FvH4_7g03760

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000854
Physical Location & Seq
Reverse (-)
4277544 .. 4281723
4180 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g03760.t2

Sequence Viewer

Length: 2559 bp
ATGGACGACAGCTGTGCCGTGTGCGCCGATTCCCTCGAATGGGTTGCCTACGGCGCTTGCGGCCACAAGGACGTCTGCTCCACCTGCGTCGCCCGCCTCCGCTTCATCTGCGACGATCGCCGCTGCTGCATCTGCAAAACCCCCTCCGACGTCGTTTTCGTCACCAAGGCTTTAGGGGACTATACGAAGATGATCAAGGACTTTTCGGTGTTGCCGGCTCAAGGGAGGGAGGGCCGGTCGGGGCCGTACTGGTACCATGAAGACACGCAAGCGTTTTTTGATGATGTCGACCACTACAAGATGATCAAGGCAATGTGCAAGCTTTCGTGCAGTGAATGTGACAAGGCCGAGGAGCAGACGAATGATAACCCCAAGCGTCGCCCTGCTAGGTTTAGGAACATTGGTCAGCTCAAGGGTCATTTGTATCACCAGCATAGGTTGTCTATGTGCCCTCTATGTTTGGAAGCAAGGAAGGTATTTATTTGTGAACAAAAGCTGTATACTAAAGCACAGTTGAAGCAGCATATAAGTACGGGTGACTCTGAAGTTGATGGAAGTGAGAGTGAAAGAGGTGGCTTTATGGGGCATCCTATGTGTGACTTCTGCGGAACACCATTCTATGGCGATAATGAACATTACACCCACATGGGTACTGAACACTTTAAATGTCATTTATGCCACGGTCCTGGACAATATGAATTTTTTAGGAACTATGATGATCTCGAGATGCATTTCCGCCACAGCCATTTCCTATGTGAAGATGAGTCCTGTCTTGCCAAAAAGTTTATTGTCTTCCAATCTGAGGCAGAAATGAAGAGGCACAATACTATTGAACATGCGGGGCGTATGTCTCGTTCCAAGCGTAATGCTGCTCTCCAGATACCGACTAGCTTCCGATATCGACGAAGTAGTGAACAAGATAATAGGCGTGGAAGAGGTCGATCATTTCATCGTGAATCTCGTGATTCTTCTGATAGTCAACTTTCTATGGCAATTCAAGCTAGTTTGGAGACATCTCCTACCGATGATAGCGCATTTCATGGTACTTCATCATCCACTGGGCACGCTGCTTCAGATCTTGGAGATACAAATGATATTGATCCAATTATTAGTCCATTTGAATCCTTAAGTACGACAGATGCCGAAGCATCTTCAAGGTACCTTCAAGCCTTGGGGGGGCTAAGTTTTGGGACAGCGCCTTTGCAGGACTCTTCCTTTCCTCCACTTGCACCTGGAAGCAGTCAATCAACACCCATCTCGGATGGTTTGCCTAATAACTCTATGGCAGCTCATCTCCGCCGGCAAAACAAACGCAAGGTGGCTGTTAAGCCTGTTATTAGTGCCAGTCAGGCCTGGCCAGCAGCTGGGCGTGCACCTGTAGTACCACCTAGTAGTTCAGCTCAAGCATGGCCTACAACACAGGTTTCACCTTCGATATCACGTGGTTCCGGTCAGAACAAAAAGGCCTCTGGGAGTAGACCAGGGCCTTCTAGTTATGCAAGTTCTGCTCAAGCTCAAGTTGAGACTCGACAGACAACAGTTCCTGGATTCTCATCGTCTGTTTCTTCTGCTAGGATTAGCCACTCTGCACCTGCCCCTAATTTGGTTGAGAATGGTACAATTCAACCTTCCATCTCTGATTTCCCTCCAGTTTCTGCTGCACAAGTATGTAAGATGCCCTCAACTAACCAGCCAACTCAGCCTATATTGAAAGTGGCGGATGTTCAAACTGCTAACAAGTCCTTGGTGGAAAAGATTCGCGCTGCTGTTGACTTTGACGAAGAGAAATACAGTGTTTTTAAGGACATATCAGGGCAGTATCGTCAGGGTTTAGTTGACACAGATGTATATTTAGATTTTGTTCGGCAGTTTGGCTTGTTGCATCTTGTCCTTGACTTGGCTAGACTCTGTCCTGATACTCACAAGCAGAGAGAGCTGATTGATGCCTACAATAAGAGTATGCGAAGCAATGGGGCACAAGATAATGGATGGTCTCAGGGCAATGTCCGATTGAAAGATTCAAAGAAAGGCAAAGGGAAGAGTTTAGAAATAGCAAACAGCAAGTCTAAAGGGAAGAGTCTTGAAGCGGAAAACAGTAGTTCTGCGGATACATTAGCAGATAGCATCATTAATTCTGTACGGGAACTTCAATCAAATCACAGGCCTTTAGAAGAAGTGGTTGAGGTGTTGTCGAAGGATGGATACCGTGCTGCCAAAGGTAAATCAAAGTTGATAGTTGATGAACGACAGGATGAATTAAACTCTCGCAGTCAAGCACCAACAGAGCCGAGGAGCCAAAAGGATCCGGTGCCTGCTGTTAGTGGATCTAGTCTTCATCTCGGGGATGGTGGTGGAGGAAGCAAGCAGCGGAAGAAAACCTCAAAATTCCATAGAGTTCGCTTGGGTGATGGCTCTGCTGCCGCTCTCTTGGATCTTAAAAATTCTGATCCTCAGCCAGATAATGGGGGTGAACAGTTAGATGGGAGCGGTAACTCGGCCGGAGGTTTGCCCGTCCATGGTGTTTGGAGACACAAAGCCGCAAATAAACTTTTTAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

853

Amino Acids

93.34

Weight (kDa)

8.3

Isoelectric Point (pI)

53.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C2H2_13 PF23230 8 - 59 3.4e-13 C2H2-type zinc finger
PAH_ZNF598 PF23202 361 - 436 1.8e-20 ZNF598 PAH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 92, 1600
AatII GACGTC 2 cut(s) 75, 153
Acc36I ACCTGC 2 cut(s) 92, 1600
Acc65I GGTACC 2 cut(s) 252, 1158
AccB1I GGYRCC 3 cut(s) 252, 1158, 2308
AccB7I CCANNNNNTGG 3 cut(s) 620, 1364, 2462
AccBSI CCGCTC 2 cut(s) 2423, 2487
AccI GTMKAC 3 cut(s) 288, 500, 1477
AccII CGCG 1 cut(s) 1761
AclWI GGATC 6 cut(s) 1094, 2297, 2310, 2332, 2439, 2441
AcoI YGGCCR 3 cut(s) 61, 1355, 2496
AcsI RAATTY 3 cut(s) 698, 2384, 2440
AcuI CTGAAG 2 cut(s) 564, 1056
AcvI CACGTG 1 cut(s) 1442
AcyI GRCGYC 2 cut(s) 72, 150
AflII CTTAAG 1 cut(s) 1126
AjnI CCWGG 5 cut(s) 685, 1231, 1352, 1480, 1543
Alw21I GWGCWC 1 cut(s) 1375
Alw26I GTCTC 5 cut(s) 855, 1004, 1517, 1998, 2521
Alw44I GTGCAC 1 cut(s) 1371
AlwI GGATC 6 cut(s) 1094, 2297, 2310, 2332, 2439, 2441
AlwNI CAGNNNCTG 3 cut(s) 1364, 1544, 1655
Ama87I CYCGRG 2 cut(s) 722, 2339
ApaLI GTGCAC 1 cut(s) 1371
ApoI RAATTY 3 cut(s) 698, 2384, 2440
ArsI GACNNNNNNTTYG 6 cut(s) 140, 172, 1183, 1215, 2048, 2080
AseI ATTAAT 1 cut(s) 2130
Asp700I GAANNNNTTC 1 cut(s) 1755
Asp718I GGTACC 2 cut(s) 252, 1158
AspLEI GCGC 5 cut(s) 26, 56, 1034, 1198, 1763
AspS9I GGNCC 4 cut(s) 232, 242, 683, 1484
AsuHPI GGTGA 6 cut(s) 154, 419, 548, 1419, 2417, 2480
AvaI CYCGRG 2 cut(s) 722, 2339
AvaII GGWCC 1 cut(s) 683
BaeGI GKGCMC 4 cut(s) 452, 1065, 1375, 1978
BalI TGGCCA 1 cut(s) 1357
BamHI GGATCC 1 cut(s) 2302
BanI GGYRCC 3 cut(s) 252, 1158, 2308
BarI GAAGNNNNNNTAC 4 cut(s) 2130, 2162, 2186, 2218
BauI CACGAG 1 cut(s) 960
BbrPI CACGTG 1 cut(s) 1442
BbsI GAAGAC 3 cut(s) 267, 784, 2324
Bbv12I GWGCWC 1 cut(s) 1375
BbvCI CCTCAGC 1 cut(s) 2451
BccI CCATC 9 cut(s) 545, 1256, 1262, 1640, 1983, 2192, 2339, 2402, 2474
BceAI ACGGC 3 cut(s) 2, 67, 229
BcgI CGANNNNNNTGC 3 cut(s) 26, 30, 60
BciT130I CCWGG 5 cut(s) 687, 1233, 1354, 1482, 1545
BciVI GTATCC 2 cut(s) 2101, 2195
BclI TGATCA 2 cut(s) 192, 303
BcoDI GTCTC 5 cut(s) 855, 1004, 1517, 1998, 2521
BfaI CTAG 8 cut(s) 387, 888, 1002, 1389, 1491, 1572, 1902, 2328
BfmI CTRYAG 1 cut(s) 1377
BfoI RGCGCY 2 cut(s) 57, 1199
BfrI CTTAAG 1 cut(s) 1126
BfuAI ACCTGC 2 cut(s) 92, 1600
BfuI GTATCC 2 cut(s) 2101, 2195
BglI GCCNNNNNGGC 1 cut(s) 1349
BglII AGATCT 1 cut(s) 1075
Bme1390I CCNGG 5 cut(s) 687, 1233, 1354, 1482, 1545
Bme18I GGWCC 1 cut(s) 683
BmeT110I CYCGRG 2 cut(s) 722, 2339
BmgT120I GGNCC 4 cut(s) 232, 242, 683, 1484
BmiI GGNNCC 7 cut(s) 243, 254, 1160, 1447, 2294, 2304, 2310
BmrFI CCNGG 5 cut(s) 687, 1233, 1354, 1482, 1545
BmrI ACTGGG 1 cut(s) 1068
BmsI GCATC 9 cut(s) 138, 595, 717, 1129, 1157, 1665, 1891, 1933, 2133
BmuI ACTGGG 1 cut(s) 1068
BpiI GAAGAC 3 cut(s) 267, 784, 2324
BpmI CTGGAG 2 cut(s) 860, 1632
Bpu10I CCTNAGC 1 cut(s) 2451
BpuEI CTTGAG 5 cut(s) 204, 395, 1386, 1494, 1500
BsaAI YACGTR 1 cut(s) 1442
BsaBI GATNNNNATC 2 cut(s) 1098, 1552
BsaHI GRCGYC 2 cut(s) 72, 150
BsaI GGTCTC 1 cut(s) 1998
BsaJI CCNNGG 8 cut(s) 165, 348, 679, 1170, 1481, 1743, 2288, 2515
BsaWI WCCGGW 2 cut(s) 1448, 2305
BsaXI ACNNNNNCTCC 4 cut(s) 62, 92, 221, 251
Bse118I RCCGGY 3 cut(s) 214, 234, 1299
Bse1I ACTGG 4 cut(s) 254, 1063, 1344, 1649
Bse3DI GCAATG 3 cut(s) 318, 1975, 2008
Bse8I GATNNNNATC 2 cut(s) 1098, 1552
BseBI CCWGG 5 cut(s) 687, 1233, 1354, 1482, 1545
BseDI CCNNGG 8 cut(s) 165, 348, 679, 1170, 1481, 1743, 2288, 2515
BseGI GGATG 8 cut(s) 586, 1052, 1267, 1726, 1994, 2203, 2257, 2350
BseJI GATNNNNATC 2 cut(s) 1098, 1552
BseMI GCAATG 3 cut(s) 318, 1975, 2008
BseMII CTCAG 4 cut(s) 792, 1712, 2009, 2465
BseNI ACTGG 4 cut(s) 254, 1063, 1344, 1649
BseRI GAGGAG 2 cut(s) 365, 2305
BseSI GKGCMC 4 cut(s) 452, 1065, 1375, 1978
BseX3I CGGCCG 1 cut(s) 2496
BseYI CCCAGC 1 cut(s) 1364
BsgI GTGCAG 3 cut(s) 349, 1572, 1644
Bsh1236I CGCG 1 cut(s) 1761
Bsh1285I CGRYCG 3 cut(s) 118, 239, 2499
BshNI GGYRCC 3 cut(s) 252, 1158, 2308
BsiEI CGRYCG 3 cut(s) 118, 239, 2499
BsiHKAI GWGCWC 1 cut(s) 1375
BsiHKCI CYCGRG 2 cut(s) 722, 2339
BsiSI CCGG 6 cut(s) 215, 235, 1300, 1449, 2306, 2499
BslFI GGGAC 2 cut(s) 191, 1204
BsmAI GTCTC 5 cut(s) 855, 1004, 1517, 1998, 2521
BsmFI GGGAC 2 cut(s) 191, 1204
Bso31I GGTCTC 1 cut(s) 1998
BsoBI CYCGRG 2 cut(s) 722, 2339
Bsp1286I GDGCHC 4 cut(s) 452, 1065, 1375, 1978
Bsp19I CCATGG 1 cut(s) 2515
BspCNI CTCAG 4 cut(s) 793, 1711, 2008, 2464
BspFNI CGCG 1 cut(s) 1761
BspLI GGNNCC 7 cut(s) 243, 254, 1160, 1447, 2294, 2304, 2310
BspMI ACCTGC 2 cut(s) 92, 1600
BspPI GGATC 6 cut(s) 1094, 2297, 2310, 2332, 2439, 2441
BspT107I GGYRCC 3 cut(s) 252, 1158, 2308
BspTI CTTAAG 1 cut(s) 1126
BspTNI GGTCTC 1 cut(s) 1998
BsrBI CCGCTC 2 cut(s) 2423, 2487
BsrDI GCAATG 3 cut(s) 318, 1975, 2008
BsrFI RCCGGY 3 cut(s) 214, 234, 1299
BsrI ACTGG 4 cut(s) 254, 1063, 1344, 1649
BssAI RCCGGY 3 cut(s) 214, 234, 1299
BssECI CCNNGG 8 cut(s) 165, 348, 679, 1170, 1481, 1743, 2288, 2515
BssNAI GTATAC 1 cut(s) 501
BssNI GRCGYC 2 cut(s) 72, 150
BssSI CACGAG 1 cut(s) 960
BssT1I CCWWGG 4 cut(s) 165, 1170, 1743, 2515
Bst1107I GTATAC 1 cut(s) 501
Bst2BI CACGAG 1 cut(s) 960
Bst2UI CCWGG 5 cut(s) 687, 1233, 1354, 1482, 1545
Bst4CI ACNGT 7 cut(s) 513, 683, 1540, 1793, 2096, 2207, 2475
Bst6I CTCTTC 6 cut(s) 809, 928, 1216, 1776, 2033, 2069
BstACI GRCGYC 2 cut(s) 72, 150
BstAFI CTTAAG 1 cut(s) 1126
BstAPI GCANNNNNTGC 1 cut(s) 1505
BstBAI YACGTR 1 cut(s) 1442
BstDEI CTNAG 5 cut(s) 801, 1181, 1698, 1995, 2451
BstDSI CCRYGG 2 cut(s) 679, 2515
BstF5I GGATG 8 cut(s) 586, 1052, 1267, 1726, 1994, 2203, 2257, 2350
BstFNI CGCG 1 cut(s) 1761
BstH2I RGCGCY 2 cut(s) 57, 1199
BstHHI GCGC 5 cut(s) 26, 56, 1034, 1198, 1763
BstMAI GTCTC 5 cut(s) 855, 1004, 1517, 1998, 2521
BstMCI CGRYCG 3 cut(s) 118, 239, 2499
BstNI CCWGG 5 cut(s) 687, 1233, 1354, 1482, 1545
BstNSI RCATGY 1 cut(s) 839
BstSCI CCNGG 5 cut(s) 685, 1231, 1352, 1480, 1543
BstSFI CTRYAG 1 cut(s) 1377
BstSLI GKGCMC 4 cut(s) 452, 1065, 1375, 1978
BstUI CGCG 1 cut(s) 1761
BstV2I GAAGAC 3 cut(s) 267, 784, 2324
BstX2I RGATCY 4 cut(s) 1075, 2302, 2324, 2431
BstXI CCANNNNNNTGG 1 cut(s) 686
BstYI RGATCY 4 cut(s) 1075, 2302, 2324, 2431
BstZ17I GTATAC 1 cut(s) 501
BstZI CGGCCG 1 cut(s) 2496
BsuI GTATCC 2 cut(s) 2101, 2195
BtgI CCRYGG 2 cut(s) 679, 2515
BtsCI GGATG 8 cut(s) 586, 1052, 1267, 1726, 1994, 2203, 2257, 2350
BtsI GCAGTG 1 cut(s) 337
BtsIMutI CAGTG 3 cut(s) 337, 1056, 1798
BveI ACCTGC 2 cut(s) 92, 1600
CaiI CAGNNNCTG 3 cut(s) 1364, 1544, 1655
CfoI GCGC 5 cut(s) 26, 56, 1034, 1198, 1763
Cfr10I RCCGGY 3 cut(s) 214, 234, 1299
Cfr13I GGNCC 4 cut(s) 232, 242, 683, 1484
CseI GACGC 2 cut(s) 76, 365
CviAII CATG 6 cut(s) 257, 646, 836, 1040, 1407, 2516
DdeI CTNAG 5 cut(s) 801, 1181, 1698, 1995, 2451
DraI TTTAAA 1 cut(s) 664
EaeI YGGCCR 3 cut(s) 61, 1355, 2496
EagI CGGCCG 1 cut(s) 2496
Eam1104I CTCTTC 6 cut(s) 809, 928, 1216, 1776, 2033, 2069
EarI CTCTTC 6 cut(s) 809, 928, 1216, 1776, 2033, 2069
EciI GGCGGA 3 cut(s) 725, 1286, 1733
EclXI CGGCCG 1 cut(s) 2496
Eco130I CCWWGG 4 cut(s) 165, 1170, 1743, 2515
Eco147I AGGCCT 3 cut(s) 1352, 1466, 2164
Eco31I GGTCTC 1 cut(s) 1998
Eco32I GATATC 2 cut(s) 899, 1437
Eco47I GGWCC 1 cut(s) 683
Eco52I CGGCCG 1 cut(s) 2496
Eco57I CTGAAG 2 cut(s) 564, 1056
Eco72I CACGTG 1 cut(s) 1442
Eco88I CYCGRG 2 cut(s) 722, 2339
EcoO109I RGGNCCY 1 cut(s) 1484
EcoRII CCWGG 5 cut(s) 685, 1231, 1352, 1480, 1543
EcoRV GATATC 2 cut(s) 899, 1437
EcoT14I CCWWGG 4 cut(s) 165, 1170, 1743, 2515
EcoT22I ATGCAT 1 cut(s) 732
ErhI CCWWGG 4 cut(s) 165, 1170, 1743, 2515
FaeI CATG 6 cut(s) 260, 649, 839, 1043, 1410, 2519
FaqI GGGAC 2 cut(s) 191, 1204
FatI CATG 6 cut(s) 256, 645, 835, 1039, 1406, 2515
FauI CCCGC 2 cut(s) 101, 832
FbaI TGATCA 2 cut(s) 192, 303
FblI GTMKAC 3 cut(s) 288, 500, 1477
FokI GGATG 8 cut(s) 573, 1039, 1274, 1733, 2001, 2210, 2264, 2357
FspBI CTAG 8 cut(s) 387, 888, 1002, 1389, 1491, 1572, 1902, 2328
GlaI GCGC 5 cut(s) 25, 55, 1033, 1197, 1762
GsaI CCCAGC 1 cut(s) 1368
GsuI CTGGAG 2 cut(s) 860, 1632
HaeII RGCGCY 2 cut(s) 57, 1199
HapII CCGG 6 cut(s) 215, 235, 1300, 1449, 2306, 2499
HgaI GACGC 2 cut(s) 76, 365
HhaI GCGC 5 cut(s) 26, 56, 1034, 1198, 1763
Hin1I GRCGYC 2 cut(s) 72, 150
Hin1II CATG 6 cut(s) 260, 649, 839, 1043, 1410, 2519
Hin6I GCGC 5 cut(s) 24, 54, 1032, 1196, 1761
HinP1I GCGC 5 cut(s) 24, 54, 1032, 1196, 1761
HincII GTYRAC 4 cut(s) 289, 980, 1771, 1837
HindII GTYRAC 4 cut(s) 289, 980, 1771, 1837
HindIII AAGCTT 1 cut(s) 320
HpaII CCGG 6 cut(s) 215, 235, 1300, 1449, 2306, 2499
HphI GGTGA 6 cut(s) 154, 419, 548, 1419, 2417, 2480
Hpy188III TCNNGA 7 cut(s) 722, 724, 877, 953, 962, 1913, 2081
Hpy99I CGWCG 6 cut(s) 92, 116, 152, 155, 381, 906
HpyAV CCTTC 6 cut(s) 466, 1172, 1440, 1497, 1638, 2188
HpyCH4III ACNGT 7 cut(s) 513, 683, 1540, 1793, 2096, 2207, 2475
HpyCH4IV ACGT 3 cut(s) 72, 150, 1441
HpyF3I CTNAG 5 cut(s) 801, 1181, 1698, 1995, 2451
HpySE526I ACGT 3 cut(s) 72, 150, 1441
Hsp92I GRCGYC 2 cut(s) 72, 150
Hsp92II CATG 6 cut(s) 260, 649, 839, 1043, 1410, 2519
HspAI GCGC 5 cut(s) 24, 54, 1032, 1196, 1761
KpnI GGTACC 2 cut(s) 256, 1162
KroI GCCGGC 2 cut(s) 214, 1299
KroNI GCCGGC 2 cut(s) 216, 1301
Ksp22I TGATCA 2 cut(s) 192, 303
LmnI GCTCC 4 cut(s) 83, 352, 2292, 2484
LweI GCATC 9 cut(s) 138, 595, 717, 1129, 1157, 1665, 1891, 1933, 2133
MaeI CTAG 8 cut(s) 387, 888, 1002, 1389, 1491, 1572, 1902, 2328
MaeII ACGT 3 cut(s) 72, 150, 1441
MaeIII GTNAC 5 cut(s) 160, 338, 536, 596, 2489
MbiI CCGCTC 2 cut(s) 2423, 2487
MflI RGATCY 4 cut(s) 1075, 2302, 2324, 2431
MhlI GDGCHC 4 cut(s) 452, 1065, 1375, 1978
MlsI TGGCCA 1 cut(s) 1357
MluCI AATT 9 cut(s) 698, 993, 1104, 1600, 1620, 2131, 2255, 2384, 2440
MluNI TGGCCA 1 cut(s) 1357
MlyI GAGTC 6 cut(s) 533, 773, 1202, 1519, 1899, 2086
MmeI TCCRAC 1 cut(s) 171
Mox20I TGGCCA 1 cut(s) 1357
Mph1103I ATGCAT 1 cut(s) 732
MroNI GCCGGC 2 cut(s) 214, 1299
MroXI GAANNNNTTC 1 cut(s) 1755
MscI TGGCCA 1 cut(s) 1357
MseI TTAA 7 cut(s) 663, 1127, 1326, 1800, 2130, 2258, 2436
MslI CAYNNNNRTG 2 cut(s) 644, 1666
Msp20I TGGCCA 1 cut(s) 1357
MspA1I CMGCKG 4 cut(s) 12, 123, 1364, 2368
MspCI CTTAAG 1 cut(s) 1126
MspI CCGG 6 cut(s) 215, 235, 1300, 1449, 2306, 2499
MspR9I CCNGG 5 cut(s) 687, 1233, 1354, 1482, 1545
MvaI CCWGG 5 cut(s) 687, 1233, 1354, 1482, 1545
MvnI CGCG 1 cut(s) 1761
NaeI GCCGGC 2 cut(s) 216, 1301
NcoI CCATGG 1 cut(s) 2515
NgoMIV GCCGGC 2 cut(s) 214, 1299
NlaIII CATG 6 cut(s) 260, 649, 839, 1043, 1410, 2519
NlaIV GGNNCC 7 cut(s) 243, 254, 1160, 1447, 2294, 2304, 2310
NmeAIII GCCGAG 3 cut(s) 373, 2313, 2474
NmuCI GTSAC 4 cut(s) 160, 338, 536, 596
NsiI ATGCAT 1 cut(s) 732
NspI RCATGY 1 cut(s) 839
PaeR7I CTCGAG 1 cut(s) 722
PaqCI CACCTGC 2 cut(s) 92, 1600
PceI AGGCCT 3 cut(s) 1352, 1466, 2164
PcsI WCGNNNNNNNCGW 3 cut(s) 156, 859, 958
PdiI GCCGGC 2 cut(s) 216, 1301
PdmI GAANNNNTTC 1 cut(s) 1755
PfeI GAWTC 7 cut(s) 29, 956, 965, 1121, 1548, 1756, 2018
PflFI GACNNNGTC 1 cut(s) 1908
PflMI CCANNNNNTGG 3 cut(s) 620, 1364, 2462
PfoI TCCNGGA 2 cut(s) 685, 1543
Ple19I CGATCG 1 cut(s) 118
PleI GAGTC 6 cut(s) 533, 772, 1202, 1519, 1899, 2085
PmaCI CACGTG 1 cut(s) 1442
PmlI CACGTG 1 cut(s) 1442
PpsI GAGTC 6 cut(s) 533, 772, 1202, 1519, 1899, 2085
Ppu21I YACGTR 1 cut(s) 1442
PshBI ATTAAT 1 cut(s) 2130
Psp6I CCWGG 5 cut(s) 685, 1231, 1352, 1480, 1543
PspCI CACGTG 1 cut(s) 1442
PspFI CCCAGC 1 cut(s) 1364
PspGI CCWGG 5 cut(s) 685, 1231, 1352, 1480, 1543
PspN4I GGNNCC 7 cut(s) 243, 254, 1160, 1447, 2294, 2304, 2310
PspPI GGNCC 4 cut(s) 232, 242, 683, 1484
PsrI GAACNNNNNNTAC 2 cut(s) 838, 870
PstNI CAGNNNCTG 3 cut(s) 1364, 1544, 1655
PsuI RGATCY 4 cut(s) 1075, 2302, 2324, 2431
PsyI GACNNNGTC 1 cut(s) 1908
PvuI CGATCG 1 cut(s) 118
PvuII CAGCTG 2 cut(s) 12, 1364
RseI CAYNNNNRTG 2 cut(s) 644, 1666
SalI GTCGAC 1 cut(s) 287
SaqAI TTAA 7 cut(s) 663, 1127, 1326, 1800, 2130, 2258, 2436
Sau96I GGNCC 4 cut(s) 232, 242, 683, 1484
SchI GAGTC 6 cut(s) 533, 773, 1202, 1519, 1899, 2086
ScrFI CCNGG 5 cut(s) 687, 1233, 1354, 1482, 1545
SduI GDGCHC 4 cut(s) 452, 1065, 1375, 1978
SfaNI GCATC 9 cut(s) 138, 595, 717, 1129, 1157, 1665, 1891, 1933, 2133
SfcI CTRYAG 1 cut(s) 1377
Sfr274I CTCGAG 1 cut(s) 722
SinI GGWCC 1 cut(s) 683
SlaI CTCGAG 1 cut(s) 722
SmiMI CAYNNNNRTG 2 cut(s) 644, 1666
SmlI CTYRAG 7 cut(s) 219, 410, 722, 1126, 1401, 1509, 1515
SmoI CTYRAG 7 cut(s) 219, 410, 722, 1126, 1401, 1509, 1515
Sse9I AATT 9 cut(s) 698, 993, 1104, 1600, 1620, 2131, 2255, 2384, 2440
SseBI AGGCCT 3 cut(s) 1352, 1466, 2164
SspMI CTAG 8 cut(s) 387, 888, 1002, 1389, 1491, 1572, 1902, 2328
StuI AGGCCT 3 cut(s) 1352, 1466, 2164
StyD4I CCNGG 5 cut(s) 685, 1231, 1352, 1480, 1543
StyI CCWWGG 4 cut(s) 165, 1170, 1743, 2515
TaaI ACNGT 7 cut(s) 513, 683, 1540, 1793, 2096, 2207, 2475
TaiI ACGT 3 cut(s) 75, 153, 1444
TaqI TCGA 8 cut(s) 36, 288, 723, 901, 940, 1433, 1528, 2192
TasI AATT 9 cut(s) 698, 993, 1104, 1600, 1620, 2131, 2255, 2384, 2440
TauI GCSGC 4 cut(s) 63, 123, 2423, 2540
TfiI GAWTC 7 cut(s) 29, 956, 965, 1121, 1548, 1756, 2018
Tru1I TTAA 7 cut(s) 663, 1127, 1326, 1800, 2130, 2258, 2436
Tru9I TTAA 7 cut(s) 663, 1127, 1326, 1800, 2130, 2258, 2436
TscAI CASTG 3 cut(s) 337, 1063, 1798
TseFI GTSAC 4 cut(s) 160, 338, 536, 596
Tsp45I GTSAC 4 cut(s) 160, 338, 536, 596
TspRI CASTG 3 cut(s) 337, 1063, 1798
Tth111I GACNNNGTC 1 cut(s) 1908
Van91I CCANNNNNTGG 3 cut(s) 620, 1364, 2462
Vha464I CTTAAG 1 cut(s) 1126
VneI GTGCAC 1 cut(s) 1371
VpaK11BI GGWCC 1 cut(s) 683
VspI ATTAAT 1 cut(s) 2130
XapI RAATTY 3 cut(s) 698, 2384, 2440
XceI RCATGY 1 cut(s) 839
XhoI CTCGAG 1 cut(s) 722
XmiI GTMKAC 3 cut(s) 288, 500, 1477
XmnI GAANNNNTTC 1 cut(s) 1755
XspI CTAG 8 cut(s) 387, 888, 1002, 1389, 1491, 1572, 1902, 2328
ZraI GACGTC 2 cut(s) 73, 151
Zsp2I ATGCAT 1 cut(s) 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.