Rh1AG271100

C-terminal binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0001355
Physical Location & Seq
Forward (+)
49935124 .. 49939309
4186 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG271100.1

Sequence Viewer

Length: 1914 bp
ATGAGCAGCGCCGGCATCGGATCCCCCGCCACAATGTCCCACCGCACCACCCAAACGACGTCGTCGCTCCCCCTCGTCGTCACTCTCAACTGCATCGACGACTTCGCCATGGAGCAAGACTGCTTGTCCGGCGTCGCCGCCGTCGAGCACGTCCCTCTCAGCCGCTTGGCCGACGGCAGGATCGAGTCCGCCTCCGCTGTGCTCCTCCAGTCCCTCGCGTACCTCCCACGCGCCGCCCAGCGCCGGCTTCGTCCTTACCAGCTCATCCTCTGCCTTGGCTCCGCCGACCGCGCCACTGACTCCGCTCTCGCCGCCGACCTCGGGCTCCGGCTCGTACACGTGGACGCCTCCCGCGCCGAGGAGATCGCCGATACGGTTATGGCGCTGTTTCTAGGGTTGCTGAGGAGGACGCACTTGCTCTCGCGCCAAACGCTTTCGGCTTCGGGGTGGCTTGGTTCGGTTCAGCCGCTTTGCCGTGGGATGAGGCGGTGCCGGGGCTTGGTTTTGGGGATTATTGGTAGATCTGCGGCGGCGAGGTCTCTGGCTACTAGAAGCTTGGCCTTCAAGATCAGTGTGCTGTATTTTGATGTAGAGGTGAACGGAAAAGTGAGTAGGTCTTATGGCTTTCCTTCTGCTGCCCGAAAGATGGATACTCTAAATGACTTACTTGCTGCGAGTGACCTCATTTCGCTTCATTGTGCTCTGACAAATGAAACAATTCAGATTCTGAATGCTGAATGTTTACAGCACGTAAAGCCTGGAGCATTTCTTGTAAACACGGGGAGCAGTCAACTGTTGGATGATTGTTTTGTGAAACAGCTTTTGATTGATGGAACTTTAGCTGGGTGTGCTTTGGATGGTGCTGAAGGGCCGCAATGGATGGAAGCATGGGTAAAGGAGATGCCCAATGTGTTGATACTTCCACACAGTGCAGATTATAGTGAAGAAGTATGGCTGGAGATAAGGGATAAGGCAATATCTGTATTGCAGACATTCTTCTTTGATGGGGTTGTTCCAAAAAATGTTGTATCTGATGAGGATGAGGAGGAAAGTGAAATAGGTGATGAAAATGAACACTCTGATAAACTGGAGCAAGAAAATCCCTTACAGCTAACCCTTGTTCAGCAATTAACTGATGCAAGTCCAGAAAGCTCCCTGCATAAAGAAACCAATCAATCCAAGGAGTCTCCTAGCCAGCAAGGTTCGGGTTTGTCTCAAAATTCAACTACTCGGTCCGATGGAAGACGAAGTAGATCAGGTAAGAAAGCCAAAAAGAGGCACACACATCAGAAATCCCAGAAGAAATCAGATGAACCTTCACTAGCAAAAGAAAGTACCTCACAGCGGGAGGAAGATACGACTATGAGTGGCACAGATCAAGCGTTAAGTTCCAGTTCTCGGTTTGCTTCCCCCGAAGACTCAAGAAGTAGGAAAACACCTATAGAATCAATGCAAGAGTCGCCTTCCAACCAGCTTCTAAAATCTAGAAAGAGGCTGAGTGGAAAGCCTGGTGAACTGTTAAAGGATGGCTATGTTGTAGCTCTATATGCAAGAGATAGCCCCGGTCTTCATGTTGCAAGGCAAAGAGTTAAAGGTGGTGGTTGGTTCCTAGATACCATGTCAAATGTAACGAAAAGAGATCCTGCAGTTCAGTTCCTCATTGTAATCAGAAGCAAGGATACCATTGGTTTGCGATCTTTTGCTGCTGGTGGAAAGTTATTGCAGATAAATAGAAGAATGGAATTTGTATTTGCAAGTCACAGTTTTGATGTTTGGGAGAGTTGGATGTTGGAAGGTTCTCTGGACGAGTGTAGGCTGGTTAACTGTAGAAATCCGCTGGCTGTTTTGGATGTAAGCATCGAGATACTAGCCACTGTAGGCGAAGATGATGGGGTAACACGCTGGCTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008360 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010482 GO:0010494 GO:0010769 GO:0012505 GO:0016043 GO:0016049 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030856 GO:0031128 GO:0031129 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0040007 GO:0042802 GO:0042803 GO:0042814 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0046983 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048468 GO:0048530 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051302 GO:0060284 GO:0060560 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071826 GO:0071840 GO:0090558 GO:0090567 GO:0090626 GO:0090696 GO:0090697 GO:0090698 GO:0098791 GO:0099402 GO:1905392 GO:1990904 GO:2000024 GO:2000026 GO:2000039
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2-Hacid_dh_C

Protein Analysis

637

Amino Acids

69.79

Weight (kDa)

5.99

Isoelectric Point (pI)

61.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2-Hacid_dh_C PF02826 127 - 311 1.7e-27 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 62
AccB1I GGYRCC 1 cut(s) 489
AccBSI CCGCTC 1 cut(s) 305
AccII CGCG 5 cut(s) 218, 231, 291, 354, 424
AclWI GGATC 4 cut(s) 15, 28, 188, 1634
AcoI YGGCCR 1 cut(s) 168
AcsI RAATTY 2 cut(s) 1219, 1742
AcuI CTGAAG 1 cut(s) 885
AcvI CACGTG 1 cut(s) 340
AcyI GRCGYC 3 cut(s) 59, 132, 345
AdeI CACNNNGTG 1 cut(s) 929
AfaI GTAC 3 cut(s) 221, 336, 1336
AfiI CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1275, 1344, 1398
AflIII ACRYGT 1 cut(s) 337
AgsI TTSAA 2 cut(s) 565, 1224
AhdI GACNNNNNGTC 1 cut(s) 124
AjiI CACGTC 1 cut(s) 151
AjnI CCWGG 2 cut(s) 757, 1507
AluBI AGCT 8 cut(s) 262, 555, 820, 842, 1111, 1152, 1474, 1541
AluI AGCT 8 cut(s) 262, 555, 820, 842, 1111, 1152, 1474, 1541
Alw21I GWGCWC 3 cut(s) 150, 204, 703
Alw26I GTCTC 3 cut(s) 543, 1191, 1218
AlwI GGATC 4 cut(s) 15, 28, 188, 1634
AlwNI CAGNNNCTG 1 cut(s) 727
Ama87I CYCGRG 1 cut(s) 320
AoxI GGCC 3 cut(s) 168, 558, 869
ApeKI GCWGC 4 cut(s) 6, 635, 671, 1703
ApoI RAATTY 2 cut(s) 1219, 1742
Asp700I GAANNNNTTC 1 cut(s) 717
AspLEI GCGC 7 cut(s) 11, 233, 243, 293, 356, 385, 426
AspS9I GGNCC 2 cut(s) 869, 1233
AsuC2I CCSGG 2 cut(s) 494, 1563
AsuHPI GGTGA 3 cut(s) 607, 1073, 1523
AvaI CYCGRG 1 cut(s) 320
AvaII GGWCC 1 cut(s) 1233
BamHI GGATCC 1 cut(s) 20
BanI GGYRCC 1 cut(s) 489
BanII GRGCYC 1 cut(s) 327
BarI GAAGNNNNNNTAC 2 cut(s) 1663, 1695
BbrPI CACGTG 1 cut(s) 340
BbsI GAAGAC 3 cut(s) 1249, 1422, 1559
Bbv12I GWGCWC 3 cut(s) 150, 204, 703
BbvCI CCTCAGC 1 cut(s) 401
BbvI GCAGC 4 cut(s) 18, 622, 658, 1690
BccI CCATC 8 cut(s) 640, 824, 851, 874, 998, 1232, 1520, 1883
BceAI ACGGC 3 cut(s) 125, 190, 459
BciT130I CCWGG 2 cut(s) 759, 1509
BciVI GTATCC 2 cut(s) 643, 1672
BcnI CCSGG 2 cut(s) 494, 1563
BcoDI GTCTC 3 cut(s) 543, 1191, 1218
BfaI CTAG 7 cut(s) 392, 549, 1191, 1322, 1485, 1610, 1868
BfmI CTRYAG 4 cut(s) 1440, 1644, 1825, 1875
BfoI RGCGCY 3 cut(s) 12, 244, 386
BfuI GTATCC 2 cut(s) 643, 1672
BglII AGATCT 1 cut(s) 521
Bme1390I CCNGG 4 cut(s) 494, 759, 1509, 1563
Bme18I GGWCC 1 cut(s) 1233
BmeRI GACNNNNNGTC 1 cut(s) 124
BmeT110I CYCGRG 1 cut(s) 320
BmgBI CACGTC 1 cut(s) 151
BmgT120I GGNCC 2 cut(s) 869, 1233
BmiI GGNNCC 5 cut(s) 22, 280, 326, 491, 1607
BmrFI CCNGG 4 cut(s) 494, 759, 1509, 1563
BmsI GCATC 5 cut(s) 24, 102, 891, 1126, 1866
BpiI GAAGAC 3 cut(s) 1249, 1422, 1559
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 4 cut(s) 191, 780, 977, 1109
Bpu10I CCTNAGC 1 cut(s) 401
BpuEI CTTGAG 1 cut(s) 1405
BpuMI CCSGG 2 cut(s) 494, 1563
BsaAI YACGTR 2 cut(s) 340, 751
BsaHI GRCGYC 3 cut(s) 59, 132, 345
BsaI GGTCTC 1 cut(s) 543
BsaJI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1179, 1561
Bsc4I CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1275, 1344, 1398
Bse118I RCCGGY 2 cut(s) 11, 243
Bse1I ACTGG 3 cut(s) 208, 1092, 1392
Bse3DI GCAATG 1 cut(s) 881
BseBI CCWGG 2 cut(s) 759, 1509
BseDI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1179, 1561
BseGI GGATG 9 cut(s) 264, 486, 805, 862, 885, 1045, 1531, 1791, 1855
BseLI CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1275, 1344, 1398
BseMI GCAATG 1 cut(s) 881
BseMII CTCAG 3 cut(s) 172, 392, 1487
BseNI ACTGG 3 cut(s) 208, 1092, 1392
BseRI GAGGAG 4 cut(s) 194, 374, 418, 1058
BseXI GCAGC 4 cut(s) 18, 622, 658, 1690
BseYI CCCAGC 2 cut(s) 237, 842
BsgI GTGCAG 1 cut(s) 951
Bsh1236I CGCG 5 cut(s) 218, 231, 291, 354, 424
Bsh1285I CGRYCG 1 cut(s) 289
BshFI GGCC 3 cut(s) 170, 560, 871
BshNI GGYRCC 1 cut(s) 489
BsiEI CGRYCG 1 cut(s) 289
BsiHKAI GWGCWC 3 cut(s) 150, 204, 703
BsiHKCI CYCGRG 1 cut(s) 320
BsiSI CCGG 6 cut(s) 12, 129, 244, 328, 493, 1563
BslFI GGGAC 3 cut(s) 22, 137, 196
BslI CCNNNNNNNGG 9 cut(s) 177, 243, 321, 358, 499, 646, 1275, 1344, 1398
BsmAI GTCTC 3 cut(s) 543, 1191, 1218
BsmFI GGGAC 3 cut(s) 22, 137, 196
BsmI GAATGC 1 cut(s) 736
BsnI GGCC 3 cut(s) 170, 560, 871
Bso31I GGTCTC 1 cut(s) 543
BsoBI CYCGRG 1 cut(s) 320
Bsp1286I GDGCHC 4 cut(s) 150, 204, 327, 703
Bsp143I GATC 9 cut(s) 20, 180, 363, 521, 567, 1253, 1375, 1639, 1694
Bsp19I CCATGG 1 cut(s) 108
BspANI GGCC 3 cut(s) 170, 560, 871
BspCNI CTCAG 3 cut(s) 171, 393, 1488
BspFNI CGCG 5 cut(s) 218, 231, 291, 354, 424
BspLI GGNNCC 5 cut(s) 22, 280, 326, 491, 1607
BspMAI CTGCAG 1 cut(s) 1648
BspPI GGATC 4 cut(s) 15, 28, 188, 1634
BspT107I GGYRCC 1 cut(s) 489
BspTNI GGTCTC 1 cut(s) 543
BsrBI CCGCTC 1 cut(s) 305
BsrDI GCAATG 1 cut(s) 881
BsrFI RCCGGY 2 cut(s) 11, 243
BsrI ACTGG 3 cut(s) 208, 1092, 1392
BssAI RCCGGY 2 cut(s) 11, 243
BssECI CCNNGG 8 cut(s) 108, 274, 319, 357, 475, 493, 1179, 1561
BssMI GATC 9 cut(s) 20, 180, 363, 521, 567, 1253, 1375, 1639, 1694
BssNI GRCGYC 3 cut(s) 59, 132, 345
BssT1I CCWWGG 3 cut(s) 108, 274, 1179
Bst2UI CCWGG 2 cut(s) 759, 1509
Bst4CI ACNGT 7 cut(s) 376, 795, 929, 1518, 1763, 1826, 1876
BstACI GRCGYC 3 cut(s) 59, 132, 345
BstBAI YACGTR 2 cut(s) 340, 751
BstC8I GCNNGC 5 cut(s) 13, 245, 1196, 1839, 1904
BstDEI CTNAG 3 cut(s) 158, 401, 1496
BstDSI CCRYGG 2 cut(s) 108, 475
BstF5I GGATG 9 cut(s) 264, 486, 805, 862, 885, 1045, 1531, 1791, 1855
BstFNI CGCG 5 cut(s) 218, 231, 291, 354, 424
BstH2I RGCGCY 3 cut(s) 12, 244, 386
BstHHI GCGC 7 cut(s) 11, 233, 243, 293, 356, 385, 426
BstKTI GATC 9 cut(s) 23, 183, 366, 524, 570, 1256, 1378, 1642, 1697
BstMAI GTCTC 3 cut(s) 543, 1191, 1218
BstMBI GATC 9 cut(s) 20, 180, 363, 521, 567, 1253, 1375, 1639, 1694
BstMCI CGRYCG 1 cut(s) 289
BstNI CCWGG 2 cut(s) 759, 1509
BstSCI CCNGG 4 cut(s) 492, 757, 1507, 1561
BstSFI CTRYAG 4 cut(s) 1440, 1644, 1825, 1875
BstUI CGCG 5 cut(s) 218, 231, 291, 354, 424
BstV1I GCAGC 4 cut(s) 18, 622, 658, 1690
BstV2I GAAGAC 3 cut(s) 1249, 1422, 1559
BstX2I RGATCY 3 cut(s) 20, 521, 1639
BstYI RGATCY 3 cut(s) 20, 521, 1639
BsuI GTATCC 2 cut(s) 643, 1672
BsuRI GGCC 3 cut(s) 170, 560, 871
BtgI CCRYGG 2 cut(s) 108, 475
BtrI CACGTC 1 cut(s) 151
BtsCI GGATG 9 cut(s) 264, 486, 805, 862, 885, 1045, 1531, 1791, 1855
BtsIMutI CAGTG 4 cut(s) 294, 577, 934, 1872
Cac8I GCNNGC 5 cut(s) 13, 245, 1196, 1839, 1904
CaiI CAGNNNCTG 1 cut(s) 727
CfoI GCGC 7 cut(s) 11, 233, 243, 293, 356, 385, 426
Cfr10I RCCGGY 2 cut(s) 11, 243
Cfr13I GGNCC 2 cut(s) 869, 1233
CpoI CGGWCCG 1 cut(s) 1233
CseI GACGC 3 cut(s) 121, 353, 418
Csp6I GTAC 3 cut(s) 220, 335, 1335
CspI CGGWCCG 1 cut(s) 1233
CviAII CATG 4 cut(s) 109, 888, 1571, 1618
CviQI GTAC 3 cut(s) 220, 335, 1335
DdeI CTNAG 3 cut(s) 158, 401, 1496
DpnI GATC 9 cut(s) 22, 182, 365, 523, 569, 1255, 1377, 1641, 1696
DpnII GATC 9 cut(s) 20, 180, 363, 521, 567, 1253, 1375, 1639, 1694
DraIII CACNNNGTG 1 cut(s) 929
DriI GACNNNNNGTC 1 cut(s) 124
EaeI YGGCCR 1 cut(s) 168
Eam1105I GACNNNNNGTC 1 cut(s) 124
EciI GGCGGA 2 cut(s) 178, 271
Eco130I CCWWGG 3 cut(s) 108, 274, 1179
Eco24I GRGCYC 1 cut(s) 327
Eco31I GGTCTC 1 cut(s) 543
Eco47I GGWCC 1 cut(s) 1233
Eco57I CTGAAG 1 cut(s) 885
Eco72I CACGTG 1 cut(s) 340
Eco88I CYCGRG 1 cut(s) 320
EcoRII CCWGG 2 cut(s) 757, 1507
EcoT14I CCWWGG 3 cut(s) 108, 274, 1179
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 3 cut(s) 108, 274, 1179
FaeI CATG 4 cut(s) 112, 891, 1574, 1621
FaqI GGGAC 3 cut(s) 22, 137, 196
FatI CATG 4 cut(s) 108, 887, 1570, 1617
FauI CCCGC 3 cut(s) 34, 359, 1338
FokI GGATG 9 cut(s) 251, 493, 812, 869, 892, 1052, 1538, 1798, 1862
FriOI GRGCYC 1 cut(s) 327
FspBI CTAG 7 cut(s) 392, 549, 1191, 1322, 1485, 1610, 1868
GlaI GCGC 7 cut(s) 10, 232, 242, 292, 355, 384, 425
GsaI CCCAGC 2 cut(s) 241, 846
GsuI CTGGAG 4 cut(s) 191, 780, 977, 1109
HaeII RGCGCY 3 cut(s) 12, 244, 386
HaeIII GGCC 3 cut(s) 170, 560, 871
HapII CCGG 6 cut(s) 12, 129, 244, 328, 493, 1563
HgaI GACGC 3 cut(s) 121, 353, 418
HhaI GCGC 7 cut(s) 11, 233, 243, 293, 356, 385, 426
Hin1I GRCGYC 3 cut(s) 59, 132, 345
Hin1II CATG 4 cut(s) 112, 891, 1574, 1621
Hin6I GCGC 7 cut(s) 9, 231, 241, 291, 354, 383, 424
HinP1I GCGC 7 cut(s) 9, 231, 241, 291, 354, 383, 424
HincII GTYRAC 2 cut(s) 791, 1822
HindII GTYRAC 2 cut(s) 791, 1822
HindIII AAGCTT 1 cut(s) 553
HinfI GANTC 7 cut(s) 185, 299, 724, 1184, 1418, 1445, 1457
HpaI GTTAAC 1 cut(s) 1822
HpaII CCGG 6 cut(s) 12, 129, 244, 328, 493, 1563
HphI GGTGA 3 cut(s) 607, 1073, 1523
Hpy166II GTNNAC 8 cut(s) 337, 343, 598, 743, 775, 791, 1514, 1822
Hpy188III TCNNGA 6 cut(s) 565, 1145, 1422, 1485, 1802, 1861
Hpy8I GTNNAC 8 cut(s) 337, 343, 598, 743, 775, 791, 1514, 1822
Hpy99I CGWCG 8 cut(s) 61, 64, 67, 80, 101, 137, 146, 176
HpyAV CCTTC 6 cut(s) 571, 639, 860, 1326, 1473, 1787
HpyCH4III ACNGT 7 cut(s) 376, 795, 929, 1518, 1763, 1826, 1876
HpyCH4IV ACGT 4 cut(s) 59, 150, 339, 750
HpyF3I CTNAG 3 cut(s) 158, 401, 1496
HpySE526I ACGT 4 cut(s) 59, 150, 339, 750
Hsp92I GRCGYC 3 cut(s) 59, 132, 345
Hsp92II CATG 4 cut(s) 112, 891, 1574, 1621
HspAI GCGC 7 cut(s) 9, 231, 241, 291, 354, 383, 424
KroI GCCGGC 2 cut(s) 11, 243
KroNI GCCGGC 2 cut(s) 13, 245
KspAI GTTAAC 1 cut(s) 1822
Kzo9I GATC 9 cut(s) 20, 180, 363, 521, 567, 1253, 1375, 1639, 1694
LmnI GCTCC 9 cut(s) 72, 112, 207, 284, 330, 761, 783, 1090, 1157
Lsp1109I GCAGC 4 cut(s) 18, 622, 658, 1690
LweI GCATC 5 cut(s) 24, 102, 891, 1126, 1866
MaeI CTAG 7 cut(s) 392, 549, 1191, 1322, 1485, 1610, 1868
MaeII ACGT 4 cut(s) 59, 150, 339, 750
MaeIII GTNAC 5 cut(s) 79, 677, 1627, 1757, 1894
MalI GATC 9 cut(s) 22, 182, 365, 523, 569, 1255, 1377, 1641, 1696
MbiI CCGCTC 1 cut(s) 305
MboI GATC 9 cut(s) 20, 180, 363, 521, 567, 1253, 1375, 1639, 1694
MboII GAAGA 9 cut(s) 956, 988, 1254, 1312, 1364, 1427, 1559, 1746, 1895
MflI RGATCY 3 cut(s) 20, 521, 1639
MhlI GDGCHC 4 cut(s) 150, 204, 327, 703
MluCI AATT 4 cut(s) 717, 1127, 1219, 1742
MlyI GAGTC 5 cut(s) 194, 293, 1193, 1412, 1466
MmeI TCCRAC 4 cut(s) 777, 1491, 1763, 1770
MroNI GCCGGC 2 cut(s) 11, 243
MroXI GAANNNNTTC 1 cut(s) 717
MseI TTAA 5 cut(s) 1130, 1385, 1520, 1590, 1821
MspA1I CMGCKG 3 cut(s) 197, 1345, 1837
MspI CCGG 6 cut(s) 12, 129, 244, 328, 493, 1563
MspR9I CCNGG 4 cut(s) 494, 759, 1509, 1563
Mva1269I GAATGC 1 cut(s) 736
MvaI CCWGG 2 cut(s) 759, 1509
MvnI CGCG 5 cut(s) 218, 231, 291, 354, 424
NaeI GCCGGC 2 cut(s) 13, 245
NciI CCSGG 2 cut(s) 494, 1563
NcoI CCATGG 1 cut(s) 108
NdeII GATC 9 cut(s) 20, 180, 363, 521, 567, 1253, 1375, 1639, 1694
NgoMIV GCCGGC 2 cut(s) 11, 243
NlaIII CATG 4 cut(s) 112, 891, 1574, 1621
NlaIV GGNNCC 5 cut(s) 22, 280, 326, 491, 1607
NmeAIII GCCGAG 1 cut(s) 382
NmuCI GTSAC 3 cut(s) 79, 677, 1757
PcsI WCGNNNNNNNCGW 2 cut(s) 141, 180
PctI GAATGC 1 cut(s) 736
PdiI GCCGGC 2 cut(s) 13, 245
PdmI GAANNNNTTC 1 cut(s) 717
PfeI GAWTC 2 cut(s) 724, 1445
PflFI GACNNNGTC 1 cut(s) 61
PleI GAGTC 5 cut(s) 193, 293, 1192, 1412, 1465
PmaCI CACGTG 1 cut(s) 340
PmlI CACGTG 1 cut(s) 340
PpsI GAGTC 5 cut(s) 193, 293, 1192, 1412, 1465
Ppu21I YACGTR 2 cut(s) 340, 751
Psp6I CCWGG 2 cut(s) 757, 1507
PspCI CACGTG 1 cut(s) 340
PspFI CCCAGC 2 cut(s) 237, 842
PspGI CCWGG 2 cut(s) 757, 1507
PspN4I GGNNCC 5 cut(s) 22, 280, 326, 491, 1607
PspPI GGNCC 2 cut(s) 869, 1233
PstI CTGCAG 1 cut(s) 1648
PstNI CAGNNNCTG 1 cut(s) 727
PsuI RGATCY 3 cut(s) 20, 521, 1639
PsyI GACNNNGTC 1 cut(s) 61
RsaI GTAC 3 cut(s) 221, 336, 1336
RsaNI GTAC 3 cut(s) 220, 335, 1335
Rsr2I CGGWCCG 1 cut(s) 1233
RsrII CGGWCCG 1 cut(s) 1233
SaqAI TTAA 5 cut(s) 1130, 1385, 1520, 1590, 1821
Sau3AI GATC 9 cut(s) 20, 180, 363, 521, 567, 1253, 1375, 1639, 1694
Sau96I GGNCC 2 cut(s) 869, 1233
SchI GAGTC 5 cut(s) 194, 293, 1193, 1412, 1466
ScrFI CCNGG 4 cut(s) 494, 759, 1509, 1563
SduI GDGCHC 4 cut(s) 150, 204, 327, 703
SfaNI GCATC 5 cut(s) 24, 102, 891, 1126, 1866
SfcI CTRYAG 4 cut(s) 1440, 1644, 1825, 1875
SinI GGWCC 1 cut(s) 1233
SmlI CTYRAG 1 cut(s) 1420
SmoI CTYRAG 1 cut(s) 1420
Sse9I AATT 4 cut(s) 717, 1127, 1219, 1742
SspMI CTAG 7 cut(s) 392, 549, 1191, 1322, 1485, 1610, 1868
StyD4I CCNGG 4 cut(s) 492, 757, 1507, 1561
StyI CCWWGG 3 cut(s) 108, 274, 1179
TaaI ACNGT 7 cut(s) 376, 795, 929, 1518, 1763, 1826, 1876
TaiI ACGT 4 cut(s) 62, 153, 342, 753
TaqI TCGA 4 cut(s) 96, 144, 183, 1860
TaqII GACCGA 1 cut(s) 1221
TasI AATT 4 cut(s) 717, 1127, 1219, 1742
TauI GCSGC 8 cut(s) 140, 165, 236, 314, 469, 530, 533, 874
TfiI GAWTC 2 cut(s) 724, 1445
Tru1I TTAA 5 cut(s) 1130, 1385, 1520, 1590, 1821
Tru9I TTAA 5 cut(s) 1130, 1385, 1520, 1590, 1821
TscAI CASTG 4 cut(s) 301, 577, 934, 1879
TseFI GTSAC 3 cut(s) 79, 677, 1757
TseI GCWGC 4 cut(s) 6, 635, 671, 1703
Tsp45I GTSAC 3 cut(s) 79, 677, 1757
TspDTI ATGAA 6 cut(s) 683, 726, 1080, 1086, 1326, 1559
TspGWI ACGGA 1 cut(s) 615
TspRI CASTG 4 cut(s) 301, 577, 934, 1879
Tth111I GACNNNGTC 1 cut(s) 61
VpaK11BI GGWCC 1 cut(s) 1233
XapI RAATTY 2 cut(s) 1219, 1742
XbaI TCTAGA 1 cut(s) 1484
XmnI GAANNNNTTC 1 cut(s) 717
XspI CTAG 7 cut(s) 392, 549, 1191, 1322, 1485, 1610, 1868
ZraI GACGTC 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.