Rh3DG090200

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000854
Physical Location & Seq
Forward (+)
6947640 .. 6951812
4173 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG090200.1

Sequence Viewer

Length: 2571 bp
ATGTTAAAGGTTGTTGCTTTTTACTGTGTGGGTTATTGTTGTAACATTATTGAAACCGATGATGCATACTATTTGGCAGAAAAGAGAAGAAAAACAATGGACGATAGCTGTGCTGTCTGTGCAGAGACACTTCAATGGGTCGCATATGGTCCCTGTGGCCATCGAGAGGTCTGCTCCACCTGCACTATTCGCCTCCGTTTCATCTGTGGAGATTCCCATTGCTGCCTCTGCAAGAGTGAATCTAAGATCATCTTTGTCACCAAGGCGTTAGGCGACTATACAAGGATGATAAATGATTTTTCTGTTTTGCCAACTCCTCTAATGGAGGGTCAACTTGGACCATACTGGTACCATGAAGGAACACAAGCCTTTTTTGATGATGTTGATCACTACAAGATGATAAAGACCATGTGCAGGCTATCCTGTAGTCTTTGTAATAAGATTAATGAACAAAGGAGTGAGGGGTTGAAGAAAAAAGGGGAATTTAAAAATGTTGAGCAGCTGAAAAGTCATTTGTTTCATCGGCATAGGCTGTTTATGTGCAGTCTATGCTTGGAGGGAAGGAAGATATTTATCTGTGAGCAAAAGTTATATACTAAAGCACAATTGGATCGGCATACAGAGACAGGTGATTCAGAGGTAGATGGCAGTGAGAGTGAAAGAGGTGGGTTTAATGGACACCCTATGTGTGAGTTTTGCAAGAATCCATTTTATGGAGATAATGAGCTGTACATGCATATGTCTACCGAGCATTTTACTTGTCATATATGCCAAAGGCAGCGTCCAGGACAGTATGAATACTACAGTAACTATGACAACTTGGAGATTCATTTTCAACAAGCGCACTTCTTATGCAAGGATGATGCCTGCCTAACAAAAAAATTTGTTGTTTTTGCAACTGAATCTGAAATGAAGAGGCATAATGCCAAAGAACATGGAGGGAACATGTCTCGCTCCCGGCGTAATGCTGCTCTTCAGATACCAATAAGCTTCCGGTGTAGGAGAAGTAATGAGGAAGATCATCATGGACCCCATAGTGGAGGACATGTTTCTGATGTTGATGCTGAAGATAATCGACTTTTCCTGACTGTTCAAGCTAGTGTTGATACAGCCAATGCAGAAAGGTTTCGTAATACATCCTCTAGTGTCCAAGCAGTTTTTGATCGTCGAAGAGCAAGTGACTCTGTGATTATTGCTGGCCGTTTTGAGTCATTAGCTACTACAGAAACTGAGTCATCTGTAAGATGCTCTAATGCATCAAGAGAAAACTCTCGTAATGTACTAGCAGAAGAATCAGCCTTCCCTCCACTTCCTCTGGCTCAAAGTAGCAGGCGACAGAAGTTTAGAAATGGTTCCGAACGGATGGATGGTAGCACAATGGCATCTCGAGTTCGTCGCCTTAATACCGTAAATGTCCTTAATTCTTCTTCAGCTTGGCCAACAGCCAGGCGTCAACCTAAATCATCTGCCAGTAGTTCTCACCAGTTATCATCATCTAGTTCTTCTGTATTTTCCCAGAGTAATACTGCAACTATTAATAGGACTATGCCTTCTGGATATGCAAGCTCTGGTCCAGTGAGACAAGCTGCAGCTAATGGTTTTGTATCATCCAATTTTCTTAGCACAGGGAAGTCACCTAGCACTAGTAAGGTTGGCCACTCTACTTCAGCTCCAAGCCTTGTTGAGAGAGGATCTATAGACTCTGATTTTCCTACTGTATCTGCTACTCAAACTAATAGAGAACCTGCAAATAGTCAGACAATAATACCCAAGGTCGGAGATGTTCAGACTGCCAACAAGTCCCTTGTAGAAAAAATCCGTGATGCTTTAGAATTTGATGAGAGCAAATTCACTGCATTTAAAGAAATATCTGGAAAGTACCGCAAGGATCTAATCAACACCGGGGAATATCTGGCCTGTGTGGACCAGTTTGGCCTGTCACACTTGGTTCTTGAGCTAGCTCAACTGTGTCCTGATGCTGAGAAGCGAAGAGAGCTTGTTGAGACTTACAATTTCAATATGAAGAGCAGTCGTTCTCATGGAATCAATTTGAGTATTGGTGGTGGCAAGTCAAAGAGCAGTTCCAAGAAAGGCAAGGAAAAATGTGTAGATAATGGGATCAGTAGTTCAAAAGATGCTTTGAAGTTGAATTGTAAACCTCCTGTCGAAGATGCAGCGGTCGTATTGAAGAATGATCATTGCTGCAGCAAAGGAAAGTCAAAGATATCAGTTGAGGATGAACAGATCAACCTGGATTCTGGGAATCATATGCCGATGGGTCAGAATGGTTCTCAGTCAGCTGGTGGCAGCTCAAAGAAAAATTTGGGGAAAGGAGCTAATAAGCAACAAAAGAAGGTTCCCAAGTTTCTTAGAAACCGTCTTGGTGATGATGCTGTAGCACTTGCAGAACTTGGTGATGCTGAAACCGGTCCTGACCTGATTGAAGAAAAAACAGATACAGACAAGGATCCCCCTGAAGGGTTGCCAGTTCGTGGTGTTTGGCAAAATGGAGGTGGCCATAGACTTGTGAAATTGACCATGAGAAACCCTCCAAAACGAGGAGTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

856

Amino Acids

95.03

Weight (kDa)

8.64

Isoelectric Point (pI)

49.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RING_ZNF598 PF25447 34 - 89 1e-06 ZNF598 RING finger domain
zf-C2H2_13 PF23230 251 - 307 2.1e-15 C2H2-type zinc finger
PAH_ZNF598 PF23202 596 - 671 9.8e-22 ZNF598 PAH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 188
Acc36I ACCTGC 2 cut(s) 188, 1753
Acc65I GGTACC 1 cut(s) 348
AccB1I GGYRCC 1 cut(s) 348
AccB7I CCANNNNNTGG 2 cut(s) 713, 2492
AccI GTMKAC 1 cut(s) 743
AciI CCGC 2 cut(s) 1882, 2177
AclWI GGATC 6 cut(s) 618, 1699, 1896, 2126, 2462, 2475
AcoI YGGCCR 5 cut(s) 157, 1198, 1436, 1654, 2515
AcsI RAATTY 5 cut(s) 482, 881, 1832, 1847, 2320
AcuI CTGAAG 5 cut(s) 959, 1086, 1413, 1650, 2496
AcyI GRCGYC 1 cut(s) 1450
AfaI GTAC 4 cut(s) 350, 731, 1281, 1880
AfiI CCNNNNNNNGG 9 cut(s) 166, 414, 713, 1037, 1775, 2477, 2478, 2492, 2558
AflIII ACRYGT 2 cut(s) 945, 1045
AgeI ACCGGT 1 cut(s) 2426
AhlI ACTAGT 1 cut(s) 1643
AjnI CCWGG 3 cut(s) 784, 1445, 2250
AloI GAACNNNNNNTCC 2 cut(s) 2110, 2142
Alw26I GTCTC 5 cut(s) 119, 617, 954, 1573, 1997
AlwI GGATC 6 cut(s) 618, 1699, 1896, 2126, 2462, 2475
AlwNI CAGNNNCTG 1 cut(s) 1229
Ama87I CYCGRG 1 cut(s) 1386
AoxI GGCC 7 cut(s) 157, 1198, 1436, 1654, 1914, 1933, 2515
ApoI RAATTY 5 cut(s) 482, 881, 1832, 1847, 2320
ArsI GACNNNNNNTTYG 2 cut(s) 766, 798
AseI ATTAAT 2 cut(s) 444, 1536
AsiGI ACCGGT 1 cut(s) 2426
Asp700I GAANNNNTTC 2 cut(s) 1125, 1351
Asp718I GGTACC 1 cut(s) 348
AspLEI GCGC 1 cut(s) 844
AspS9I GGNCC 6 cut(s) 149, 338, 1028, 1571, 1924, 2429
AsuC2I CCSGG 2 cut(s) 958, 1903
AsuHPI GGTGA 6 cut(s) 250, 641, 1472, 1626, 2396, 2426
AsuNHI GCTAGC 1 cut(s) 1957
AvaI CYCGRG 1 cut(s) 1386
AvaII GGWCC 6 cut(s) 149, 338, 1028, 1571, 1924, 2429
BalI TGGCCA 4 cut(s) 159, 1438, 1656, 2517
BamHI GGATCC 1 cut(s) 2467
BanI GGYRCC 1 cut(s) 348
BccI CCATC 5 cut(s) 168, 638, 1357, 1361, 2269
BceAI ACGGC 1 cut(s) 1185
BcgI CGANNNNNNTGC 4 cut(s) 92, 126, 153, 187
BciT130I CCWGG 3 cut(s) 786, 1447, 2252
BclI TGATCA 2 cut(s) 385, 2194
BcnI CCSGG 2 cut(s) 958, 1903
BcoDI GTCTC 5 cut(s) 119, 617, 954, 1573, 1997
BcuI ACTAGT 1 cut(s) 1643
BfaI CTAG 7 cut(s) 1098, 1143, 1283, 1497, 1638, 1644, 1958
BfmI CTRYAG 7 cut(s) 424, 802, 1221, 1587, 1695, 2203, 2394
BfuAI ACCTGC 2 cut(s) 188, 1753
Bme1390I CCNGG 5 cut(s) 786, 958, 1447, 1903, 2252
Bme18I GGWCC 6 cut(s) 149, 338, 1028, 1571, 1924, 2429
BmeT110I CYCGRG 1 cut(s) 1386
BmgT120I GGNCC 6 cut(s) 149, 338, 1028, 1571, 1924, 2429
BmiI GGNNCC 6 cut(s) 151, 350, 1030, 1354, 2358, 2469
BmrFI CCNGG 5 cut(s) 786, 958, 1447, 1903, 2252
BmtI GCTAGC 1 cut(s) 1961
BplI GAGNNNNNCTC 4 cut(s) 158, 190, 2533, 2565
BpuEI CTTGAG 1 cut(s) 1973
BpuMI CCSGG 2 cut(s) 958, 1903
BsaBI GATNNNNATC 2 cut(s) 384, 572
BsaHI GRCGYC 1 cut(s) 1450
BsaJI CCNNGG 3 cut(s) 261, 1770, 1902
BsaWI WCCGGW 2 cut(s) 993, 2426
BsaXI ACNNNNNCTCC 4 cut(s) 1032, 1062, 1654, 1684
Bsc4I CCNNNNNNNGG 9 cut(s) 166, 414, 713, 1037, 1775, 2477, 2478, 2492, 2558
Bse118I RCCGGY 1 cut(s) 2426
Bse1I ACTGG 6 cut(s) 350, 1470, 1483, 1574, 1927, 2486
Bse3DI GCAATG 2 cut(s) 217, 2197
Bse8I GATNNNNATC 2 cut(s) 384, 572
BseBI CCWGG 3 cut(s) 786, 1447, 2252
BseDI CCNNGG 3 cut(s) 261, 1770, 1902
BseGI GGATG 7 cut(s) 291, 865, 1136, 1368, 1372, 1607, 2242
BseJI GATNNNNATC 2 cut(s) 384, 572
BseLI CCNNNNNNNGG 9 cut(s) 166, 414, 713, 1037, 1775, 2477, 2478, 2492, 2558
BseMI GCAATG 2 cut(s) 217, 2197
BseMII CTCAG 3 cut(s) 1221, 1971, 2306
BseNI ACTGG 6 cut(s) 350, 1470, 1483, 1574, 1927, 2486
BseRI GAGGAG 1 cut(s) 306
BsgI GTGCAG 4 cut(s) 141, 166, 433, 562
Bsh1285I CGRYCG 1 cut(s) 2181
BshFI GGCC 7 cut(s) 159, 1200, 1438, 1656, 1916, 1935, 2517
BshNI GGYRCC 1 cut(s) 348
BshTI ACCGGT 1 cut(s) 2426
BsiEI CGRYCG 1 cut(s) 2181
BsiHKCI CYCGRG 1 cut(s) 1386
BsiSI CCGG 4 cut(s) 958, 994, 1902, 2427
BslFI GGGAC 2 cut(s) 135, 1786
BslI CCNNNNNNNGG 9 cut(s) 166, 414, 713, 1037, 1775, 2477, 2478, 2492, 2558
BsmAI GTCTC 5 cut(s) 119, 617, 954, 1573, 1997
BsmFI GGGAC 2 cut(s) 135, 1786
BsnI GGCC 7 cut(s) 159, 1200, 1438, 1656, 1916, 1935, 2517
BsoBI CYCGRG 1 cut(s) 1386
Bsp1407I TGTACA 1 cut(s) 729
BspACI CCGC 2 cut(s) 1882, 2177
BspANI GGCC 7 cut(s) 159, 1200, 1438, 1656, 1916, 1935, 2517
BspCNI CTCAG 3 cut(s) 1222, 1972, 2305
BspLI GGNNCC 6 cut(s) 151, 350, 1030, 1354, 2358, 2469
BspMAI CTGCAG 2 cut(s) 1591, 2207
BspMI ACCTGC 2 cut(s) 188, 1753
BspOI GCTAGC 1 cut(s) 1961
BspPI GGATC 6 cut(s) 618, 1699, 1896, 2126, 2462, 2475
BspQI GCTCTTC 3 cut(s) 978, 1165, 2018
BspT107I GGYRCC 1 cut(s) 348
BsrDI GCAATG 2 cut(s) 217, 2197
BsrFI RCCGGY 1 cut(s) 2426
BsrGI TGTACA 1 cut(s) 729
BsrI ACTGG 6 cut(s) 350, 1470, 1483, 1574, 1927, 2486
BssAI RCCGGY 1 cut(s) 2426
BssECI CCNNGG 3 cut(s) 261, 1770, 1902
BssNI GRCGYC 1 cut(s) 1450
BssT1I CCWWGG 2 cut(s) 261, 1770
Bst2UI CCWGG 3 cut(s) 786, 1447, 2252
Bst4CI ACNGT 8 cut(s) 26, 792, 806, 1090, 1408, 1717, 1968, 2378
Bst6I CTCTTC 5 cut(s) 908, 978, 1165, 1984, 2018
BstACI GRCGYC 1 cut(s) 1450
BstAPI GCANNNNNTGC 1 cut(s) 549
BstAUI TGTACA 1 cut(s) 729
BstC8I GCNNGC 6 cut(s) 416, 868, 1198, 1331, 1564, 1959
BstDEI CTNAG 6 cut(s) 243, 1230, 1619, 1980, 2292, 2369
BstF5I GGATG 7 cut(s) 291, 865, 1136, 1368, 1372, 1607, 2242
BstHHI GCGC 1 cut(s) 844
BstMAI GTCTC 5 cut(s) 119, 617, 954, 1573, 1997
BstMCI CGRYCG 1 cut(s) 2181
BstMWI GCNNNNNNNGC 7 cut(s) 119, 180, 189, 228, 549, 733, 1993
BstNI CCWGG 3 cut(s) 786, 1447, 2252
BstNSI RCATGY 3 cut(s) 736, 949, 1049
BstSCI CCNGG 5 cut(s) 784, 956, 1445, 1901, 2250
BstSFI CTRYAG 7 cut(s) 424, 802, 1221, 1587, 1695, 2203, 2394
BstX2I RGATCY 3 cut(s) 1691, 1888, 2467
BstYI RGATCY 3 cut(s) 1691, 1888, 2467
BsuRI GGCC 7 cut(s) 159, 1200, 1438, 1656, 1916, 1935, 2517
BtsCI GGATG 7 cut(s) 291, 865, 1136, 1368, 1372, 1607, 2242
BtsI GCAGTG 2 cut(s) 655, 1851
BtsIMutI CAGTG 3 cut(s) 655, 1581, 1851
BveI ACCTGC 2 cut(s) 188, 1753
Cac8I GCNNGC 6 cut(s) 416, 868, 1198, 1331, 1564, 1959
CaiI CAGNNNCTG 1 cut(s) 1229
CfoI GCGC 1 cut(s) 844
Cfr10I RCCGGY 1 cut(s) 2426
Cfr13I GGNCC 6 cut(s) 149, 338, 1028, 1571, 1924, 2429
CseI GACGC 2 cut(s) 770, 1439
Csp6I GTAC 4 cut(s) 349, 730, 1280, 1879
CspAI ACCGGT 1 cut(s) 2426
CviAII CATG 9 cut(s) 353, 409, 733, 935, 946, 1025, 1046, 2039, 2539
CviQI GTAC 4 cut(s) 349, 730, 1280, 1879
DdeI CTNAG 6 cut(s) 243, 1230, 1619, 1980, 2292, 2369
DraI TTTAAA 2 cut(s) 487, 1861
EaeI YGGCCR 5 cut(s) 157, 1198, 1436, 1654, 2515
Eam1104I CTCTTC 5 cut(s) 908, 978, 1165, 1984, 2018
EarI CTCTTC 5 cut(s) 908, 978, 1165, 1984, 2018
Eco130I CCWWGG 2 cut(s) 261, 1770
Eco32I GATATC 1 cut(s) 2226
Eco47I GGWCC 6 cut(s) 149, 338, 1028, 1571, 1924, 2429
Eco57I CTGAAG 5 cut(s) 959, 1086, 1413, 1650, 2496
Eco88I CYCGRG 1 cut(s) 1386
EcoRII CCWGG 3 cut(s) 784, 1445, 2250
EcoRV GATATC 1 cut(s) 2226
EcoT14I CCWWGG 2 cut(s) 261, 1770
EcoT22I ATGCAT 3 cut(s) 67, 738, 1258
ErhI CCWWGG 2 cut(s) 261, 1770
FaeI CATG 9 cut(s) 356, 412, 736, 938, 949, 1028, 1049, 2042, 2542
FalI AAGNNNNNCTT 2 cut(s) 236, 268
FaqI GGGAC 2 cut(s) 135, 1786
FatI CATG 9 cut(s) 352, 408, 732, 934, 945, 1024, 1045, 2038, 2538
FauNDI CATATG 3 cut(s) 145, 738, 2268
FbaI TGATCA 2 cut(s) 385, 2194
FblI GTMKAC 1 cut(s) 743
FokI GGATG 7 cut(s) 298, 872, 1123, 1375, 1379, 1594, 2249
FspBI CTAG 7 cut(s) 1098, 1143, 1283, 1497, 1638, 1644, 1958
GlaI GCGC 1 cut(s) 843
HaeIII GGCC 7 cut(s) 159, 1200, 1438, 1656, 1916, 1935, 2517
HapII CCGG 4 cut(s) 958, 994, 1902, 2427
HgaI GACGC 2 cut(s) 770, 1439
HhaI GCGC 1 cut(s) 844
Hin1I GRCGYC 1 cut(s) 1450
Hin1II CATG 9 cut(s) 356, 412, 736, 938, 949, 1028, 1049, 2042, 2542
Hin6I GCGC 1 cut(s) 842
HinP1I GCGC 1 cut(s) 842
HincII GTYRAC 2 cut(s) 332, 1454
HindII GTYRAC 2 cut(s) 332, 1454
HindIII AAGCTT 1 cut(s) 988
HpaII CCGG 4 cut(s) 958, 994, 1902, 2427
HphI GGTGA 6 cut(s) 250, 641, 1472, 1626, 2396, 2426
Hpy166II GTNNAC 5 cut(s) 332, 744, 1454, 1924, 2156
Hpy188III TCNNGA 9 cut(s) 164, 1084, 1260, 1386, 1554, 1872, 1952, 1973, 2432
Hpy8I GTNNAC 5 cut(s) 332, 744, 1454, 1924, 2156
Hpy99I CGWCG 2 cut(s) 1170, 1398
HpyAV CCTTC 6 cut(s) 350, 555, 1309, 1560, 2347, 2471
HpyCH4III ACNGT 8 cut(s) 26, 792, 806, 1090, 1408, 1717, 1968, 2378
HpyF10VI GCNNNNNNNGC 7 cut(s) 119, 180, 189, 228, 549, 733, 1993
HpyF3I CTNAG 6 cut(s) 243, 1230, 1619, 1980, 2292, 2369
Hsp92I GRCGYC 1 cut(s) 1450
Hsp92II CATG 9 cut(s) 356, 412, 736, 938, 949, 1028, 1049, 2042, 2542
HspAI GCGC 1 cut(s) 842
KpnI GGTACC 1 cut(s) 352
Ksp22I TGATCA 2 cut(s) 385, 2194
LguI GCTCTTC 3 cut(s) 978, 1165, 2018
LmnI GCTCC 4 cut(s) 179, 959, 1675, 2333
MaeI CTAG 7 cut(s) 1098, 1143, 1283, 1497, 1638, 1644, 1958
MaeIII GTNAC 6 cut(s) 41, 256, 806, 1178, 1632, 1938
MfeI CAATTG 1 cut(s) 605
MflI RGATCY 3 cut(s) 1691, 1888, 2467
MlsI TGGCCA 4 cut(s) 159, 1438, 1656, 2517
MluNI TGGCCA 4 cut(s) 159, 1438, 1656, 2517
MlyI GAGTC 4 cut(s) 1175, 1217, 1241, 1694
MmeI TCCRAC 1 cut(s) 1756
Mox20I TGGCCA 4 cut(s) 159, 1438, 1656, 2517
Mph1103I ATGCAT 3 cut(s) 67, 738, 1258
MroXI GAANNNNTTC 2 cut(s) 1125, 1351
MscI TGGCCA 4 cut(s) 159, 1438, 1656, 2517
MseI TTAA 8 cut(s) 5, 444, 486, 672, 1401, 1419, 1536, 1860
MslI CAYNNNNRTG 2 cut(s) 133, 737
Msp20I TGGCCA 4 cut(s) 159, 1438, 1656, 2517
MspA1I CMGCKG 3 cut(s) 502, 2177, 2300
MspI CCGG 4 cut(s) 958, 994, 1902, 2427
MspR9I CCNGG 5 cut(s) 786, 958, 1447, 1903, 2252
MunI CAATTG 1 cut(s) 605
MvaI CCWGG 3 cut(s) 786, 1447, 2252
MwoI GCNNNNNNNGC 7 cut(s) 119, 180, 189, 228, 549, 733, 1993
NciI CCSGG 2 cut(s) 958, 1903
NdeI CATATG 3 cut(s) 145, 738, 2268
NheI GCTAGC 1 cut(s) 1957
NlaIII CATG 9 cut(s) 356, 412, 736, 938, 949, 1028, 1049, 2042, 2542
NlaIV GGNNCC 6 cut(s) 151, 350, 1030, 1354, 2358, 2469
NmuCI GTSAC 4 cut(s) 256, 1178, 1632, 1938
NsiI ATGCAT 3 cut(s) 67, 738, 1258
NspI RCATGY 3 cut(s) 736, 949, 1049
PaeR7I CTCGAG 1 cut(s) 1386
PaqCI CACCTGC 1 cut(s) 188
PciI ACATGT 2 cut(s) 945, 1045
PciSI GCTCTTC 3 cut(s) 978, 1165, 2018
PcsI WCGNNNNNNNCGW 1 cut(s) 958
PdmI GAANNNNTTC 2 cut(s) 1125, 1351
PflMI CCANNNNNTGG 2 cut(s) 713, 2492
PfoI TCCNGGA 1 cut(s) 784
PinAI ACCGGT 1 cut(s) 2426
PleI GAGTC 4 cut(s) 1175, 1216, 1240, 1694
PpsI GAGTC 4 cut(s) 1175, 1216, 1240, 1694
PscI ACATGT 2 cut(s) 945, 1045
PshBI ATTAAT 2 cut(s) 444, 1536
Psp6I CCWGG 3 cut(s) 784, 1445, 2250
PspGI CCWGG 3 cut(s) 784, 1445, 2250
PspN4I GGNNCC 6 cut(s) 151, 350, 1030, 1354, 2358, 2469
PspPI GGNCC 6 cut(s) 149, 338, 1028, 1571, 1924, 2429
PstI CTGCAG 2 cut(s) 1591, 2207
PstNI CAGNNNCTG 1 cut(s) 1229
PsuI RGATCY 3 cut(s) 1691, 1888, 2467
PvuII CAGCTG 2 cut(s) 502, 2300
RsaI GTAC 4 cut(s) 350, 731, 1281, 1880
RsaNI GTAC 4 cut(s) 349, 730, 1280, 1879
RseI CAYNNNNRTG 2 cut(s) 133, 737
SapI GCTCTTC 3 cut(s) 978, 1165, 2018
SaqAI TTAA 8 cut(s) 5, 444, 486, 672, 1401, 1419, 1536, 1860
Sau96I GGNCC 6 cut(s) 149, 338, 1028, 1571, 1924, 2429
SchI GAGTC 4 cut(s) 1175, 1217, 1241, 1694
ScrFI CCNGG 5 cut(s) 786, 958, 1447, 1903, 2252
SfcI CTRYAG 7 cut(s) 424, 802, 1221, 1587, 1695, 2203, 2394
Sfr274I CTCGAG 1 cut(s) 1386
SinI GGWCC 6 cut(s) 149, 338, 1028, 1571, 1924, 2429
SlaI CTCGAG 1 cut(s) 1386
SmiMI CAYNNNNRTG 2 cut(s) 133, 737
SmlI CTYRAG 2 cut(s) 1386, 1952
SmoI CTYRAG 2 cut(s) 1386, 1952
SpeI ACTAGT 1 cut(s) 1643
SsiI CCGC 2 cut(s) 1882, 2177
SspMI CTAG 7 cut(s) 1098, 1143, 1283, 1497, 1638, 1644, 1958
StyD4I CCNGG 5 cut(s) 784, 956, 1445, 1901, 2250
StyI CCWWGG 2 cut(s) 261, 1770
TaaI ACNGT 8 cut(s) 26, 792, 806, 1090, 1408, 1717, 1968, 2378
TaqI TCGA 5 cut(s) 163, 1075, 1168, 1387, 2166
TatI WGTACW 2 cut(s) 729, 1279
Tru1I TTAA 8 cut(s) 5, 444, 486, 672, 1401, 1419, 1536, 1860
Tru9I TTAA 8 cut(s) 5, 444, 486, 672, 1401, 1419, 1536, 1860
TscAI CASTG 3 cut(s) 655, 1581, 1858
TseFI GTSAC 4 cut(s) 256, 1178, 1632, 1938
Tsp45I GTSAC 4 cut(s) 256, 1178, 1632, 1938
TspDTI ATGAA 9 cut(s) 190, 369, 462, 509, 810, 818, 926, 2036, 2253
TspGWI ACGGA 3 cut(s) 185, 1375, 1808
TspRI CASTG 3 cut(s) 655, 1581, 1858
Van91I CCANNNNNTGG 2 cut(s) 713, 2492
VpaK11BI GGWCC 6 cut(s) 149, 338, 1028, 1571, 1924, 2429
VspI ATTAAT 2 cut(s) 444, 1536
XapI RAATTY 5 cut(s) 482, 881, 1832, 1847, 2320
XceI RCATGY 3 cut(s) 736, 949, 1049
XhoI CTCGAG 1 cut(s) 1386
XmiI GTMKAC 1 cut(s) 743
XmnI GAANNNNTTC 2 cut(s) 1125, 1351
XspI CTAG 7 cut(s) 1098, 1143, 1283, 1497, 1638, 1644, 1958
Zsp2I ATGCAT 3 cut(s) 67, 738, 1258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.