RLG00000028018

C-terminal binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0001355
Physical Location & Seq
Reverse (-)
17748496 .. 17752021
3526 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028018

Sequence Viewer

Length: 1875 bp
ATGAGCAGCGCCGGCATCGGATCCCCCGCCACAATGTCCCACCGCACCACCCAAACGACGTCGTCGCTCCCCCTCGTCGTCACTCTCAACTGCATCGATGACTTCGCCATGGAGCAAGACTGCTTGTCTGGCGTCGCCGTCGTCGAGCACGTCCCTCTCAGCCGCTTGGCCGACGGCAGGATCGAGTCCGCCTCCGCTGTGCTCCTCCAGTCCCTCGCGTACCTCCCACGCGCCGCGCAGCGTCGCCTACGTCCTTACCAGCTCATCCTCTGCCTTGGGTCTGCTGACCGCGCCACCGACTCCGCTCTCGCCGCCGACCTCGGGCTCCGGCTCGTCCACGTGGACGCCTCCCGCGCCGAGGAGATCGCCGATACTGTTATGGCGCTGTTTCTAGGATTGCTGAGGAGGACGCACTTGCTCTCGCGCCAAACGCTTTCGGCTTCGGGGTGGCTTGGTTCGGTTCAGCCGCTTTGCCGTGGGATGAGGCGGTGCCGGGGCTTGGTTTTGGGGATTATTGGTAGATCTGCGGCGGCGAGGTCTCTGGCTACTAGAATCTTGGCCTTCAAGATCAGTGTGCTGTATTTTGATGTAGAGGTGAACGGAAAAGTCAGTAGGTCGTATGGCTTTCCTTCTGCTGCCCGAAAGATGGATACTCTAAATGACTTACTTGCTGCGAGTGACCTTATTTCGCTTCATTGTGCTCTGACAAATGAAACAATTCAGATTCTGAATGCTGAATGTTTACAGCATGTAAAGCCTGGAGCATTTCTTGTAAACACGGGGAGCAGTCAACTGTTGGATGATTGTTTTGTGAAACAGCTTTTGATTGATGGTACTTTAGCTGGGTGTGCTTTGGATGGTGCTGAAGGGCCGCAATGGATGGAAGCATGGGTAAAGGAGATGCCCAATGTGTTGATACTTCCGCACAGTGCAGATTATAGTGAAGAAGTATGGCTGGAGATAAGGGAGAAAGCAATATCTGTATTGCAGACATTCTTCTTTGATGGGGTTGTTCCAAAAAATGTTATATCTGATGAGGATGAGGAGGAAAGTGAAATAGGGGATGAAAATGAACACTCTGATAAACTGGAGCAAGAAAATCCCTTACAGCTAACCCTTGTTCAGCAATTAACTGATGTTAGTCATGCAAGTCCAGAAAGCTCCCTGAATAAAGAAACCAATCAATCCAAGGAGTCTCCTAGCCAGCAAGGTTCGGGTTTGTCTCAAAATTCAACTACTCGGTCTGATGGAAGACGAAGTAGATCAGGTAAGAAAGCCAAAAAGAGGCACACACATCAGAAATCCCAGAAGAAATCAGATGAACCTTCACTAGCAAAAGAAAGTACCTCACAGCGGGAGGAAGATACGACTATGAGTGGCACAGATCAAGCGTTAAGTTCCAGTTCTCGGTTTGCTTCCCCCGAAGACTCAAGAAGTAGGAAAACACCTATAGAATCAATGCAAGAGTCGCCTTCCGACCAGCTTCTAAAATCTAGAAAGAGGTTGAGTGGAAAGCCGGGTGAACTGTTAAAGGACGGCTATGTTGTAGCTCTATACGCAAGAGATAGCCCCGGTTTTCATGTCGCAAGGCAAAGAGTTAAAGGTGGTGGTTGGTTCCTAGATACCATGTCAAATGTAACGAAAAGAGATCCTGCAGCTCAGTTCCTCATTGTAATCAGAAGCAAGGATACCATTGGTTTACGATCTTTTGCTGCTGGTGGAAAGTTATTGCAGATAAATAGAAGAATGGAATTTGTATTCGCAAGTCACAGTTTTGATGTTTGGGAGAGTTGGATGTTGGAAGGTTCTCTGGACGAGTGTAGGCTGGTTAACTGTAGAAATCCACTGGGCAACTTTGTAATGAGCAAATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008360 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010482 GO:0010494 GO:0010769 GO:0012505 GO:0016043 GO:0016049 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030856 GO:0031128 GO:0031129 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0040007 GO:0042802 GO:0042803 GO:0042814 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0046983 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048468 GO:0048530 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051302 GO:0060284 GO:0060560 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071826 GO:0071840 GO:0090558 GO:0090567 GO:0090626 GO:0090696 GO:0090697 GO:0090698 GO:0098791 GO:0099402 GO:1905392 GO:1990904 GO:2000024 GO:2000026 GO:2000039
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2-Hacid_dh_C

Protein Analysis

625

Amino Acids

68.48

Weight (kDa)

6.53

Isoelectric Point (pI)

60.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2-Hacid_dh_C PF02826 127 - 311 6.6e-28 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 62
AccB1I GGYRCC 1 cut(s) 489
AccBSI CCGCTC 1 cut(s) 305
AccII CGCG 6 cut(s) 218, 231, 236, 291, 354, 424
AclWI GGATC 4 cut(s) 15, 28, 188, 1643
AcoI YGGCCR 1 cut(s) 168
AcsI RAATTY 2 cut(s) 1228, 1751
AcuI CTGAAG 1 cut(s) 885
AcvI CACGTG 1 cut(s) 340
AcyI GRCGYC 3 cut(s) 59, 132, 345
AfaI GTAC 3 cut(s) 221, 835, 1345
AfiI CCNNNNNNNGG 8 cut(s) 177, 321, 358, 499, 646, 1284, 1353, 1407
AgsI TTSAA 2 cut(s) 565, 1233
AhdI GACNNNNNGTC 1 cut(s) 124
AjiI CACGTC 1 cut(s) 151
AjnI CCWGG 1 cut(s) 757
AluBI AGCT 8 cut(s) 262, 820, 842, 1111, 1161, 1483, 1550, 1658
AluI AGCT 8 cut(s) 262, 820, 842, 1111, 1161, 1483, 1550, 1658
Alw21I GWGCWC 3 cut(s) 150, 204, 703
Alw26I GTCTC 3 cut(s) 543, 1200, 1227
AlwI GGATC 4 cut(s) 15, 28, 188, 1643
AlwNI CAGNNNCTG 1 cut(s) 727
Ama87I CYCGRG 1 cut(s) 320
AoxI GGCC 3 cut(s) 168, 558, 869
ApeKI GCWGC 6 cut(s) 6, 238, 635, 671, 1655, 1712
ApoI RAATTY 2 cut(s) 1228, 1751
Asp700I GAANNNNTTC 1 cut(s) 717
AspLEI GCGC 7 cut(s) 11, 233, 238, 293, 356, 385, 426
AspS9I GGNCC 1 cut(s) 869
AsuC2I CCSGG 3 cut(s) 494, 1518, 1572
AsuHPI GGTGA 2 cut(s) 607, 1532
AvaI CYCGRG 1 cut(s) 320
BamHI GGATCC 1 cut(s) 20
BanI GGYRCC 1 cut(s) 489
BanII GRGCYC 1 cut(s) 327
BarI GAAGNNNNNNTAC 2 cut(s) 1672, 1704
BbrPI CACGTG 1 cut(s) 340
BbsI GAAGAC 2 cut(s) 1258, 1431
Bbv12I GWGCWC 3 cut(s) 150, 204, 703
BbvCI CCTCAGC 1 cut(s) 401
BbvI GCAGC 6 cut(s) 18, 250, 622, 658, 1667, 1699
BccI CCATC 6 cut(s) 640, 824, 851, 874, 998, 1241
BceAI ACGGC 4 cut(s) 122, 190, 459, 1552
BciT130I CCWGG 1 cut(s) 759
BciVI GTATCC 2 cut(s) 643, 1681
BcnI CCSGG 3 cut(s) 494, 1518, 1572
BcoDI GTCTC 3 cut(s) 543, 1200, 1227
BfaI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
BfmI CTRYAG 3 cut(s) 1449, 1653, 1834
BfoI RGCGCY 2 cut(s) 12, 386
BfuI GTATCC 2 cut(s) 643, 1681
BglII AGATCT 1 cut(s) 521
Bme1390I CCNGG 4 cut(s) 494, 759, 1518, 1572
BmeRI GACNNNNNGTC 1 cut(s) 124
BmeT110I CYCGRG 1 cut(s) 320
BmgBI CACGTC 1 cut(s) 151
BmgT120I GGNCC 1 cut(s) 869
BmiI GGNNCC 4 cut(s) 22, 326, 491, 1616
BmrFI CCNGG 4 cut(s) 494, 759, 1518, 1572
BmrI ACTGGG 1 cut(s) 1856
BmsI GCATC 3 cut(s) 24, 102, 891
BmuI ACTGGG 1 cut(s) 1856
BpiI GAAGAC 2 cut(s) 1258, 1431
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 4 cut(s) 191, 780, 977, 1109
Bpu10I CCTNAGC 1 cut(s) 401
BpuEI CTTGAG 1 cut(s) 1414
BpuMI CCSGG 3 cut(s) 494, 1518, 1572
Bsa29I ATCGAT 1 cut(s) 96
BsaAI YACGTR 1 cut(s) 340
BsaHI GRCGYC 3 cut(s) 59, 132, 345
BsaI GGTCTC 1 cut(s) 543
BsaJI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1188, 1570
Bsc4I CCNNNNNNNGG 8 cut(s) 177, 321, 358, 499, 646, 1284, 1353, 1407
Bse118I RCCGGY 1 cut(s) 11
Bse1I ACTGG 4 cut(s) 208, 1092, 1401, 1851
Bse3DI GCAATG 1 cut(s) 881
BseBI CCWGG 1 cut(s) 759
BseCI ATCGAT 1 cut(s) 96
BseDI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1188, 1570
BseGI GGATG 8 cut(s) 264, 486, 805, 862, 885, 1045, 1069, 1800
BseLI CCNNNNNNNGG 8 cut(s) 177, 321, 358, 499, 646, 1284, 1353, 1407
BseMI GCAATG 1 cut(s) 881
BseMII CTCAG 3 cut(s) 172, 392, 1673
BseNI ACTGG 4 cut(s) 208, 1092, 1401, 1851
BseRI GAGGAG 4 cut(s) 194, 374, 418, 1058
BseXI GCAGC 6 cut(s) 18, 250, 622, 658, 1667, 1699
BseYI CCCAGC 1 cut(s) 842
BsgI GTGCAG 1 cut(s) 951
Bsh1236I CGCG 6 cut(s) 218, 231, 236, 291, 354, 424
BshFI GGCC 3 cut(s) 170, 560, 871
BshNI GGYRCC 1 cut(s) 489
BshVI ATCGAT 1 cut(s) 96
BsiHKAI GWGCWC 3 cut(s) 150, 204, 703
BsiHKCI CYCGRG 1 cut(s) 320
BsiSI CCGG 5 cut(s) 12, 328, 493, 1517, 1572
BslFI GGGAC 3 cut(s) 22, 137, 196
BslI CCNNNNNNNGG 8 cut(s) 177, 321, 358, 499, 646, 1284, 1353, 1407
BsmAI GTCTC 3 cut(s) 543, 1200, 1227
BsmFI GGGAC 3 cut(s) 22, 137, 196
BsmI GAATGC 1 cut(s) 736
BsnI GGCC 3 cut(s) 170, 560, 871
Bso31I GGTCTC 1 cut(s) 543
BsoBI CYCGRG 1 cut(s) 320
Bsp1286I GDGCHC 4 cut(s) 150, 204, 327, 703
Bsp143I GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
Bsp19I CCATGG 1 cut(s) 108
BspANI GGCC 3 cut(s) 170, 560, 871
BspCNI CTCAG 3 cut(s) 171, 393, 1672
BspDI ATCGAT 1 cut(s) 96
BspFNI CGCG 6 cut(s) 218, 231, 236, 291, 354, 424
BspLI GGNNCC 4 cut(s) 22, 326, 491, 1616
BspMAI CTGCAG 1 cut(s) 1657
BspPI GGATC 4 cut(s) 15, 28, 188, 1643
BspT107I GGYRCC 1 cut(s) 489
BspTNI GGTCTC 1 cut(s) 543
BsrBI CCGCTC 1 cut(s) 305
BsrDI GCAATG 1 cut(s) 881
BsrFI RCCGGY 1 cut(s) 11
BsrI ACTGG 4 cut(s) 208, 1092, 1401, 1851
BssAI RCCGGY 1 cut(s) 11
BssECI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1188, 1570
BssMI GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
BssNI GRCGYC 3 cut(s) 59, 132, 345
BssT1I CCWWGG 3 cut(s) 108, 274, 1188
Bst2UI CCWGG 1 cut(s) 759
Bst4CI ACNGT 6 cut(s) 376, 795, 929, 1527, 1772, 1835
BstACI GRCGYC 3 cut(s) 59, 132, 345
BstBAI YACGTR 1 cut(s) 340
BstC8I GCNNGC 2 cut(s) 13, 1205
BstDEI CTNAG 3 cut(s) 158, 401, 1659
BstDSI CCRYGG 2 cut(s) 108, 475
BstF5I GGATG 8 cut(s) 264, 486, 805, 862, 885, 1045, 1069, 1800
BstFNI CGCG 6 cut(s) 218, 231, 236, 291, 354, 424
BstH2I RGCGCY 2 cut(s) 12, 386
BstHHI GCGC 7 cut(s) 11, 233, 238, 293, 356, 385, 426
BstKTI GATC 9 cut(s) 23, 183, 366, 524, 570, 1265, 1387, 1651, 1706
BstMAI GTCTC 3 cut(s) 543, 1200, 1227
BstMBI GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
BstNI CCWGG 1 cut(s) 759
BstNSI RCATGY 1 cut(s) 752
BstSCI CCNGG 4 cut(s) 492, 757, 1516, 1570
BstSFI CTRYAG 3 cut(s) 1449, 1653, 1834
BstUI CGCG 6 cut(s) 218, 231, 236, 291, 354, 424
BstV1I GCAGC 6 cut(s) 18, 250, 622, 658, 1667, 1699
BstV2I GAAGAC 2 cut(s) 1258, 1431
BstX2I RGATCY 3 cut(s) 20, 521, 1648
BstYI RGATCY 3 cut(s) 20, 521, 1648
Bsu15I ATCGAT 1 cut(s) 96
BsuI GTATCC 2 cut(s) 643, 1681
BsuRI GGCC 3 cut(s) 170, 560, 871
BsuTUI ATCGAT 1 cut(s) 96
BtgI CCRYGG 2 cut(s) 108, 475
BtrI CACGTC 1 cut(s) 151
BtsCI GGATG 8 cut(s) 264, 486, 805, 862, 885, 1045, 1069, 1800
BtsIMutI CAGTG 3 cut(s) 577, 934, 1844
Cac8I GCNNGC 2 cut(s) 13, 1205
CaiI CAGNNNCTG 1 cut(s) 727
CfoI GCGC 7 cut(s) 11, 233, 238, 293, 356, 385, 426
Cfr10I RCCGGY 1 cut(s) 11
Cfr13I GGNCC 1 cut(s) 869
ClaI ATCGAT 1 cut(s) 96
CseI GACGC 4 cut(s) 121, 230, 353, 418
Csp6I GTAC 3 cut(s) 220, 834, 1344
CviAII CATG 6 cut(s) 109, 749, 888, 1145, 1580, 1627
CviQI GTAC 3 cut(s) 220, 834, 1344
DdeI CTNAG 3 cut(s) 158, 401, 1659
DpnI GATC 9 cut(s) 22, 182, 365, 523, 569, 1264, 1386, 1650, 1705
DpnII GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
DriI GACNNNNNGTC 1 cut(s) 124
EaeI YGGCCR 1 cut(s) 168
Eam1105I GACNNNNNGTC 1 cut(s) 124
EciI GGCGGA 1 cut(s) 178
Eco130I CCWWGG 3 cut(s) 108, 274, 1188
Eco24I GRGCYC 1 cut(s) 327
Eco31I GGTCTC 1 cut(s) 543
Eco57I CTGAAG 1 cut(s) 885
Eco72I CACGTG 1 cut(s) 340
Eco88I CYCGRG 1 cut(s) 320
EcoRII CCWGG 1 cut(s) 757
EcoT14I CCWWGG 3 cut(s) 108, 274, 1188
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 3 cut(s) 108, 274, 1188
FaeI CATG 6 cut(s) 112, 752, 891, 1148, 1583, 1630
FaqI GGGAC 3 cut(s) 22, 137, 196
FatI CATG 6 cut(s) 108, 748, 887, 1144, 1579, 1626
FauI CCCGC 3 cut(s) 34, 359, 1347
FokI GGATG 8 cut(s) 251, 493, 812, 869, 892, 1052, 1076, 1807
FriOI GRGCYC 1 cut(s) 327
FspBI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
GlaI GCGC 7 cut(s) 10, 232, 237, 292, 355, 384, 425
GsaI CCCAGC 1 cut(s) 846
GsuI CTGGAG 4 cut(s) 191, 780, 977, 1109
HaeII RGCGCY 2 cut(s) 12, 386
HaeIII GGCC 3 cut(s) 170, 560, 871
HapII CCGG 5 cut(s) 12, 328, 493, 1517, 1572
HgaI GACGC 4 cut(s) 121, 230, 353, 418
HhaI GCGC 7 cut(s) 11, 233, 238, 293, 356, 385, 426
Hin1I GRCGYC 3 cut(s) 59, 132, 345
Hin1II CATG 6 cut(s) 112, 752, 891, 1148, 1583, 1630
Hin6I GCGC 7 cut(s) 9, 231, 236, 291, 354, 383, 424
HinP1I GCGC 7 cut(s) 9, 231, 236, 291, 354, 383, 424
HincII GTYRAC 2 cut(s) 791, 1831
HindII GTYRAC 2 cut(s) 791, 1831
HinfI GANTC 8 cut(s) 185, 299, 552, 724, 1193, 1427, 1454, 1466
HpaI GTTAAC 1 cut(s) 1831
HpaII CCGG 5 cut(s) 12, 328, 493, 1517, 1572
HphI GGTGA 2 cut(s) 607, 1532
Hpy166II GTNNAC 9 cut(s) 337, 343, 598, 743, 775, 791, 1523, 1700, 1831
Hpy188III TCNNGA 5 cut(s) 565, 1154, 1431, 1494, 1811
Hpy8I GTNNAC 9 cut(s) 337, 343, 598, 743, 775, 791, 1523, 1700, 1831
Hpy99I CGWCG 9 cut(s) 61, 64, 67, 80, 137, 143, 146, 176, 246
HpyAV CCTTC 6 cut(s) 571, 639, 860, 1335, 1482, 1796
HpyCH4III ACNGT 6 cut(s) 376, 795, 929, 1527, 1772, 1835
HpyCH4IV ACGT 4 cut(s) 59, 150, 250, 339
HpyCH4V TGCA 7 cut(s) 93, 932, 988, 1148, 1462, 1655, 1732
HpyF3I CTNAG 3 cut(s) 158, 401, 1659
HpySE526I ACGT 4 cut(s) 59, 150, 250, 339
Hsp92I GRCGYC 3 cut(s) 59, 132, 345
Hsp92II CATG 6 cut(s) 112, 752, 891, 1148, 1583, 1630
HspAI GCGC 7 cut(s) 9, 231, 236, 291, 354, 383, 424
KroI GCCGGC 1 cut(s) 11
KroNI GCCGGC 1 cut(s) 13
KspAI GTTAAC 1 cut(s) 1831
Kzo9I GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
LmnI GCTCC 8 cut(s) 72, 112, 207, 330, 761, 783, 1090, 1166
Lsp1109I GCAGC 6 cut(s) 18, 250, 622, 658, 1667, 1699
LweI GCATC 3 cut(s) 24, 102, 891
MaeI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
MaeII ACGT 4 cut(s) 59, 150, 250, 339
MaeIII GTNAC 4 cut(s) 79, 677, 1636, 1766
MalI GATC 9 cut(s) 22, 182, 365, 523, 569, 1264, 1386, 1650, 1705
MbiI CCGCTC 1 cut(s) 305
MboI GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
MboII GAAGA 7 cut(s) 956, 988, 1263, 1321, 1373, 1436, 1755
MflI RGATCY 3 cut(s) 20, 521, 1648
MhlI GDGCHC 4 cut(s) 150, 204, 327, 703
MluCI AATT 5 cut(s) 717, 1127, 1228, 1751, 1868
MlyI GAGTC 5 cut(s) 194, 293, 1202, 1421, 1475
MmeI TCCRAC 4 cut(s) 777, 1500, 1772, 1779
MroNI GCCGGC 1 cut(s) 11
MroXI GAANNNNTTC 1 cut(s) 717
MseI TTAA 5 cut(s) 1130, 1394, 1529, 1599, 1830
MspA1I CMGCKG 2 cut(s) 197, 1354
MspI CCGG 5 cut(s) 12, 328, 493, 1517, 1572
MspR9I CCNGG 4 cut(s) 494, 759, 1518, 1572
MteI GCGCNGCGC 1 cut(s) 234
Mva1269I GAATGC 1 cut(s) 736
MvaI CCWGG 1 cut(s) 759
MvnI CGCG 6 cut(s) 218, 231, 236, 291, 354, 424
NaeI GCCGGC 1 cut(s) 13
NciI CCSGG 3 cut(s) 494, 1518, 1572
NcoI CCATGG 1 cut(s) 108
NdeII GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
NgoMIV GCCGGC 1 cut(s) 11
NlaIII CATG 6 cut(s) 112, 752, 891, 1148, 1583, 1630
NlaIV GGNNCC 4 cut(s) 22, 326, 491, 1616
NmeAIII GCCGAG 1 cut(s) 382
NmuCI GTSAC 3 cut(s) 79, 677, 1766
NspI RCATGY 1 cut(s) 752
PcsI WCGNNNNNNNCGW 3 cut(s) 141, 147, 180
PctI GAATGC 1 cut(s) 736
PdiI GCCGGC 1 cut(s) 13
PdmI GAANNNNTTC 1 cut(s) 717
PfeI GAWTC 3 cut(s) 552, 724, 1454
PflFI GACNNNGTC 1 cut(s) 61
PleI GAGTC 5 cut(s) 193, 293, 1201, 1421, 1474
PmaCI CACGTG 1 cut(s) 340
PmlI CACGTG 1 cut(s) 340
PpsI GAGTC 5 cut(s) 193, 293, 1201, 1421, 1474
Ppu21I YACGTR 1 cut(s) 340
Psp6I CCWGG 1 cut(s) 757
PspCI CACGTG 1 cut(s) 340
PspFI CCCAGC 1 cut(s) 842
PspGI CCWGG 1 cut(s) 757
PspN4I GGNNCC 4 cut(s) 22, 326, 491, 1616
PspPI GGNCC 1 cut(s) 869
PstI CTGCAG 1 cut(s) 1657
PstNI CAGNNNCTG 1 cut(s) 727
PsuI RGATCY 3 cut(s) 20, 521, 1648
PsyI GACNNNGTC 1 cut(s) 61
RsaI GTAC 3 cut(s) 221, 835, 1345
RsaNI GTAC 3 cut(s) 220, 834, 1344
SaqAI TTAA 5 cut(s) 1130, 1394, 1529, 1599, 1830
Sau3AI GATC 9 cut(s) 20, 180, 363, 521, 567, 1262, 1384, 1648, 1703
Sau96I GGNCC 1 cut(s) 869
SchI GAGTC 5 cut(s) 194, 293, 1202, 1421, 1475
ScrFI CCNGG 4 cut(s) 494, 759, 1518, 1572
SduI GDGCHC 4 cut(s) 150, 204, 327, 703
SfaNI GCATC 3 cut(s) 24, 102, 891
SfcI CTRYAG 3 cut(s) 1449, 1653, 1834
SmlI CTYRAG 1 cut(s) 1429
SmoI CTYRAG 1 cut(s) 1429
Sse9I AATT 5 cut(s) 717, 1127, 1228, 1751, 1868
SspMI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
StyD4I CCNGG 4 cut(s) 492, 757, 1516, 1570
StyI CCWWGG 3 cut(s) 108, 274, 1188
TaaI ACNGT 6 cut(s) 376, 795, 929, 1527, 1772, 1835
TaiI ACGT 4 cut(s) 62, 153, 253, 342
TaqI TCGA 3 cut(s) 96, 144, 183
TaqII GACCGA 1 cut(s) 1230
TasI AATT 5 cut(s) 717, 1127, 1228, 1751, 1868
TauI GCSGC 7 cut(s) 165, 236, 314, 469, 530, 533, 874
TfiI GAWTC 3 cut(s) 552, 724, 1454
Tru1I TTAA 5 cut(s) 1130, 1394, 1529, 1599, 1830
Tru9I TTAA 5 cut(s) 1130, 1394, 1529, 1599, 1830
TscAI CASTG 3 cut(s) 577, 934, 1851
TseFI GTSAC 3 cut(s) 79, 677, 1766
TseI GCWGC 6 cut(s) 6, 238, 635, 671, 1655, 1712
Tsp45I GTSAC 3 cut(s) 79, 677, 1766
TspDTI ATGAA 6 cut(s) 683, 726, 1080, 1086, 1335, 1568
TspGWI ACGGA 1 cut(s) 615
TspRI CASTG 3 cut(s) 577, 934, 1851
Tth111I GACNNNGTC 1 cut(s) 61
XapI RAATTY 2 cut(s) 1228, 1751
XbaI TCTAGA 1 cut(s) 1493
XceI RCATGY 1 cut(s) 752
XmnI GAANNNNTTC 1 cut(s) 717
XspI CTAG 6 cut(s) 392, 549, 1200, 1331, 1494, 1619
ZraI GACGTC 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.