FvH4_7g15180

C-terminal binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0001355
Physical Location & Seq
Forward (+)
13214215 .. 13219434
5220 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g15180.t1

Sequence Viewer

Length: 2007 bp
ATGAGCACCACCGCCGGCATCGGATCCCCCGCCACAATGTCCCACCACCGCACCACCCAAACAACGCCGCCGTCGCTCCCCCTCGTCGTCACTCTCAACTGCATCGACGACTTCGCCATGGAGCAAGACTGCCTCTCCGGCGTCGCCGCCGTGGAACACGTCCCTCTCAGCCGCTTGGCCGACGGCAGGATCGAGTCCGCCTCCGCCGTGCTTCTCCAATCCCTCGCGTACCTCCCACGCGCCGCGCAGCGTCGGCTGCGTCCGTATCAGCTTATTCTCTGCCTTGGCTCTGCTGACCGGGCTACGGATTCGGCTCTCGCCGCCGACCTCGGGCTCCGGCTCGTCCACGTGGACACCTCCCGCGCGGAGGAGATCGCCGATACTGTTATGGCGCTGTTTCTAGGGTTGTTGAGGAGGACGCACTTGCTCTCGCGCCAGACTCTTTCGGCTTCCGGGTGGCTTGGTTCGGTTCAGCCGCTTTGCCGGGGGATGAGGCGGTGCCGGGGCTTGGTTTTGGGGATTATTGGTAGATCTGCGGCGGCGAGGTCTCTGGCTACTAGGAGCTTGGCCTTCAAGATGAGCGTGCTCTATTTTGATGTAGAGGTGAGCGGAACATTGAGTAGATCTTATGGCTTTCCTTCTGCCGCTCGAAAGATGGATACTCTAAATGACTTGCTAGCTGCGAGTGATCTCATTTCGCTTCATTGTGCTGTGACGAATGAAACAGTTCAGATTCTCAATGCTGAATGCCTACAGCATGTAAAGCCTGGAGCATTCCTTGTAAACACAGGTAGCAGTCAGCTGTTGGATGATTGTTTTGTGAAACAGCTTTTGATTGATGGAACTTTAGCTGGGTGTGCTTTAGATGGTGCTGAAGGGCCGCAATGGATGGAAGCATGGTGTTGTTTACATTTAACAACTTATGCGCATATGCCCATTAAACGGGGATGGGATGGGAAAGAACGCCTTTTTATGGATGTAAAGGAGATGCCCAATGTGTTGATACTTCCGCACAGTGCAGATTATAGTGAAGAAGTATGGCTGGAGATAAGGGAGAAAGCAATCTCTGTATTGCAGACATTCTTCTTCGATGGGGTTGTTCCAAATAATGTTGTATCTGATGAGGATGAGGAAAGCGAAATAGGTGATGAAAATGAACACTCTGATAAACTGGAGCAAGAAAATCCCCTACAGCTAGCCGTTGTCCAGCAATTAACTGAAGTTAGCCATGCAAGTCCAGAAAGCTCCCAGAATAAAGAAATCAATCAATCCAAGGAGTCTTCTAGCCAGCAAGGTTCGGGTTTATCTCAAAATTCAATTACTCGGTCTGATGGAAGACGAAGTAGATCAGGTAAGAAAGCGAAAAAGAGGCACACACATCAGAAATCTCAGAAAAAATCAGATGAACCTTTACTAGAAAAAGAAAGTACCTCGCAGCGAGAGGAAGATACAACTATGAGTGGCACAGATCAAGCGTTAAGTTCCGGTTCTCGGTTTGCTTCCCCTGAAGACTCGAGAAGTAGGAAAACACCTATAGAATCAATGCAAGAATCGCCGTCTGACCAGCTACTAAAATCTAGAAAGAGGCTGAGTGGAAAGCCTGGTGAATTGTTGAAGGATGGCTATGTTGTAGCTCTGTATGCAAGAGATGGCCCCAGTCTTCATGTGGCAAGGCAAAGAGTTAAAGGTGGTGGTTGGTTCCTAGATACCATGTCAAATGTAACAAAAAGGGATCCTGCGGCTCAGTTCCTCATTGTAATCAGAAGCAAGGATACAATTGGTTTGCGATCTTTTGCTGCTGGTGGGAAGTTACTGCAGATAAATAGAAGAATGGAATTTGTATTCGCAAGTCACAGTTTTGATGTTTGGGAGAGTTGGATGTTGGAAGGTTCTCTGGATGAGTGTAGGCTTGTTAACTGTAGAAATCCACTGGCTGTTTTGGATGTAAGCATCGAGATTCTGGCCACTGTAGGGGAAGATGATGGGGTAACACGCTGGCTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008360 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010482 GO:0010494 GO:0010769 GO:0012505 GO:0016043 GO:0016049 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030856 GO:0031128 GO:0031129 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0040007 GO:0042802 GO:0042803 GO:0042814 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0046983 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048468 GO:0048530 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051302 GO:0060284 GO:0060560 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071826 GO:0071840 GO:0090558 GO:0090567 GO:0090626 GO:0090696 GO:0090697 GO:0090698 GO:0098791 GO:0099402 GO:1905392 GO:1990904 GO:2000024 GO:2000026 GO:2000039
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2-Hacid_dh_C

Protein Analysis

669

Amino Acids

73.43

Weight (kDa)

5.95

Isoelectric Point (pI)

60.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2-Hacid_dh_C PF02826 130 - 340 8.3e-25 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 927
AccB1I GGYRCC 1 cut(s) 498
AccBSI CCGCTC 2 cut(s) 609, 647
AccII CGCG 6 cut(s) 227, 240, 245, 363, 365, 433
AclWI GGATC 5 cut(s) 18, 31, 197, 1727, 1740
AcoI YGGCCR 2 cut(s) 177, 1962
AcsI RAATTY 2 cut(s) 1312, 1835
AcuI CTGAAG 3 cut(s) 894, 1239, 1527
AcvI CACGTG 1 cut(s) 349
AcyI GRCGYC 1 cut(s) 141
AfaI GTAC 2 cut(s) 230, 1429
AfiI CCNNNNNNNGG 9 cut(s) 186, 304, 330, 367, 508, 942, 973, 1491, 1971
AflIII ACRYGT 1 cut(s) 157
AgsI TTSAA 3 cut(s) 574, 1317, 1615
AjiI CACGTC 1 cut(s) 160
AjnI CCWGG 2 cut(s) 766, 1600
Alw21I GWGCWC 2 cut(s) 8, 588
Alw26I GTCTC 1 cut(s) 552
AlwI GGATC 5 cut(s) 18, 31, 197, 1727, 1740
Ama87I CYCGRG 2 cut(s) 329, 1513
AoxI GGCC 5 cut(s) 177, 567, 878, 1651, 1962
ApeKI GCWGC 5 cut(s) 247, 256, 680, 1435, 1796
ApoI RAATTY 2 cut(s) 1312, 1835
Asp700I GAANNNNTTC 1 cut(s) 726
AspLEI GCGC 6 cut(s) 242, 247, 365, 394, 435, 928
AspS9I GGNCC 2 cut(s) 878, 1652
AsuC2I CCSGG 4 cut(s) 299, 454, 485, 503
AsuHPI GGTGA 3 cut(s) 616, 1157, 1616
AsuNHI GCTAGC 2 cut(s) 676, 1195
AvaI CYCGRG 2 cut(s) 329, 1513
BalI TGGCCA 1 cut(s) 1964
BamHI GGATCC 2 cut(s) 23, 1732
BanI GGYRCC 1 cut(s) 498
BanII GRGCYC 1 cut(s) 336
BarI GAAGNNNNNNTAC 2 cut(s) 1756, 1788
BbrPI CACGTG 1 cut(s) 349
BbsI GAAGAC 4 cut(s) 1272, 1342, 1515, 1652
Bbv12I GWGCWC 2 cut(s) 8, 588
BbvI GCAGC 5 cut(s) 243, 259, 667, 1447, 1783
BceAI ACGGC 6 cut(s) 55, 134, 191, 199, 1184, 1540
BciT130I CCWGG 2 cut(s) 768, 1602
BciVI GTATCC 2 cut(s) 652, 1765
BcnI CCSGG 4 cut(s) 299, 454, 485, 503
BcoDI GTCTC 1 cut(s) 552
BfaI CTAG 8 cut(s) 401, 558, 677, 1196, 1284, 1415, 1578, 1703
BfmI CTRYAG 6 cut(s) 752, 1190, 1533, 1814, 1918, 1968
BfoI RGCGCY 1 cut(s) 395
BfuI GTATCC 2 cut(s) 652, 1765
BglI GCCNNNNNGGC 1 cut(s) 138
BglII AGATCT 2 cut(s) 530, 623
Bme1390I CCNGG 6 cut(s) 299, 454, 485, 503, 768, 1602
BmeT110I CYCGRG 2 cut(s) 329, 1513
BmgBI CACGTC 1 cut(s) 160
BmgT120I GGNCC 2 cut(s) 878, 1652
BmiI GGNNCC 6 cut(s) 25, 335, 500, 1654, 1700, 1734
BmrFI CCNGG 6 cut(s) 299, 454, 485, 503, 768, 1602
BmrI ACTGGG 1 cut(s) 1650
BmsI GCATC 4 cut(s) 27, 111, 978, 1959
BmtI GCTAGC 2 cut(s) 680, 1199
BmuI ACTGGG 1 cut(s) 1650
BpiI GAAGAC 4 cut(s) 1272, 1342, 1515, 1652
BplI GAGNNNNNCTC 2 cut(s) 185, 217
BpmI CTGGAG 3 cut(s) 789, 1064, 1193
BpuMI CCSGG 4 cut(s) 299, 454, 485, 503
BsaAI YACGTR 1 cut(s) 349
BsaHI GRCGYC 1 cut(s) 141
BsaI GGTCTC 1 cut(s) 552
BsaJI CCNNGG 7 cut(s) 117, 150, 283, 328, 484, 502, 1272
BsaWI WCCGGW 1 cut(s) 1484
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bsc4I CCNNNNNNNGG 9 cut(s) 186, 304, 330, 367, 508, 942, 973, 1491, 1971
Bse118I RCCGGY 1 cut(s) 14
Bse1I ACTGG 3 cut(s) 1176, 1656, 1935
Bse3DI GCAATG 1 cut(s) 890
BseBI CCWGG 2 cut(s) 768, 1602
BseDI CCNNGG 7 cut(s) 117, 150, 283, 328, 484, 502, 1272
BseLI CCNNNNNNNGG 9 cut(s) 186, 304, 330, 367, 508, 942, 973, 1491, 1971
BseMI GCAATG 1 cut(s) 890
BseMII CTCAG 4 cut(s) 181, 1403, 1580, 1757
BseNI ACTGG 3 cut(s) 1176, 1656, 1935
BseRI GAGGAG 2 cut(s) 383, 427
BseXI GCAGC 5 cut(s) 243, 259, 667, 1447, 1783
BseYI CCCAGC 1 cut(s) 851
BsgI GTGCAG 1 cut(s) 1038
Bsh1236I CGCG 6 cut(s) 227, 240, 245, 363, 365, 433
BshFI GGCC 5 cut(s) 179, 569, 880, 1653, 1964
BshNI GGYRCC 1 cut(s) 498
BsiHKAI GWGCWC 2 cut(s) 8, 588
BsiHKCI CYCGRG 2 cut(s) 329, 1513
BsiSI CCGG 8 cut(s) 15, 138, 298, 337, 453, 484, 502, 1485
BslFI GGGAC 2 cut(s) 25, 146
BslI CCNNNNNNNGG 9 cut(s) 186, 304, 330, 367, 508, 942, 973, 1491, 1971
BsmAI GTCTC 1 cut(s) 552
BsmFI GGGAC 2 cut(s) 25, 146
BsmI GAATGC 2 cut(s) 752, 773
BsnI GGCC 5 cut(s) 179, 569, 880, 1653, 1964
Bso31I GGTCTC 1 cut(s) 552
BsoBI CYCGRG 2 cut(s) 329, 1513
Bsp1286I GDGCHC 3 cut(s) 8, 336, 588
Bsp19I CCATGG 1 cut(s) 117
BspANI GGCC 5 cut(s) 179, 569, 880, 1653, 1964
BspCNI CTCAG 4 cut(s) 180, 1402, 1581, 1756
BspFNI CGCG 6 cut(s) 227, 240, 245, 363, 365, 433
BspLI GGNNCC 6 cut(s) 25, 335, 500, 1654, 1700, 1734
BspMAI CTGCAG 1 cut(s) 1818
BspOI GCTAGC 2 cut(s) 680, 1199
BspPI GGATC 5 cut(s) 18, 31, 197, 1727, 1740
BspT107I GGYRCC 1 cut(s) 498
BspTNI GGTCTC 1 cut(s) 552
BsrBI CCGCTC 2 cut(s) 609, 647
BsrDI GCAATG 1 cut(s) 890
BsrFI RCCGGY 1 cut(s) 14
BsrI ACTGG 3 cut(s) 1176, 1656, 1935
BssAI RCCGGY 1 cut(s) 14
BssECI CCNNGG 7 cut(s) 117, 150, 283, 328, 484, 502, 1272
BssNI GRCGYC 1 cut(s) 141
BssT1I CCWWGG 3 cut(s) 117, 283, 1272
Bst2UI CCWGG 2 cut(s) 768, 1602
Bst4CI ACNGT 6 cut(s) 385, 727, 1016, 1856, 1919, 1969
BstACI GRCGYC 1 cut(s) 141
BstBAI YACGTR 1 cut(s) 349
BstC8I GCNNGC 6 cut(s) 16, 584, 678, 1197, 1289, 1997
BstDEI CTNAG 4 cut(s) 167, 1389, 1589, 1743
BstDSI CCRYGG 2 cut(s) 117, 150
BstFNI CGCG 6 cut(s) 227, 240, 245, 363, 365, 433
BstH2I RGCGCY 1 cut(s) 395
BstHHI GCGC 6 cut(s) 242, 247, 365, 394, 435, 928
BstMAI GTCTC 1 cut(s) 552
BstNI CCWGG 2 cut(s) 768, 1602
BstNSI RCATGY 1 cut(s) 761
BstSCI CCNGG 6 cut(s) 297, 452, 483, 501, 766, 1600
BstSFI CTRYAG 6 cut(s) 752, 1190, 1533, 1814, 1918, 1968
BstUI CGCG 6 cut(s) 227, 240, 245, 363, 365, 433
BstV1I GCAGC 5 cut(s) 243, 259, 667, 1447, 1783
BstV2I GAAGAC 4 cut(s) 1272, 1342, 1515, 1652
BstX2I RGATCY 4 cut(s) 23, 530, 623, 1732
BstYI RGATCY 4 cut(s) 23, 530, 623, 1732
BsuI GTATCC 2 cut(s) 652, 1765
BsuRI GGCC 5 cut(s) 179, 569, 880, 1653, 1964
BtgI CCRYGG 2 cut(s) 117, 150
BtrI CACGTC 1 cut(s) 160
BtsIMutI CAGTG 3 cut(s) 1021, 1928, 1965
Cac8I GCNNGC 6 cut(s) 16, 584, 678, 1197, 1289, 1997
CfoI GCGC 6 cut(s) 242, 247, 365, 394, 435, 928
Cfr10I RCCGGY 1 cut(s) 14
Cfr13I GGNCC 2 cut(s) 878, 1652
CseI GACGC 4 cut(s) 130, 239, 248, 427
Csp6I GTAC 2 cut(s) 229, 1428
CviAII CATG 6 cut(s) 118, 758, 897, 1229, 1664, 1711
CviQI GTAC 2 cut(s) 229, 1428
DdeI CTNAG 4 cut(s) 167, 1389, 1589, 1743
EaeI YGGCCR 2 cut(s) 177, 1962
EciI GGCGGA 2 cut(s) 187, 193
Eco130I CCWWGG 3 cut(s) 117, 283, 1272
Eco24I GRGCYC 1 cut(s) 336
Eco31I GGTCTC 1 cut(s) 552
Eco57I CTGAAG 3 cut(s) 894, 1239, 1527
Eco72I CACGTG 1 cut(s) 349
Eco88I CYCGRG 2 cut(s) 329, 1513
EcoRII CCWGG 2 cut(s) 766, 1600
EcoT14I CCWWGG 3 cut(s) 117, 283, 1272
EcoT38I GRGCYC 1 cut(s) 336
ErhI CCWWGG 3 cut(s) 117, 283, 1272
FaeI CATG 6 cut(s) 121, 761, 900, 1232, 1667, 1714
FalI AAGNNNNNCTT 2 cut(s) 951, 983
FaqI GGGAC 2 cut(s) 25, 146
FatI CATG 6 cut(s) 117, 757, 896, 1228, 1663, 1710
FauI CCCGC 2 cut(s) 37, 368
FauNDI CATATG 1 cut(s) 930
FriOI GRGCYC 1 cut(s) 336
FspAI RTGCGCAY 1 cut(s) 927
FspBI CTAG 8 cut(s) 401, 558, 677, 1196, 1284, 1415, 1578, 1703
FspI TGCGCA 1 cut(s) 927
GlaI GCGC 6 cut(s) 241, 246, 364, 393, 434, 927
GsaI CCCAGC 1 cut(s) 855
GsuI CTGGAG 3 cut(s) 789, 1064, 1193
HaeII RGCGCY 1 cut(s) 395
HaeIII GGCC 5 cut(s) 179, 569, 880, 1653, 1964
HapII CCGG 8 cut(s) 15, 138, 298, 337, 453, 484, 502, 1485
HgaI GACGC 4 cut(s) 130, 239, 248, 427
HhaI GCGC 6 cut(s) 242, 247, 365, 394, 435, 928
Hin1I GRCGYC 1 cut(s) 141
Hin1II CATG 6 cut(s) 121, 761, 900, 1232, 1667, 1714
Hin6I GCGC 6 cut(s) 240, 245, 363, 392, 433, 926
HinP1I GCGC 6 cut(s) 240, 245, 363, 392, 433, 926
HincII GTYRAC 1 cut(s) 1915
HindII GTYRAC 1 cut(s) 1915
HinfI GANTC 9 cut(s) 194, 308, 439, 733, 1277, 1511, 1538, 1550, 1957
HpaI GTTAAC 1 cut(s) 1915
HpaII CCGG 8 cut(s) 15, 138, 298, 337, 453, 484, 502, 1485
HphI GGTGA 3 cut(s) 616, 1157, 1616
Hpy166II GTNNAC 5 cut(s) 346, 352, 784, 908, 1915
Hpy188III TCNNGA 6 cut(s) 574, 1238, 1515, 1578, 1895, 1954
Hpy8I GTNNAC 5 cut(s) 346, 352, 784, 908, 1915
Hpy99I CGWCG 6 cut(s) 76, 89, 110, 146, 185, 255
HpyAV CCTTC 5 cut(s) 580, 648, 869, 1609, 1880
HpyCH4III ACNGT 6 cut(s) 385, 727, 1016, 1856, 1919, 1969
HpyCH4IV ACGT 2 cut(s) 159, 348
HpyCH4V TGCA 7 cut(s) 102, 1019, 1075, 1232, 1546, 1643, 1816
HpyF3I CTNAG 4 cut(s) 167, 1389, 1589, 1743
HpySE526I ACGT 2 cut(s) 159, 348
Hsp92I GRCGYC 1 cut(s) 141
Hsp92II CATG 6 cut(s) 121, 761, 900, 1232, 1667, 1714
HspAI GCGC 6 cut(s) 240, 245, 363, 392, 433, 926
KroI GCCGGC 1 cut(s) 14
KroNI GCCGGC 1 cut(s) 16
KspAI GTTAAC 1 cut(s) 1915
LmnI GCTCC 7 cut(s) 81, 121, 339, 561, 770, 1174, 1250
Lsp1109I GCAGC 5 cut(s) 243, 259, 667, 1447, 1783
LweI GCATC 4 cut(s) 27, 111, 978, 1959
MaeI CTAG 8 cut(s) 401, 558, 677, 1196, 1284, 1415, 1578, 1703
MaeII ACGT 2 cut(s) 159, 348
MaeIII GTNAC 6 cut(s) 88, 712, 1720, 1809, 1850, 1987
MbiI CCGCTC 2 cut(s) 609, 647
MfeI CAATTG 1 cut(s) 1776
MflI RGATCY 4 cut(s) 23, 530, 623, 1732
MhlI GDGCHC 3 cut(s) 8, 336, 588
MlsI TGGCCA 1 cut(s) 1964
MluCI AATT 6 cut(s) 1211, 1312, 1317, 1607, 1776, 1835
MluNI TGGCCA 1 cut(s) 1964
MlyI GAGTC 4 cut(s) 203, 433, 1286, 1505
MmeI TCCRAC 3 cut(s) 786, 1856, 1863
Mox20I TGGCCA 1 cut(s) 1964
MroNI GCCGGC 1 cut(s) 14
MroXI GAANNNNTTC 1 cut(s) 726
MscI TGGCCA 1 cut(s) 1964
MseI TTAA 6 cut(s) 914, 939, 1214, 1478, 1683, 1914
Msp20I TGGCCA 1 cut(s) 1964
MspA1I CMGCKG 1 cut(s) 802
MspI CCGG 8 cut(s) 15, 138, 298, 337, 453, 484, 502, 1485
MspR9I CCNGG 6 cut(s) 299, 454, 485, 503, 768, 1602
MteI GCGCNGCGC 1 cut(s) 243
MunI CAATTG 1 cut(s) 1776
Mva1269I GAATGC 2 cut(s) 752, 773
MvaI CCWGG 2 cut(s) 768, 1602
MvnI CGCG 6 cut(s) 227, 240, 245, 363, 365, 433
NaeI GCCGGC 1 cut(s) 16
NciI CCSGG 4 cut(s) 299, 454, 485, 503
NcoI CCATGG 1 cut(s) 117
NdeI CATATG 1 cut(s) 930
NgoMIV GCCGGC 1 cut(s) 14
NheI GCTAGC 2 cut(s) 676, 1195
NlaIII CATG 6 cut(s) 121, 761, 900, 1232, 1667, 1714
NlaIV GGNNCC 6 cut(s) 25, 335, 500, 1654, 1700, 1734
NmuCI GTSAC 3 cut(s) 88, 712, 1850
NsbI TGCGCA 1 cut(s) 927
NspI RCATGY 1 cut(s) 761
PaeR7I CTCGAG 1 cut(s) 1513
PcsI WCGNNNNNNNCGW 1 cut(s) 189
PctI GAATGC 2 cut(s) 752, 773
PdiI GCCGGC 1 cut(s) 16
PdmI GAANNNNTTC 1 cut(s) 726
PfeI GAWTC 5 cut(s) 308, 733, 1538, 1550, 1957
PleI GAGTC 4 cut(s) 202, 433, 1285, 1505
PmaCI CACGTG 1 cut(s) 349
PmlI CACGTG 1 cut(s) 349
PpsI GAGTC 4 cut(s) 202, 433, 1285, 1505
Ppu21I YACGTR 1 cut(s) 349
Psp6I CCWGG 2 cut(s) 766, 1600
PspCI CACGTG 1 cut(s) 349
PspFI CCCAGC 1 cut(s) 851
PspGI CCWGG 2 cut(s) 766, 1600
PspN4I GGNNCC 6 cut(s) 25, 335, 500, 1654, 1700, 1734
PspPI GGNCC 2 cut(s) 878, 1652
PstI CTGCAG 1 cut(s) 1818
PsuI RGATCY 4 cut(s) 23, 530, 623, 1732
PvuII CAGCTG 1 cut(s) 802
RsaI GTAC 2 cut(s) 230, 1429
RsaNI GTAC 2 cut(s) 229, 1428
SaqAI TTAA 6 cut(s) 914, 939, 1214, 1478, 1683, 1914
Sau96I GGNCC 2 cut(s) 878, 1652
SchI GAGTC 4 cut(s) 203, 433, 1286, 1505
ScrFI CCNGG 6 cut(s) 299, 454, 485, 503, 768, 1602
SduI GDGCHC 3 cut(s) 8, 336, 588
SfaNI GCATC 4 cut(s) 27, 111, 978, 1959
SfcI CTRYAG 6 cut(s) 752, 1190, 1533, 1814, 1918, 1968
Sfr274I CTCGAG 1 cut(s) 1513
SlaI CTCGAG 1 cut(s) 1513
SmlI CTYRAG 1 cut(s) 1513
SmoI CTYRAG 1 cut(s) 1513
Sse9I AATT 6 cut(s) 1211, 1312, 1317, 1607, 1776, 1835
SspMI CTAG 8 cut(s) 401, 558, 677, 1196, 1284, 1415, 1578, 1703
StyD4I CCNGG 6 cut(s) 297, 452, 483, 501, 766, 1600
StyI CCWWGG 3 cut(s) 117, 283, 1272
TaaI ACNGT 6 cut(s) 385, 727, 1016, 1856, 1919, 1969
TaiI ACGT 2 cut(s) 162, 351
TaqI TCGA 6 cut(s) 105, 192, 649, 1089, 1514, 1953
TaqII GACCGA 1 cut(s) 1314
TasI AATT 6 cut(s) 1211, 1312, 1317, 1607, 1776, 1835
TfiI GAWTC 5 cut(s) 308, 733, 1538, 1550, 1957
Tru1I TTAA 6 cut(s) 914, 939, 1214, 1478, 1683, 1914
Tru9I TTAA 6 cut(s) 914, 939, 1214, 1478, 1683, 1914
TscAI CASTG 3 cut(s) 1021, 1935, 1972
TseFI GTSAC 3 cut(s) 88, 712, 1850
TseI GCWGC 5 cut(s) 247, 256, 680, 1435, 1796
Tsp45I GTSAC 3 cut(s) 88, 712, 1850
TspDTI ATGAA 6 cut(s) 692, 735, 1164, 1170, 1419, 1652
TspGWI ACGGA 2 cut(s) 252, 320
TspRI CASTG 3 cut(s) 1021, 1935, 1972
XapI RAATTY 2 cut(s) 1312, 1835
XbaI TCTAGA 1 cut(s) 1577
XceI RCATGY 1 cut(s) 761
XcmI CCANNNNNNNNNTGG 1 cut(s) 1663
XhoI CTCGAG 1 cut(s) 1513
XmnI GAANNNNTTC 1 cut(s) 726
XspI CTAG 8 cut(s) 401, 558, 677, 1196, 1284, 1415, 1578, 1703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.