RchiOBHm_Chr1g0357601

C-terminal binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001355
Physical Location & Seq
Forward (+)
49922913 .. 49927558
4646 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58282

Sequence Viewer

Length: 1923 bp
ATGAGCAGCGCCGGCATCGAATCCCCCGCCACAATGTCCCACCGCACCACCCAAACGACGTCGTCGCTCCCCCTCGTCGTCACTCTCAACTGCATCGAAGACTTCGCCATGGAGCAAGACTGCTTGTCCGGCGTCGCCGCCGTCGAGCACGTCCCTCTCAGCCGCCTGGCCGACGGCAGGATCGAGTCCGCCTCCGCCGTGCTCCTCCAGTCCCTCGCCTACCTCCCACGCGCCGCCCAGCGCCGGCTGCGTCCTTACCAGCTCATCCTCTGCCTTGGGTCTGCTGACCGCGCCACCGACTCCGCTCTCGCCGCCGACCTCGGGCTCCGGCTCGTCCACGTGGACGCCTCCCGCGCCGAGGAGATCGCCGATACGGTTATGGCGCTGTTTCTAGGGTTGCTGAGGAGGACGCACTTGCTCTCGCGCCAAACGCTTTCGGCTTCCGGGTGGCTTGGTTCGGTTCAGCCGCTTTGCCGTGGGATGAGGCGGTGCCGGGGCTTGGTTTTGGGGATTATTGGTAGATCTGCGGCGGCGAGGTCTCTGGCTACTAGAAGCTTGGCCTTCAAGATCAGTGTGCTGTATTTTGATGTAGAGGTGAACGGAAAAGTGAGTAGGTCTTATGGCTTTCCTTCTGCTGCCCGAAAGATGGATACTCTAAATGACTTACTTGCTGCGAGTGACCTCATTTCGCTTCATTGTGCTCTGACAAATGAAACAATTCAGATTCTGAATGCTGAATGTTTACAGCACGTAAAGCCTGGAGCATTTCTTGTAAACACAGGGAGCAGTCAACTGTTGGATGATTGTTTTGTGAAACAGCTTTTGATTGATGGAACTTTAGCTGGGTGTGCTTTGGATGGTGCTGAAGGGCCGCAATGGATGGAAGCATGGGTAAAGGAGATGCCCAATGTGTTGATACTTCCGCACAGTGCAGATTATAGTGAAGAAGTATGGCTGGAGATAAGGGATAAGGCAATATCTGTATTGCAGGCATTCTTCTTTGATGGGGTTGTTCCAAAAAATGTTGTATCTGATGAGGATGAGGAGGAAAGTGAAATAGGTGATGAAAATGAACACTCTGATAAACTGGAGCAAGAAAATCCCTTACAGCTAACCCTTGTTCAGCAATTAACTGATGTTAGTCATGCAAGTCCAGAAAGCTCCCTGCATAAAGAAACCAATCAATCCAAGGAGTCTCCTAGCCAGCAAGGTTCGGGTTTGTCTCAAAATTCAACTACTCGGTCCGATGGAAGACGAAGTAGATCAGGTAAGAAAGCCAAAAAGAGGCACACACATCAGAAATCCCAGAAGAAATCAGATGAACCTTCACTAGCAAAAGAAAGTACCTCACAGCGGGAGGAAGATACGACTATGAGTGGCACAGATCAAGCGTTAAGTTCCAGTTCTCGGTTTGCTTCCCCTGAAGACTCAAGAAGTAGGAAAACACCTATAGAATCAATGCAAGAGTCGCCTTCCGACCAGCTTCTAAAATCTAGAAAGAGGCTGAGTGGAAAGCCTGGTGAACTGTTAAAGGATGGCTATGTTGTAGCTCTATATGCAAGAGATAGCCCCGGTCTTCATGTTGCAAGGCAAAGAGTTAAAGGTGGTGGTTGGTTCCTAGATACCATGTCAAATGTAACGAAAAGAGATCCTGCAGTTCAGTTCCTCATTGTAATCAGAAGCAAGGATACCATTGGTTTGCGATCTTTTGCTGCTGGTGGAAAGTTATTGCAGATAAATAGAAGAATGGAATTTGTATTTGCAAGTCACAGTTTTGATGTTTGGGAGAGTTGGATGTTGGAAGGTTCTCTGGGCGAGTGTAGGCTGGTTAACTGTAGAAATCCACTGGCTGTTTTGGATGTAAGCATCGAGATACTGGCCACTGTAGGCGAAGATGATGGGGTAACACGCTGGCTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008360 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010482 GO:0010494 GO:0010769 GO:0012505 GO:0016043 GO:0016049 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030856 GO:0031128 GO:0031129 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0040007 GO:0042802 GO:0042803 GO:0042814 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0046983 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048468 GO:0048530 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051302 GO:0060284 GO:0060560 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071826 GO:0071840 GO:0090558 GO:0090567 GO:0090626 GO:0090696 GO:0090697 GO:0090698 GO:0098791 GO:0099402 GO:1905392 GO:1990904 GO:2000024 GO:2000026 GO:2000039
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2-Hacid_dh_C

Protein Analysis

640

Amino Acids

70.11

Weight (kDa)

5.95

Isoelectric Point (pI)

62.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2-Hacid_dh_C PF02826 127 - 311 1.8e-27 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 62
AccB1I GGYRCC 1 cut(s) 489
AccBSI CCGCTC 1 cut(s) 305
AccII CGCG 4 cut(s) 231, 291, 354, 424
AclWI GGATC 2 cut(s) 188, 1643
AcoI YGGCCR 2 cut(s) 168, 1878
AcsI RAATTY 2 cut(s) 1228, 1751
AcuI CTGAAG 2 cut(s) 885, 1443
AcvI CACGTG 1 cut(s) 340
AcyI GRCGYC 3 cut(s) 59, 132, 345
AfaI GTAC 1 cut(s) 1345
AfiI CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1284, 1353, 1407
AgsI TTSAA 2 cut(s) 565, 1233
AhdI GACNNNNNGTC 1 cut(s) 124
AjiI CACGTC 1 cut(s) 151
AjnI CCWGG 3 cut(s) 165, 757, 1516
AluBI AGCT 8 cut(s) 262, 555, 820, 842, 1111, 1161, 1483, 1550
AluI AGCT 8 cut(s) 262, 555, 820, 842, 1111, 1161, 1483, 1550
Alw21I GWGCWC 3 cut(s) 150, 204, 703
Alw26I GTCTC 3 cut(s) 543, 1200, 1227
AlwI GGATC 2 cut(s) 188, 1643
AlwNI CAGNNNCTG 1 cut(s) 727
Ama87I CYCGRG 1 cut(s) 320
AoxI GGCC 4 cut(s) 168, 558, 869, 1878
ApeKI GCWGC 5 cut(s) 6, 247, 635, 671, 1712
ApoI RAATTY 2 cut(s) 1228, 1751
Asp700I GAANNNNTTC 1 cut(s) 717
AspLEI GCGC 7 cut(s) 11, 233, 243, 293, 356, 385, 426
AspS9I GGNCC 2 cut(s) 869, 1242
AsuC2I CCSGG 3 cut(s) 445, 494, 1572
AsuHPI GGTGA 3 cut(s) 607, 1073, 1532
AvaI CYCGRG 1 cut(s) 320
AvaII GGWCC 1 cut(s) 1242
BalI TGGCCA 1 cut(s) 1880
BanI GGYRCC 1 cut(s) 489
BanII GRGCYC 1 cut(s) 327
BarI GAAGNNNNNNTAC 2 cut(s) 1672, 1704
BbrPI CACGTG 1 cut(s) 340
BbsI GAAGAC 4 cut(s) 105, 1258, 1431, 1568
Bbv12I GWGCWC 3 cut(s) 150, 204, 703
BbvCI CCTCAGC 1 cut(s) 401
BbvI GCAGC 5 cut(s) 18, 234, 622, 658, 1699
BccI CCATC 8 cut(s) 640, 824, 851, 874, 998, 1241, 1529, 1892
BceAI ACGGC 4 cut(s) 125, 182, 190, 459
BciT130I CCWGG 3 cut(s) 167, 759, 1518
BciVI GTATCC 2 cut(s) 643, 1681
BcnI CCSGG 3 cut(s) 445, 494, 1572
BcoDI GTCTC 3 cut(s) 543, 1200, 1227
BfaI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
BfmI CTRYAG 4 cut(s) 1449, 1653, 1834, 1884
BfoI RGCGCY 3 cut(s) 12, 244, 386
BfuI GTATCC 2 cut(s) 643, 1681
BglII AGATCT 1 cut(s) 521
Bme1390I CCNGG 6 cut(s) 167, 445, 494, 759, 1518, 1572
Bme18I GGWCC 1 cut(s) 1242
BmeRI GACNNNNNGTC 1 cut(s) 124
BmeT110I CYCGRG 1 cut(s) 320
BmgBI CACGTC 1 cut(s) 151
BmgT120I GGNCC 2 cut(s) 869, 1242
BmiI GGNNCC 3 cut(s) 326, 491, 1616
BmrFI CCNGG 6 cut(s) 167, 445, 494, 759, 1518, 1572
BmsI GCATC 4 cut(s) 24, 102, 891, 1875
BpiI GAAGAC 4 cut(s) 105, 1258, 1431, 1568
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 4 cut(s) 191, 780, 977, 1109
Bpu10I CCTNAGC 1 cut(s) 401
BpuEI CTTGAG 1 cut(s) 1414
BpuMI CCSGG 3 cut(s) 445, 494, 1572
BsaAI YACGTR 2 cut(s) 340, 751
BsaHI GRCGYC 3 cut(s) 59, 132, 345
BsaI GGTCTC 1 cut(s) 543
BsaJI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1188, 1570
Bsc4I CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1284, 1353, 1407
Bse118I RCCGGY 2 cut(s) 11, 243
Bse1I ACTGG 5 cut(s) 208, 1092, 1401, 1851, 1881
Bse3DI GCAATG 1 cut(s) 881
BseBI CCWGG 3 cut(s) 167, 759, 1518
BseDI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1188, 1570
BseGI GGATG 9 cut(s) 264, 486, 805, 862, 885, 1045, 1540, 1800, 1864
BseLI CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1284, 1353, 1407
BseMI GCAATG 1 cut(s) 881
BseMII CTCAG 3 cut(s) 172, 392, 1496
BseNI ACTGG 5 cut(s) 208, 1092, 1401, 1851, 1881
BseRI GAGGAG 4 cut(s) 194, 374, 418, 1058
BseXI GCAGC 5 cut(s) 18, 234, 622, 658, 1699
BseYI CCCAGC 2 cut(s) 237, 842
BsgI GTGCAG 1 cut(s) 951
Bsh1236I CGCG 4 cut(s) 231, 291, 354, 424
BshFI GGCC 4 cut(s) 170, 560, 871, 1880
BshNI GGYRCC 1 cut(s) 489
BsiHKAI GWGCWC 3 cut(s) 150, 204, 703
BsiHKCI CYCGRG 1 cut(s) 320
BsiSI CCGG 7 cut(s) 12, 129, 244, 328, 444, 493, 1572
BslFI GGGAC 3 cut(s) 22, 137, 196
BslI CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1284, 1353, 1407
BsmAI GTCTC 3 cut(s) 543, 1200, 1227
BsmFI GGGAC 3 cut(s) 22, 137, 196
BsmI GAATGC 2 cut(s) 736, 992
BsnI GGCC 4 cut(s) 170, 560, 871, 1880
Bso31I GGTCTC 1 cut(s) 543
BsoBI CYCGRG 1 cut(s) 320
Bsp1286I GDGCHC 4 cut(s) 150, 204, 327, 703
Bsp143I GATC 8 cut(s) 180, 363, 521, 567, 1262, 1384, 1648, 1703
Bsp19I CCATGG 1 cut(s) 108
BspANI GGCC 4 cut(s) 170, 560, 871, 1880
BspCNI CTCAG 3 cut(s) 171, 393, 1497
BspFNI CGCG 4 cut(s) 231, 291, 354, 424
BspLI GGNNCC 3 cut(s) 326, 491, 1616
BspMAI CTGCAG 1 cut(s) 1657
BspPI GGATC 2 cut(s) 188, 1643
BspT107I GGYRCC 1 cut(s) 489
BspTNI GGTCTC 1 cut(s) 543
BsrBI CCGCTC 1 cut(s) 305
BsrDI GCAATG 1 cut(s) 881
BsrFI RCCGGY 2 cut(s) 11, 243
BsrI ACTGG 5 cut(s) 208, 1092, 1401, 1851, 1881
BssAI RCCGGY 2 cut(s) 11, 243
BssECI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1188, 1570
BssMI GATC 8 cut(s) 180, 363, 521, 567, 1262, 1384, 1648, 1703
BssNI GRCGYC 3 cut(s) 59, 132, 345
BssT1I CCWWGG 3 cut(s) 108, 274, 1188
Bst2UI CCWGG 3 cut(s) 167, 759, 1518
Bst4CI ACNGT 7 cut(s) 376, 795, 929, 1527, 1772, 1835, 1885
BstACI GRCGYC 3 cut(s) 59, 132, 345
BstBAI YACGTR 2 cut(s) 340, 751
BstC8I GCNNGC 5 cut(s) 13, 245, 990, 1205, 1913
BstDEI CTNAG 3 cut(s) 158, 401, 1505
BstDSI CCRYGG 2 cut(s) 108, 475
BstF5I GGATG 9 cut(s) 264, 486, 805, 862, 885, 1045, 1540, 1800, 1864
BstFNI CGCG 4 cut(s) 231, 291, 354, 424
BstH2I RGCGCY 3 cut(s) 12, 244, 386
BstHHI GCGC 7 cut(s) 11, 233, 243, 293, 356, 385, 426
BstKTI GATC 8 cut(s) 183, 366, 524, 570, 1265, 1387, 1651, 1706
BstMAI GTCTC 3 cut(s) 543, 1200, 1227
BstMBI GATC 8 cut(s) 180, 363, 521, 567, 1262, 1384, 1648, 1703
BstNI CCWGG 3 cut(s) 167, 759, 1518
BstSCI CCNGG 6 cut(s) 165, 443, 492, 757, 1516, 1570
BstSFI CTRYAG 4 cut(s) 1449, 1653, 1834, 1884
BstUI CGCG 4 cut(s) 231, 291, 354, 424
BstV1I GCAGC 5 cut(s) 18, 234, 622, 658, 1699
BstV2I GAAGAC 4 cut(s) 105, 1258, 1431, 1568
BstX2I RGATCY 2 cut(s) 521, 1648
BstYI RGATCY 2 cut(s) 521, 1648
BsuI GTATCC 2 cut(s) 643, 1681
BsuRI GGCC 4 cut(s) 170, 560, 871, 1880
BtgI CCRYGG 2 cut(s) 108, 475
BtrI CACGTC 1 cut(s) 151
BtsCI GGATG 9 cut(s) 264, 486, 805, 862, 885, 1045, 1540, 1800, 1864
BtsIMutI CAGTG 4 cut(s) 577, 934, 1844, 1881
Cac8I GCNNGC 5 cut(s) 13, 245, 990, 1205, 1913
CaiI CAGNNNCTG 1 cut(s) 727
CfoI GCGC 7 cut(s) 11, 233, 243, 293, 356, 385, 426
Cfr10I RCCGGY 2 cut(s) 11, 243
Cfr13I GGNCC 2 cut(s) 869, 1242
CpoI CGGWCCG 1 cut(s) 1242
CseI GACGC 4 cut(s) 121, 239, 353, 418
Csp6I GTAC 1 cut(s) 1344
CspI CGGWCCG 1 cut(s) 1242
CviAII CATG 5 cut(s) 109, 888, 1145, 1580, 1627
CviQI GTAC 1 cut(s) 1344
DdeI CTNAG 3 cut(s) 158, 401, 1505
DpnI GATC 8 cut(s) 182, 365, 523, 569, 1264, 1386, 1650, 1705
DpnII GATC 8 cut(s) 180, 363, 521, 567, 1262, 1384, 1648, 1703
DriI GACNNNNNGTC 1 cut(s) 124
EaeI YGGCCR 2 cut(s) 168, 1878
Eam1105I GACNNNNNGTC 1 cut(s) 124
EciI GGCGGA 2 cut(s) 178, 184
Eco130I CCWWGG 3 cut(s) 108, 274, 1188
Eco24I GRGCYC 1 cut(s) 327
Eco31I GGTCTC 1 cut(s) 543
Eco47I GGWCC 1 cut(s) 1242
Eco57I CTGAAG 2 cut(s) 885, 1443
Eco72I CACGTG 1 cut(s) 340
Eco88I CYCGRG 1 cut(s) 320
EcoRII CCWGG 3 cut(s) 165, 757, 1516
EcoT14I CCWWGG 3 cut(s) 108, 274, 1188
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 3 cut(s) 108, 274, 1188
FaeI CATG 5 cut(s) 112, 891, 1148, 1583, 1630
FaqI GGGAC 3 cut(s) 22, 137, 196
FatI CATG 5 cut(s) 108, 887, 1144, 1579, 1626
FauI CCCGC 3 cut(s) 34, 359, 1347
FokI GGATG 9 cut(s) 251, 493, 812, 869, 892, 1052, 1547, 1807, 1871
FriOI GRGCYC 1 cut(s) 327
FspBI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
GlaI GCGC 7 cut(s) 10, 232, 242, 292, 355, 384, 425
GsaI CCCAGC 2 cut(s) 241, 846
GsuI CTGGAG 4 cut(s) 191, 780, 977, 1109
HaeII RGCGCY 3 cut(s) 12, 244, 386
HaeIII GGCC 4 cut(s) 170, 560, 871, 1880
HapII CCGG 7 cut(s) 12, 129, 244, 328, 444, 493, 1572
HgaI GACGC 4 cut(s) 121, 239, 353, 418
HhaI GCGC 7 cut(s) 11, 233, 243, 293, 356, 385, 426
Hin1I GRCGYC 3 cut(s) 59, 132, 345
Hin1II CATG 5 cut(s) 112, 891, 1148, 1583, 1630
Hin6I GCGC 7 cut(s) 9, 231, 241, 291, 354, 383, 424
HinP1I GCGC 7 cut(s) 9, 231, 241, 291, 354, 383, 424
HincII GTYRAC 2 cut(s) 791, 1831
HindII GTYRAC 2 cut(s) 791, 1831
HindIII AAGCTT 1 cut(s) 553
HinfI GANTC 8 cut(s) 20, 185, 299, 724, 1193, 1427, 1454, 1466
HpaI GTTAAC 1 cut(s) 1831
HpaII CCGG 7 cut(s) 12, 129, 244, 328, 444, 493, 1572
HphI GGTGA 3 cut(s) 607, 1073, 1532
Hpy166II GTNNAC 8 cut(s) 337, 343, 598, 743, 775, 791, 1523, 1831
Hpy188III TCNNGA 5 cut(s) 565, 1154, 1431, 1494, 1870
Hpy8I GTNNAC 8 cut(s) 337, 343, 598, 743, 775, 791, 1523, 1831
Hpy99I CGWCG 7 cut(s) 61, 64, 67, 80, 137, 146, 176
HpyAV CCTTC 6 cut(s) 571, 639, 860, 1335, 1482, 1796
HpyCH4III ACNGT 7 cut(s) 376, 795, 929, 1527, 1772, 1835, 1885
HpyCH4IV ACGT 4 cut(s) 59, 150, 339, 750
HpyF3I CTNAG 3 cut(s) 158, 401, 1505
HpySE526I ACGT 4 cut(s) 59, 150, 339, 750
Hsp92I GRCGYC 3 cut(s) 59, 132, 345
Hsp92II CATG 5 cut(s) 112, 891, 1148, 1583, 1630
HspAI GCGC 7 cut(s) 9, 231, 241, 291, 354, 383, 424
KroI GCCGGC 2 cut(s) 11, 243
KroNI GCCGGC 2 cut(s) 13, 245
KspAI GTTAAC 1 cut(s) 1831
Kzo9I GATC 8 cut(s) 180, 363, 521, 567, 1262, 1384, 1648, 1703
LmnI GCTCC 8 cut(s) 72, 112, 207, 330, 761, 783, 1090, 1166
Lsp1109I GCAGC 5 cut(s) 18, 234, 622, 658, 1699
LweI GCATC 4 cut(s) 24, 102, 891, 1875
MaeI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
MaeII ACGT 4 cut(s) 59, 150, 339, 750
MaeIII GTNAC 5 cut(s) 79, 677, 1636, 1766, 1903
MalI GATC 8 cut(s) 182, 365, 523, 569, 1264, 1386, 1650, 1705
MbiI CCGCTC 1 cut(s) 305
MboI GATC 8 cut(s) 180, 363, 521, 567, 1262, 1384, 1648, 1703
MflI RGATCY 2 cut(s) 521, 1648
MhlI GDGCHC 4 cut(s) 150, 204, 327, 703
MlsI TGGCCA 1 cut(s) 1880
MluCI AATT 4 cut(s) 717, 1127, 1228, 1751
MluNI TGGCCA 1 cut(s) 1880
MlyI GAGTC 5 cut(s) 194, 293, 1202, 1421, 1475
MmeI TCCRAC 4 cut(s) 777, 1500, 1772, 1779
Mox20I TGGCCA 1 cut(s) 1880
MroNI GCCGGC 2 cut(s) 11, 243
MroXI GAANNNNTTC 1 cut(s) 717
MscI TGGCCA 1 cut(s) 1880
MseI TTAA 5 cut(s) 1130, 1394, 1529, 1599, 1830
Msp20I TGGCCA 1 cut(s) 1880
MspA1I CMGCKG 1 cut(s) 1354
MspI CCGG 7 cut(s) 12, 129, 244, 328, 444, 493, 1572
MspR9I CCNGG 6 cut(s) 167, 445, 494, 759, 1518, 1572
Mva1269I GAATGC 2 cut(s) 736, 992
MvaI CCWGG 3 cut(s) 167, 759, 1518
MvnI CGCG 4 cut(s) 231, 291, 354, 424
NaeI GCCGGC 2 cut(s) 13, 245
NciI CCSGG 3 cut(s) 445, 494, 1572
NcoI CCATGG 1 cut(s) 108
NdeII GATC 8 cut(s) 180, 363, 521, 567, 1262, 1384, 1648, 1703
NgoMIV GCCGGC 2 cut(s) 11, 243
NlaIII CATG 5 cut(s) 112, 891, 1148, 1583, 1630
NlaIV GGNNCC 3 cut(s) 326, 491, 1616
NmeAIII GCCGAG 1 cut(s) 382
NmuCI GTSAC 3 cut(s) 79, 677, 1766
PcsI WCGNNNNNNNCGW 2 cut(s) 141, 180
PctI GAATGC 2 cut(s) 736, 992
PdiI GCCGGC 2 cut(s) 13, 245
PdmI GAANNNNTTC 1 cut(s) 717
PfeI GAWTC 3 cut(s) 20, 724, 1454
PflFI GACNNNGTC 1 cut(s) 61
PleI GAGTC 5 cut(s) 193, 293, 1201, 1421, 1474
PmaCI CACGTG 1 cut(s) 340
PmlI CACGTG 1 cut(s) 340
PpsI GAGTC 5 cut(s) 193, 293, 1201, 1421, 1474
Ppu21I YACGTR 2 cut(s) 340, 751
Psp6I CCWGG 3 cut(s) 165, 757, 1516
PspCI CACGTG 1 cut(s) 340
PspFI CCCAGC 2 cut(s) 237, 842
PspGI CCWGG 3 cut(s) 165, 757, 1516
PspN4I GGNNCC 3 cut(s) 326, 491, 1616
PspPI GGNCC 2 cut(s) 869, 1242
PstI CTGCAG 1 cut(s) 1657
PstNI CAGNNNCTG 1 cut(s) 727
PsuI RGATCY 2 cut(s) 521, 1648
PsyI GACNNNGTC 1 cut(s) 61
RsaI GTAC 1 cut(s) 1345
RsaNI GTAC 1 cut(s) 1344
Rsr2I CGGWCCG 1 cut(s) 1242
RsrII CGGWCCG 1 cut(s) 1242
SaqAI TTAA 5 cut(s) 1130, 1394, 1529, 1599, 1830
Sau3AI GATC 8 cut(s) 180, 363, 521, 567, 1262, 1384, 1648, 1703
Sau96I GGNCC 2 cut(s) 869, 1242
SchI GAGTC 5 cut(s) 194, 293, 1202, 1421, 1475
ScrFI CCNGG 6 cut(s) 167, 445, 494, 759, 1518, 1572
SduI GDGCHC 4 cut(s) 150, 204, 327, 703
SfaNI GCATC 4 cut(s) 24, 102, 891, 1875
SfcI CTRYAG 4 cut(s) 1449, 1653, 1834, 1884
SinI GGWCC 1 cut(s) 1242
SmlI CTYRAG 1 cut(s) 1429
SmoI CTYRAG 1 cut(s) 1429
Sse9I AATT 4 cut(s) 717, 1127, 1228, 1751
SspMI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
StyD4I CCNGG 6 cut(s) 165, 443, 492, 757, 1516, 1570
StyI CCWWGG 3 cut(s) 108, 274, 1188
TaaI ACNGT 7 cut(s) 376, 795, 929, 1527, 1772, 1835, 1885
TaiI ACGT 4 cut(s) 62, 153, 342, 753
TaqI TCGA 5 cut(s) 18, 96, 144, 183, 1869
TaqII GACCGA 1 cut(s) 1230
TasI AATT 4 cut(s) 717, 1127, 1228, 1751
TauI GCSGC 8 cut(s) 140, 165, 236, 314, 469, 530, 533, 874
TfiI GAWTC 3 cut(s) 20, 724, 1454
Tru1I TTAA 5 cut(s) 1130, 1394, 1529, 1599, 1830
Tru9I TTAA 5 cut(s) 1130, 1394, 1529, 1599, 1830
TscAI CASTG 4 cut(s) 577, 934, 1851, 1888
TseFI GTSAC 3 cut(s) 79, 677, 1766
TseI GCWGC 5 cut(s) 6, 247, 635, 671, 1712
Tsp45I GTSAC 3 cut(s) 79, 677, 1766
TspDTI ATGAA 6 cut(s) 683, 726, 1080, 1086, 1335, 1568
TspGWI ACGGA 1 cut(s) 615
TspRI CASTG 4 cut(s) 577, 934, 1851, 1888
Tth111I GACNNNGTC 1 cut(s) 61
VpaK11BI GGWCC 1 cut(s) 1242
XapI RAATTY 2 cut(s) 1228, 1751
XbaI TCTAGA 1 cut(s) 1493
XmnI GAANNNNTTC 1 cut(s) 717
XspI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
ZraI GACGTC 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.