Rw1G006310

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000854
Physical Location & Seq
Reverse (-)
12864631 .. 12868851
4221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G006310.1

Sequence Viewer

Length: 2001 bp
ATGGGGCATCCTATGTGTGAATTCTGCAGAACTCCATTCTATGGCGATAATGAACTATACGCCCACATGGGTACCGAGCACTACAAATGTCATTTATGCCATAGTCCTGGACAATATGAATATTATAGGAACTATGATGATCTCGAGATGCACTTCCGCCAAGGCCATTTCCTATGTGAAGATGAGTCATGTCTTGCGAAAAAGTTTATTGTCTTCCAATCTGAGGCAGAAATGAAGAGGCACAATACTATTGAACATGGGGGGCGTATGTCTCGTTCCAAGCGTAATGCTGCTCTCCAGATACCAACTAGCTTTCGATATCGACGAGGTAGTGAACAAGATAATAGGCGTGGAAGAGGTCGGTCATTTCGTCGTGAATCTCGTGATTCTTCTGATAATCAACTTTCTATGGCGATTCAAGCAAGTTTGGAGGCATCTACTGCAGATGATAGCACATTCCATGGTCCTTCCTCGTCCACTGGGCATGCTGCTTCAGATCTTGGAGATACAAGTGATATTGATCCAATCATTAATTCATTTGAATCCTTAAGTACAACAGATGCTGAAGCATCCTCAAGGTACCTTCAAGCCTTGGGGCAAAGTTCTGGGAAGGCGCCTTTGCAGGACTCTTCCTTTCCTCCCCTCGCACCTGGAAGCAGTCAATCAACACCTATCTCGGATGGTTTGCCTAATAACACCATGGCAGCACATCTCCGCCGTCAAAACAATCGCAAGGTGGCTGTTAGGCCTGTTATTAGTTCTGGTCAGGCCTGGCCATCAGCAGGGCGTGTACCTGTAGTACCGCCTACTAGTTCAGCTCAGGCGTGGCCTACAGCACAGGTTTCACCTTTAATATCACGTGGTTCTGGTCAGAACAAGATGGCCTTTGGGAATAGACCAGGACCTTCCAGTTATGCAAATTCTGCTCAGGCCCAAGTTGAGACTCGACAGACAACAGTTCCTGGATTCTCATCATCTGGTTCTTCGCGGGATTCATTCAACACCAACTCTGCTAGGATTAGCCATTCTGCATCTGCCCCTAATTTGGTCGAGAATGGATCTGTTAAACCTACCATCTCCGATTTCCCTCCAGTTTCTGTAGCACAAGTACGTAAGGTGCCCTCAATTAGCCAGCCAACTAGTCAGCCTGTATTGAAAGTGGATGTTCAAACTGCTAACAAGTCCTTGGTGGAAAAGATTCGTGCTGCCGTTGAGTTTGACGAAGAAAAATACAGTCTTTTTAAGGAGATATCTGGGCAGTATCGTCAGGGTTTAGTTGACACAGAAGTATATTTAGATTTTGTTCGGCAGTATGGCTTGTTGCATCTTGTCCTTGACTTGGCTAGACTCTGCCCTGATGCTCAGAAGCAGAGAGAGCTGATTGATGCCTACAATAAGAGTGTACGAAACAATGGTGCACAAGAGAATGGATGGTCTCAGGGAAGTGTCCGATTGAAAGATTCTAAGAAAGGTAAAGGGAAGAGTTCAGAAACGGAAAACAGTAAGGCTAAAGGGAAGAGTCATGAAGTGGAAAACAGTAGTTCAAAGGACACACTAGCAGATAGCATAATTAATTCTGTAAGGGAACTTCAATCAAACAACAGGCCTTCAGAAGAAGCGGTTGAGGTGTTGTCGAAGGATGGCTACCGTGCTGCCAAAGGCAAATCAAAGCTGATAGTTAATGAACGCCAGGAGGAATTGAATTCTCGCAATCAAGCCTTAACGGAGCCGAGGAGCCAAAAGGATTCGGTGCCAGCTGTTAGTGGATCTAATCCACATCTAGGAGATGGTGGTGGAGGAAGCAAGCAGCGGAAGAAAACCTCAAAATTCCATAGAGTTCGCTTGGGTGATGGCTCTGCTGCATCTCTCTTGGATCTTAGAAATTCTGATCCTCAGCCAGATGACGGGGGTGAACAATTAGATGAGAGCAGTAACTCAGCCGGAGGGTTGCCTGTCCATGGTGTTTGGAGACACAAAGCCGCCAATAAACTTTTTAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

666

Amino Acids

72.73

Weight (kDa)

8.9

Isoelectric Point (pI)

54.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C2H2_13 PF23230 27 - 81 2e-15 C2H2-type zinc finger
PAH_ZNF598 PF23202 390 - 465 4.8e-20 ZNF598 PAH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 71, 579
AccB1I GGYRCC 5 cut(s) 71, 579, 613, 1117, 1750
AccB7I CCANNNNNTGG 1 cut(s) 41
AccII CGCG 1 cut(s) 988
AciI CCGC 7 cut(s) 157, 715, 803, 988, 1619, 1810, 1980
AclWI GGATC 5 cut(s) 515, 1066, 1774, 1881, 1883
AcoI YGGCCR 1 cut(s) 773
AcsI RAATTY 5 cut(s) 20, 919, 1702, 1826, 1882
AcuI CTGAAG 3 cut(s) 477, 585, 1593
AcvI CACGTG 1 cut(s) 860
AcyI GRCGYC 1 cut(s) 614
AfaI GTAC 7 cut(s) 73, 553, 581, 792, 801, 1110, 1404
AfiI CCNNNNNNNGG 8 cut(s) 41, 223, 782, 1045, 1339, 1781, 1904, 1958
AflII CTTAAG 1 cut(s) 547
AhlI ACTAGT 2 cut(s) 809, 1139
AjnI CCWGG 6 cut(s) 106, 649, 770, 898, 961, 1689
AjuI GAANNNNNNNTTGG 2 cut(s) 517, 549
AluBI AGCT 5 cut(s) 312, 818, 1378, 1672, 1757
AluI AGCT 5 cut(s) 312, 818, 1378, 1672, 1757
Alw21I GWGCWC 2 cut(s) 81, 1420
Alw26I GTCTC 4 cut(s) 276, 935, 1440, 1963
Alw44I GTGCAC 1 cut(s) 1416
AlwI GGATC 5 cut(s) 515, 1066, 1774, 1881, 1883
AlwNI CAGNNNCTG 3 cut(s) 563, 962, 1097
Ama87I CYCGRG 1 cut(s) 143
AoxI GGCC 8 cut(s) 163, 746, 768, 773, 827, 882, 930, 1604
ApaLI GTGCAC 1 cut(s) 1416
ApeKI GCWGC 7 cut(s) 290, 488, 704, 1205, 1652, 1807, 1859
ApoI RAATTY 5 cut(s) 20, 919, 1702, 1826, 1882
AseI ATTAAT 2 cut(s) 531, 1572
Asp700I GAANNNNTTC 1 cut(s) 1197
Asp718I GGTACC 2 cut(s) 71, 579
AspLEI GCGC 1 cut(s) 616
AspS9I GGNCC 3 cut(s) 464, 902, 931
AsuHPI GGTGA 3 cut(s) 837, 1859, 1922
AvaI CYCGRG 1 cut(s) 143
AvaII GGWCC 2 cut(s) 464, 902
BaeGI GKGCMC 2 cut(s) 1122, 1420
BaeI ACNNNNGTAYC 2 cut(s) 55, 88
BalI TGGCCA 1 cut(s) 775
BanI GGYRCC 5 cut(s) 71, 579, 613, 1117, 1750
BarI GAAGNNNNNNTAC 4 cut(s) 1572, 1604, 1628, 1660
BauI CACGAG 1 cut(s) 381
BbrPI CACGTG 1 cut(s) 860
BbsI GAAGAC 1 cut(s) 205
Bbv12I GWGCWC 2 cut(s) 81, 1420
BbvCI CCTCAGC 1 cut(s) 1893
BbvI GCAGC 7 cut(s) 277, 475, 716, 1192, 1639, 1819, 1846
BccI CCATC 8 cut(s) 674, 784, 874, 1082, 1425, 1634, 1781, 1844
BceAI ACGGC 2 cut(s) 702, 1193
BciT130I CCWGG 6 cut(s) 108, 651, 772, 900, 963, 1691
BcoDI GTCTC 4 cut(s) 276, 935, 1440, 1963
BcuI ACTAGT 2 cut(s) 809, 1139
BfaI CTAG 7 cut(s) 309, 810, 1014, 1140, 1344, 1556, 1781
BfmI CTRYAG 5 cut(s) 25, 441, 795, 831, 1098
BfoI RGCGCY 1 cut(s) 617
BfrI CTTAAG 1 cut(s) 547
BglII AGATCT 1 cut(s) 496
BisI GCNGC 8 cut(s) 291, 489, 705, 1206, 1653, 1808, 1860, 1980
BlsI GCNGC 8 cut(s) 292, 490, 706, 1207, 1654, 1809, 1861, 1981
Bme1390I CCNGG 6 cut(s) 108, 651, 772, 900, 963, 1691
Bme18I GGWCC 2 cut(s) 464, 902
BmeT110I CYCGRG 1 cut(s) 143
BmgT120I GGNCC 3 cut(s) 464, 902, 931
BmiI GGNNCC 7 cut(s) 73, 581, 615, 1119, 1728, 1736, 1752
BmrFI CCNGG 6 cut(s) 108, 651, 772, 900, 963, 1691
BmrI ACTGGG 1 cut(s) 489
BmuI ACTGGG 1 cut(s) 489
BpiI GAAGAC 1 cut(s) 205
BpmI CTGGAG 2 cut(s) 281, 1074
Bpu10I CCTNAGC 3 cut(s) 819, 927, 1893
BpuEI CTTGAG 1 cut(s) 559
BsaAI YACGTR 2 cut(s) 860, 1112
BsaBI GATNNNNATC 2 cut(s) 519, 970
BsaHI GRCGYC 1 cut(s) 614
BsaI GGTCTC 1 cut(s) 1440
BsaJI CCNNGG 7 cut(s) 160, 460, 591, 699, 1185, 1730, 1957
Bsc4I CCNNNNNNNGG 8 cut(s) 41, 223, 782, 1045, 1339, 1781, 1904, 1958
Bse1I ACTGG 3 cut(s) 484, 909, 1091
Bse8I GATNNNNATC 2 cut(s) 519, 970
BseBI CCWGG 6 cut(s) 108, 651, 772, 900, 963, 1691
BseDI CCNNGG 7 cut(s) 160, 460, 591, 699, 1185, 1730, 1957
BseGI GGATG 6 cut(s) 7, 569, 685, 1168, 1436, 1645
BseJI GATNNNNATC 2 cut(s) 519, 970
BseLI CCNNNNNNNGG 8 cut(s) 41, 223, 782, 1045, 1339, 1781, 1904, 1958
BseMII CTCAG 7 cut(s) 213, 833, 941, 1376, 1451, 1907, 1950
BseNI ACTGG 3 cut(s) 484, 909, 1091
BseRI GAGGAG 1 cut(s) 1747
BseSI GKGCMC 2 cut(s) 1122, 1420
BseXI GCAGC 7 cut(s) 277, 475, 716, 1192, 1639, 1819, 1846
Bsh1236I CGCG 1 cut(s) 988
BshFI GGCC 8 cut(s) 165, 748, 770, 775, 829, 884, 932, 1606
BshNI GGYRCC 5 cut(s) 71, 579, 613, 1117, 1750
BsiHKAI GWGCWC 2 cut(s) 81, 1420
BsiHKCI CYCGRG 1 cut(s) 143
BsiSI CCGG 1 cut(s) 1941
BslI CCNNNNNNNGG 8 cut(s) 41, 223, 782, 1045, 1339, 1781, 1904, 1958
BsmAI GTCTC 4 cut(s) 276, 935, 1440, 1963
BsnI GGCC 8 cut(s) 165, 748, 770, 775, 829, 884, 932, 1606
Bso31I GGTCTC 1 cut(s) 1440
BsoBI CYCGRG 1 cut(s) 143
Bsp1286I GDGCHC 3 cut(s) 81, 1122, 1420
Bsp143I GATC 7 cut(s) 139, 496, 520, 1058, 1766, 1873, 1888
Bsp19I CCATGG 3 cut(s) 460, 699, 1957
BspACI CCGC 7 cut(s) 157, 715, 803, 988, 1619, 1810, 1980
BspANI GGCC 8 cut(s) 165, 748, 770, 775, 829, 884, 932, 1606
BspCNI CTCAG 7 cut(s) 214, 832, 940, 1375, 1450, 1906, 1949
BspFNI CGCG 1 cut(s) 988
BspHI TCATGA 1 cut(s) 1522
BspLI GGNNCC 7 cut(s) 73, 581, 615, 1119, 1728, 1736, 1752
BspMAI CTGCAG 2 cut(s) 29, 445
BspPI GGATC 5 cut(s) 515, 1066, 1774, 1881, 1883
BspT107I GGYRCC 5 cut(s) 71, 579, 613, 1117, 1750
BspTI CTTAAG 1 cut(s) 547
BspTNI GGTCTC 1 cut(s) 1440
BsrI ACTGG 3 cut(s) 484, 909, 1091
BssECI CCNNGG 7 cut(s) 160, 460, 591, 699, 1185, 1730, 1957
BssMI GATC 7 cut(s) 139, 496, 520, 1058, 1766, 1873, 1888
BssNI GRCGYC 1 cut(s) 614
BssSI CACGAG 1 cut(s) 381
BssT1I CCWWGG 6 cut(s) 160, 460, 591, 699, 1185, 1957
Bst2BI CACGAG 1 cut(s) 381
Bst2UI CCWGG 6 cut(s) 108, 651, 772, 900, 963, 1691
Bst4CI ACNGT 5 cut(s) 958, 1235, 1502, 1538, 1649
Bst6I CTCTTC 5 cut(s) 230, 349, 634, 1475, 1511
BstACI GRCGYC 1 cut(s) 614
BstAFI CTTAAG 1 cut(s) 547
BstAPI GCANNNNNTGC 2 cut(s) 440, 923
BstBAI YACGTR 2 cut(s) 860, 1112
BstC8I GCNNGC 4 cut(s) 486, 1133, 1755, 1805
BstDEI CTNAG 9 cut(s) 222, 819, 927, 1362, 1437, 1464, 1877, 1893, 1936
BstDSI CCRYGG 3 cut(s) 460, 699, 1957
BstF5I GGATG 6 cut(s) 7, 569, 685, 1168, 1436, 1645
BstFNI CGCG 1 cut(s) 988
BstH2I RGCGCY 1 cut(s) 617
BstHHI GCGC 1 cut(s) 616
BstKTI GATC 7 cut(s) 142, 499, 523, 1061, 1769, 1876, 1891
BstMAI GTCTC 4 cut(s) 276, 935, 1440, 1963
BstMBI GATC 7 cut(s) 139, 496, 520, 1058, 1766, 1873, 1888
BstMWI GCNNNNNNNGC 4 cut(s) 419, 440, 923, 1375
BstNI CCWGG 6 cut(s) 108, 651, 772, 900, 963, 1691
BstNSI RCATGY 1 cut(s) 488
BstSCI CCNGG 6 cut(s) 106, 649, 770, 898, 961, 1689
BstSFI CTRYAG 5 cut(s) 25, 441, 795, 831, 1098
BstSLI GKGCMC 2 cut(s) 1122, 1420
BstSNI TACGTA 1 cut(s) 1112
BstUI CGCG 1 cut(s) 988
BstV1I GCAGC 7 cut(s) 277, 475, 716, 1192, 1639, 1819, 1846
BstV2I GAAGAC 1 cut(s) 205
BstX2I RGATCY 4 cut(s) 496, 1058, 1766, 1873
BstXI CCANNNNNNTGG 1 cut(s) 107
BstYI RGATCY 4 cut(s) 496, 1058, 1766, 1873
BsuRI GGCC 8 cut(s) 165, 748, 770, 775, 829, 884, 932, 1606
BtgI CCRYGG 3 cut(s) 460, 699, 1957
BtsCI GGATG 6 cut(s) 7, 569, 685, 1168, 1436, 1645
BtsIMutI CAGTG 1 cut(s) 477
Cac8I GCNNGC 4 cut(s) 486, 1133, 1755, 1805
CaiI CAGNNNCTG 3 cut(s) 563, 962, 1097
CciI TCATGA 1 cut(s) 1522
CfoI GCGC 1 cut(s) 616
Cfr13I GGNCC 3 cut(s) 464, 902, 931
Csp6I GTAC 7 cut(s) 72, 552, 580, 791, 800, 1109, 1403
CviAII CATG 8 cut(s) 67, 189, 257, 461, 485, 700, 1523, 1958
CviQI GTAC 7 cut(s) 72, 552, 580, 791, 800, 1109, 1403
DdeI CTNAG 9 cut(s) 222, 819, 927, 1362, 1437, 1464, 1877, 1893, 1936
DinI GGCGCC 1 cut(s) 615
DpnI GATC 7 cut(s) 141, 498, 522, 1060, 1768, 1875, 1890
DpnII GATC 7 cut(s) 139, 496, 520, 1058, 1766, 1873, 1888
EaeI YGGCCR 1 cut(s) 773
Eam1104I CTCTTC 5 cut(s) 230, 349, 634, 1475, 1511
EarI CTCTTC 5 cut(s) 230, 349, 634, 1475, 1511
EciI GGCGGA 2 cut(s) 146, 704
Eco105I TACGTA 1 cut(s) 1112
Eco130I CCWWGG 6 cut(s) 160, 460, 591, 699, 1185, 1957
Eco147I AGGCCT 3 cut(s) 748, 770, 1606
Eco31I GGTCTC 1 cut(s) 1440
Eco32I GATATC 2 cut(s) 320, 1251
Eco47I GGWCC 2 cut(s) 464, 902
Eco57I CTGAAG 3 cut(s) 477, 585, 1593
Eco72I CACGTG 1 cut(s) 860
Eco88I CYCGRG 1 cut(s) 143
EcoO109I RGGNCCY 1 cut(s) 902
EcoRI GAATTC 2 cut(s) 20, 1702
EcoRII CCWGG 6 cut(s) 106, 649, 770, 898, 961, 1689
EcoRV GATATC 2 cut(s) 320, 1251
EcoT14I CCWWGG 6 cut(s) 160, 460, 591, 699, 1185, 1957
EgeI GGCGCC 1 cut(s) 615
EheI GGCGCC 1 cut(s) 615
ErhI CCWWGG 6 cut(s) 160, 460, 591, 699, 1185, 1957
FaeI CATG 8 cut(s) 70, 192, 260, 464, 488, 703, 1526, 1961
FalI AAGNNNNNCTT 2 cut(s) 869, 901
FatI CATG 8 cut(s) 66, 188, 256, 460, 484, 699, 1522, 1957
FauI CCCGC 1 cut(s) 981
Fnu4HI GCNGC 8 cut(s) 291, 489, 705, 1206, 1653, 1808, 1860, 1980
FokI GGATG 5 cut(s) 556, 692, 1175, 1443, 1652
Fsp4HI GCNGC 8 cut(s) 291, 489, 705, 1206, 1653, 1808, 1860, 1980
FspBI CTAG 7 cut(s) 309, 810, 1014, 1140, 1344, 1556, 1781
GlaI GCGC 1 cut(s) 615
GluI GCNGC 8 cut(s) 291, 489, 705, 1206, 1653, 1808, 1860, 1980
GsuI CTGGAG 2 cut(s) 281, 1074
HaeII RGCGCY 1 cut(s) 617
HaeIII GGCC 8 cut(s) 165, 748, 770, 775, 829, 884, 932, 1606
HapII CCGG 1 cut(s) 1941
HhaI GCGC 1 cut(s) 616
Hin1I GRCGYC 1 cut(s) 614
Hin1II CATG 8 cut(s) 70, 192, 260, 464, 488, 703, 1526, 1961
Hin6I GCGC 1 cut(s) 614
HinP1I GCGC 1 cut(s) 614
HincII GTYRAC 1 cut(s) 1279
HindII GTYRAC 1 cut(s) 1279
HpaII CCGG 1 cut(s) 1941
HphI GGTGA 3 cut(s) 837, 1859, 1922
Hpy166II GTNNAC 7 cut(s) 335, 477, 791, 1279, 1403, 1418, 1913
Hpy188III TCNNGA 7 cut(s) 143, 145, 298, 374, 383, 1051, 1523
Hpy8I GTNNAC 7 cut(s) 335, 477, 791, 1279, 1403, 1418, 1913
Hpy99I CGWCG 2 cut(s) 327, 375
HpyAV CCTTC 6 cut(s) 477, 593, 604, 915, 1617, 1630
HpyCH4III ACNGT 5 cut(s) 958, 1235, 1502, 1538, 1649
HpyCH4IV ACGT 2 cut(s) 859, 1111
HpyCH4V TGCA 9 cut(s) 27, 151, 443, 622, 917, 1031, 1324, 1418, 1862
HpyF10VI GCNNNNNNNGC 4 cut(s) 419, 440, 923, 1375
HpyF3I CTNAG 9 cut(s) 222, 819, 927, 1362, 1437, 1464, 1877, 1893, 1936
HpySE526I ACGT 2 cut(s) 859, 1111
Hsp92I GRCGYC 1 cut(s) 614
Hsp92II CATG 8 cut(s) 70, 192, 260, 464, 488, 703, 1526, 1961
HspAI GCGC 1 cut(s) 614
KasI GGCGCC 1 cut(s) 613
KpnI GGTACC 2 cut(s) 75, 583
Kzo9I GATC 7 cut(s) 139, 496, 520, 1058, 1766, 1873, 1888
LmnI GCTCC 2 cut(s) 1726, 1734
Lsp1109I GCAGC 7 cut(s) 277, 475, 716, 1192, 1639, 1819, 1846
MaeI CTAG 7 cut(s) 309, 810, 1014, 1140, 1344, 1556, 1781
MaeII ACGT 2 cut(s) 859, 1111
MaeIII GTNAC 1 cut(s) 1931
MalI GATC 7 cut(s) 141, 498, 522, 1060, 1768, 1875, 1890
MboI GATC 7 cut(s) 139, 496, 520, 1058, 1766, 1873, 1888
MflI RGATCY 4 cut(s) 496, 1058, 1766, 1873
MhlI GDGCHC 3 cut(s) 81, 1122, 1420
MlsI TGGCCA 1 cut(s) 775
MluNI TGGCCA 1 cut(s) 775
Mly113I GGCGCC 1 cut(s) 614
MlyI GAGTC 5 cut(s) 194, 620, 937, 1341, 1528
Mox20I TGGCCA 1 cut(s) 775
MroXI GAANNNNTTC 1 cut(s) 1197
MscI TGGCCA 1 cut(s) 775
MseI TTAA 8 cut(s) 531, 548, 851, 1065, 1242, 1572, 1680, 1721
Msp20I TGGCCA 1 cut(s) 775
MspA1I CMGCKG 2 cut(s) 1757, 1810
MspCI CTTAAG 1 cut(s) 547
MspI CCGG 1 cut(s) 1941
MspR9I CCNGG 6 cut(s) 108, 651, 772, 900, 963, 1691
MvaI CCWGG 6 cut(s) 108, 651, 772, 900, 963, 1691
MvnI CGCG 1 cut(s) 988
MwoI GCNNNNNNNGC 4 cut(s) 419, 440, 923, 1375
NarI GGCGCC 1 cut(s) 614
NcoI CCATGG 3 cut(s) 460, 699, 1957
NdeII GATC 7 cut(s) 139, 496, 520, 1058, 1766, 1873, 1888
NlaIII CATG 8 cut(s) 70, 192, 260, 464, 488, 703, 1526, 1961
NlaIV GGNNCC 7 cut(s) 73, 581, 615, 1119, 1728, 1736, 1752
NmeAIII GCCGAG 1 cut(s) 1755
NspI RCATGY 1 cut(s) 488
PaeI GCATGC 1 cut(s) 488
PaeR7I CTCGAG 1 cut(s) 143
PagI TCATGA 1 cut(s) 1522
PceI AGGCCT 3 cut(s) 748, 770, 1606
PcsI WCGNNNNNNNCGW 4 cut(s) 280, 322, 367, 379
PdmI GAANNNNTTC 1 cut(s) 1197
PfeI GAWTC 9 cut(s) 377, 386, 415, 542, 966, 992, 1198, 1460, 1745
PflMI CCANNNNNTGG 1 cut(s) 41
PfoI TCCNGGA 2 cut(s) 106, 961
PkrI GCNGC 8 cut(s) 292, 490, 706, 1207, 1654, 1809, 1861, 1981
PleI GAGTC 5 cut(s) 193, 620, 937, 1341, 1527
PluTI GGCGCC 1 cut(s) 617
PmaCI CACGTG 1 cut(s) 860
PmlI CACGTG 1 cut(s) 860
PpsI GAGTC 5 cut(s) 193, 620, 937, 1341, 1527
Ppu21I YACGTR 2 cut(s) 860, 1112
PpuMI RGGWCCY 1 cut(s) 902
PshBI ATTAAT 2 cut(s) 531, 1572
Psp5II RGGWCCY 1 cut(s) 902
Psp6I CCWGG 6 cut(s) 106, 649, 770, 898, 961, 1689
PspCI CACGTG 1 cut(s) 860
PspGI CCWGG 6 cut(s) 106, 649, 770, 898, 961, 1689
PspN4I GGNNCC 7 cut(s) 73, 581, 615, 1119, 1728, 1736, 1752
PspPI GGNCC 3 cut(s) 464, 902, 931
PspPPI RGGWCCY 1 cut(s) 902
PsrI GAACNNNNNNTAC 2 cut(s) 259, 291
PstI CTGCAG 2 cut(s) 29, 445
PstNI CAGNNNCTG 3 cut(s) 563, 962, 1097
PsuI RGATCY 4 cut(s) 496, 1058, 1766, 1873
PvuII CAGCTG 1 cut(s) 1757
RsaI GTAC 7 cut(s) 73, 553, 581, 792, 801, 1110, 1404
RsaNI GTAC 7 cut(s) 72, 552, 580, 791, 800, 1109, 1403
SaqAI TTAA 8 cut(s) 531, 548, 851, 1065, 1242, 1572, 1680, 1721
SatI GCNGC 8 cut(s) 291, 489, 705, 1206, 1653, 1808, 1860, 1980
Sau3AI GATC 7 cut(s) 139, 496, 520, 1058, 1766, 1873, 1888
Sau96I GGNCC 3 cut(s) 464, 902, 931
SchI GAGTC 5 cut(s) 194, 620, 937, 1341, 1528
ScrFI CCNGG 6 cut(s) 108, 651, 772, 900, 963, 1691
SduI GDGCHC 3 cut(s) 81, 1122, 1420
SfcI CTRYAG 5 cut(s) 25, 441, 795, 831, 1098
SfoI GGCGCC 1 cut(s) 615
Sfr274I CTCGAG 1 cut(s) 143
SinI GGWCC 2 cut(s) 464, 902
SlaI CTCGAG 1 cut(s) 143
SmlI CTYRAG 3 cut(s) 143, 547, 574
SmoI CTYRAG 3 cut(s) 143, 547, 574
SnaBI TACGTA 1 cut(s) 1112
SpeI ACTAGT 2 cut(s) 809, 1139
SphI GCATGC 1 cut(s) 488
SseBI AGGCCT 3 cut(s) 748, 770, 1606
SsiI CCGC 7 cut(s) 157, 715, 803, 988, 1619, 1810, 1980
SspDI GGCGCC 1 cut(s) 613
SspI AATATT 1 cut(s) 122
SspMI CTAG 7 cut(s) 309, 810, 1014, 1140, 1344, 1556, 1781
StuI AGGCCT 3 cut(s) 748, 770, 1606
StyD4I CCNGG 6 cut(s) 106, 649, 770, 898, 961, 1689
StyI CCWWGG 6 cut(s) 160, 460, 591, 699, 1185, 1957
TaaI ACNGT 5 cut(s) 958, 1235, 1502, 1538, 1649
TaiI ACGT 2 cut(s) 862, 1114
TaqI TCGA 6 cut(s) 144, 316, 322, 946, 1050, 1634
TaqII GACCGA 1 cut(s) 351
TatI WGTACW 1 cut(s) 551
TauI GCSGC 1 cut(s) 1982
TfiI GAWTC 9 cut(s) 377, 386, 415, 542, 966, 992, 1198, 1460, 1745
Tru1I TTAA 8 cut(s) 531, 548, 851, 1065, 1242, 1572, 1680, 1721
Tru9I TTAA 8 cut(s) 531, 548, 851, 1065, 1242, 1572, 1680, 1721
TscAI CASTG 1 cut(s) 484
TseI GCWGC 7 cut(s) 290, 488, 704, 1205, 1652, 1807, 1859
TspDTI ATGAA 7 cut(s) 66, 132, 248, 525, 984, 1539, 1698
TspGWI ACGGA 2 cut(s) 1508, 1739
TspRI CASTG 1 cut(s) 484
Van91I CCANNNNNTGG 1 cut(s) 41
Vha464I CTTAAG 1 cut(s) 547
VneI GTGCAC 1 cut(s) 1416
VpaK11BI GGWCC 2 cut(s) 464, 902
VspI ATTAAT 2 cut(s) 531, 1572
XapI RAATTY 5 cut(s) 20, 919, 1702, 1826, 1882
XceI RCATGY 1 cut(s) 488
XhoI CTCGAG 1 cut(s) 143
XmnI GAANNNNTTC 1 cut(s) 1197
XspI CTAG 7 cut(s) 309, 810, 1014, 1140, 1344, 1556, 1781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.