Rw0G000180

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00005
OG0000854
Physical Location & Seq
Forward (+)
55874 .. 58105
2232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G000180.1

Sequence Viewer

Length: 2199 bp
ATGGACGATTGCTGTGCGGTGTGTGCCGACACCCTGGAATGGGTTGCCTATGGGGCTTGTGGCCATAAGGAGGTCTGCTCCACCTGCGTGGCTCGCCTCCGTTTCATCTGCGAGGATCGCCGTTGCTGCATCTGCAAGACCGAGTCCAACGTCGTTTTTGTCACCAAGGCTCTAGGAGACTATACCAAGATGGTTAGAGACTTGCCATCTAAAGCAAGGGAGGGTCGCTGTGGATCATATTGGTACCATGAGGACACACAAGCATTTTTCGACGATGCAGATCACTACAAGAAGATCAAGTCAGTGTGCAATCTTTCATGCAGTGAATGTGACAAGATGGAGGAGAAATCAACGATTAGGTTTCGGAACATTGAACAGCTCAAGTTACACTTGTTCCACCAGCATAGGTTGTTTATGTGTCCTCTATGTTTGGAAGGGAGGAAGGTGTTCGTATGTGAACAAAAGCTTTATACTAAAGCCCAGTTGAAACGGCATACAAGTACAGGGGACTCTGTAGTTGATGGAAGTGAAAGCGAAAGAGGTGGCTTCAAGGGACATCCTATGTGTAAGTTTTGCAAAATTGGATTCTACGGCGAGAATGAACTGTATGCTCACATGACTACTGGCCACTATAAGTGTCATTTATGTTGCAATTCTGGAGAACAGTATGAATATTATAACAACTATCATGACCTCGAGTTGCACTTCAGCCGAGGCCATTTTCTATGTGAAGATGAGTCCTGCCTTGAGAAAAAGTTTGTGGTTACTATGGAACATGGGGGGCGTATATCTCGCTCCAAGCGTAATGCTGCTCTCCAATTACCAACTAGCTTCCGATATGGACCAAGTAATGACCAAGATAGTAGACGTGGAAGAAGAGGTCTGCCATTTCGTGGCGATTCTTCTAATGATCAAGCAAGCAGTTTGGAGACACCTAATGCTGATGATAGAACATTGCATGATCCTTCATCATCCATTAGGCAAGCTGGTAGTTCGGAATTACTTGAAGATACAAGTGACATTGATCCAATCATTAAGCCATTTGAGTCCTTAAGTAGACCTTCAAGTGATACAGAAGCATCTTCAAGGTACCTGCGAGTAGCCTTGGGGAAAAACAGTGGGAAAGCGAAAGCGCAATTGGAGGACTCTTCCTTATTTCCTCCCCTTGCACCTGGCAGCAGCAGCAGTCAACCGACTCCCAAACCTGAATCTGATCGTGGTTTGCCTAACAACAATACCATGGCAGCACATCTCCGCAGGCAAAACAACCGGAAGATGGCTGTTGAGTGTCCTGATATTAGGCCTGCTGTTATTAGTTCTAGTGAGGCTTGGCCAGCAGCGGGGCGTGTAGCACCACCTACTAGTTCATCTCAGACGCCGTGGCCTAAAACTAATGTTCCAGGGATTGTCTCAGCAGTTACTAAGCCTGCTGTTAGTTCTAGTCAGGCTTGGCCAGCAGCTGGGCGTGTAGCTCCACCTACTAATTCATCTCAGATGGCATGGCCTAAAGCAAATGTGAGTGCAGCACCACCTACTAGTTCATCTCAGAAGCTGTTTTCTAAAACTAATAGTCAGAACAAGGCGTGGCCGAAGGTTTCAGGTTGTGGTCAGAACAAGACGGCCTTTGGTAAGGGAGCAGGACATTCCAGCTATGCAAGCTCCACTCTGCAGGCTCAAGTTGAGAACCGAGAGACATCAACAGAAGTGCACAAGTGCGTGAGTTTGGATTCCAGCTTGGATTTCCCTCCAGTTTCTGCAGCACAAGTAGTGCAAAAGTTGCCCCAACAAACTAGTGAGCCTTTATTGAAAGTGGGGGATTTTCAAGCTGCTAATAAGGCCTTGGTGGAAAATATTCGCGCTGCTGTTGACTTCAATGAAGACAAATACACTGCGTTTAAGGACATATCTGTACAGTATAGTCAGGGATTAGTGGACATAAACGTGTATTTTAATTTTGTGAGGCAGTTTGGGTTGTTACATCTTGTCCTTGACTTGGCTAGACTGTGCCCCAATGCTGAGAAGCAGCAAGAGCTAATTGATGCCTACGATAACAGTATGAGAAGCAATGGTGCAGAAGAGGATGATGGATGGTCTCAGGTCAAGGTCCGATTGAAAGATTTGAAGAAAGGTAAAGGGAAGAGTTCTAACAATGGCTCTACTGCAGCACCAGTTTTGAATCTCAGGTCAAGGTCCGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

732

Amino Acids

80.94

Weight (kDa)

8.38

Isoelectric Point (pI)

49.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RING_ZNF598 PF25447 2 - 61 2.4e-07 ZNF598 RING finger domain
zf-C2H2_13 PF23230 210 - 255 1e-10 C2H2-type zinc finger
PAH_ZNF598 PF23202 608 - 683 4.3e-18 ZNF598 PAH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 678
AarI CACCTGC 1 cut(s) 92
Acc36I ACCTGC 2 cut(s) 92, 1101
Acc65I GGTACC 2 cut(s) 243, 1089
AccB1I GGYRCC 2 cut(s) 243, 1089
AccB7I CCANNNNNTGG 2 cut(s) 893, 1460
AccI GTMKAC 2 cut(s) 865, 1057
AccII CGCG 1 cut(s) 1857
AciI CCGC 3 cut(s) 17, 1255, 1340
AclWI GGATC 4 cut(s) 123, 241, 956, 1019
AcoI YGGCCR 5 cut(s) 61, 625, 1331, 1451, 1586
AcuI CTGAAG 1 cut(s) 691
AcyI GRCGYC 1 cut(s) 1376
AfaI GTAC 4 cut(s) 245, 502, 1091, 1911
AfiI CCNNNNNNNGG 8 cut(s) 39, 40, 70, 893, 1276, 1340, 1460, 1993
AflII CTTAAG 1 cut(s) 1051
AflIII ACRYGT 1 cut(s) 1941
AhlI ACTAGT 3 cut(s) 1361, 1535, 1790
AjiI CACGTC 1 cut(s) 869
AjnI CCWGG 3 cut(s) 33, 1171, 1399
AjuI GAANNNNNNNTTGG 2 cut(s) 1121, 1153
AleI CACNNNNGTG 1 cut(s) 86
Alw21I GWGCWC 1 cut(s) 1710
Alw26I GTCTC 6 cut(s) 171, 192, 923, 1414, 1685, 2097
Alw44I GTGCAC 1 cut(s) 1706
AlwI GGATC 4 cut(s) 123, 241, 956, 1019
AlwNI CAGNNNCTG 3 cut(s) 1460, 1552, 1754
Ama87I CYCGRG 1 cut(s) 695
ApaLI GTGCAC 1 cut(s) 1706
Asp700I GAANNNNTTC 2 cut(s) 446, 1851
Asp718I GGTACC 2 cut(s) 243, 1089
AspLEI GCGC 2 cut(s) 1135, 1859
AspS9I GGNCC 3 cut(s) 842, 2104, 2190
AsuHPI GGTGA 1 cut(s) 154
AvaI CYCGRG 1 cut(s) 695
AvaII GGWCC 3 cut(s) 842, 2104, 2190
BaeGI GKGCMC 2 cut(s) 1710, 2009
BalI TGGCCA 4 cut(s) 63, 627, 1333, 1453
BanI GGYRCC 2 cut(s) 243, 1089
BbsI GAAGAC 1 cut(s) 1884
Bbv12I GWGCWC 1 cut(s) 1710
BccI CCATC 8 cut(s) 184, 214, 331, 515, 1270, 1489, 2078, 2082
BceAI ACGGC 5 cut(s) 105, 506, 607, 1363, 1635
BcgI CGANNNNNNTGC 1 cut(s) 30
BciT130I CCWGG 3 cut(s) 35, 1173, 1401
BclI TGATCA 1 cut(s) 910
BcoDI GTCTC 6 cut(s) 171, 192, 923, 1414, 1685, 2097
BcuI ACTAGT 3 cut(s) 1361, 1535, 1790
BfaI CTAG 8 cut(s) 173, 828, 1320, 1362, 1440, 1536, 1791, 1998
BfmI CTRYAG 4 cut(s) 513, 1667, 1755, 2160
BfrI CTTAAG 1 cut(s) 1051
BfuAI ACCTGC 2 cut(s) 92, 1101
BglI GCCNNNNNGGC 1 cut(s) 53
Bme1390I CCNGG 3 cut(s) 35, 1173, 1401
Bme18I GGWCC 3 cut(s) 842, 2104, 2190
BmeT110I CYCGRG 1 cut(s) 695
BmgBI CACGTC 1 cut(s) 869
BmgT120I GGNCC 3 cut(s) 842, 2104, 2190
BmiI GGNNCC 2 cut(s) 245, 1091
BmrFI CCNGG 3 cut(s) 35, 1173, 1401
BmrI ACTGGG 1 cut(s) 475
BmsI GCATC 4 cut(s) 138, 265, 1088, 2029
BmuI ACTGGG 1 cut(s) 475
BpiI GAAGAC 1 cut(s) 1884
BplI GAGNNNNNCTC 2 cut(s) 62, 94
BpmI CTGGAG 2 cut(s) 678, 1731
BpuEI CTTGAG 3 cut(s) 365, 767, 1659
BsaBI GATNNNNATC 1 cut(s) 279
BsaHI GRCGYC 1 cut(s) 1376
BsaI GGTCTC 1 cut(s) 2097
BsaJI CCNNGG 8 cut(s) 33, 165, 712, 1104, 1239, 1379, 1400, 1839
BsaWI WCCGGW 1 cut(s) 1269
Bsc4I CCNNNNNNNGG 8 cut(s) 39, 40, 70, 893, 1276, 1340, 1460, 1993
Bse1I ACTGG 4 cut(s) 481, 628, 1748, 2168
Bse3DI GCAATG 2 cut(s) 953, 2071
Bse8I GATNNNNATC 1 cut(s) 279
BseBI CCWGG 3 cut(s) 35, 1173, 1401
BseDI CCNNGG 8 cut(s) 33, 165, 712, 1104, 1239, 1379, 1400, 1839
BseGI GGATG 4 cut(s) 556, 971, 2086, 2093
BseJI GATNNNNATC 1 cut(s) 279
BseLI CCNNNNNNNGG 8 cut(s) 39, 40, 70, 893, 1276, 1340, 1460, 1993
BseMI GCAATG 2 cut(s) 953, 2071
BseMII CTCAG 7 cut(s) 1385, 1425, 1505, 1559, 2007, 2108, 2194
BseNI ACTGG 4 cut(s) 481, 628, 1748, 2168
BseRI GAGGAG 1 cut(s) 356
BseSI GKGCMC 2 cut(s) 1710, 2009
BseYI CCCAGC 1 cut(s) 1460
BsgI GTGCAG 2 cut(s) 1542, 2091
Bsh1236I CGCG 1 cut(s) 1857
BshNI GGYRCC 2 cut(s) 243, 1089
BsiHKAI GWGCWC 1 cut(s) 1710
BsiHKCI CYCGRG 1 cut(s) 695
BsiSI CCGG 1 cut(s) 1270
BslFI GGGAC 2 cut(s) 521, 567
BslI CCNNNNNNNGG 8 cut(s) 39, 40, 70, 893, 1276, 1340, 1460, 1993
BsmAI GTCTC 6 cut(s) 171, 192, 923, 1414, 1685, 2097
BsmFI GGGAC 2 cut(s) 521, 567
Bso31I GGTCTC 1 cut(s) 2097
BsoBI CYCGRG 1 cut(s) 695
Bsp1286I GDGCHC 2 cut(s) 1710, 2009
Bsp1407I TGTACA 1 cut(s) 1909
Bsp143I GATC 8 cut(s) 115, 233, 280, 294, 910, 961, 1024, 1213
Bsp19I CCATGG 1 cut(s) 1239
BspACI CCGC 3 cut(s) 17, 1255, 1340
BspCNI CTCAG 7 cut(s) 1384, 1424, 1504, 1558, 2008, 2107, 2193
BspFNI CGCG 1 cut(s) 1857
BspHI TCATGA 1 cut(s) 688
BspLI GGNNCC 2 cut(s) 245, 1091
BspMAI CTGCAG 3 cut(s) 1671, 1759, 2164
BspMI ACCTGC 2 cut(s) 92, 1101
BspPI GGATC 4 cut(s) 123, 241, 956, 1019
BspT107I GGYRCC 2 cut(s) 243, 1089
BspTI CTTAAG 1 cut(s) 1051
BspTNI GGTCTC 1 cut(s) 2097
BsrDI GCAATG 2 cut(s) 953, 2071
BsrGI TGTACA 1 cut(s) 1909
BsrI ACTGG 4 cut(s) 481, 628, 1748, 2168
BssECI CCNNGG 8 cut(s) 33, 165, 712, 1104, 1239, 1379, 1400, 1839
BssMI GATC 8 cut(s) 115, 233, 280, 294, 910, 961, 1024, 1213
BssNI GRCGYC 1 cut(s) 1376
BssT1I CCWWGG 4 cut(s) 165, 1104, 1239, 1839
Bst2UI CCWGG 3 cut(s) 35, 1173, 1401
Bst4CI ACNGT 6 cut(s) 606, 666, 1118, 1914, 2004, 2054
Bst6I CTCTTC 4 cut(s) 871, 1153, 2070, 2132
BstACI GRCGYC 1 cut(s) 1376
BstAFI CTTAAG 1 cut(s) 1051
BstAPI GCANNNNNTGC 1 cut(s) 1777
BstAUI TGTACA 1 cut(s) 1909
BstDEI CTNAG 8 cut(s) 1371, 1411, 1422, 1491, 1545, 2016, 2094, 2180
BstDSI CCRYGG 2 cut(s) 1239, 1379
BstF5I GGATG 4 cut(s) 556, 971, 2086, 2093
BstFNI CGCG 1 cut(s) 1857
BstHHI GCGC 2 cut(s) 1135, 1859
BstKTI GATC 8 cut(s) 118, 236, 283, 297, 913, 964, 1027, 1216
BstMAI GTCTC 6 cut(s) 171, 192, 923, 1414, 1685, 2097
BstMBI GATC 8 cut(s) 115, 233, 280, 294, 910, 961, 1024, 1213
BstNI CCWGG 3 cut(s) 35, 1173, 1401
BstSCI CCNGG 3 cut(s) 33, 1171, 1399
BstSFI CTRYAG 4 cut(s) 513, 1667, 1755, 2160
BstSLI GKGCMC 2 cut(s) 1710, 2009
BstUI CGCG 1 cut(s) 1857
BstV2I GAAGAC 1 cut(s) 1884
BstXI CCANNNNNNTGG 1 cut(s) 88
BtgI CCRYGG 2 cut(s) 1239, 1379
BtrI CACGTC 1 cut(s) 869
BtsCI GGATG 4 cut(s) 556, 971, 2086, 2093
BtsI GCAGTG 2 cut(s) 328, 1887
BtsIMutI CAGTG 4 cut(s) 309, 328, 1123, 1887
BveI ACCTGC 2 cut(s) 92, 1101
CaiI CAGNNNCTG 3 cut(s) 1460, 1552, 1754
CciI TCATGA 1 cut(s) 688
CfoI GCGC 2 cut(s) 1135, 1859
Cfr13I GGNCC 3 cut(s) 842, 2104, 2190
CseI GACGC 1 cut(s) 1384
Csp6I GTAC 4 cut(s) 244, 501, 1090, 1910
CviAII CATG 8 cut(s) 248, 318, 616, 689, 776, 959, 1240, 1500
CviQI GTAC 4 cut(s) 244, 501, 1090, 1910
DdeI CTNAG 8 cut(s) 1371, 1411, 1422, 1491, 1545, 2016, 2094, 2180
DpnI GATC 8 cut(s) 117, 235, 282, 296, 912, 963, 1026, 1215
DpnII GATC 8 cut(s) 115, 233, 280, 294, 910, 961, 1024, 1213
EaeI YGGCCR 5 cut(s) 61, 625, 1331, 1451, 1586
Eam1104I CTCTTC 4 cut(s) 871, 1153, 2070, 2132
EarI CTCTTC 4 cut(s) 871, 1153, 2070, 2132
Eco130I CCWWGG 4 cut(s) 165, 1104, 1239, 1839
Eco147I AGGCCT 2 cut(s) 1303, 1838
Eco31I GGTCTC 1 cut(s) 2097
Eco47I GGWCC 3 cut(s) 842, 2104, 2190
Eco57I CTGAAG 1 cut(s) 691
Eco88I CYCGRG 1 cut(s) 695
EcoRII CCWGG 3 cut(s) 33, 1171, 1399
EcoT14I CCWWGG 4 cut(s) 165, 1104, 1239, 1839
ErhI CCWWGG 4 cut(s) 165, 1104, 1239, 1839
FaeI CATG 8 cut(s) 251, 321, 619, 692, 779, 962, 1243, 1503
FalI AAGNNNNNCTT 6 cut(s) 374, 406, 1045, 1077, 1607, 1639
FaqI GGGAC 2 cut(s) 521, 567
FatI CATG 8 cut(s) 247, 317, 615, 688, 775, 958, 1239, 1499
FauI CCCGC 1 cut(s) 1333
FbaI TGATCA 1 cut(s) 910
FblI GTMKAC 2 cut(s) 865, 1057
FokI GGATG 4 cut(s) 543, 958, 2093, 2100
FspBI CTAG 8 cut(s) 173, 828, 1320, 1362, 1440, 1536, 1791, 1998
GlaI GCGC 2 cut(s) 1134, 1858
GsaI CCCAGC 1 cut(s) 1464
GsuI CTGGAG 2 cut(s) 678, 1731
HapII CCGG 1 cut(s) 1270
HgaI GACGC 1 cut(s) 1384
HhaI GCGC 2 cut(s) 1135, 1859
Hin1I GRCGYC 1 cut(s) 1376
Hin1II CATG 8 cut(s) 251, 321, 619, 692, 779, 962, 1243, 1503
Hin6I GCGC 2 cut(s) 1133, 1857
HinP1I GCGC 2 cut(s) 1133, 1857
HincII GTYRAC 2 cut(s) 1190, 1867
HindII GTYRAC 2 cut(s) 1190, 1867
HindIII AAGCTT 1 cut(s) 464
HpaII CCGG 1 cut(s) 1270
HphI GGTGA 1 cut(s) 154
Hpy166II GTNNAC 7 cut(s) 458, 866, 1058, 1190, 1708, 1867, 1933
Hpy188III TCNNGA 3 cut(s) 657, 689, 1292
Hpy8I GTNNAC 7 cut(s) 458, 866, 1058, 1190, 1708, 1867, 1933
Hpy99I CGWCG 2 cut(s) 155, 275
HpyAV CCTTC 5 cut(s) 428, 436, 975, 1071, 1585
HpyCH4III ACNGT 6 cut(s) 606, 666, 1118, 1914, 2004, 2054
HpyCH4IV ACGT 3 cut(s) 150, 868, 1941
HpyF3I CTNAG 8 cut(s) 1371, 1411, 1422, 1491, 1545, 2016, 2094, 2180
HpySE526I ACGT 3 cut(s) 150, 868, 1941
Hsp92I GRCGYC 1 cut(s) 1376
Hsp92II CATG 8 cut(s) 251, 321, 619, 692, 779, 962, 1243, 1503
HspAI GCGC 2 cut(s) 1133, 1857
KpnI GGTACC 2 cut(s) 247, 1093
Ksp22I TGATCA 1 cut(s) 910
Kzo9I GATC 8 cut(s) 115, 233, 280, 294, 910, 961, 1024, 1213
LmnI GCTCC 5 cut(s) 83, 800, 1477, 1634, 1664
LweI GCATC 4 cut(s) 138, 265, 1088, 2029
MaeI CTAG 8 cut(s) 173, 828, 1320, 1362, 1440, 1536, 1791, 1998
MaeII ACGT 3 cut(s) 150, 868, 1941
MaeIII GTNAC 7 cut(s) 160, 329, 384, 763, 1016, 1417, 1974
MalI GATC 8 cut(s) 117, 235, 282, 296, 912, 963, 1026, 1215
MboI GATC 8 cut(s) 115, 233, 280, 294, 910, 961, 1024, 1213
MfeI CAATTG 1 cut(s) 1136
MhlI GDGCHC 2 cut(s) 1710, 2009
MlsI TGGCCA 4 cut(s) 63, 627, 1333, 1453
MluCI AATT 8 cut(s) 579, 652, 818, 998, 1136, 1483, 1951, 2034
MluNI TGGCCA 4 cut(s) 63, 627, 1333, 1453
MlyI GAGTC 6 cut(s) 152, 503, 746, 1055, 1139, 1189
MmeI TCCRAC 1 cut(s) 171
Mox20I TGGCCA 4 cut(s) 63, 627, 1333, 1453
MroXI GAANNNNTTC 2 cut(s) 446, 1851
MscI TGGCCA 4 cut(s) 63, 627, 1333, 1453
MseI TTAA 4 cut(s) 1035, 1052, 1896, 1950
MslI CAYNNNNRTG 2 cut(s) 86, 1940
Msp20I TGGCCA 4 cut(s) 63, 627, 1333, 1453
MspA1I CMGCKG 2 cut(s) 1340, 1460
MspCI CTTAAG 1 cut(s) 1051
MspI CCGG 1 cut(s) 1270
MspR9I CCNGG 3 cut(s) 35, 1173, 1401
MunI CAATTG 1 cut(s) 1136
MvaI CCWGG 3 cut(s) 35, 1173, 1401
MvnI CGCG 1 cut(s) 1857
NcoI CCATGG 1 cut(s) 1239
NdeII GATC 8 cut(s) 115, 233, 280, 294, 910, 961, 1024, 1213
NlaIII CATG 8 cut(s) 251, 321, 619, 692, 779, 962, 1243, 1503
NlaIV GGNNCC 2 cut(s) 245, 1091
NmeAIII GCCGAG 1 cut(s) 737
NmuCI GTSAC 3 cut(s) 160, 329, 1016
OliI CACNNNNGTG 1 cut(s) 86
PaeR7I CTCGAG 1 cut(s) 695
PagI TCATGA 1 cut(s) 688
PaqCI CACCTGC 1 cut(s) 92
PceI AGGCCT 2 cut(s) 1303, 1838
PcsI WCGNNNNNNNCGW 1 cut(s) 799
PdmI GAANNNNTTC 2 cut(s) 446, 1851
PfeI GAWTC 5 cut(s) 585, 899, 1208, 1727, 2176
PflFI GACNNNGTC 1 cut(s) 142
PflMI CCANNNNNTGG 2 cut(s) 893, 1460
PleI GAGTC 6 cut(s) 151, 503, 745, 1054, 1139, 1189
PpsI GAGTC 6 cut(s) 151, 503, 745, 1054, 1139, 1189
PsiI TTATAA 1 cut(s) 678
Psp6I CCWGG 3 cut(s) 33, 1171, 1399
PspFI CCCAGC 1 cut(s) 1460
PspGI CCWGG 3 cut(s) 33, 1171, 1399
PspN4I GGNNCC 2 cut(s) 245, 1091
PspPI GGNCC 3 cut(s) 842, 2104, 2190
PspXI VCTCGAGB 1 cut(s) 695
PstI CTGCAG 3 cut(s) 1671, 1759, 2164
PstNI CAGNNNCTG 3 cut(s) 1460, 1552, 1754
PsyI GACNNNGTC 1 cut(s) 142
PvuII CAGCTG 1 cut(s) 1460
RsaI GTAC 4 cut(s) 245, 502, 1091, 1911
RsaNI GTAC 4 cut(s) 244, 501, 1090, 1910
RseI CAYNNNNRTG 2 cut(s) 86, 1940
SaqAI TTAA 4 cut(s) 1035, 1052, 1896, 1950
Sau3AI GATC 8 cut(s) 115, 233, 280, 294, 910, 961, 1024, 1213
Sau96I GGNCC 3 cut(s) 842, 2104, 2190
SchI GAGTC 6 cut(s) 152, 503, 746, 1055, 1139, 1189
ScrFI CCNGG 3 cut(s) 35, 1173, 1401
SduI GDGCHC 2 cut(s) 1710, 2009
SfaNI GCATC 4 cut(s) 138, 265, 1088, 2029
SfcI CTRYAG 4 cut(s) 513, 1667, 1755, 2160
Sfr274I CTCGAG 1 cut(s) 695
SinI GGWCC 3 cut(s) 842, 2104, 2190
SlaI CTCGAG 1 cut(s) 695
SmiMI CAYNNNNRTG 2 cut(s) 86, 1940
SmlI CTYRAG 5 cut(s) 380, 695, 746, 1051, 1674
SmoI CTYRAG 5 cut(s) 380, 695, 746, 1051, 1674
SpeI ACTAGT 3 cut(s) 1361, 1535, 1790
Sse9I AATT 8 cut(s) 579, 652, 818, 998, 1136, 1483, 1951, 2034
SseBI AGGCCT 2 cut(s) 1303, 1838
SsiI CCGC 3 cut(s) 17, 1255, 1340
SspI AATATT 2 cut(s) 674, 1852
SspMI CTAG 8 cut(s) 173, 828, 1320, 1362, 1440, 1536, 1791, 1998
StuI AGGCCT 2 cut(s) 1303, 1838
StyD4I CCNGG 3 cut(s) 33, 1171, 1399
StyI CCWWGG 4 cut(s) 165, 1104, 1239, 1839
TaaI ACNGT 6 cut(s) 606, 666, 1118, 1914, 2004, 2054
TaiI ACGT 3 cut(s) 153, 871, 1944
TaqI TCGA 2 cut(s) 270, 696
TaqII GACCGA 1 cut(s) 155
TasI AATT 8 cut(s) 579, 652, 818, 998, 1136, 1483, 1951, 2034
TatI WGTACW 2 cut(s) 500, 1909
TfiI GAWTC 5 cut(s) 585, 899, 1208, 1727, 2176
Tru1I TTAA 4 cut(s) 1035, 1052, 1896, 1950
Tru9I TTAA 4 cut(s) 1035, 1052, 1896, 1950
TscAI CASTG 4 cut(s) 309, 328, 1123, 1894
TseFI GTSAC 3 cut(s) 160, 329, 1016
Tsp45I GTSAC 3 cut(s) 160, 329, 1016
TspDTI ATGAA 9 cut(s) 94, 306, 615, 684, 957, 1356, 1476, 1530, 1890
TspGWI ACGGA 1 cut(s) 89
TspRI CASTG 4 cut(s) 309, 328, 1123, 1894
Tth111I GACNNNGTC 1 cut(s) 142
Van91I CCANNNNNTGG 2 cut(s) 893, 1460
Vha464I CTTAAG 1 cut(s) 1051
VneI GTGCAC 1 cut(s) 1706
VpaK11BI GGWCC 3 cut(s) 842, 2104, 2190
XhoI CTCGAG 1 cut(s) 695
XmiI GTMKAC 2 cut(s) 865, 1057
XmnI GAANNNNTTC 2 cut(s) 446, 1851
XspI CTAG 8 cut(s) 173, 828, 1320, 1362, 1440, 1536, 1791, 1998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.