Rh5DG081800

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000854
Physical Location & Seq
Forward (+)
7160024 .. 7162710
2687 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG081800.1

Sequence Viewer

Length: 2232 bp
ATGGACGATTGCTGTGCGGTGTGTGCCGACACCCTGGAATGGGTTGCCTATGGGGCTTGTGGCCATAAGGAGGTCTGCTCCACCTGCGTGGCTCGCCTCCGTTTCATCTGCGAGGACCGCCGTTGCTGCATCTGCAAGACCGAGTCCAACGTCGTTTTTGTCACCAAGGCTCTAGGAGACTATACCAAGATGGTTAGAGACTTGCCATCTAAAGCAAGGGAGGGTCGCTGTGGATCATATTGGTACCATGAGGACACACAAGCATTTTTCGACGATGCGGATCACTACAAGATGATCAAGTCAGTGTGCAATCTTTCATGCAGTGAATGTGACAAGATGGAGGAGAAATCAACGATTAGGTTTCGGAACATTGAACAGCTCAAGTTACACTTGTTCCACCAGCATAGGTTGTTTATGTGTCCTCTATGTTTGGAAGGGAGGAAGGTGTTTGTATGTGAACAAAAGCTTTATACTAAAGCCCAGTTGAAACGGCATACAAGTACAGGGGACTCTGTAGTTGATGGAAGTGAAAGCGAAAGAGGTGGCTTCAAGGGACATCCTATGTGTAAGTTTTGCAAAATTGGATTCTACGGCGAGAATGAACTGTATGCTCACATGACTACTGGCCACTATAAGTGTCATTTATGTTGCAATTCTGGAGAACAGTATGAATATTATAAGAACTATCATGACCTCGAGTTGCACTTCAGCCGAGGCCATTTTCTATGTGAAGATGAGTCCTGCCTTGAGAAAAAGTTTGTGGTGTTCCGATCCGAGGCAGAATTGAAGAAGCACAGTACTATGGAACATGGGGGGCGTATGTCTCGCTCCAAGCGTAATGCTGCTCTCCAATTACCAACTAGCTTCCGATATGGACCAAGTAATGACCAAGATAGTAGACGTGGAAGAAGAGGTCTGCCATTTCGTGGCGATTCTTCTAATGATCAAGCAAGCAGTTTAGAGACACCTAATGCTGATGATAGAACATTGCATGACCCTTCATCATCCATTAGGCACGCTGGTAGTTCGGAATTACTTGAAGATACAAGTGACATTGATCCAATCATTAAGCCATTTGAGTCCTTAAGTAGACCTTCAAGTGATACAGAAGCATCTTCAAGGTACCTGCGAGTAGCCTTGGGGAAAAACAGTGGGAAAGCGAAAGCGCAATTGGAGGACTCTTCCTTATTTCCTCCCCTTGCACCTGGCAGCAGCAGCAGTCAACCGACTCCCAAACCTGAATCTGATCGTGGTTTGCCTAACAACAATACCATGGCAGCACATCTCCGCAGGCAAAACAACCGGAAGATGGCTGTTGAGTGTCCTGATATTAGGCCTGCTGTTATTAGTTCTAGTGAGGCTTGGCCAGCAGCGGGGCGTGTAGCACCACCTACTAGTTCATCTCAGACGCCGTGGCCTAAAACTAATGTTCCAGGGATTGTCTCAGCAGTTACTAAGCCTGCTGTTAGTTCTAGTCAGGCTTGGCCAGCAGCTGGGCGTGTAGCTCCACCTACTAATTCATCTCAGATGGCATGGCCTAAAGCAAATGTGAGTGCAGCACCACCTACTAGTTCATCTCAGAAGCTGTTTTCTAAAACTAATAGTCAGAACAAGGCGTGGCCGAAGGTTTCAGGTTGTGGTCAGAACAAGACGGCCTTTGGTAAGGGAGCAGGACATTCCAGCTATGCAAGCTCCACTCTGCAGGCTCAAGTTGAGAACCGAGAGACATCAACAGAAGTGCACAAGTGCGTGAGTTTGGATTCCAGCTTGGATTTCCCTCCAGTTTCTGCAGCACAAGTAGTGCAAAAGTTGCCCCAACAAACTAGTGAGCCTTTATTGAAAGTGGGGGATTTTCAAGCTGCTAATAAGGCCTTGGTGGAAAATATTCGCGCTGCTGTTGACTTCAATGAAGACAAATACACTGCGTTTAAGGACATATCTGTACAGTATAGTCAGGGATTAGTGGACATAAACGTGTATTTTAATTTTGTGAGGCAGTTTGGGTTGTTACATCTTGTCCTTGACTTGGCTAGACTGTGCCCCAATGCTGAGAAGCAGCAAGAGCTAATTGATGCCTACGATAACAGTATGAGAAGCAATGGTGCAGAAGAGGATGATGGATGGTCTCAGGTCAAGGTCCGATTGAAAGATTTGAAGAAAGGTAAAGGGAAGAGTTCTAACAATGGCTCTACTGCAGCACCAGTTTTGAATCTCAGGTCAAGGTCCGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

743

Amino Acids

82.3

Weight (kDa)

8.45

Isoelectric Point (pI)

50.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RING_ZNF598 PF25447 2 - 61 2.8e-07 ZNF598 RING finger domain
zf-C2H2_13 PF23230 210 - 265 2.2e-14 C2H2-type zinc finger
PAH_ZNF598 PF23202 619 - 694 4.4e-18 ZNF598 PAH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 678
AarI CACCTGC 1 cut(s) 92
Acc36I ACCTGC 2 cut(s) 92, 1134
Acc65I GGTACC 2 cut(s) 243, 1122
AccB1I GGYRCC 2 cut(s) 243, 1122
AccB7I CCANNNNNTGG 2 cut(s) 926, 1493
AccI GTMKAC 2 cut(s) 898, 1090
AccII CGCG 1 cut(s) 1890
AciI CCGC 5 cut(s) 17, 118, 278, 1288, 1373
AclWI GGATC 4 cut(s) 241, 288, 765, 1052
AcoI YGGCCR 5 cut(s) 61, 625, 1364, 1484, 1619
AcuI CTGAAG 1 cut(s) 691
AcyI GRCGYC 1 cut(s) 1409
AfaI GTAC 5 cut(s) 245, 502, 799, 1124, 1944
AfiI CCNNNNNNNGG 9 cut(s) 39, 40, 70, 775, 926, 1309, 1373, 1493, 2026
AflII CTTAAG 1 cut(s) 1084
AflIII ACRYGT 1 cut(s) 1974
AhlI ACTAGT 3 cut(s) 1394, 1568, 1823
AjiI CACGTC 1 cut(s) 902
AjnI CCWGG 3 cut(s) 33, 1204, 1432
AjuI GAANNNNNNNTTGG 2 cut(s) 1154, 1186
AleI CACNNNNGTG 1 cut(s) 86
Alw21I GWGCWC 1 cut(s) 1743
Alw26I GTCTC 7 cut(s) 171, 192, 828, 956, 1447, 1718, 2130
Alw44I GTGCAC 1 cut(s) 1739
AlwI GGATC 4 cut(s) 241, 288, 765, 1052
AlwNI CAGNNNCTG 3 cut(s) 1493, 1585, 1787
Ama87I CYCGRG 1 cut(s) 695
ApaLI GTGCAC 1 cut(s) 1739
Asp700I GAANNNNTTC 1 cut(s) 1884
Asp718I GGTACC 2 cut(s) 243, 1122
AspLEI GCGC 2 cut(s) 1168, 1892
AspS9I GGNCC 4 cut(s) 115, 875, 2137, 2223
AsuHPI GGTGA 1 cut(s) 154
AvaI CYCGRG 1 cut(s) 695
AvaII GGWCC 4 cut(s) 115, 875, 2137, 2223
BaeGI GKGCMC 2 cut(s) 1743, 2042
BalI TGGCCA 4 cut(s) 63, 627, 1366, 1486
BanI GGYRCC 2 cut(s) 243, 1122
BbsI GAAGAC 1 cut(s) 1917
Bbv12I GWGCWC 1 cut(s) 1743
BccI CCATC 8 cut(s) 184, 214, 331, 515, 1303, 1522, 2111, 2115
BceAI ACGGC 5 cut(s) 105, 506, 607, 1396, 1668
BcgI CGANNNNNNTGC 1 cut(s) 30
BciT130I CCWGG 3 cut(s) 35, 1206, 1434
BclI TGATCA 2 cut(s) 294, 943
BcoDI GTCTC 7 cut(s) 171, 192, 828, 956, 1447, 1718, 2130
BcuI ACTAGT 3 cut(s) 1394, 1568, 1823
BfaI CTAG 8 cut(s) 173, 861, 1353, 1395, 1473, 1569, 1824, 2031
BfmI CTRYAG 4 cut(s) 513, 1700, 1788, 2193
BfrI CTTAAG 1 cut(s) 1084
BfuAI ACCTGC 2 cut(s) 92, 1134
BglI GCCNNNNNGGC 1 cut(s) 53
BmcAI AGTACT 1 cut(s) 799
Bme1390I CCNGG 3 cut(s) 35, 1206, 1434
Bme18I GGWCC 4 cut(s) 115, 875, 2137, 2223
BmeT110I CYCGRG 1 cut(s) 695
BmgBI CACGTC 1 cut(s) 902
BmgT120I GGNCC 4 cut(s) 115, 875, 2137, 2223
BmiI GGNNCC 2 cut(s) 245, 1124
BmrFI CCNGG 3 cut(s) 35, 1206, 1434
BmrI ACTGGG 1 cut(s) 475
BmsI GCATC 4 cut(s) 138, 265, 1121, 2062
BmuI ACTGGG 1 cut(s) 475
BpiI GAAGAC 1 cut(s) 1917
BplI GAGNNNNNCTC 2 cut(s) 62, 94
BpmI CTGGAG 2 cut(s) 678, 1764
BpuEI CTTGAG 3 cut(s) 365, 767, 1692
BsaBI GATNNNNATC 1 cut(s) 279
BsaHI GRCGYC 1 cut(s) 1409
BsaI GGTCTC 1 cut(s) 2130
BsaJI CCNNGG 9 cut(s) 33, 165, 712, 774, 1137, 1272, 1412, 1433, 1872
BsaWI WCCGGW 1 cut(s) 1302
Bsc4I CCNNNNNNNGG 9 cut(s) 39, 40, 70, 775, 926, 1309, 1373, 1493, 2026
Bse1I ACTGG 4 cut(s) 481, 628, 1781, 2201
Bse3DI GCAATG 2 cut(s) 986, 2104
Bse8I GATNNNNATC 1 cut(s) 279
BseBI CCWGG 3 cut(s) 35, 1206, 1434
BseDI CCNNGG 9 cut(s) 33, 165, 712, 774, 1137, 1272, 1412, 1433, 1872
BseGI GGATG 4 cut(s) 556, 1004, 2119, 2126
BseJI GATNNNNATC 1 cut(s) 279
BseLI CCNNNNNNNGG 9 cut(s) 39, 40, 70, 775, 926, 1309, 1373, 1493, 2026
BseMI GCAATG 2 cut(s) 986, 2104
BseMII CTCAG 7 cut(s) 1418, 1458, 1538, 1592, 2040, 2141, 2227
BseNI ACTGG 4 cut(s) 481, 628, 1781, 2201
BseRI GAGGAG 1 cut(s) 356
BseSI GKGCMC 2 cut(s) 1743, 2042
BseYI CCCAGC 1 cut(s) 1493
BsgI GTGCAG 2 cut(s) 1575, 2124
Bsh1236I CGCG 1 cut(s) 1890
BshNI GGYRCC 2 cut(s) 243, 1122
BsiHKAI GWGCWC 1 cut(s) 1743
BsiHKCI CYCGRG 1 cut(s) 695
BsiSI CCGG 1 cut(s) 1303
BslFI GGGAC 2 cut(s) 521, 567
BslI CCNNNNNNNGG 9 cut(s) 39, 40, 70, 775, 926, 1309, 1373, 1493, 2026
BsmAI GTCTC 7 cut(s) 171, 192, 828, 956, 1447, 1718, 2130
BsmFI GGGAC 2 cut(s) 521, 567
Bso31I GGTCTC 1 cut(s) 2130
BsoBI CYCGRG 1 cut(s) 695
Bsp1286I GDGCHC 2 cut(s) 1743, 2042
Bsp1407I TGTACA 1 cut(s) 1942
Bsp143I GATC 7 cut(s) 233, 280, 294, 770, 943, 1057, 1246
Bsp19I CCATGG 1 cut(s) 1272
BspACI CCGC 5 cut(s) 17, 118, 278, 1288, 1373
BspCNI CTCAG 7 cut(s) 1417, 1457, 1537, 1591, 2041, 2140, 2226
BspFNI CGCG 1 cut(s) 1890
BspHI TCATGA 1 cut(s) 688
BspLI GGNNCC 2 cut(s) 245, 1124
BspMAI CTGCAG 3 cut(s) 1704, 1792, 2197
BspMI ACCTGC 2 cut(s) 92, 1134
BspPI GGATC 4 cut(s) 241, 288, 765, 1052
BspT107I GGYRCC 2 cut(s) 243, 1122
BspTI CTTAAG 1 cut(s) 1084
BspTNI GGTCTC 1 cut(s) 2130
BsrDI GCAATG 2 cut(s) 986, 2104
BsrGI TGTACA 1 cut(s) 1942
BsrI ACTGG 4 cut(s) 481, 628, 1781, 2201
BssECI CCNNGG 9 cut(s) 33, 165, 712, 774, 1137, 1272, 1412, 1433, 1872
BssMI GATC 7 cut(s) 233, 280, 294, 770, 943, 1057, 1246
BssNI GRCGYC 1 cut(s) 1409
BssT1I CCWWGG 4 cut(s) 165, 1137, 1272, 1872
Bst2UI CCWGG 3 cut(s) 35, 1206, 1434
Bst4CI ACNGT 7 cut(s) 606, 666, 797, 1151, 1947, 2037, 2087
Bst6I CTCTTC 4 cut(s) 904, 1186, 2103, 2165
BstACI GRCGYC 1 cut(s) 1409
BstAFI CTTAAG 1 cut(s) 1084
BstAPI GCANNNNNTGC 1 cut(s) 1810
BstAUI TGTACA 1 cut(s) 1942
BstDEI CTNAG 8 cut(s) 1404, 1444, 1455, 1524, 1578, 2049, 2127, 2213
BstDSI CCRYGG 2 cut(s) 1272, 1412
BstF5I GGATG 4 cut(s) 556, 1004, 2119, 2126
BstFNI CGCG 1 cut(s) 1890
BstHHI GCGC 2 cut(s) 1168, 1892
BstKTI GATC 7 cut(s) 236, 283, 297, 773, 946, 1060, 1249
BstMAI GTCTC 7 cut(s) 171, 192, 828, 956, 1447, 1718, 2130
BstMBI GATC 7 cut(s) 233, 280, 294, 770, 943, 1057, 1246
BstNI CCWGG 3 cut(s) 35, 1206, 1434
BstSCI CCNGG 3 cut(s) 33, 1204, 1432
BstSFI CTRYAG 4 cut(s) 513, 1700, 1788, 2193
BstSLI GKGCMC 2 cut(s) 1743, 2042
BstUI CGCG 1 cut(s) 1890
BstV2I GAAGAC 1 cut(s) 1917
BstXI CCANNNNNNTGG 1 cut(s) 88
BtgI CCRYGG 2 cut(s) 1272, 1412
BtrI CACGTC 1 cut(s) 902
BtsCI GGATG 4 cut(s) 556, 1004, 2119, 2126
BtsI GCAGTG 2 cut(s) 328, 1920
BtsIMutI CAGTG 4 cut(s) 309, 328, 1156, 1920
BveI ACCTGC 2 cut(s) 92, 1134
CaiI CAGNNNCTG 3 cut(s) 1493, 1585, 1787
CciI TCATGA 1 cut(s) 688
CfoI GCGC 2 cut(s) 1168, 1892
Cfr13I GGNCC 4 cut(s) 115, 875, 2137, 2223
CseI GACGC 1 cut(s) 1417
Csp6I GTAC 5 cut(s) 244, 501, 798, 1123, 1943
CviAII CATG 8 cut(s) 248, 318, 616, 689, 809, 992, 1273, 1533
CviQI GTAC 5 cut(s) 244, 501, 798, 1123, 1943
DdeI CTNAG 8 cut(s) 1404, 1444, 1455, 1524, 1578, 2049, 2127, 2213
DpnI GATC 7 cut(s) 235, 282, 296, 772, 945, 1059, 1248
DpnII GATC 7 cut(s) 233, 280, 294, 770, 943, 1057, 1246
EaeI YGGCCR 5 cut(s) 61, 625, 1364, 1484, 1619
Eam1104I CTCTTC 4 cut(s) 904, 1186, 2103, 2165
EarI CTCTTC 4 cut(s) 904, 1186, 2103, 2165
Eco130I CCWWGG 4 cut(s) 165, 1137, 1272, 1872
Eco147I AGGCCT 2 cut(s) 1336, 1871
Eco31I GGTCTC 1 cut(s) 2130
Eco47I GGWCC 4 cut(s) 115, 875, 2137, 2223
Eco57I CTGAAG 1 cut(s) 691
Eco88I CYCGRG 1 cut(s) 695
EcoRII CCWGG 3 cut(s) 33, 1204, 1432
EcoT14I CCWWGG 4 cut(s) 165, 1137, 1272, 1872
ErhI CCWWGG 4 cut(s) 165, 1137, 1272, 1872
FaeI CATG 8 cut(s) 251, 321, 619, 692, 812, 995, 1276, 1536
FalI AAGNNNNNCTT 6 cut(s) 374, 406, 1078, 1110, 1640, 1672
FaqI GGGAC 2 cut(s) 521, 567
FatI CATG 8 cut(s) 247, 317, 615, 688, 808, 991, 1272, 1532
FauI CCCGC 1 cut(s) 1366
FbaI TGATCA 2 cut(s) 294, 943
FblI GTMKAC 2 cut(s) 898, 1090
FokI GGATG 4 cut(s) 543, 991, 2126, 2133
FspBI CTAG 8 cut(s) 173, 861, 1353, 1395, 1473, 1569, 1824, 2031
GlaI GCGC 2 cut(s) 1167, 1891
GsaI CCCAGC 1 cut(s) 1497
GsuI CTGGAG 2 cut(s) 678, 1764
HapII CCGG 1 cut(s) 1303
HgaI GACGC 1 cut(s) 1417
HhaI GCGC 2 cut(s) 1168, 1892
Hin1I GRCGYC 1 cut(s) 1409
Hin1II CATG 8 cut(s) 251, 321, 619, 692, 812, 995, 1276, 1536
Hin6I GCGC 2 cut(s) 1166, 1890
HinP1I GCGC 2 cut(s) 1166, 1890
HincII GTYRAC 2 cut(s) 1223, 1900
HindII GTYRAC 2 cut(s) 1223, 1900
HindIII AAGCTT 1 cut(s) 464
HpaII CCGG 1 cut(s) 1303
HphI GGTGA 1 cut(s) 154
Hpy166II GTNNAC 7 cut(s) 458, 899, 1091, 1223, 1741, 1900, 1966
Hpy188III TCNNGA 3 cut(s) 657, 689, 1325
Hpy8I GTNNAC 7 cut(s) 458, 899, 1091, 1223, 1741, 1900, 1966
Hpy99I CGWCG 2 cut(s) 155, 275
HpyAV CCTTC 5 cut(s) 428, 436, 1008, 1104, 1618
HpyCH4III ACNGT 7 cut(s) 606, 666, 797, 1151, 1947, 2037, 2087
HpyCH4IV ACGT 3 cut(s) 150, 901, 1974
HpyF3I CTNAG 8 cut(s) 1404, 1444, 1455, 1524, 1578, 2049, 2127, 2213
HpySE526I ACGT 3 cut(s) 150, 901, 1974
Hsp92I GRCGYC 1 cut(s) 1409
Hsp92II CATG 8 cut(s) 251, 321, 619, 692, 812, 995, 1276, 1536
HspAI GCGC 2 cut(s) 1166, 1890
KpnI GGTACC 2 cut(s) 247, 1126
Ksp22I TGATCA 2 cut(s) 294, 943
Kzo9I GATC 7 cut(s) 233, 280, 294, 770, 943, 1057, 1246
LmnI GCTCC 5 cut(s) 83, 833, 1510, 1667, 1697
LweI GCATC 4 cut(s) 138, 265, 1121, 2062
MaeI CTAG 8 cut(s) 173, 861, 1353, 1395, 1473, 1569, 1824, 2031
MaeII ACGT 3 cut(s) 150, 901, 1974
MaeIII GTNAC 6 cut(s) 160, 329, 384, 1049, 1450, 2007
MalI GATC 7 cut(s) 235, 282, 296, 772, 945, 1059, 1248
MboI GATC 7 cut(s) 233, 280, 294, 770, 943, 1057, 1246
MfeI CAATTG 1 cut(s) 1169
MhlI GDGCHC 2 cut(s) 1743, 2042
MlsI TGGCCA 4 cut(s) 63, 627, 1366, 1486
MluCI AATT 9 cut(s) 579, 652, 782, 851, 1031, 1169, 1516, 1984, 2067
MluNI TGGCCA 4 cut(s) 63, 627, 1366, 1486
MlyI GAGTC 6 cut(s) 152, 503, 746, 1088, 1172, 1222
MmeI TCCRAC 1 cut(s) 171
Mox20I TGGCCA 4 cut(s) 63, 627, 1366, 1486
MroXI GAANNNNTTC 1 cut(s) 1884
MscI TGGCCA 4 cut(s) 63, 627, 1366, 1486
MseI TTAA 4 cut(s) 1068, 1085, 1929, 1983
MslI CAYNNNNRTG 2 cut(s) 86, 1973
Msp20I TGGCCA 4 cut(s) 63, 627, 1366, 1486
MspA1I CMGCKG 2 cut(s) 1373, 1493
MspCI CTTAAG 1 cut(s) 1084
MspI CCGG 1 cut(s) 1303
MspR9I CCNGG 3 cut(s) 35, 1206, 1434
MunI CAATTG 1 cut(s) 1169
MvaI CCWGG 3 cut(s) 35, 1206, 1434
MvnI CGCG 1 cut(s) 1890
NcoI CCATGG 1 cut(s) 1272
NdeII GATC 7 cut(s) 233, 280, 294, 770, 943, 1057, 1246
NlaIII CATG 8 cut(s) 251, 321, 619, 692, 812, 995, 1276, 1536
NlaIV GGNNCC 2 cut(s) 245, 1124
NmeAIII GCCGAG 1 cut(s) 737
NmuCI GTSAC 3 cut(s) 160, 329, 1049
OliI CACNNNNGTG 1 cut(s) 86
PaeR7I CTCGAG 1 cut(s) 695
PagI TCATGA 1 cut(s) 688
PaqCI CACCTGC 1 cut(s) 92
PceI AGGCCT 2 cut(s) 1336, 1871
PcsI WCGNNNNNNNCGW 1 cut(s) 832
PdmI GAANNNNTTC 1 cut(s) 1884
PfeI GAWTC 5 cut(s) 585, 932, 1241, 1760, 2209
PflFI GACNNNGTC 1 cut(s) 142
PflMI CCANNNNNTGG 2 cut(s) 926, 1493
PleI GAGTC 6 cut(s) 151, 503, 745, 1087, 1172, 1222
PpsI GAGTC 6 cut(s) 151, 503, 745, 1087, 1172, 1222
PsiI TTATAA 1 cut(s) 678
Psp6I CCWGG 3 cut(s) 33, 1204, 1432
PspFI CCCAGC 1 cut(s) 1493
PspGI CCWGG 3 cut(s) 33, 1204, 1432
PspN4I GGNNCC 2 cut(s) 245, 1124
PspPI GGNCC 4 cut(s) 115, 875, 2137, 2223
PspXI VCTCGAGB 1 cut(s) 695
PstI CTGCAG 3 cut(s) 1704, 1792, 2197
PstNI CAGNNNCTG 3 cut(s) 1493, 1585, 1787
PsyI GACNNNGTC 1 cut(s) 142
PvuII CAGCTG 1 cut(s) 1493
RsaI GTAC 5 cut(s) 245, 502, 799, 1124, 1944
RsaNI GTAC 5 cut(s) 244, 501, 798, 1123, 1943
RseI CAYNNNNRTG 2 cut(s) 86, 1973
SaqAI TTAA 4 cut(s) 1068, 1085, 1929, 1983
Sau3AI GATC 7 cut(s) 233, 280, 294, 770, 943, 1057, 1246
Sau96I GGNCC 4 cut(s) 115, 875, 2137, 2223
ScaI AGTACT 1 cut(s) 799
SchI GAGTC 6 cut(s) 152, 503, 746, 1088, 1172, 1222
ScrFI CCNGG 3 cut(s) 35, 1206, 1434
SduI GDGCHC 2 cut(s) 1743, 2042
SfaNI GCATC 4 cut(s) 138, 265, 1121, 2062
SfcI CTRYAG 4 cut(s) 513, 1700, 1788, 2193
Sfr274I CTCGAG 1 cut(s) 695
SinI GGWCC 4 cut(s) 115, 875, 2137, 2223
SlaI CTCGAG 1 cut(s) 695
SmiMI CAYNNNNRTG 2 cut(s) 86, 1973
SmlI CTYRAG 5 cut(s) 380, 695, 746, 1084, 1707
SmoI CTYRAG 5 cut(s) 380, 695, 746, 1084, 1707
SpeI ACTAGT 3 cut(s) 1394, 1568, 1823
Sse9I AATT 9 cut(s) 579, 652, 782, 851, 1031, 1169, 1516, 1984, 2067
SseBI AGGCCT 2 cut(s) 1336, 1871
SsiI CCGC 5 cut(s) 17, 118, 278, 1288, 1373
SspI AATATT 2 cut(s) 674, 1885
SspMI CTAG 8 cut(s) 173, 861, 1353, 1395, 1473, 1569, 1824, 2031
StuI AGGCCT 2 cut(s) 1336, 1871
StyD4I CCNGG 3 cut(s) 33, 1204, 1432
StyI CCWWGG 4 cut(s) 165, 1137, 1272, 1872
TaaI ACNGT 7 cut(s) 606, 666, 797, 1151, 1947, 2037, 2087
TaiI ACGT 3 cut(s) 153, 904, 1977
TaqI TCGA 2 cut(s) 270, 696
TaqII GACCGA 1 cut(s) 155
TasI AATT 9 cut(s) 579, 652, 782, 851, 1031, 1169, 1516, 1984, 2067
TatI WGTACW 3 cut(s) 500, 797, 1942
TfiI GAWTC 5 cut(s) 585, 932, 1241, 1760, 2209
Tru1I TTAA 4 cut(s) 1068, 1085, 1929, 1983
Tru9I TTAA 4 cut(s) 1068, 1085, 1929, 1983
TscAI CASTG 4 cut(s) 309, 328, 1156, 1927
TseFI GTSAC 3 cut(s) 160, 329, 1049
Tsp45I GTSAC 3 cut(s) 160, 329, 1049
TspDTI ATGAA 9 cut(s) 94, 306, 615, 684, 990, 1389, 1509, 1563, 1923
TspGWI ACGGA 1 cut(s) 89
TspRI CASTG 4 cut(s) 309, 328, 1156, 1927
Tth111I GACNNNGTC 1 cut(s) 142
Van91I CCANNNNNTGG 2 cut(s) 926, 1493
Vha464I CTTAAG 1 cut(s) 1084
VneI GTGCAC 1 cut(s) 1739
VpaK11BI GGWCC 4 cut(s) 115, 875, 2137, 2223
XhoI CTCGAG 1 cut(s) 695
XmiI GTMKAC 2 cut(s) 898, 1090
XmnI GAANNNNTTC 1 cut(s) 1884
XspI CTAG 8 cut(s) 173, 861, 1353, 1395, 1473, 1569, 1824, 2031
ZrmI AGTACT 1 cut(s) 799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.