Prupe.2G176300_v2.0.a1

C-terminal binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0001355
Physical Location & Seq
Reverse (-)
22163413 .. 22168608
5196 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G176300.1

Sequence Viewer

Length: 1992 bp
ATGCCCAAACTTACAATCATAAACCCTAACCCGCCACCACCAACCCAAACGATGAGCGCCAGCACCGGTCTCAGATCCCCTGCGACAATGCCCCACCGTAGCAGCCCTACGACCTCACCCTCATCGCTCCCCCTGGTCGTCACTCTCAACTGCATCGATGACTTCGCCATGGAGCAAGACTCCTTGTCCGGCGTCGCCGCCGTCGAGCACGTGCCGCTCAGTCGTCTTGCCGACGGAAGGATCGAGTCGGCATCCGCCGTGCTCCTACAGTCCCTTGCCTACCTCCCACGCGCCGCCCAGCGCCGCCTCCGGCCCTACCAGCTCATCCTCTGCCTCGGCTCAGCCGACCGCGCCGTCGATTCGGCCTTGGCCGCCGACCTCGGTCTCCGGCTCGTCCACGTAGATACATCGCGCGCCGAGGAGATCGCCGACACGGTCATGGCGCTCTTCCTCGGCTTGCTGCGCCGTACGCACATGCTCTCCCGCCACGCACTCTCGGCTTCAGGGTGGCTTGGTTCGATCCAGCCGCTGTGCCGTGGGATGAGAAGGTGTCGTGGTTTGGTTTTGGGGATTATCGGTAGATCTGCGTCGGCGAGGTCTCTGGCTACTAGGAGCTTGGCTTTCAAAATGAGTGTGCTCTATTTCGATGTTCAAGATGTAGAGGTGAACGGAAAAGTGAGCAGGTCTTCCATAAGCTTTCCTTCTGCTGCCCGAAGAATGGATACTCTTAATGATTTACTGGCTGCAAGTGACCTTGTTTCACTTCACTGTTCTCTGACAAATGAAACAGTTCAGATTCTCAATGCTGAATGTTTACAGCACGTAAAGCCTGGAGCATTTCTTGTAAACACGGGGAGCAGTCAGCTATTGGATGATTGTTTTGTGAAACAGCTTTTGATTGATGGAACCTTAGCTGGGTGTGCTTTGGATGGTGCTGAAGGCCCACAATGGATGGAAGCATGGGTAAAGGAGATGCCCAATGTTTTGATACTTCCACACAGTGCAGATTATAGTGAAGAAGTATGGTTGGAAATAAGGGAGAAAGCTATCTCCATATTGCAGTCATTCTTCTTTGATGGGATTGTTCCAAAAAATGCTGTATCGGATGAAGAGGATGAAAGTGAAATAGGTGATGAAAATGAAGGGTCAGATAAACTGGACAGAGAAAGTAGCTTGCAGCTATCCGTTGTTGAGCAACCAACTGAAGTCATTCATGCAAGTCCAGAAAGCTCTCAGAAGAAAGAAGCTAATCAATCCAAGGAGTCTCCTAGCCAGCACCAAGGTTCAGGTTTGTCTCAAAGTACTGCCACTCGATCTGATGGAAGACGAGGCAGAGCAGGTAAGAAAGCCAAAAAGAGGCACGCACATCAAAAATCCAGGCAAAAATCCGATGACCCTTCACAAGAAAAAGAAAGTACCTCGCAGCGGGAAGAAGACACGGCTATGAGTGGCACTGATCAAGCATTAAGCTCCAGCTCTCGGTTTGCCTCCCCAGAAGACTTAAGAAGTAGGAAAACTCCCATAGAATCAATGCAAGAATCTCCTTCCGACCAGCTTCTAAAATCTAGCCGGAGGCTCAGTGGAAAGCCTGGTGAGCTGTTGAAGGATGGGTATGTTGTATCTTTGTATGCAAGAGATCGTCCTGCTCTCCATGTTGCAAGGCAAAGAGTTAAAGGTGGTGGTTGGTTCCTAGATACTATGTCAAATGTATCGAAAAGAGATCCAGCAGCTCAGTTCCTCATTGTTTCAAGAAGCAAGGACACAATTGGTTTGCGATCTTTTGCTGCTGGTGGAAAGTTACTGCAGATAAATAGAAGAATGGAATTTGTATTTGCCAGTCACAGTTTTGATGTCTGGGAGAGTTGGATGTTGGAAGGTTCTCTGGAGGAATGTAGGCTGGTTAACTGTAGAAATCCGTTGGCTGTTTTGGAAGTAAGCATCGAGATTCTGGCCACCATAGGGGAAGATGGGGTTACACGCTGGCTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008360 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010482 GO:0010494 GO:0010769 GO:0012505 GO:0016043 GO:0016049 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030856 GO:0031128 GO:0031129 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0040007 GO:0042802 GO:0042803 GO:0042814 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0046983 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048468 GO:0048530 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051302 GO:0060284 GO:0060560 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071826 GO:0071840 GO:0090558 GO:0090567 GO:0090626 GO:0090696 GO:0090697 GO:0090698 GO:0098791 GO:0099402 GO:1905392 GO:1990904 GO:2000024 GO:2000026 GO:2000039
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2-Hacid_dh_C

Protein Analysis

664

Amino Acids

72.53

Weight (kDa)

6.22

Isoelectric Point (pI)

67.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 353
Acc36I ACCTGC 2 cut(s) 672, 1328
AccBSI CCGCTC 1 cut(s) 217
AccII CGCG 4 cut(s) 291, 351, 412, 414
AclWI GGATC 4 cut(s) 69, 248, 514, 1715
AcoI YGGCCR 2 cut(s) 369, 1950
AcsI RAATTY 1 cut(s) 1823
AcuI CTGAAG 3 cut(s) 486, 957, 1224
AcvI CACGTG 1 cut(s) 211
AcyI GRCGYC 1 cut(s) 192
AdeI CACNNNGTG 1 cut(s) 1001
AfaI GTAC 3 cut(s) 469, 1303, 1417
AfiI CCNNNNNNNGG 7 cut(s) 237, 718, 915, 1356, 1425, 1479, 1959
AflII CTTAAG 1 cut(s) 1501
AgeI ACCGGT 1 cut(s) 65
AgsI TTSAA 4 cut(s) 625, 653, 1603, 1749
AhdI GACNNNNNGTC 1 cut(s) 184
AjnI CCWGG 4 cut(s) 132, 829, 1376, 1588
Alw21I GWGCWC 3 cut(s) 210, 264, 639
Alw26I GTCTC 5 cut(s) 74, 389, 603, 1269, 1299
AlwI GGATC 4 cut(s) 69, 248, 514, 1715
AlwNI CAGNNNCTG 1 cut(s) 529
AoxI GGCC 5 cut(s) 311, 363, 369, 940, 1950
ApeKI GCWGC 8 cut(s) 102, 460, 707, 743, 1177, 1423, 1727, 1784
ApoI RAATTY 1 cut(s) 1823
AsiGI ACCGGT 1 cut(s) 65
Asp700I GAANNNNTTC 2 cut(s) 789, 1209
AspLEI GCGC 8 cut(s) 59, 293, 303, 353, 414, 416, 445, 465
AspS9I GGNCC 2 cut(s) 312, 941
AsuHPI GGTGA 4 cut(s) 108, 676, 1142, 1604
BalI TGGCCA 1 cut(s) 1952
BarI GAAGNNNNNNTAC 2 cut(s) 706, 738
BbrPI CACGTG 1 cut(s) 211
BbsI GAAGAC 4 cut(s) 678, 1330, 1440, 1503
Bbv12I GWGCWC 3 cut(s) 210, 264, 639
BbvI GCAGC 8 cut(s) 114, 447, 694, 730, 1189, 1435, 1739, 1771
BccI CCATC 7 cut(s) 896, 923, 946, 1070, 1313, 1601, 1961
BceAI ACGGC 6 cut(s) 185, 242, 338, 450, 519, 1455
BciT130I CCWGG 4 cut(s) 134, 831, 1378, 1590
BciVI GTATCC 1 cut(s) 715
BclI TGATCA 1 cut(s) 1456
BcoDI GTCTC 5 cut(s) 74, 389, 603, 1269, 1299
BfaI CTAG 4 cut(s) 609, 1269, 1566, 1691
BfmI CTRYAG 3 cut(s) 266, 1802, 1906
BfoI RGCGCY 3 cut(s) 60, 304, 446
BfrI CTTAAG 1 cut(s) 1501
BfuAI ACCTGC 2 cut(s) 672, 1328
BfuI GTATCC 1 cut(s) 715
BglII AGATCT 1 cut(s) 581
BlpI GCTNAGC 1 cut(s) 340
BmcAI AGTACT 1 cut(s) 1303
Bme1390I CCNGG 4 cut(s) 134, 831, 1378, 1590
BmeRI GACNNNNNGTC 1 cut(s) 184
BmgT120I GGNCC 2 cut(s) 312, 941
BmiI GGNNCC 2 cut(s) 907, 1688
BmrFI CCNGG 4 cut(s) 134, 831, 1378, 1590
BmsI GCATC 4 cut(s) 162, 260, 963, 1947
BoxI GACNNNNGTC 1 cut(s) 381
BpiI GAAGAC 4 cut(s) 678, 1330, 1440, 1503
BplI GAGNNNNNCTC 2 cut(s) 164, 196
BpmI CTGGAG 3 cut(s) 852, 1456, 1904
Bpu10I CCTNAGC 1 cut(s) 910
Bpu1102I GCTNAGC 1 cut(s) 340
Bsa29I ATCGAT 1 cut(s) 156
BsaAI YACGTR 3 cut(s) 211, 400, 823
BsaHI GRCGYC 1 cut(s) 192
BsaI GGTCTC 3 cut(s) 74, 389, 603
BsaWI WCCGGW 1 cut(s) 65
BsaXI ACNNNNNCTCC 4 cut(s) 464, 494, 1564, 1594
Bsc4I CCNNNNNNNGG 7 cut(s) 237, 718, 915, 1356, 1425, 1479, 1959
Bse118I RCCGGY 1 cut(s) 65
Bse1I ACTGG 3 cut(s) 744, 1161, 1836
BseBI CCWGG 4 cut(s) 134, 831, 1378, 1590
BseCI ATCGAT 1 cut(s) 156
BseLI CCNNNNNNNGG 7 cut(s) 237, 718, 915, 1356, 1425, 1479, 1959
BseMII CTCAG 6 cut(s) 85, 232, 354, 1247, 1591, 1745
BseNI ACTGG 3 cut(s) 744, 1161, 1836
BsePI GCGCGC 1 cut(s) 412
BseRI GAGGAG 1 cut(s) 434
BseXI GCAGC 8 cut(s) 114, 447, 694, 730, 1189, 1435, 1739, 1771
BseYI CCCAGC 2 cut(s) 297, 914
BsgI GTGCAG 1 cut(s) 1023
Bsh1236I CGCG 4 cut(s) 291, 351, 412, 414
Bsh1285I CGRYCG 1 cut(s) 349
BshFI GGCC 5 cut(s) 313, 365, 371, 942, 1952
BshTI ACCGGT 1 cut(s) 65
BshVI ATCGAT 1 cut(s) 156
BsiEI CGRYCG 1 cut(s) 349
BsiHKAI GWGCWC 3 cut(s) 210, 264, 639
BsiSI CCGG 5 cut(s) 66, 189, 310, 388, 1570
BsiWI CGTACG 1 cut(s) 467
BslFI GGGAC 1 cut(s) 256
BslI CCNNNNNNNGG 7 cut(s) 237, 718, 915, 1356, 1425, 1479, 1959
BsmAI GTCTC 5 cut(s) 74, 389, 603, 1269, 1299
BsmFI GGGAC 1 cut(s) 256
BsnI GGCC 5 cut(s) 313, 365, 371, 942, 1952
Bso31I GGTCTC 3 cut(s) 74, 389, 603
Bsp1286I GDGCHC 3 cut(s) 210, 264, 639
Bsp1720I GCTNAGC 1 cut(s) 340
Bsp19I CCATGG 1 cut(s) 168
BspANI GGCC 5 cut(s) 313, 365, 371, 942, 1952
BspCNI CTCAG 6 cut(s) 84, 231, 353, 1246, 1590, 1744
BspDI ATCGAT 1 cut(s) 156
BspFNI CGCG 4 cut(s) 291, 351, 412, 414
BspLI GGNNCC 2 cut(s) 907, 1688
BspMAI CTGCAG 1 cut(s) 1806
BspMI ACCTGC 2 cut(s) 672, 1328
BspPI GGATC 4 cut(s) 69, 248, 514, 1715
BspQI GCTCTTC 1 cut(s) 452
BspTI CTTAAG 1 cut(s) 1501
BspTNI GGTCTC 3 cut(s) 74, 389, 603
BsrBI CCGCTC 1 cut(s) 217
BsrFI RCCGGY 1 cut(s) 65
BsrI ACTGG 3 cut(s) 744, 1161, 1836
BssAI RCCGGY 1 cut(s) 65
BssHII GCGCGC 1 cut(s) 412
BssNI GRCGYC 1 cut(s) 192
BssT1I CCWWGG 4 cut(s) 168, 366, 1257, 1279
Bst2UI CCWGG 4 cut(s) 134, 831, 1378, 1590
Bst4CI ACNGT 8 cut(s) 98, 270, 436, 770, 790, 1001, 1844, 1907
Bst6I CTCTTC 2 cut(s) 452, 1104
BstACI GRCGYC 1 cut(s) 192
BstAFI CTTAAG 1 cut(s) 1501
BstBAI YACGTR 3 cut(s) 211, 400, 823
BstC8I GCNNGC 7 cut(s) 61, 414, 458, 1175, 1274, 1362, 1982
BstDEI CTNAG 7 cut(s) 71, 218, 340, 910, 1233, 1577, 1731
BstDSI CCRYGG 2 cut(s) 168, 535
BstFNI CGCG 4 cut(s) 291, 351, 412, 414
BstH2I RGCGCY 3 cut(s) 60, 304, 446
BstHHI GCGC 8 cut(s) 59, 293, 303, 353, 414, 416, 445, 465
BstMAI GTCTC 5 cut(s) 74, 389, 603, 1269, 1299
BstMCI CGRYCG 1 cut(s) 349
BstNI CCWGG 4 cut(s) 134, 831, 1378, 1590
BstNSI RCATGY 1 cut(s) 478
BstPAI GACNNNNGTC 1 cut(s) 381
BstSCI CCNGG 4 cut(s) 132, 829, 1376, 1588
BstSFI CTRYAG 3 cut(s) 266, 1802, 1906
BstUI CGCG 4 cut(s) 291, 351, 412, 414
BstV1I GCAGC 8 cut(s) 114, 447, 694, 730, 1189, 1435, 1739, 1771
BstV2I GAAGAC 4 cut(s) 678, 1330, 1440, 1503
BstX2I RGATCY 3 cut(s) 74, 581, 1720
BstYI RGATCY 3 cut(s) 74, 581, 1720
Bsu15I ATCGAT 1 cut(s) 156
BsuI GTATCC 1 cut(s) 715
BsuRI GGCC 5 cut(s) 313, 365, 371, 942, 1952
BsuTUI ATCGAT 1 cut(s) 156
BtgI CCRYGG 2 cut(s) 168, 535
BtgZI GCGATG 2 cut(s) 108, 393
BtsIMutI CAGTG 4 cut(s) 766, 1006, 1452, 1585
BveI ACCTGC 2 cut(s) 672, 1328
Cac8I GCNNGC 7 cut(s) 61, 414, 458, 1175, 1274, 1362, 1982
CaiI CAGNNNCTG 1 cut(s) 529
CfoI GCGC 8 cut(s) 59, 293, 303, 353, 414, 416, 445, 465
Cfr10I RCCGGY 1 cut(s) 65
Cfr13I GGNCC 2 cut(s) 312, 941
ClaI ATCGAT 1 cut(s) 156
CseI GACGC 2 cut(s) 181, 576
Csp6I GTAC 3 cut(s) 468, 1302, 1416
CspAI ACCGGT 1 cut(s) 65
CviAII CATG 6 cut(s) 169, 439, 475, 960, 1214, 1652
CviQI GTAC 3 cut(s) 468, 1302, 1416
DdeI CTNAG 7 cut(s) 71, 218, 340, 910, 1233, 1577, 1731
DraIII CACNNNGTG 1 cut(s) 1001
DrdI GACNNNNNNGTC 1 cut(s) 353
DriI GACNNNNNGTC 1 cut(s) 184
DseDI GACNNNNNNGTC 1 cut(s) 353
EaeI YGGCCR 2 cut(s) 369, 1950
Eam1104I CTCTTC 2 cut(s) 452, 1104
Eam1105I GACNNNNNGTC 1 cut(s) 184
EarI CTCTTC 2 cut(s) 452, 1104
EciI GGCGGA 1 cut(s) 244
Eco130I CCWWGG 4 cut(s) 168, 366, 1257, 1279
Eco31I GGTCTC 3 cut(s) 74, 389, 603
Eco57I CTGAAG 3 cut(s) 486, 957, 1224
Eco72I CACGTG 1 cut(s) 211
EcoRII CCWGG 4 cut(s) 132, 829, 1376, 1588
EcoT14I CCWWGG 4 cut(s) 168, 366, 1257, 1279
ErhI CCWWGG 4 cut(s) 168, 366, 1257, 1279
FaeI CATG 6 cut(s) 172, 442, 478, 963, 1217, 1655
FalI AAGNNNNNCTT 2 cut(s) 685, 717
FaqI GGGAC 1 cut(s) 256
FatI CATG 6 cut(s) 168, 438, 474, 959, 1213, 1651
FauI CCCGC 3 cut(s) 39, 491, 1419
FbaI TGATCA 1 cut(s) 1456
FspBI CTAG 4 cut(s) 609, 1269, 1566, 1691
GlaI GCGC 8 cut(s) 58, 292, 302, 352, 413, 415, 444, 464
GsaI CCCAGC 2 cut(s) 301, 918
GsuI CTGGAG 3 cut(s) 852, 1456, 1904
HaeII RGCGCY 3 cut(s) 60, 304, 446
HaeIII GGCC 5 cut(s) 313, 365, 371, 942, 1952
HapII CCGG 5 cut(s) 66, 189, 310, 388, 1570
HgaI GACGC 2 cut(s) 181, 576
HhaI GCGC 8 cut(s) 59, 293, 303, 353, 414, 416, 445, 465
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 6 cut(s) 172, 442, 478, 963, 1217, 1655
Hin6I GCGC 8 cut(s) 57, 291, 301, 351, 412, 414, 443, 463
HinP1I GCGC 8 cut(s) 57, 291, 301, 351, 412, 414, 443, 463
HincII GTYRAC 1 cut(s) 1903
HindII GTYRAC 1 cut(s) 1903
HindIII AAGCTT 1 cut(s) 694
HinfI GANTC 8 cut(s) 179, 245, 359, 796, 1262, 1526, 1538, 1945
HpaI GTTAAC 1 cut(s) 1903
HpaII CCGG 5 cut(s) 66, 189, 310, 388, 1570
HphI GGTGA 4 cut(s) 108, 676, 1142, 1604
Hpy166II GTNNAC 5 cut(s) 397, 667, 815, 847, 1903
Hpy188I TCNGA 9 cut(s) 74, 777, 795, 1105, 1150, 1236, 1318, 1390, 1549
Hpy188III TCNNGA 5 cut(s) 653, 1223, 1749, 1883, 1942
Hpy8I GTNNAC 5 cut(s) 397, 667, 815, 847, 1903
Hpy99I CGWCG 5 cut(s) 197, 206, 236, 359, 592
HpyAV CCTTC 9 cut(s) 231, 540, 711, 932, 1136, 1407, 1554, 1597, 1868
HpyCH4III ACNGT 8 cut(s) 98, 270, 436, 770, 790, 1001, 1844, 1907
HpyCH4IV ACGT 3 cut(s) 210, 399, 822
HpyF3I CTNAG 7 cut(s) 71, 218, 340, 910, 1233, 1577, 1731
HpySE526I ACGT 3 cut(s) 210, 399, 822
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 6 cut(s) 172, 442, 478, 963, 1217, 1655
HspAI GCGC 8 cut(s) 57, 291, 301, 351, 412, 414, 443, 463
Ksp22I TGATCA 1 cut(s) 1456
KspAI GTTAAC 1 cut(s) 1903
LguI GCTCTTC 1 cut(s) 452
LmnI GCTCC 7 cut(s) 132, 172, 267, 612, 833, 855, 1475
Lsp1109I GCAGC 8 cut(s) 114, 447, 694, 730, 1189, 1435, 1739, 1771
LweI GCATC 4 cut(s) 162, 260, 963, 1947
MaeI CTAG 4 cut(s) 609, 1269, 1566, 1691
MaeII ACGT 3 cut(s) 210, 399, 822
MaeIII GTNAC 5 cut(s) 139, 749, 1797, 1838, 1972
MbiI CCGCTC 1 cut(s) 217
MfeI CAATTG 1 cut(s) 1764
MflI RGATCY 3 cut(s) 74, 581, 1720
MhlI GDGCHC 3 cut(s) 210, 264, 639
MlsI TGGCCA 1 cut(s) 1952
MluCI AATT 2 cut(s) 1764, 1823
MluNI TGGCCA 1 cut(s) 1952
MlyI GAGTC 3 cut(s) 173, 254, 1271
MmeI TCCRAC 4 cut(s) 1008, 1572, 1844, 1851
Mox20I TGGCCA 1 cut(s) 1952
MroXI GAANNNNTTC 2 cut(s) 789, 1209
MscI TGGCCA 1 cut(s) 1952
MseI TTAA 5 cut(s) 729, 1466, 1502, 1671, 1902
MslI CAYNNNNRTG 2 cut(s) 437, 1442
Msp20I TGGCCA 1 cut(s) 1952
MspA1I CMGCKG 2 cut(s) 529, 1426
MspCI CTTAAG 1 cut(s) 1501
MspI CCGG 5 cut(s) 66, 189, 310, 388, 1570
MspR9I CCNGG 4 cut(s) 134, 831, 1378, 1590
MunI CAATTG 1 cut(s) 1764
MvaI CCWGG 4 cut(s) 134, 831, 1378, 1590
MvnI CGCG 4 cut(s) 291, 351, 412, 414
NcoI CCATGG 1 cut(s) 168
NlaIII CATG 6 cut(s) 172, 442, 478, 963, 1217, 1655
NlaIV GGNNCC 2 cut(s) 907, 1688
NmeAIII GCCGAG 4 cut(s) 315, 432, 442, 476
NmuCI GTSAC 3 cut(s) 139, 749, 1838
NspI RCATGY 1 cut(s) 478
PauI GCGCGC 1 cut(s) 412
PciSI GCTCTTC 1 cut(s) 452
PcsI WCGNNNNNNNCGW 3 cut(s) 201, 240, 342
PdmI GAANNNNTTC 2 cut(s) 789, 1209
PfeI GAWTC 5 cut(s) 359, 796, 1526, 1538, 1945
Pfl23II CGTACG 1 cut(s) 467
PflFI GACNNNGTC 1 cut(s) 434
PinAI ACCGGT 1 cut(s) 65
PleI GAGTC 3 cut(s) 173, 253, 1270
PmaCI CACGTG 1 cut(s) 211
PmlI CACGTG 1 cut(s) 211
PpsI GAGTC 3 cut(s) 173, 253, 1270
Ppu21I YACGTR 3 cut(s) 211, 400, 823
PshAI GACNNNNGTC 1 cut(s) 381
Psp6I CCWGG 4 cut(s) 132, 829, 1376, 1588
PspCI CACGTG 1 cut(s) 211
PspFI CCCAGC 2 cut(s) 297, 914
PspGI CCWGG 4 cut(s) 132, 829, 1376, 1588
PspLI CGTACG 1 cut(s) 467
PspN4I GGNNCC 2 cut(s) 907, 1688
PspPI GGNCC 2 cut(s) 312, 941
PstI CTGCAG 1 cut(s) 1806
PstNI CAGNNNCTG 1 cut(s) 529
PsuI RGATCY 3 cut(s) 74, 581, 1720
PsyI GACNNNGTC 1 cut(s) 434
PteI GCGCGC 1 cut(s) 412
RsaI GTAC 3 cut(s) 469, 1303, 1417
RsaNI GTAC 3 cut(s) 468, 1302, 1416
RseI CAYNNNNRTG 2 cut(s) 437, 1442
SapI GCTCTTC 1 cut(s) 452
SaqAI TTAA 5 cut(s) 729, 1466, 1502, 1671, 1902
Sau96I GGNCC 2 cut(s) 312, 941
ScaI AGTACT 1 cut(s) 1303
SchI GAGTC 3 cut(s) 173, 254, 1271
ScrFI CCNGG 4 cut(s) 134, 831, 1378, 1590
SduI GDGCHC 3 cut(s) 210, 264, 639
SfaNI GCATC 4 cut(s) 162, 260, 963, 1947
SfcI CTRYAG 3 cut(s) 266, 1802, 1906
SmiMI CAYNNNNRTG 2 cut(s) 437, 1442
SmlI CTYRAG 1 cut(s) 1501
SmoI CTYRAG 1 cut(s) 1501
Sse9I AATT 2 cut(s) 1764, 1823
SspMI CTAG 4 cut(s) 609, 1269, 1566, 1691
StyD4I CCNGG 4 cut(s) 132, 829, 1376, 1588
StyI CCWWGG 4 cut(s) 168, 366, 1257, 1279
TaaI ACNGT 8 cut(s) 98, 270, 436, 770, 790, 1001, 1844, 1907
TaiI ACGT 3 cut(s) 213, 402, 825
TaqI TCGA 9 cut(s) 156, 204, 243, 357, 518, 645, 1312, 1712, 1941
TaqII GACCGA 1 cut(s) 371
TasI AATT 2 cut(s) 1764, 1823
TatI WGTACW 1 cut(s) 1301
TauI GCSGC 6 cut(s) 200, 217, 296, 306, 374, 529
TfiI GAWTC 5 cut(s) 359, 796, 1526, 1538, 1945
Tru1I TTAA 5 cut(s) 729, 1466, 1502, 1671, 1902
Tru9I TTAA 5 cut(s) 729, 1466, 1502, 1671, 1902
TscAI CASTG 4 cut(s) 773, 1006, 1459, 1585
TseFI GTSAC 3 cut(s) 139, 749, 1838
TseI GCWGC 8 cut(s) 102, 460, 707, 743, 1177, 1423, 1727, 1784
Tsp45I GTSAC 3 cut(s) 139, 749, 1838
TspDTI ATGAA 6 cut(s) 798, 1122, 1131, 1149, 1155, 1202
TspGWI ACGGA 4 cut(s) 249, 684, 1174, 1905
TspRI CASTG 4 cut(s) 773, 1006, 1459, 1585
Tth111I GACNNNGTC 1 cut(s) 434
Vha464I CTTAAG 1 cut(s) 1501
XapI RAATTY 1 cut(s) 1823
XceI RCATGY 1 cut(s) 478
XmnI GAANNNNTTC 2 cut(s) 789, 1209
XspI CTAG 4 cut(s) 609, 1269, 1566, 1691
ZrmI AGTACT 1 cut(s) 1303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.