RLG00000025171

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000854
Physical Location & Seq
Reverse (-)
42703152 .. 42709747
6596 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025171

Sequence Viewer

Length: 2823 bp
ATGGAGAGAGTGAGTAAGGTCCTGCTGATGATCCTGACCGTTGTTGCAGTGGTTCTGGCTTTGGGTGTTGAAGCAAGAGTGATGAAGACTAAAGAGCAAGTTGAGCATCCCCAAAACTTCTATGGAGGAGCTGGAGGTGCTTTCTTCCCAGGCTCAGGCCCAGGCTTTGCTACTGGAATTGGGTTTAGCCCATCAGGCTTCTGCACACTCCCTGGTGGATGTGTCCCTACTGCCGGTGGTTTGCCCACTATTCCTGGTGGCTCTATTGTGAATAGTGATTCCAATTTACCTCTCACAAATCCTTTGGTCTGTTCACAAAGAGTCAACAGAGAAAAGAGAAGAAAAACAATGGACGATAGCTGTGCTGTCTGTGCAGAGACACTTCAATGGGTCGCATATGGTTCCTGTGGCCATCGAGAGGTCTGCTCCACCTGCACTATTCGCCTCCGTTTCATCTGTGGAGATTCCCATTGCTGCCTCTGCAAGAGTGAATCTAAGATCATCTTTGTCACCAAGGCGTTAGGTGACTATACAAGGATGATAAATGATTTTTCTGTTTTGCCAACTCCTCTAATGGAGGGTCAACTTGGACCATACTGGTACCATGAAGGAACACAAGCCTTTTTTGATGATGTTGATCACTACAAGATGATAAAGACCATGTGCAGGCTATCCTGTAGTCTTTGTAATAAGATTAATGAACAAAGGAGTGAGGGGTCGAAGAAAAAAGGGGAATTTAAAAATGTTGAGCAGCTGAAAAGTCATTTGTTTCATCGGCATAGGCTGTTTATGTGCAGTCTGTGCTTGGAGGGAAGGAAGATATTTATCTGTGAGCAAAAGTTATATACTAAAGCACAATTGGATCGGCATACAGAGACAGGTGATTCAGAGGTAGATGGCAGTGAGAGTGAAAGAGGTGGGTTTAATGGACACCCTATGTGTGAGTTTTGCAAGAATCCATTTTATGGAGATAATGAGCTGTACATGCATATGTCTACCGAGCATTTTACTTGTCATATATGCCAAAGGCAGCGTCCAGGACAGTATGAATACTACAGTAACTATGACAACTTGGAGATTCATTTTCAACAAGCGCACTTCTTATGCAAGGATGATGCCTGCCTAACAAAAAAATTTGTTGTTTTTGCAACTGAATCTGAAATGAAGAGGCATAATGCCAAAGAACATGGAGGGAACATGTCTCGCTCCCGGCGTAATGCTGCTCTTCAGATACCAATAAGCTTCCGGTGTAGGAGAAGTAATGAGGAAGATCATCATGGACCCCATAGTGGAGGACATGTTTCTGATGTTGATGCTGAAGATAATCGACTTTTCCTGACTGTTCAAGCTAGTCTCGATACAGCCAATGCAGAAAGGTTTCGTAATACATCCTCTAGTGTCCAAGCAGTTTTTGATCGTCGAAGAGCAAGTGACTCTGTGATTATTGCTGGCCGTTTTGAGTCATTAGCTACTACAGAAACTGAGTCATCTGTAAGATGCTCTAATGCTTCAAGAGAAAACTCTCGTAATGTACTAGCAGAAGAATCAGCCTTCCCTCCACTTCCTCTGGCTCAAAGTAGCAGGCGACAGAAGTTTAGAAATGGTTCCGAACGGATGGATGGTAGCACAATGGCATCTCGAGTTCGTCGCCTTAATACCGTTAATGTCCTTAATTCTTCTTCAGCTTGGCCCACAGCAAGGCGCCAACCTAAATCATCTGCCAGTAGTTCTCACCACTTATCATCATCTAGTTCTTCTGTATTTTCCCAGAGTAATACTGCAACTATTAATGGTACTATGCCTTCTGGATATGCAAGCTCTGGTCCAGTGAGACAAGCTGCAGCTAATGGTTTTGTATCATCCAATTTTCTTAGCACAGGGAAGTCACCTAGCACTAGTAAGGTTGGCCACTCTACTTCAGCTCCAAACCTTGTTGAGAGAGGATCTATAGACTCTGATTTTCCTACTGTATCTGCTACTCGAACTAATAGAGAACCTGCAAATAGTCAGACAATAATACCCAAGGTCGGAGATGTTCAGACTGCCAACAAGTCCCTTGTAGAAAAAATCCGTGATGCTGTAGAATTTGATGAGAGCAAATTCACTGCATTTAAAGAAATATCTGGAAAGTACCGCAAGGATCTAATCAACACCGGGGAATATCTGGCCTGTGTGGACCAGTTTGGCCTGTCACACTTGGTTCTTGAGCTAGCTCAACTGTGTCCTGATGCTGAGAAGCGAAGAGAGCTTGTTGAGACTTACAATTTCAATATGAAGAGCAGTCGTTCTCATGGAATCAATTTGAGTATTGGTGGTGGCAAGTCAAAGAGCAGTTCCAAGAAAGGCAAGGAAAAATGTGTAGGTAATGGGATCAGTAGTTTAAAAGATGCTTTGAAGTTGAATTGTAAACCTCCTGTTGAAGATGCAGCGGTCGTATTGAAGAATGATCATTGCTGCAGCAAAGGAAAGTCAAAGATATCAGTTGAGGATGAACAGATCAACCTGGATTCTGGGAATCATATGCCGATGGGTCAGAATGGTTCTCAGTCAGCTGGTGGCAGCTCAAAGAAAAATTTAGGGAAAGGAGCTAATAAGCAACAAAAGAAGGTTCCCAAGTTTCTTAGAAACCGTCTTGGTGATGATGCTGTAGCACTTGCAGAACTTGATGATGCTGAAACCGGTCCTGACCTGATTGAAGAAAAAACAGAAAGAGACAAGGATCCCCCCGAAGGGTTGCCAGTTCGTGGTGTTTGGCAAAATGGAGGTGGCCATAGACTTGTGAAATTGACCATGAGAAACCCTCCGAAACGAGGAGTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

941

Amino Acids

103.29

Weight (kDa)

8.83

Isoelectric Point (pI)

47.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RING_ZNF598 PF25447 118 - 173 9.4e-07 ZNF598 RING finger domain
zf-C2H2_13 PF23230 335 - 391 2.4e-15 C2H2-type zinc finger
PAH_ZNF598 PF23202 680 - 755 4.7e-21 ZNF598 PAH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 440
Acc36I ACCTGC 2 cut(s) 440, 2005
Acc65I GGTACC 1 cut(s) 600
AccB1I GGYRCC 2 cut(s) 600, 1701
AccB7I CCANNNNNTGG 2 cut(s) 965, 2744
AccI GTMKAC 1 cut(s) 995
AciI CCGC 2 cut(s) 2134, 2429
AclWI GGATC 7 cut(s) 25, 870, 1951, 2148, 2378, 2714, 2727
AcoI YGGCCR 4 cut(s) 409, 1450, 1906, 2767
AcsI RAATTY 5 cut(s) 734, 1133, 2084, 2099, 2572
AcuI CTGAAG 4 cut(s) 1211, 1338, 1665, 1902
AcyI GRCGYC 1 cut(s) 1702
AfaI GTAC 5 cut(s) 602, 983, 1533, 1795, 2132
AflIII ACRYGT 2 cut(s) 1197, 1297
AgeI ACCGGT 1 cut(s) 2678
AhlI ACTAGT 1 cut(s) 1895
AjnI CCWGG 6 cut(s) 148, 160, 211, 253, 1036, 2502
Alw26I GTCTC 7 cut(s) 371, 869, 1206, 1358, 1825, 2249, 2706
AlwI GGATC 7 cut(s) 25, 870, 1951, 2148, 2378, 2714, 2727
AlwNI CAGNNNCTG 1 cut(s) 1481
Ama87I CYCGRG 1 cut(s) 1638
AoxI GGCC 8 cut(s) 157, 409, 1450, 1688, 1906, 2166, 2185, 2767
ApoI RAATTY 5 cut(s) 734, 1133, 2084, 2099, 2572
ArsI GACNNNNNNTTYG 2 cut(s) 1018, 1050
AseI ATTAAT 2 cut(s) 696, 1788
AsiGI ACCGGT 1 cut(s) 2678
Asp700I GAANNNNTTC 2 cut(s) 1377, 1603
Asp718I GGTACC 1 cut(s) 600
AspLEI GCGC 2 cut(s) 1096, 1704
AspS9I GGNCC 8 cut(s) 19, 158, 590, 1280, 1689, 1823, 2176, 2681
AsuC2I CCSGG 2 cut(s) 1210, 2155
AsuHPI GGTGA 6 cut(s) 502, 536, 893, 1724, 1878, 2648
AsuNHI GCTAGC 1 cut(s) 2209
AvaI CYCGRG 1 cut(s) 1638
AvaII GGWCC 6 cut(s) 19, 590, 1280, 1823, 2176, 2681
BalI TGGCCA 3 cut(s) 411, 1908, 2769
BamHI GGATCC 1 cut(s) 2719
BanI GGYRCC 2 cut(s) 600, 1701
BarI GAAGNNNNNNTAC 2 cut(s) 1786, 1818
BbsI GAAGAC 1 cut(s) 92
BccI CCATC 6 cut(s) 199, 420, 890, 1609, 1613, 2521
BceAI ACGGC 1 cut(s) 1437
BcgI CGANNNNNNTGC 4 cut(s) 344, 378, 405, 439
BciT130I CCWGG 6 cut(s) 150, 162, 213, 255, 1038, 2504
BclI TGATCA 2 cut(s) 637, 2446
BcnI CCSGG 2 cut(s) 1210, 2155
BcoDI GTCTC 7 cut(s) 371, 869, 1206, 1358, 1825, 2249, 2706
BcuI ACTAGT 1 cut(s) 1895
BfaI CTAG 7 cut(s) 1350, 1395, 1535, 1749, 1890, 1896, 2210
BfmI CTRYAG 8 cut(s) 676, 1054, 1473, 1839, 1947, 2079, 2455, 2646
BfoI RGCGCY 1 cut(s) 1705
BfuAI ACCTGC 2 cut(s) 440, 2005
BglI GCCNNNNNGGC 1 cut(s) 195
Bme1390I CCNGG 8 cut(s) 150, 162, 213, 255, 1038, 1210, 2155, 2504
Bme18I GGWCC 6 cut(s) 19, 590, 1280, 1823, 2176, 2681
BmeT110I CYCGRG 1 cut(s) 1638
BmgT120I GGNCC 8 cut(s) 19, 158, 590, 1280, 1689, 1823, 2176, 2681
BmiI GGNNCC 7 cut(s) 403, 602, 1282, 1606, 1703, 2610, 2721
BmrFI CCNGG 8 cut(s) 150, 162, 213, 255, 1038, 1210, 2155, 2504
BmtI GCTAGC 1 cut(s) 2213
BpiI GAAGAC 1 cut(s) 92
BplI GAGNNNNNCTC 4 cut(s) 410, 442, 2785, 2817
BpmI CTGGAG 1 cut(s) 153
Bpu10I CCTNAGC 1 cut(s) 154
BpuEI CTTGAG 1 cut(s) 2225
BpuMI CCSGG 2 cut(s) 1210, 2155
BsaBI GATNNNNATC 2 cut(s) 636, 824
BsaHI GRCGYC 1 cut(s) 1702
BsaJI CCNNGG 6 cut(s) 148, 160, 211, 513, 2022, 2154
BsaWI WCCGGW 2 cut(s) 1245, 2678
BsaXI ACNNNNNCTCC 4 cut(s) 1284, 1314, 1906, 1936
Bse118I RCCGGY 2 cut(s) 233, 2678
Bse1I ACTGG 6 cut(s) 178, 602, 1722, 1826, 2179, 2738
Bse3DI GCAATG 2 cut(s) 469, 2449
Bse8I GATNNNNATC 2 cut(s) 636, 824
BseBI CCWGG 6 cut(s) 150, 162, 213, 255, 1038, 2504
BseDI CCNNGG 6 cut(s) 148, 160, 211, 513, 2022, 2154
BseGI GGATG 9 cut(s) 106, 224, 543, 1117, 1388, 1620, 1624, 1859, 2494
BseJI GATNNNNATC 2 cut(s) 636, 824
BseMI GCAATG 2 cut(s) 469, 2449
BseMII CTCAG 4 cut(s) 168, 1473, 2223, 2558
BseNI ACTGG 6 cut(s) 178, 602, 1722, 1826, 2179, 2738
BseRI GAGGAG 2 cut(s) 141, 558
BsgI GTGCAG 5 cut(s) 187, 393, 418, 685, 814
Bsh1285I CGRYCG 1 cut(s) 2433
BshFI GGCC 8 cut(s) 159, 411, 1452, 1690, 1908, 2168, 2187, 2769
BshNI GGYRCC 2 cut(s) 600, 1701
BshTI ACCGGT 1 cut(s) 2678
BsiEI CGRYCG 1 cut(s) 2433
BsiHKCI CYCGRG 1 cut(s) 1638
BsiSI CCGG 5 cut(s) 234, 1210, 1246, 2154, 2679
BslFI GGGAC 2 cut(s) 209, 2038
BsmAI GTCTC 7 cut(s) 371, 869, 1206, 1358, 1825, 2249, 2706
BsmFI GGGAC 2 cut(s) 209, 2038
BsnI GGCC 8 cut(s) 159, 411, 1452, 1690, 1908, 2168, 2187, 2769
BsoBI CYCGRG 1 cut(s) 1638
Bsp1407I TGTACA 1 cut(s) 981
BspACI CCGC 2 cut(s) 2134, 2429
BspANI GGCC 8 cut(s) 159, 411, 1452, 1690, 1908, 2168, 2187, 2769
BspCNI CTCAG 4 cut(s) 167, 1474, 2224, 2557
BspLI GGNNCC 7 cut(s) 403, 602, 1282, 1606, 1703, 2610, 2721
BspMAI CTGCAG 2 cut(s) 1843, 2459
BspMI ACCTGC 2 cut(s) 440, 2005
BspOI GCTAGC 1 cut(s) 2213
BspPI GGATC 7 cut(s) 25, 870, 1951, 2148, 2378, 2714, 2727
BspQI GCTCTTC 3 cut(s) 1230, 1417, 2270
BspT107I GGYRCC 2 cut(s) 600, 1701
BsrDI GCAATG 2 cut(s) 469, 2449
BsrFI RCCGGY 2 cut(s) 233, 2678
BsrGI TGTACA 1 cut(s) 981
BsrI ACTGG 6 cut(s) 178, 602, 1722, 1826, 2179, 2738
BssAI RCCGGY 2 cut(s) 233, 2678
BssECI CCNNGG 6 cut(s) 148, 160, 211, 513, 2022, 2154
BssNI GRCGYC 1 cut(s) 1702
BssT1I CCWWGG 2 cut(s) 513, 2022
Bst2UI CCWGG 6 cut(s) 150, 162, 213, 255, 1038, 2504
Bst4CI ACNGT 8 cut(s) 40, 1044, 1058, 1342, 1660, 1969, 2220, 2630
Bst6I CTCTTC 5 cut(s) 1160, 1230, 1417, 2236, 2270
BstACI GRCGYC 1 cut(s) 1702
BstAPI GCANNNNNTGC 1 cut(s) 801
BstAUI TGTACA 1 cut(s) 981
BstC8I GCNNGC 6 cut(s) 668, 1120, 1450, 1583, 1816, 2211
BstDEI CTNAG 7 cut(s) 154, 495, 1482, 1871, 2232, 2544, 2621
BstF5I GGATG 9 cut(s) 106, 224, 543, 1117, 1388, 1620, 1624, 1859, 2494
BstH2I RGCGCY 1 cut(s) 1705
BstHHI GCGC 2 cut(s) 1096, 1704
BstMAI GTCTC 7 cut(s) 371, 869, 1206, 1358, 1825, 2249, 2706
BstMCI CGRYCG 1 cut(s) 2433
BstNI CCWGG 6 cut(s) 150, 162, 213, 255, 1038, 2504
BstNSI RCATGY 3 cut(s) 988, 1201, 1301
BstSCI CCNGG 8 cut(s) 148, 160, 211, 253, 1036, 1208, 2153, 2502
BstSFI CTRYAG 8 cut(s) 676, 1054, 1473, 1839, 1947, 2079, 2455, 2646
BstV2I GAAGAC 1 cut(s) 92
BstX2I RGATCY 3 cut(s) 1943, 2140, 2719
BstYI RGATCY 3 cut(s) 1943, 2140, 2719
BsuRI GGCC 8 cut(s) 159, 411, 1452, 1690, 1908, 2168, 2187, 2769
BtsCI GGATG 9 cut(s) 106, 224, 543, 1117, 1388, 1620, 1624, 1859, 2494
BtsI GCAGTG 3 cut(s) 54, 907, 2103
BtsIMutI CAGTG 4 cut(s) 54, 907, 1833, 2103
BveI ACCTGC 2 cut(s) 440, 2005
Cac8I GCNNGC 6 cut(s) 668, 1120, 1450, 1583, 1816, 2211
CaiI CAGNNNCTG 1 cut(s) 1481
CfoI GCGC 2 cut(s) 1096, 1704
Cfr10I RCCGGY 2 cut(s) 233, 2678
Cfr13I GGNCC 8 cut(s) 19, 158, 590, 1280, 1689, 1823, 2176, 2681
CseI GACGC 1 cut(s) 1022
Csp6I GTAC 5 cut(s) 601, 982, 1532, 1794, 2131
CspAI ACCGGT 1 cut(s) 2678
CviAII CATG 9 cut(s) 605, 661, 985, 1187, 1198, 1277, 1298, 2291, 2791
CviQI GTAC 5 cut(s) 601, 982, 1532, 1794, 2131
DdeI CTNAG 7 cut(s) 154, 495, 1482, 1871, 2232, 2544, 2621
DinI GGCGCC 1 cut(s) 1703
DraI TTTAAA 3 cut(s) 739, 2113, 2382
EaeI YGGCCR 4 cut(s) 409, 1450, 1906, 2767
Eam1104I CTCTTC 5 cut(s) 1160, 1230, 1417, 2236, 2270
EarI CTCTTC 5 cut(s) 1160, 1230, 1417, 2236, 2270
Eco130I CCWWGG 2 cut(s) 513, 2022
Eco32I GATATC 1 cut(s) 2478
Eco47I GGWCC 6 cut(s) 19, 590, 1280, 1823, 2176, 2681
Eco57I CTGAAG 4 cut(s) 1211, 1338, 1665, 1902
Eco88I CYCGRG 1 cut(s) 1638
EcoO109I RGGNCCY 1 cut(s) 19
EcoRII CCWGG 6 cut(s) 148, 160, 211, 253, 1036, 2502
EcoRV GATATC 1 cut(s) 2478
EcoT14I CCWWGG 2 cut(s) 513, 2022
EcoT22I ATGCAT 1 cut(s) 990
EgeI GGCGCC 1 cut(s) 1703
EheI GGCGCC 1 cut(s) 1703
ErhI CCWWGG 2 cut(s) 513, 2022
FaeI CATG 9 cut(s) 608, 664, 988, 1190, 1201, 1280, 1301, 2294, 2794
FalI AAGNNNNNCTT 2 cut(s) 488, 520
FaqI GGGAC 2 cut(s) 209, 2038
FatI CATG 9 cut(s) 604, 660, 984, 1186, 1197, 1276, 1297, 2290, 2790
FauNDI CATATG 3 cut(s) 397, 990, 2520
FbaI TGATCA 2 cut(s) 637, 2446
FblI GTMKAC 1 cut(s) 995
FokI GGATG 9 cut(s) 93, 231, 550, 1124, 1375, 1627, 1631, 1846, 2501
FspBI CTAG 7 cut(s) 1350, 1395, 1535, 1749, 1890, 1896, 2210
GlaI GCGC 2 cut(s) 1095, 1703
GsuI CTGGAG 1 cut(s) 153
HaeII RGCGCY 1 cut(s) 1705
HaeIII GGCC 8 cut(s) 159, 411, 1452, 1690, 1908, 2168, 2187, 2769
HapII CCGG 5 cut(s) 234, 1210, 1246, 2154, 2679
HgaI GACGC 1 cut(s) 1022
HhaI GCGC 2 cut(s) 1096, 1704
Hin1I GRCGYC 1 cut(s) 1702
Hin1II CATG 9 cut(s) 608, 664, 988, 1190, 1201, 1280, 1301, 2294, 2794
Hin6I GCGC 2 cut(s) 1094, 1702
HinP1I GCGC 2 cut(s) 1094, 1702
HincII GTYRAC 2 cut(s) 325, 584
HindII GTYRAC 2 cut(s) 325, 584
HindIII AAGCTT 1 cut(s) 1240
HpaII CCGG 5 cut(s) 234, 1210, 1246, 2154, 2679
HphI GGTGA 6 cut(s) 502, 536, 893, 1724, 1878, 2648
Hpy166II GTNNAC 6 cut(s) 314, 325, 584, 996, 2176, 2408
Hpy8I GTNNAC 6 cut(s) 314, 325, 584, 996, 2176, 2408
Hpy99I CGWCG 2 cut(s) 1422, 1650
HpyAV CCTTC 6 cut(s) 602, 807, 1561, 1812, 2599, 2723
HpyCH4III ACNGT 8 cut(s) 40, 1044, 1058, 1342, 1660, 1969, 2220, 2630
HpyF3I CTNAG 7 cut(s) 154, 495, 1482, 1871, 2232, 2544, 2621
Hsp92I GRCGYC 1 cut(s) 1702
Hsp92II CATG 9 cut(s) 608, 664, 988, 1190, 1201, 1280, 1301, 2294, 2794
HspAI GCGC 2 cut(s) 1094, 1702
KasI GGCGCC 1 cut(s) 1701
KpnI GGTACC 1 cut(s) 604
Ksp22I TGATCA 2 cut(s) 637, 2446
LguI GCTCTTC 3 cut(s) 1230, 1417, 2270
LmnI GCTCC 5 cut(s) 128, 431, 1211, 1927, 2585
MaeI CTAG 7 cut(s) 1350, 1395, 1535, 1749, 1890, 1896, 2210
MaeIII GTNAC 6 cut(s) 508, 524, 1058, 1430, 1884, 2190
MfeI CAATTG 1 cut(s) 857
MflI RGATCY 3 cut(s) 1943, 2140, 2719
MlsI TGGCCA 3 cut(s) 411, 1908, 2769
MluNI TGGCCA 3 cut(s) 411, 1908, 2769
Mly113I GGCGCC 1 cut(s) 1702
MlyI GAGTC 5 cut(s) 330, 1427, 1469, 1493, 1946
MmeI TCCRAC 1 cut(s) 2008
Mox20I TGGCCA 3 cut(s) 411, 1908, 2769
Mph1103I ATGCAT 1 cut(s) 990
MroXI GAANNNNTTC 2 cut(s) 1377, 1603
MscI TGGCCA 3 cut(s) 411, 1908, 2769
MseI TTAA 9 cut(s) 696, 738, 924, 1653, 1662, 1671, 1788, 2112, 2381
MslI CAYNNNNRTG 2 cut(s) 385, 989
Msp20I TGGCCA 3 cut(s) 411, 1908, 2769
MspA1I CMGCKG 3 cut(s) 754, 2429, 2552
MspI CCGG 5 cut(s) 234, 1210, 1246, 2154, 2679
MspR9I CCNGG 8 cut(s) 150, 162, 213, 255, 1038, 1210, 2155, 2504
MunI CAATTG 1 cut(s) 857
MvaI CCWGG 6 cut(s) 150, 162, 213, 255, 1038, 2504
NarI GGCGCC 1 cut(s) 1702
NciI CCSGG 2 cut(s) 1210, 2155
NdeI CATATG 3 cut(s) 397, 990, 2520
NheI GCTAGC 1 cut(s) 2209
NlaIII CATG 9 cut(s) 608, 664, 988, 1190, 1201, 1280, 1301, 2294, 2794
NlaIV GGNNCC 7 cut(s) 403, 602, 1282, 1606, 1703, 2610, 2721
NmuCI GTSAC 5 cut(s) 508, 524, 1430, 1884, 2190
NsiI ATGCAT 1 cut(s) 990
NspI RCATGY 3 cut(s) 988, 1201, 1301
PaeR7I CTCGAG 1 cut(s) 1638
PaqCI CACCTGC 1 cut(s) 440
PciI ACATGT 2 cut(s) 1197, 1297
PciSI GCTCTTC 3 cut(s) 1230, 1417, 2270
PcsI WCGNNNNNNNCGW 1 cut(s) 1210
PdmI GAANNNNTTC 2 cut(s) 1377, 1603
PflMI CCANNNNNTGG 2 cut(s) 965, 2744
PfoI TCCNGGA 1 cut(s) 1036
PinAI ACCGGT 1 cut(s) 2678
PleI GAGTC 5 cut(s) 329, 1427, 1468, 1492, 1946
PluTI GGCGCC 1 cut(s) 1705
PpsI GAGTC 5 cut(s) 329, 1427, 1468, 1492, 1946
PpuMI RGGWCCY 1 cut(s) 19
PscI ACATGT 2 cut(s) 1197, 1297
PshBI ATTAAT 2 cut(s) 696, 1788
Psp5II RGGWCCY 1 cut(s) 19
Psp6I CCWGG 6 cut(s) 148, 160, 211, 253, 1036, 2502
PspGI CCWGG 6 cut(s) 148, 160, 211, 253, 1036, 2502
PspN4I GGNNCC 7 cut(s) 403, 602, 1282, 1606, 1703, 2610, 2721
PspPI GGNCC 8 cut(s) 19, 158, 590, 1280, 1689, 1823, 2176, 2681
PspPPI RGGWCCY 1 cut(s) 19
PstI CTGCAG 2 cut(s) 1843, 2459
PstNI CAGNNNCTG 1 cut(s) 1481
PsuI RGATCY 3 cut(s) 1943, 2140, 2719
PvuII CAGCTG 2 cut(s) 754, 2552
RsaI GTAC 5 cut(s) 602, 983, 1533, 1795, 2132
RsaNI GTAC 5 cut(s) 601, 982, 1532, 1794, 2131
RseI CAYNNNNRTG 2 cut(s) 385, 989
SapI GCTCTTC 3 cut(s) 1230, 1417, 2270
SaqAI TTAA 9 cut(s) 696, 738, 924, 1653, 1662, 1671, 1788, 2112, 2381
Sau96I GGNCC 8 cut(s) 19, 158, 590, 1280, 1689, 1823, 2176, 2681
SchI GAGTC 5 cut(s) 330, 1427, 1469, 1493, 1946
ScrFI CCNGG 8 cut(s) 150, 162, 213, 255, 1038, 1210, 2155, 2504
SfcI CTRYAG 8 cut(s) 676, 1054, 1473, 1839, 1947, 2079, 2455, 2646
SfoI GGCGCC 1 cut(s) 1703
Sfr274I CTCGAG 1 cut(s) 1638
SinI GGWCC 6 cut(s) 19, 590, 1280, 1823, 2176, 2681
SlaI CTCGAG 1 cut(s) 1638
SmiMI CAYNNNNRTG 2 cut(s) 385, 989
SmlI CTYRAG 2 cut(s) 1638, 2204
SmoI CTYRAG 2 cut(s) 1638, 2204
SpeI ACTAGT 1 cut(s) 1895
SsiI CCGC 2 cut(s) 2134, 2429
SspDI GGCGCC 1 cut(s) 1701
SspMI CTAG 7 cut(s) 1350, 1395, 1535, 1749, 1890, 1896, 2210
StyD4I CCNGG 8 cut(s) 148, 160, 211, 253, 1036, 1208, 2153, 2502
StyI CCWWGG 2 cut(s) 513, 2022
TaaI ACNGT 8 cut(s) 40, 1044, 1058, 1342, 1660, 1969, 2220, 2630
TaqI TCGA 7 cut(s) 415, 719, 1327, 1356, 1420, 1639, 1981
TatI WGTACW 2 cut(s) 981, 1531
Tru1I TTAA 9 cut(s) 696, 738, 924, 1653, 1662, 1671, 1788, 2112, 2381
Tru9I TTAA 9 cut(s) 696, 738, 924, 1653, 1662, 1671, 1788, 2112, 2381
TscAI CASTG 4 cut(s) 54, 907, 1833, 2110
TseFI GTSAC 5 cut(s) 508, 524, 1430, 1884, 2190
Tsp45I GTSAC 5 cut(s) 508, 524, 1430, 1884, 2190
TspGWI ACGGA 3 cut(s) 437, 1627, 2060
TspRI CASTG 4 cut(s) 54, 907, 1833, 2110
Van91I CCANNNNNTGG 2 cut(s) 965, 2744
VpaK11BI GGWCC 6 cut(s) 19, 590, 1280, 1823, 2176, 2681
VspI ATTAAT 2 cut(s) 696, 1788
XapI RAATTY 5 cut(s) 734, 1133, 2084, 2099, 2572
XceI RCATGY 3 cut(s) 988, 1201, 1301
XcmI CCANNNNNNNNNTGG 1 cut(s) 119
XhoI CTCGAG 1 cut(s) 1638
XmiI GTMKAC 1 cut(s) 995
XmnI GAANNNNTTC 2 cut(s) 1377, 1603
XspI CTAG 7 cut(s) 1350, 1395, 1535, 1749, 1890, 1896, 2210
Zsp2I ATGCAT 1 cut(s) 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.