Rh1CG254800

C-terminal binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0001355
Physical Location & Seq
Forward (+)
51890228 .. 51940761
50534 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG254800.1

Sequence Viewer

Length: 1923 bp
ATGAGCAGCGCCGGCATCGGATCCCCCGCCACAATGTCCCACCGCACCACCCAAACGACGTCGTCGCTCCCCCTCGTCGTCACTCTCAACTGCATCGACGACTTCGCCATGGAGCAAGACTGCTTGTCCGGCGTCGCCGCCGTCGAGCACGTCCCTCTCAGCCGCCTGGCCGACGGCAGGATCGAGTCCGCCTCCGCTGTGCTCCTCCAGTCCCTCGCGTACCTCCCACGCGCCGCCCAGCGTCGGCTGCGTCCTTACCAGCTCATCCTCTGCCTTGGGTCTGCTGACCGCGCCACCGACTCCGCTCTCGCCGCCGACCTCGGGCTCCGGCTCGTCCACGTGGACGCCTCCCGCGCCGAGGAGATCGCCGATACGGTTATGGCGCTGTTTCTAGGGTTGCTGAGGAGGACGCACTTGCTCTCGCGCCAAACGCTTTCGGCTTCCGGGTGGCTTGGTTCGGTTCAGCCGCTTTGCCGTGGGATGAGGCGGTGCCGGGGCTTGGTTTTGGGGATTATTGGTAGATCTGCGGCGGCGAGGTCTCTGGCTACTAGGAGCTTGGCCTTCAAGATCAGTGTGCTGTATTTCGATGTAGAGGTGAATGGAAAAGTGAGTAGGTCATATGGCTTTCCCTCTGCTGCCCGAAAGATGGATACTCTAAATGACTTACTTGCTGCGAGTGACCTCATTTCGCTTCATTGTGCTCTGACAAATGAAACAATTCAGATTCTGAATGCTGAATGTTTACAGCACGTAAAGCCTGGAGCATTTCTTGTAAACACGGGTAGCAGTCAACTGTTGGATGATTGTTTTGTGAAACAGCTTTTGATTGATGGAACTTTAGCTGGGTGTGCTTTGGATGGTGCTGAAGGGCCGCAATGGATGGAAGCATGGGTAAAGGAGATGCCCAATGTGTTGATACTTCCGCACAGTGCAGATTATAGTGAAGAAGTATGGCTGGAGATAAGGGAGAAAGCAATATCCGTATTGCAGACATTCTTCTTTGATGGGGTTGTTCCAAAAAATGTTGTATCTGATGAGGATGAGGAGGAAAGTGAAATAGGGGATGAAAATGAACACTCTGATAAACTGGAGCAAGAAAATCCCTTACAGCTAACCCTTGTTCAGCAATTAACTGATGTTAGTCATGCAAGTCCAGAAAGCTCCCTGAATAAAGAAACCAATCAATCCAAGGAGTCTCCTAGCCAGCAAGGTTCGGGTTTGTCTCAAAATTCAACTACTCGGTCTGAGGGAAGACGAAGTAGATCAGGTAAGAAAGCCAAAAAGAGGCACACACATCAGAAATCCCAGAAGAAATCAGATGAACCTTCACTAGCAAAAGAAAGTACCTCACAGCGGGAGGAAGATACGACTATGAGTGGCACAGATCAAGCATTAAGTTCCAGTTCTCGGTTTGCTTCCCCCGAAGACTCAAGAAGTAGGAAAACACCTATAGAATCAATGCAAGAGTCGCCTTCCGACCAGCTTCTAAAATCTAGAAAGAGGCTGAGTGGAAAGCCTGGTGAACTGTTAAAGGACGGCTATGTTGTAGCTCTATATGCAAGAGATAGCCCCGGTCTTCATGTCGCAAGGCAAAGAGTTAAAGGTGGTGGTTGGTTCCTAGATACCATGTCAAATGTAACGAAAAGAGATCCTGCAGCTCAGTTCCTCATTGTAATCAGAAGCAAGGATACCATTGGTTTGCGATCTTTTGCTGCTGGTGGAAAGTTATTGCAGATTAATAGAAGAATGGAATTTGTATTCGCAAGTCACAGTTTTGATGTTTGGGAGAGTTGGATGTTGGAAGGTTCTCTGGACGAGTGTAGGCTGGTTAACTGTAGAAATCCGCTGGCTGTTTTGGATGTAAGCATCGAGATACTGGCCACTGTAGGCGAAGATGATGGGGTAACACGCTGGCTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008360 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010482 GO:0010494 GO:0010769 GO:0012505 GO:0016043 GO:0016049 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030856 GO:0031128 GO:0031129 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0040007 GO:0042802 GO:0042803 GO:0042814 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0046983 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048468 GO:0048530 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051302 GO:0060284 GO:0060560 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071826 GO:0071840 GO:0090558 GO:0090567 GO:0090626 GO:0090696 GO:0090697 GO:0090698 GO:0098791 GO:0099402 GO:1905392 GO:1990904 GO:2000024 GO:2000026 GO:2000039
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2-Hacid_dh_C

Protein Analysis

640

Amino Acids

70.09

Weight (kDa)

5.9

Isoelectric Point (pI)

61.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2-Hacid_dh_C PF02826 127 - 311 1.8e-27 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 62
AccB1I GGYRCC 1 cut(s) 489
AccBSI CCGCTC 1 cut(s) 305
AccII CGCG 5 cut(s) 218, 231, 291, 354, 424
AclWI GGATC 4 cut(s) 15, 28, 188, 1643
AcoI YGGCCR 2 cut(s) 168, 1878
AcsI RAATTY 2 cut(s) 1228, 1751
AcuI CTGAAG 1 cut(s) 885
AcvI CACGTG 1 cut(s) 340
AcyI GRCGYC 3 cut(s) 59, 132, 345
AfaI GTAC 2 cut(s) 221, 1345
AfiI CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1284, 1353, 1407
AgsI TTSAA 2 cut(s) 565, 1233
AhdI GACNNNNNGTC 1 cut(s) 124
AjiI CACGTC 1 cut(s) 151
AjnI CCWGG 3 cut(s) 165, 757, 1516
AluBI AGCT 9 cut(s) 262, 555, 820, 842, 1111, 1161, 1483, 1550, 1658
AluI AGCT 9 cut(s) 262, 555, 820, 842, 1111, 1161, 1483, 1550, 1658
Alw21I GWGCWC 3 cut(s) 150, 204, 703
Alw26I GTCTC 3 cut(s) 543, 1200, 1227
AlwI GGATC 4 cut(s) 15, 28, 188, 1643
AlwNI CAGNNNCTG 1 cut(s) 727
Ama87I CYCGRG 1 cut(s) 320
AoxI GGCC 4 cut(s) 168, 558, 869, 1878
ApeKI GCWGC 6 cut(s) 6, 247, 635, 671, 1655, 1712
ApoI RAATTY 2 cut(s) 1228, 1751
AseI ATTAAT 1 cut(s) 1737
Asp700I GAANNNNTTC 1 cut(s) 717
AspLEI GCGC 6 cut(s) 11, 233, 293, 356, 385, 426
AspS9I GGNCC 1 cut(s) 869
AsuC2I CCSGG 3 cut(s) 445, 494, 1572
AsuHPI GGTGA 2 cut(s) 607, 1532
AvaI CYCGRG 1 cut(s) 320
BalI TGGCCA 1 cut(s) 1880
BamHI GGATCC 1 cut(s) 20
BanI GGYRCC 1 cut(s) 489
BanII GRGCYC 1 cut(s) 327
BarI GAAGNNNNNNTAC 2 cut(s) 1672, 1704
BbrPI CACGTG 1 cut(s) 340
BbsI GAAGAC 3 cut(s) 1258, 1431, 1568
Bbv12I GWGCWC 3 cut(s) 150, 204, 703
BbvCI CCTCAGC 1 cut(s) 401
BbvI GCAGC 6 cut(s) 18, 234, 622, 658, 1667, 1699
BccI CCATC 6 cut(s) 640, 824, 851, 874, 998, 1892
BceAI ACGGC 4 cut(s) 125, 190, 459, 1552
BciT130I CCWGG 3 cut(s) 167, 759, 1518
BciVI GTATCC 2 cut(s) 643, 1681
BcnI CCSGG 3 cut(s) 445, 494, 1572
BcoDI GTCTC 3 cut(s) 543, 1200, 1227
BfaI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
BfmI CTRYAG 4 cut(s) 1449, 1653, 1834, 1884
BfoI RGCGCY 2 cut(s) 12, 386
BfuI GTATCC 2 cut(s) 643, 1681
BglII AGATCT 1 cut(s) 521
Bme1390I CCNGG 6 cut(s) 167, 445, 494, 759, 1518, 1572
BmeRI GACNNNNNGTC 1 cut(s) 124
BmeT110I CYCGRG 1 cut(s) 320
BmgBI CACGTC 1 cut(s) 151
BmgT120I GGNCC 1 cut(s) 869
BmiI GGNNCC 4 cut(s) 22, 326, 491, 1616
BmrFI CCNGG 6 cut(s) 167, 445, 494, 759, 1518, 1572
BmsI GCATC 4 cut(s) 24, 102, 891, 1875
BpiI GAAGAC 3 cut(s) 1258, 1431, 1568
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 4 cut(s) 191, 780, 977, 1109
Bpu10I CCTNAGC 1 cut(s) 401
BpuEI CTTGAG 1 cut(s) 1414
BpuMI CCSGG 3 cut(s) 445, 494, 1572
BsaAI YACGTR 2 cut(s) 340, 751
BsaHI GRCGYC 3 cut(s) 59, 132, 345
BsaI GGTCTC 1 cut(s) 543
BsaJI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1188, 1570
Bsc4I CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1284, 1353, 1407
Bse118I RCCGGY 1 cut(s) 11
Bse1I ACTGG 4 cut(s) 208, 1092, 1401, 1881
Bse3DI GCAATG 1 cut(s) 881
BseBI CCWGG 3 cut(s) 167, 759, 1518
BseDI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1188, 1570
BseGI GGATG 9 cut(s) 264, 486, 805, 862, 885, 1045, 1069, 1800, 1864
BseLI CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1284, 1353, 1407
BseMI GCAATG 1 cut(s) 881
BseMII CTCAG 5 cut(s) 172, 392, 1236, 1496, 1673
BseNI ACTGG 4 cut(s) 208, 1092, 1401, 1881
BseRI GAGGAG 4 cut(s) 194, 374, 418, 1058
BseXI GCAGC 6 cut(s) 18, 234, 622, 658, 1667, 1699
BseYI CCCAGC 2 cut(s) 237, 842
BsgI GTGCAG 1 cut(s) 951
Bsh1236I CGCG 5 cut(s) 218, 231, 291, 354, 424
BshFI GGCC 4 cut(s) 170, 560, 871, 1880
BshNI GGYRCC 1 cut(s) 489
BsiHKAI GWGCWC 3 cut(s) 150, 204, 703
BsiHKCI CYCGRG 1 cut(s) 320
BsiSI CCGG 6 cut(s) 12, 129, 328, 444, 493, 1572
BslFI GGGAC 3 cut(s) 22, 137, 196
BslI CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1284, 1353, 1407
BsmAI GTCTC 3 cut(s) 543, 1200, 1227
BsmFI GGGAC 3 cut(s) 22, 137, 196
BsmI GAATGC 1 cut(s) 736
BsnI GGCC 4 cut(s) 170, 560, 871, 1880
Bso31I GGTCTC 1 cut(s) 543
BsoBI CYCGRG 1 cut(s) 320
Bsp1286I GDGCHC 4 cut(s) 150, 204, 327, 703
Bsp143I GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
Bsp19I CCATGG 1 cut(s) 108
BspANI GGCC 4 cut(s) 170, 560, 871, 1880
BspCNI CTCAG 5 cut(s) 171, 393, 1237, 1497, 1672
BspFNI CGCG 5 cut(s) 218, 231, 291, 354, 424
BspLI GGNNCC 4 cut(s) 22, 326, 491, 1616
BspMAI CTGCAG 1 cut(s) 1657
BspPI GGATC 4 cut(s) 15, 28, 188, 1643
BspT107I GGYRCC 1 cut(s) 489
BspTNI GGTCTC 1 cut(s) 543
BsrBI CCGCTC 1 cut(s) 305
BsrDI GCAATG 1 cut(s) 881
BsrFI RCCGGY 1 cut(s) 11
BsrI ACTGG 4 cut(s) 208, 1092, 1401, 1881
BssAI RCCGGY 1 cut(s) 11
BssECI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1188, 1570
BssMI GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
BssNI GRCGYC 3 cut(s) 59, 132, 345
BssT1I CCWWGG 3 cut(s) 108, 274, 1188
Bst2UI CCWGG 3 cut(s) 167, 759, 1518
Bst4CI ACNGT 7 cut(s) 376, 795, 929, 1527, 1772, 1835, 1885
BstACI GRCGYC 3 cut(s) 59, 132, 345
BstBAI YACGTR 2 cut(s) 340, 751
BstC8I GCNNGC 4 cut(s) 13, 1205, 1848, 1913
BstDEI CTNAG 5 cut(s) 158, 401, 1245, 1505, 1659
BstDSI CCRYGG 2 cut(s) 108, 475
BstF5I GGATG 9 cut(s) 264, 486, 805, 862, 885, 1045, 1069, 1800, 1864
BstFNI CGCG 5 cut(s) 218, 231, 291, 354, 424
BstH2I RGCGCY 2 cut(s) 12, 386
BstHHI GCGC 6 cut(s) 11, 233, 293, 356, 385, 426
BstKTI GATC 9 cut(s) 23, 183, 366, 524, 570, 1265, 1387, 1651, 1706
BstMAI GTCTC 3 cut(s) 543, 1200, 1227
BstMBI GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
BstNI CCWGG 3 cut(s) 167, 759, 1518
BstSCI CCNGG 6 cut(s) 165, 443, 492, 757, 1516, 1570
BstSFI CTRYAG 4 cut(s) 1449, 1653, 1834, 1884
BstUI CGCG 5 cut(s) 218, 231, 291, 354, 424
BstV1I GCAGC 6 cut(s) 18, 234, 622, 658, 1667, 1699
BstV2I GAAGAC 3 cut(s) 1258, 1431, 1568
BstX2I RGATCY 3 cut(s) 20, 521, 1648
BstYI RGATCY 3 cut(s) 20, 521, 1648
BsuI GTATCC 2 cut(s) 643, 1681
BsuRI GGCC 4 cut(s) 170, 560, 871, 1880
BtgI CCRYGG 2 cut(s) 108, 475
BtrI CACGTC 1 cut(s) 151
BtsCI GGATG 9 cut(s) 264, 486, 805, 862, 885, 1045, 1069, 1800, 1864
BtsIMutI CAGTG 3 cut(s) 577, 934, 1881
Cac8I GCNNGC 4 cut(s) 13, 1205, 1848, 1913
CaiI CAGNNNCTG 1 cut(s) 727
CfoI GCGC 6 cut(s) 11, 233, 293, 356, 385, 426
Cfr10I RCCGGY 1 cut(s) 11
Cfr13I GGNCC 1 cut(s) 869
CseI GACGC 5 cut(s) 121, 230, 239, 353, 418
Csp6I GTAC 2 cut(s) 220, 1344
CviAII CATG 5 cut(s) 109, 888, 1145, 1580, 1627
CviQI GTAC 2 cut(s) 220, 1344
DdeI CTNAG 5 cut(s) 158, 401, 1245, 1505, 1659
DpnI GATC 9 cut(s) 22, 182, 365, 523, 569, 1264, 1386, 1650, 1705
DpnII GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
DriI GACNNNNNGTC 1 cut(s) 124
EaeI YGGCCR 2 cut(s) 168, 1878
Eam1105I GACNNNNNGTC 1 cut(s) 124
EciI GGCGGA 1 cut(s) 178
Eco130I CCWWGG 3 cut(s) 108, 274, 1188
Eco24I GRGCYC 1 cut(s) 327
Eco31I GGTCTC 1 cut(s) 543
Eco57I CTGAAG 1 cut(s) 885
Eco72I CACGTG 1 cut(s) 340
Eco88I CYCGRG 1 cut(s) 320
EcoRII CCWGG 3 cut(s) 165, 757, 1516
EcoT14I CCWWGG 3 cut(s) 108, 274, 1188
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 3 cut(s) 108, 274, 1188
FaeI CATG 5 cut(s) 112, 891, 1148, 1583, 1630
FaqI GGGAC 3 cut(s) 22, 137, 196
FatI CATG 5 cut(s) 108, 887, 1144, 1579, 1626
FauI CCCGC 3 cut(s) 34, 359, 1347
FauNDI CATATG 1 cut(s) 619
FokI GGATG 9 cut(s) 251, 493, 812, 869, 892, 1052, 1076, 1807, 1871
FriOI GRGCYC 1 cut(s) 327
FspBI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
GlaI GCGC 6 cut(s) 10, 232, 292, 355, 384, 425
GsaI CCCAGC 2 cut(s) 241, 846
GsuI CTGGAG 4 cut(s) 191, 780, 977, 1109
HaeII RGCGCY 2 cut(s) 12, 386
HaeIII GGCC 4 cut(s) 170, 560, 871, 1880
HapII CCGG 6 cut(s) 12, 129, 328, 444, 493, 1572
HgaI GACGC 5 cut(s) 121, 230, 239, 353, 418
HhaI GCGC 6 cut(s) 11, 233, 293, 356, 385, 426
Hin1I GRCGYC 3 cut(s) 59, 132, 345
Hin1II CATG 5 cut(s) 112, 891, 1148, 1583, 1630
Hin6I GCGC 6 cut(s) 9, 231, 291, 354, 383, 424
HinP1I GCGC 6 cut(s) 9, 231, 291, 354, 383, 424
HincII GTYRAC 2 cut(s) 791, 1831
HindII GTYRAC 2 cut(s) 791, 1831
HinfI GANTC 7 cut(s) 185, 299, 724, 1193, 1427, 1454, 1466
HpaI GTTAAC 1 cut(s) 1831
HpaII CCGG 6 cut(s) 12, 129, 328, 444, 493, 1572
HphI GGTGA 2 cut(s) 607, 1532
Hpy166II GTNNAC 7 cut(s) 337, 343, 743, 775, 791, 1523, 1831
Hpy188III TCNNGA 6 cut(s) 565, 1154, 1431, 1494, 1811, 1870
Hpy8I GTNNAC 7 cut(s) 337, 343, 743, 775, 791, 1523, 1831
Hpy99I CGWCG 9 cut(s) 61, 64, 67, 80, 101, 137, 146, 176, 246
HpyAV CCTTC 5 cut(s) 571, 860, 1335, 1482, 1796
HpyCH4III ACNGT 7 cut(s) 376, 795, 929, 1527, 1772, 1835, 1885
HpyCH4IV ACGT 4 cut(s) 59, 150, 339, 750
HpyCH4V TGCA 8 cut(s) 93, 932, 988, 1148, 1462, 1559, 1655, 1732
HpyF3I CTNAG 5 cut(s) 158, 401, 1245, 1505, 1659
HpySE526I ACGT 4 cut(s) 59, 150, 339, 750
Hsp92I GRCGYC 3 cut(s) 59, 132, 345
Hsp92II CATG 5 cut(s) 112, 891, 1148, 1583, 1630
HspAI GCGC 6 cut(s) 9, 231, 291, 354, 383, 424
KroI GCCGGC 1 cut(s) 11
KroNI GCCGGC 1 cut(s) 13
KspAI GTTAAC 1 cut(s) 1831
Kzo9I GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
LmnI GCTCC 8 cut(s) 72, 112, 207, 330, 552, 761, 1090, 1166
Lsp1109I GCAGC 6 cut(s) 18, 234, 622, 658, 1667, 1699
LweI GCATC 4 cut(s) 24, 102, 891, 1875
MaeI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
MaeII ACGT 4 cut(s) 59, 150, 339, 750
MaeIII GTNAC 5 cut(s) 79, 677, 1636, 1766, 1903
MalI GATC 9 cut(s) 22, 182, 365, 523, 569, 1264, 1386, 1650, 1705
MbiI CCGCTC 1 cut(s) 305
MboI GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
MboII GAAGA 9 cut(s) 956, 988, 1263, 1321, 1373, 1436, 1568, 1755, 1904
MflI RGATCY 3 cut(s) 20, 521, 1648
MhlI GDGCHC 4 cut(s) 150, 204, 327, 703
MlsI TGGCCA 1 cut(s) 1880
MluCI AATT 4 cut(s) 717, 1127, 1228, 1751
MluNI TGGCCA 1 cut(s) 1880
MlyI GAGTC 5 cut(s) 194, 293, 1202, 1421, 1475
MmeI TCCRAC 4 cut(s) 777, 1500, 1772, 1779
Mox20I TGGCCA 1 cut(s) 1880
MroNI GCCGGC 1 cut(s) 11
MroXI GAANNNNTTC 1 cut(s) 717
MscI TGGCCA 1 cut(s) 1880
MseI TTAA 6 cut(s) 1130, 1394, 1529, 1599, 1737, 1830
Msp20I TGGCCA 1 cut(s) 1880
MspA1I CMGCKG 3 cut(s) 197, 1354, 1846
MspI CCGG 6 cut(s) 12, 129, 328, 444, 493, 1572
MspR9I CCNGG 6 cut(s) 167, 445, 494, 759, 1518, 1572
Mva1269I GAATGC 1 cut(s) 736
MvaI CCWGG 3 cut(s) 167, 759, 1518
MvnI CGCG 5 cut(s) 218, 231, 291, 354, 424
NaeI GCCGGC 1 cut(s) 13
NciI CCSGG 3 cut(s) 445, 494, 1572
NcoI CCATGG 1 cut(s) 108
NdeI CATATG 1 cut(s) 619
NdeII GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
NgoMIV GCCGGC 1 cut(s) 11
NlaIII CATG 5 cut(s) 112, 891, 1148, 1583, 1630
NlaIV GGNNCC 4 cut(s) 22, 326, 491, 1616
NmeAIII GCCGAG 1 cut(s) 382
NmuCI GTSAC 3 cut(s) 79, 677, 1766
PcsI WCGNNNNNNNCGW 2 cut(s) 141, 180
PctI GAATGC 1 cut(s) 736
PdiI GCCGGC 1 cut(s) 13
PdmI GAANNNNTTC 1 cut(s) 717
PfeI GAWTC 2 cut(s) 724, 1454
PflFI GACNNNGTC 1 cut(s) 61
PleI GAGTC 5 cut(s) 193, 293, 1201, 1421, 1474
PmaCI CACGTG 1 cut(s) 340
PmlI CACGTG 1 cut(s) 340
PpsI GAGTC 5 cut(s) 193, 293, 1201, 1421, 1474
Ppu21I YACGTR 2 cut(s) 340, 751
PshBI ATTAAT 1 cut(s) 1737
Psp6I CCWGG 3 cut(s) 165, 757, 1516
PspCI CACGTG 1 cut(s) 340
PspFI CCCAGC 2 cut(s) 237, 842
PspGI CCWGG 3 cut(s) 165, 757, 1516
PspN4I GGNNCC 4 cut(s) 22, 326, 491, 1616
PspPI GGNCC 1 cut(s) 869
PstI CTGCAG 1 cut(s) 1657
PstNI CAGNNNCTG 1 cut(s) 727
PsuI RGATCY 3 cut(s) 20, 521, 1648
PsyI GACNNNGTC 1 cut(s) 61
RsaI GTAC 2 cut(s) 221, 1345
RsaNI GTAC 2 cut(s) 220, 1344
SaqAI TTAA 6 cut(s) 1130, 1394, 1529, 1599, 1737, 1830
Sau3AI GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
Sau96I GGNCC 1 cut(s) 869
SchI GAGTC 5 cut(s) 194, 293, 1202, 1421, 1475
ScrFI CCNGG 6 cut(s) 167, 445, 494, 759, 1518, 1572
SduI GDGCHC 4 cut(s) 150, 204, 327, 703
SfaNI GCATC 4 cut(s) 24, 102, 891, 1875
SfcI CTRYAG 4 cut(s) 1449, 1653, 1834, 1884
SmlI CTYRAG 1 cut(s) 1429
SmoI CTYRAG 1 cut(s) 1429
Sse9I AATT 4 cut(s) 717, 1127, 1228, 1751
SspMI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
StyD4I CCNGG 6 cut(s) 165, 443, 492, 757, 1516, 1570
StyI CCWWGG 3 cut(s) 108, 274, 1188
TaaI ACNGT 7 cut(s) 376, 795, 929, 1527, 1772, 1835, 1885
TaiI ACGT 4 cut(s) 62, 153, 342, 753
TaqI TCGA 5 cut(s) 96, 144, 183, 585, 1869
TaqII GACCGA 1 cut(s) 1230
TasI AATT 4 cut(s) 717, 1127, 1228, 1751
TauI GCSGC 8 cut(s) 140, 165, 236, 314, 469, 530, 533, 874
TfiI GAWTC 2 cut(s) 724, 1454
Tru1I TTAA 6 cut(s) 1130, 1394, 1529, 1599, 1737, 1830
Tru9I TTAA 6 cut(s) 1130, 1394, 1529, 1599, 1737, 1830
TscAI CASTG 3 cut(s) 577, 934, 1888
TseFI GTSAC 3 cut(s) 79, 677, 1766
TseI GCWGC 6 cut(s) 6, 247, 635, 671, 1655, 1712
Tsp45I GTSAC 3 cut(s) 79, 677, 1766
TspDTI ATGAA 6 cut(s) 683, 726, 1080, 1086, 1335, 1568
TspGWI ACGGA 1 cut(s) 970
TspRI CASTG 3 cut(s) 577, 934, 1888
Tth111I GACNNNGTC 1 cut(s) 61
VspI ATTAAT 1 cut(s) 1737
XapI RAATTY 2 cut(s) 1228, 1751
XbaI TCTAGA 1 cut(s) 1493
XmnI GAANNNNTTC 1 cut(s) 717
XspI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
ZraI GACGTC 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.