cut(s)	414, 459, 599, 813, 954, 960, 1274
ZrmI	AGTACT	1 cut(s)	116
Zsp2I	ATGCAT	2 cut(s)	54, 574

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.