Rroxscaffold_6G00421200

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000854
Physical Location & Seq
Reverse (-)
42425674 .. 42429689
4016 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00421200.1

Sequence Viewer

Length: 2091 bp
ATGGTCCCTGTGGCCATCGAGAGGTCTGCTCCACCTGCACTATTCGCCTCCGTTTCATCTGTAGAGATTCCCATTGCTGCCTCTGCAAGAGTGAATCTAAGATCATCTTTGTCACCAAGGTCAGACATCATCACTGCTTACGTATCTGTGCTTGGAGGGAAGGAAGAGACAGGTGATTCAGAGGTAGATGGCAGTGAGAGTGAAAGAGGTGGGTTTAATGGACACCCTATGTGTGAGTTTTGCAAGAATCCATTTTATGGAGATAATGAGCTGTACATGCATATGTCTACCGAGCATTTTACTTGTCATATATGCCAAAGGCAGCGTCCAGGACAGTATGAATACTACAGTAACTATGACAACTTGGAGGCCAGTTTTACATTTATAACTCCTTATGAATACTATAATAACTTGTTGCAAGTACACTTTTATACTCTAGATTTGCTCAGTTGCTCTGACTTCAGTTTATATCTGCAGAGGCATAATGCCAAAGAACATGGAGGGAACATGTCTCGCTCCCGGCGTAATGCTGCTCTTCAGATACCAATAAGCTTCCGGTGTAGGAGAAGTAATGAGGAAGATCATCATGGACCCCATAGTGGAGGACATGTTTCTGGTGTTGATGCTGAAGATAATCGACTTTTCCCGACTGTTCAAGCTAGTGTCGATACAGCCAATGCAGAAAGGTTTCGTAATACATCCTCTAGTGTCCAAGCAGTTTTTGATCGTCGAAGAGCAAGTGACTCTGTGATTATTGCTGGCCGTTTTGAGTCATTAGCTACTACAGAAACTGAGTCATCTGTAAGATGCTCTAATGCTTCAAGAGAAAACTCTCGTAATGTACTAGCAGAAGAATCAGCCTTCCCTCCACTTCCTCTGGCTCAAAGTAGCAGGCGACAGAAGTTTAGAAATGGTTCCGAACGGATGGATGGTAGCACAATGGCATCTCGAGTTCGTCGCCTTAATACAGTAAATGTCCTTAATTCTTCTTCAGCTTGGCCCACAGCAAGGCGTCAACCTAAATCATCTGCCAGTAGTTCTCACCAGTTATCATCATCTAGTTCTTCTGTATTTTCCCAGAGTAATACTGCAACTATTAATAGGACTATGCCTTCTGGATATGCAAGCTCTGGTCCAGTGAGACAAGCTGCAGCTAATGGTTTTGTATCATCCAATTTTCTTAGCACAGGGAAGTCACCTAGCACTAGTAAGGTTGGCCACTCTACTTCAGCTCCAAACCTTGTTGAGAGAGGATCTATAGACTCTGATTTTCCTACTGTATCTGCTACTCGAACTAATAGAGAACCTGCAAATAGTCAGACAATAATACCCAAGGTCGGAGATGTTCAGACTGCCAACAAGTCCCTTGTAGAAAAAATCCGTGATGCTTTAGAATTTGATGAGAGCAAATTCACCGCATTTAAAGAAATATCTGGAAAGTACCGCAAGGATCTAATCAACGCCGGGGAATATCTGGCCTGTGTGGACCAGTTTGGCCTGTCACACTTGGTTCTTGAGCTAGCTCAACTGTGTCCTGATGCTGAGAAGCGAAGAGAGCTTGTTGAGACTTACAATTTCAATATGAAGAGCAGTCGTTCTCATGGAATCAATTTGAGTATTGGTGGTGGCAAGTCAAAGAGCAGTTCCAAGAAAGGCAAGGAAAAATGTGTAGATAATGGGATCAGTAGTTCAAAAGATGCTTTGAAGTTGAATTGTAAACCTCCTGTTGAAGATGCAGCGGTTGTATTGAAGAATGATCATTGCTGCAGCAAAGGAAAGTCAAAGATATCAGTTGAGGATGAACAGATCAACCTGGATTCTGGGAATCATATGCCGATGGGTCAGAATGGTTCTCAGTCAGCTGGTGGCAGCTCAAAGAAAAATTTGGGGAAAGGAGCTAATAAGCAACAAAAGAAGGTTCCCAAGTTTCTTAGAAACCGTCTTGGTGATGATGCTGTAGCACTTGCAGAACTTGGTGATGCTGAAACCGGTCCTGACCTGATTGAAGAAAAAACAGACAGAGACAAGGATCCCCCGAAGGGTTGCCAGTTCGTGGTGTTTGGCAAAATGGAGGTGGCCATAGACTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

696

Amino Acids

75.97

Weight (kDa)

8.39

Isoelectric Point (pI)

54.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAH_ZNF598 PF23202 450 - 525 1.9e-22 ZNF598 PAH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 386
AarI CACCTGC 1 cut(s) 43
Acc36I ACCTGC 2 cut(s) 43, 1315
AccB7I CCANNNNNTGG 2 cut(s) 257, 2053
AccI GTMKAC 1 cut(s) 287
AciI CCGC 3 cut(s) 1416, 1444, 1739
AclWI GGATC 5 cut(s) 1261, 1458, 1688, 2024, 2037
AcoI YGGCCR 4 cut(s) 12, 760, 1216, 2076
AcsI RAATTY 3 cut(s) 1394, 1409, 1882
AcuI CTGAAG 5 cut(s) 445, 521, 648, 975, 1212
AcyI GRCGYC 1 cut(s) 1012
AfaI GTAC 4 cut(s) 275, 423, 843, 1442
AfiI CCNNNNNNNGG 7 cut(s) 21, 257, 599, 1008, 1337, 2039, 2053
AflIII ACRYGT 2 cut(s) 507, 607
AgeI ACCGGT 1 cut(s) 1988
AgsI TTSAA 9 cut(s) 656, 822, 1579, 1692, 1705, 1711, 1730, 1750, 2006
AhlI ACTAGT 1 cut(s) 1205
AjnI CCWGG 2 cut(s) 328, 1812
AloI GAACNNNNNNTCC 2 cut(s) 1672, 1704
Alw26I GTCTC 5 cut(s) 161, 516, 1135, 1559, 2016
AlwI GGATC 5 cut(s) 1261, 1458, 1688, 2024, 2037
AlwNI CAGNNNCTG 1 cut(s) 791
Ama87I CYCGRG 1 cut(s) 948
AoxI GGCC 8 cut(s) 12, 369, 760, 998, 1216, 1476, 1495, 2076
ApeKI GCWGC 9 cut(s) 77, 322, 530, 1148, 1151, 1736, 1764, 1767, 1869
ApoI RAATTY 3 cut(s) 1394, 1409, 1882
ArsI GACNNNNNNTTYG 2 cut(s) 310, 342
AseI ATTAAT 1 cut(s) 1098
AsiGI ACCGGT 1 cut(s) 1988
Asp700I GAANNNNTTC 2 cut(s) 687, 913
AspS9I GGNCC 6 cut(s) 4, 590, 999, 1133, 1486, 1991
AsuC2I CCSGG 2 cut(s) 520, 1465
AsuHPI GGTGA 7 cut(s) 105, 185, 1034, 1188, 1405, 1958, 1988
AsuNHI GCTAGC 1 cut(s) 1519
AvaI CYCGRG 1 cut(s) 948
AvaII GGWCC 5 cut(s) 4, 590, 1133, 1486, 1991
BalI TGGCCA 3 cut(s) 14, 1218, 2078
BamHI GGATCC 1 cut(s) 2029
BbvI GCAGC 9 cut(s) 64, 334, 517, 1135, 1163, 1748, 1751, 1779, 1881
BccI CCATC 5 cut(s) 23, 182, 919, 923, 1831
BceAI ACGGC 1 cut(s) 747
BcgI CGANNNNNNTGC 2 cut(s) 8, 42
BciT130I CCWGG 2 cut(s) 330, 1814
BclI TGATCA 1 cut(s) 1756
BcnI CCSGG 2 cut(s) 520, 1465
BcoDI GTCTC 5 cut(s) 161, 516, 1135, 1559, 2016
BcuI ACTAGT 1 cut(s) 1205
BfaI CTAG 8 cut(s) 437, 660, 705, 845, 1059, 1200, 1206, 1520
BfmI CTRYAG 8 cut(s) 60, 346, 473, 783, 1149, 1257, 1765, 1956
BfuAI ACCTGC 2 cut(s) 43, 1315
BisI GCNGC 9 cut(s) 78, 323, 531, 1149, 1152, 1737, 1765, 1768, 1870
BlsI GCNGC 9 cut(s) 79, 324, 532, 1150, 1153, 1738, 1766, 1769, 1871
Bme1390I CCNGG 4 cut(s) 330, 520, 1465, 1814
Bme18I GGWCC 5 cut(s) 4, 590, 1133, 1486, 1991
BmeT110I CYCGRG 1 cut(s) 948
BmgT120I GGNCC 6 cut(s) 4, 590, 999, 1133, 1486, 1991
BmiI GGNNCC 5 cut(s) 6, 592, 916, 1920, 2031
BmrFI CCNGG 4 cut(s) 330, 520, 1465, 1814
BmsI GCATC 9 cut(s) 613, 797, 953, 1375, 1528, 1687, 1723, 1942, 1969
BmtI GCTAGC 1 cut(s) 1523
BplI GAGNNNNNCTC 2 cut(s) 13, 45
BpuEI CTTGAG 1 cut(s) 1535
BpuMI CCSGG 2 cut(s) 520, 1465
BsaAI YACGTR 1 cut(s) 142
BsaHI GRCGYC 1 cut(s) 1012
BsaJI CCNNGG 3 cut(s) 116, 1332, 1464
BsaWI WCCGGW 2 cut(s) 555, 1988
BsaXI ACNNNNNCTCC 4 cut(s) 594, 624, 1216, 1246
Bsc4I CCNNNNNNNGG 7 cut(s) 21, 257, 599, 1008, 1337, 2039, 2053
Bse118I RCCGGY 1 cut(s) 1988
Bse1I ACTGG 6 cut(s) 372, 1032, 1045, 1136, 1489, 2047
Bse3DI GCAATG 2 cut(s) 72, 1759
BseBI CCWGG 2 cut(s) 330, 1814
BseDI CCNNGG 3 cut(s) 116, 1332, 1464
BseGI GGATG 5 cut(s) 698, 930, 934, 1169, 1804
BseLI CCNNNNNNNGG 7 cut(s) 21, 257, 599, 1008, 1337, 2039, 2053
BseMI GCAATG 2 cut(s) 72, 1759
BseMII CTCAG 4 cut(s) 460, 783, 1533, 1868
BseNI ACTGG 6 cut(s) 372, 1032, 1045, 1136, 1489, 2047
BseXI GCAGC 9 cut(s) 64, 334, 517, 1135, 1163, 1748, 1751, 1779, 1881
BsgI GTGCAG 1 cut(s) 21
BshFI GGCC 8 cut(s) 14, 371, 762, 1000, 1218, 1478, 1497, 2078
BshTI ACCGGT 1 cut(s) 1988
BsiHKCI CYCGRG 1 cut(s) 948
BsiSI CCGG 4 cut(s) 520, 556, 1464, 1989
BslFI GGGAC 1 cut(s) 1348
BslI CCNNNNNNNGG 7 cut(s) 21, 257, 599, 1008, 1337, 2039, 2053
BsmAI GTCTC 5 cut(s) 161, 516, 1135, 1559, 2016
BsmFI GGGAC 1 cut(s) 1348
BsnI GGCC 8 cut(s) 14, 371, 762, 1000, 1218, 1478, 1497, 2078
BsoBI CYCGRG 1 cut(s) 948
Bsp1407I TGTACA 1 cut(s) 273
Bsp143I GATC 9 cut(s) 101, 580, 724, 1253, 1450, 1680, 1756, 1806, 2029
BspACI CCGC 3 cut(s) 1416, 1444, 1739
BspANI GGCC 8 cut(s) 14, 371, 762, 1000, 1218, 1478, 1497, 2078
BspCNI CTCAG 4 cut(s) 459, 784, 1534, 1867
BspLI GGNNCC 5 cut(s) 6, 592, 916, 1920, 2031
BspMAI CTGCAG 3 cut(s) 477, 1153, 1769
BspMI ACCTGC 2 cut(s) 43, 1315
BspOI GCTAGC 1 cut(s) 1523
BspPI GGATC 5 cut(s) 1261, 1458, 1688, 2024, 2037
BspQI GCTCTTC 3 cut(s) 540, 727, 1580
BsrDI GCAATG 2 cut(s) 72, 1759
BsrFI RCCGGY 1 cut(s) 1988
BsrGI TGTACA 1 cut(s) 273
BsrI ACTGG 6 cut(s) 372, 1032, 1045, 1136, 1489, 2047
BssAI RCCGGY 1 cut(s) 1988
BssECI CCNNGG 3 cut(s) 116, 1332, 1464
BssMI GATC 9 cut(s) 101, 580, 724, 1253, 1450, 1680, 1756, 1806, 2029
BssNI GRCGYC 1 cut(s) 1012
BssT1I CCWWGG 2 cut(s) 116, 1332
Bst2UI CCWGG 2 cut(s) 330, 1814
Bst4CI ACNGT 7 cut(s) 336, 350, 652, 970, 1279, 1530, 1940
Bst6I CTCTTC 5 cut(s) 159, 540, 727, 1546, 1580
BstACI GRCGYC 1 cut(s) 1012
BstAUI TGTACA 1 cut(s) 273
BstBAI YACGTR 1 cut(s) 142
BstC8I GCNNGC 4 cut(s) 760, 893, 1126, 1521
BstDEI CTNAG 7 cut(s) 98, 446, 792, 1181, 1542, 1854, 1931
BstF5I GGATG 5 cut(s) 698, 930, 934, 1169, 1804
BstKTI GATC 9 cut(s) 104, 583, 727, 1256, 1453, 1683, 1759, 1809, 2032
BstMAI GTCTC 5 cut(s) 161, 516, 1135, 1559, 2016
BstMBI GATC 9 cut(s) 101, 580, 724, 1253, 1450, 1680, 1756, 1806, 2029
BstMWI GCNNNNNNNGC 5 cut(s) 35, 44, 83, 277, 1555
BstNI CCWGG 2 cut(s) 330, 1814
BstNSI RCATGY 3 cut(s) 280, 511, 611
BstSCI CCNGG 4 cut(s) 328, 518, 1463, 1812
BstSFI CTRYAG 8 cut(s) 60, 346, 473, 783, 1149, 1257, 1765, 1956
BstSNI TACGTA 1 cut(s) 142
BstV1I GCAGC 9 cut(s) 64, 334, 517, 1135, 1163, 1748, 1751, 1779, 1881
BstX2I RGATCY 3 cut(s) 1253, 1450, 2029
BstYI RGATCY 3 cut(s) 1253, 1450, 2029
BsuRI GGCC 8 cut(s) 14, 371, 762, 1000, 1218, 1478, 1497, 2078
BtsCI GGATG 5 cut(s) 698, 930, 934, 1169, 1804
BtsI GCAGTG 2 cut(s) 132, 199
BtsIMutI CAGTG 3 cut(s) 132, 199, 1143
BveI ACCTGC 2 cut(s) 43, 1315
Cac8I GCNNGC 4 cut(s) 760, 893, 1126, 1521
CaiI CAGNNNCTG 1 cut(s) 791
Cfr10I RCCGGY 1 cut(s) 1988
Cfr13I GGNCC 6 cut(s) 4, 590, 999, 1133, 1486, 1991
CseI GACGC 2 cut(s) 314, 1001
Csp6I GTAC 4 cut(s) 274, 422, 842, 1441
CspAI ACCGGT 1 cut(s) 1988
CviAII CATG 6 cut(s) 277, 497, 508, 587, 608, 1601
CviQI GTAC 4 cut(s) 274, 422, 842, 1441
DdeI CTNAG 7 cut(s) 98, 446, 792, 1181, 1542, 1854, 1931
DpnI GATC 9 cut(s) 103, 582, 726, 1255, 1452, 1682, 1758, 1808, 2031
DpnII GATC 9 cut(s) 101, 580, 724, 1253, 1450, 1680, 1756, 1806, 2029
DraI TTTAAA 1 cut(s) 1423
EaeI YGGCCR 4 cut(s) 12, 760, 1216, 2076
Eam1104I CTCTTC 5 cut(s) 159, 540, 727, 1546, 1580
EarI CTCTTC 5 cut(s) 159, 540, 727, 1546, 1580
Eco105I TACGTA 1 cut(s) 142
Eco130I CCWWGG 2 cut(s) 116, 1332
Eco32I GATATC 1 cut(s) 1788
Eco47I GGWCC 5 cut(s) 4, 590, 1133, 1486, 1991
Eco57I CTGAAG 5 cut(s) 445, 521, 648, 975, 1212
Eco88I CYCGRG 1 cut(s) 948
EcoRII CCWGG 2 cut(s) 328, 1812
EcoRV GATATC 1 cut(s) 1788
EcoT14I CCWWGG 2 cut(s) 116, 1332
EcoT22I ATGCAT 1 cut(s) 282
ErhI CCWWGG 2 cut(s) 116, 1332
FaeI CATG 6 cut(s) 280, 500, 511, 590, 611, 1604
FalI AAGNNNNNCTT 2 cut(s) 91, 123
FaqI GGGAC 1 cut(s) 1348
FatI CATG 6 cut(s) 276, 496, 507, 586, 607, 1600
FauNDI CATATG 2 cut(s) 282, 1830
FbaI TGATCA 1 cut(s) 1756
FblI GTMKAC 1 cut(s) 287
Fnu4HI GCNGC 9 cut(s) 78, 323, 531, 1149, 1152, 1737, 1765, 1768, 1870
FokI GGATG 5 cut(s) 685, 937, 941, 1156, 1811
Fsp4HI GCNGC 9 cut(s) 78, 323, 531, 1149, 1152, 1737, 1765, 1768, 1870
FspBI CTAG 8 cut(s) 437, 660, 705, 845, 1059, 1200, 1206, 1520
GluI GCNGC 9 cut(s) 78, 323, 531, 1149, 1152, 1737, 1765, 1768, 1870
HaeIII GGCC 8 cut(s) 14, 371, 762, 1000, 1218, 1478, 1497, 2078
HapII CCGG 4 cut(s) 520, 556, 1464, 1989
HgaI GACGC 2 cut(s) 314, 1001
Hin1I GRCGYC 1 cut(s) 1012
Hin1II CATG 6 cut(s) 280, 500, 511, 590, 611, 1604
HincII GTYRAC 1 cut(s) 1016
HindII GTYRAC 1 cut(s) 1016
HindIII AAGCTT 1 cut(s) 550
HpaII CCGG 4 cut(s) 520, 556, 1464, 1989
HphI GGTGA 7 cut(s) 105, 185, 1034, 1188, 1405, 1958, 1988
Hpy166II GTNNAC 5 cut(s) 288, 424, 1016, 1486, 1718
Hpy8I GTNNAC 5 cut(s) 288, 424, 1016, 1486, 1718
Hpy99I CGWCG 2 cut(s) 732, 960
HpyAV CCTTC 5 cut(s) 154, 871, 1122, 1909, 2032
HpyCH4III ACNGT 7 cut(s) 336, 350, 652, 970, 1279, 1530, 1940
HpyCH4IV ACGT 1 cut(s) 141
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 44, 83, 277, 1555
HpyF3I CTNAG 7 cut(s) 98, 446, 792, 1181, 1542, 1854, 1931
HpySE526I ACGT 1 cut(s) 141
Hsp92I GRCGYC 1 cut(s) 1012
Hsp92II CATG 6 cut(s) 280, 500, 511, 590, 611, 1604
Ksp22I TGATCA 1 cut(s) 1756
Kzo9I GATC 9 cut(s) 101, 580, 724, 1253, 1450, 1680, 1756, 1806, 2029
LguI GCTCTTC 3 cut(s) 540, 727, 1580
LmnI GCTCC 4 cut(s) 34, 521, 1237, 1895
Lsp1109I GCAGC 9 cut(s) 64, 334, 517, 1135, 1163, 1748, 1751, 1779, 1881
LweI GCATC 9 cut(s) 613, 797, 953, 1375, 1528, 1687, 1723, 1942, 1969
MaeI CTAG 8 cut(s) 437, 660, 705, 845, 1059, 1200, 1206, 1520
MaeII ACGT 1 cut(s) 141
MaeIII GTNAC 5 cut(s) 111, 350, 740, 1194, 1500
MalI GATC 9 cut(s) 103, 582, 726, 1255, 1452, 1682, 1758, 1808, 2031
MboI GATC 9 cut(s) 101, 580, 724, 1253, 1450, 1680, 1756, 1806, 2029
MflI RGATCY 3 cut(s) 1253, 1450, 2029
MlsI TGGCCA 3 cut(s) 14, 1218, 2078
MluCI AATT 8 cut(s) 982, 1174, 1394, 1409, 1573, 1609, 1711, 1882
MluNI TGGCCA 3 cut(s) 14, 1218, 2078
MlyI GAGTC 4 cut(s) 737, 779, 803, 1256
MmeI TCCRAC 1 cut(s) 1318
Mox20I TGGCCA 3 cut(s) 14, 1218, 2078
Mph1103I ATGCAT 1 cut(s) 282
MroXI GAANNNNTTC 2 cut(s) 687, 913
MscI TGGCCA 3 cut(s) 14, 1218, 2078
MseI TTAA 5 cut(s) 216, 963, 981, 1098, 1422
MslI CAYNNNNRTG 1 cut(s) 281
Msp20I TGGCCA 3 cut(s) 14, 1218, 2078
MspA1I CMGCKG 2 cut(s) 1739, 1862
MspI CCGG 4 cut(s) 520, 556, 1464, 1989
MspR9I CCNGG 4 cut(s) 330, 520, 1465, 1814
MvaI CCWGG 2 cut(s) 330, 1814
MwoI GCNNNNNNNGC 5 cut(s) 35, 44, 83, 277, 1555
NciI CCSGG 2 cut(s) 520, 1465
NdeI CATATG 2 cut(s) 282, 1830
NdeII GATC 9 cut(s) 101, 580, 724, 1253, 1450, 1680, 1756, 1806, 2029
NheI GCTAGC 1 cut(s) 1519
NlaIII CATG 6 cut(s) 280, 500, 511, 590, 611, 1604
NlaIV GGNNCC 5 cut(s) 6, 592, 916, 1920, 2031
NmuCI GTSAC 4 cut(s) 111, 740, 1194, 1500
NsiI ATGCAT 1 cut(s) 282
NspI RCATGY 3 cut(s) 280, 511, 611
PaeR7I CTCGAG 1 cut(s) 948
PaqCI CACCTGC 1 cut(s) 43
PciI ACATGT 2 cut(s) 507, 607
PciSI GCTCTTC 3 cut(s) 540, 727, 1580
PcsI WCGNNNNNNNCGW 1 cut(s) 520
PdmI GAANNNNTTC 2 cut(s) 687, 913
PfeI GAWTC 8 cut(s) 67, 94, 176, 247, 854, 1605, 1817, 1825
PflMI CCANNNNNTGG 2 cut(s) 257, 2053
PfoI TCCNGGA 1 cut(s) 328
PinAI ACCGGT 1 cut(s) 1988
PkrI GCNGC 9 cut(s) 79, 324, 532, 1150, 1153, 1738, 1766, 1769, 1871
PleI GAGTC 4 cut(s) 737, 778, 802, 1256
PpsI GAGTC 4 cut(s) 737, 778, 802, 1256
Ppu21I YACGTR 1 cut(s) 142
PscI ACATGT 2 cut(s) 507, 607
PshBI ATTAAT 1 cut(s) 1098
PsiI TTATAA 1 cut(s) 386
Psp6I CCWGG 2 cut(s) 328, 1812
PspGI CCWGG 2 cut(s) 328, 1812
PspN4I GGNNCC 5 cut(s) 6, 592, 916, 1920, 2031
PspPI GGNCC 6 cut(s) 4, 590, 999, 1133, 1486, 1991
PstI CTGCAG 3 cut(s) 477, 1153, 1769
PstNI CAGNNNCTG 1 cut(s) 791
PsuI RGATCY 3 cut(s) 1253, 1450, 2029
PvuII CAGCTG 1 cut(s) 1862
RsaI GTAC 4 cut(s) 275, 423, 843, 1442
RsaNI GTAC 4 cut(s) 274, 422, 842, 1441
RseI CAYNNNNRTG 1 cut(s) 281
SapI GCTCTTC 3 cut(s) 540, 727, 1580
SaqAI TTAA 5 cut(s) 216, 963, 981, 1098, 1422
SatI GCNGC 9 cut(s) 78, 323, 531, 1149, 1152, 1737, 1765, 1768, 1870
Sau3AI GATC 9 cut(s) 101, 580, 724, 1253, 1450, 1680, 1756, 1806, 2029
Sau96I GGNCC 6 cut(s) 4, 590, 999, 1133, 1486, 1991
SchI GAGTC 4 cut(s) 737, 779, 803, 1256
ScrFI CCNGG 4 cut(s) 330, 520, 1465, 1814
SfaNI GCATC 9 cut(s) 613, 797, 953, 1375, 1528, 1687, 1723, 1942, 1969
SfcI CTRYAG 8 cut(s) 60, 346, 473, 783, 1149, 1257, 1765, 1956
Sfr274I CTCGAG 1 cut(s) 948
SinI GGWCC 5 cut(s) 4, 590, 1133, 1486, 1991
SlaI CTCGAG 1 cut(s) 948
SmiMI CAYNNNNRTG 1 cut(s) 281
SmlI CTYRAG 2 cut(s) 948, 1514
SmoI CTYRAG 2 cut(s) 948, 1514
SnaBI TACGTA 1 cut(s) 142
SpeI ACTAGT 1 cut(s) 1205
Sse9I AATT 8 cut(s) 982, 1174, 1394, 1409, 1573, 1609, 1711, 1882
SsiI CCGC 3 cut(s) 1416, 1444, 1739
SspMI CTAG 8 cut(s) 437, 660, 705, 845, 1059, 1200, 1206, 1520
StyD4I CCNGG 4 cut(s) 328, 518, 1463, 1812
StyI CCWWGG 2 cut(s) 116, 1332
TaaI ACNGT 7 cut(s) 336, 350, 652, 970, 1279, 1530, 1940
TaiI ACGT 1 cut(s) 144
TaqI TCGA 6 cut(s) 18, 637, 666, 730, 949, 1291
TasI AATT 8 cut(s) 982, 1174, 1394, 1409, 1573, 1609, 1711, 1882
TatI WGTACW 3 cut(s) 273, 421, 841
TfiI GAWTC 8 cut(s) 67, 94, 176, 247, 854, 1605, 1817, 1825
Tru1I TTAA 5 cut(s) 216, 963, 981, 1098, 1422
Tru9I TTAA 5 cut(s) 216, 963, 981, 1098, 1422
TscAI CASTG 3 cut(s) 139, 199, 1143
TseFI GTSAC 4 cut(s) 111, 740, 1194, 1500
TseI GCWGC 9 cut(s) 77, 322, 530, 1148, 1151, 1736, 1764, 1767, 1869
Tsp45I GTSAC 4 cut(s) 111, 740, 1194, 1500
TspDTI ATGAA 5 cut(s) 45, 354, 411, 1598, 1815
TspGWI ACGGA 3 cut(s) 40, 937, 1370
TspRI CASTG 3 cut(s) 139, 199, 1143
Van91I CCANNNNNTGG 2 cut(s) 257, 2053
VpaK11BI GGWCC 5 cut(s) 4, 590, 1133, 1486, 1991
VspI ATTAAT 1 cut(s) 1098
XapI RAATTY 3 cut(s) 1394, 1409, 1882
XbaI TCTAGA 1 cut(s) 436
XceI RCATGY 3 cut(s) 280, 511, 611
XhoI CTCGAG 1 cut(s) 948
XmiI GTMKAC 1 cut(s) 287
XmnI GAANNNNTTC 2 cut(s) 687, 913
XspI CTAG 8 cut(s) 437, 660, 705, 845, 1059, 1200, 1206, 1520
Zsp2I ATGCAT 1 cut(s) 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.