MD01G1070100.v1.1

C-terminal binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0001355
Physical Location & Seq
Reverse (-)
17423242 .. 17427964
4723 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1070100.v1.1.491

Sequence Viewer

Length: 1938 bp
ATGAGCGCAAGCACCGGTCACAGATCCCCTGCAACAATGCCCCGCCGTAACAGCCCTGCGGCTTCACCCTCATCGCTCCCCTTGGTCGTCACTCTCAATTGCATCGATGACTTCGGCATGGAGCAGGACTCCTTGTCCGGCGTCGCCGCTGTCGAGCACGTGCCGCTTAGTCGCCTCGCCGAAGGCAAGATCGAGTCGGCCTCCGCCGTGCTCCTCCAGTCCCTCGCGTACCTCCCACGGGCCGCCCAGCGCCGCCTCCGCCCCTACCAGCTCATCCTCTGCCTGGGCTCCTCCGACCGCGCAGTCGATTCGGCCTTGGCCGCCGACCTCGGGATCCGGCTTGTCCACGTGGACGTATCCCGTGCCGAGGAAATTGCCGATACGGTTATGGCGCTCTTCCTCGGGTTGCTCCGCCGGACGCATATGCTCTCCCGCCACACGCTCTCCGCTTCGGGATGGCTCGGCTCGATCCAGCCGCTGTGCCGTGGGATGAGACGGTGTCGAGGCTTGGTTTTGGGGATTATCGGCAGATCTGCGTCGGCTAGGTCTCTGGCTACAAGGAGCTTGGCCTTCAAAATGAACGTTCTCTATTTCGATGTTCAAGACGTAGAGGTGAACGGAAAAGTGAGCATTTCTCCTGTAAGCTTTCCTTCTGCTGCGAGAAGAATGGATACACTTAATGATTTACTGGCTGCAAGTGACCTCATTTCATTGCACTGTGCTCTGACAAATGAAACAGTTCAGATTCTAAATGCTGAATGCTTACAGCATGTAAAGCCTGGAGCATTTCTGGTCAACACAGGGAGCTGTCAACTATTGGACGATTGTTCTGTGAAACAGCTTTTGATTGACGGAACCTTAGCTGGGTGTGCTTTAGATGGCGCTGAAGGGCCACAATGGATGGAAGCATGGGTGAAGGAGATGCCCAACGTGTTGATACTTCCACACAGTGCAGATTATAGTGAAGAAGTATGGTTGGAGATAAGGGAGAAAGCTATCTCCATATTGCAGACATTCTTTTTTGACGGGATTGTTCCAAAAGATTCTGTCTCTGAAGAGGAGAATGAAAGTGAGTTAGGTGATGAAAATGAAGAGTCGGATAAGCTGGACAGAGAAAATAACTTGCAGCTATCCGTTATTGAGCAACCAACTGAAGTCATTCATGCAAGCCCGGAACGCTCTCAGAATAAAGAAGCTATTCAATCCAAGGAGTCTCCTAGCCAGCACCAAAGTTCAGGTTTATCTCAAAGTGCCACTCGACCTGATGGAAGACGAGTCAGATCAGGTAAGAAAGCCAAAAAGAGGCACGCACACCAAAAATCCCGGCAAAAGTCAGATGATCCTTCACGAGAAAAAGAAAGTACCTCGCAGCGGGAAGAAGATACAGCTATGAGTGGAACTGATCAAGCGTTAAGTTCCAGTTCTCGGTTTGCCTCCCCAGAGGACTCAAGAAGTAGGAAAACTCAAATAGAATCAATGCAAGAATTGCCTTCCCACCATCTTCAAAAATCTATTAAGAGGCTCAGTGGAAAGCCTGGTGAGCTGTTGAAGGATGGGTATGTTGTCGCTTTGTATGCAAGAGATCGTCCCGCCCTCCATGTCTCAAGGCAAAGAGTTAAAGGTGGCGGTTGGCTCCTAGATACCATGTCAAATGTAACAAAAAGAGATCCTGCAGCTCAGTTTCTCATTGTTATCAGAAGCAAGGACACAATTGGTTTGCGATCCTTTGCTGCTGGTGGAAAGTTATTGCAGATAAATAGAAAAATGGAATTTGTATTTGCCAGTCACAGTTTCGATGTCTGGGAGAGTTGGATGTTGGAAGGTACTCTGGAGGAATGTAGGCTGGTTAACTGTAGAAATCCTTTGGCTGTTTTGGATGTAAGCATCGAGATTCTGGCCACCATAGGGGAAGACGGGGTTACACGTTGGCTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008360 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010482 GO:0010494 GO:0010769 GO:0012505 GO:0016043 GO:0016049 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030856 GO:0031128 GO:0031129 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0040007 GO:0042802 GO:0042803 GO:0042814 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0046983 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048468 GO:0048530 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051302 GO:0060284 GO:0060560 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071826 GO:0071840 GO:0090558 GO:0090567 GO:0090626 GO:0090696 GO:0090697 GO:0090698 GO:0098791 GO:0099402 GO:1905392 GO:1990904 GO:2000024 GO:2000026 GO:2000039
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2-Hacid_dh_C

Protein Analysis

646

Amino Acids

70.96

Weight (kDa)

6.28

Isoelectric Point (pI)

67.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2-Hacid_dh_C PF02826 130 - 318 2.2e-27 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 302
AccII CGCG 2 cut(s) 227, 300
AclI AACGTT 1 cut(s) 582
AclWI GGATC 7 cut(s) 18, 328, 341, 463, 1334, 1661, 1716
AcoI YGGCCR 2 cut(s) 318, 1896
AcsI RAATTY 1 cut(s) 1769
AcuI CTGAAG 3 cut(s) 906, 1074, 1173
AcvI CACGTG 2 cut(s) 160, 349
AcyI GRCGYC 1 cut(s) 141
AdeI CACNNNGTG 1 cut(s) 950
AfaI GTAC 3 cut(s) 230, 1363, 1825
AfiI CCNNNNNNNGG 9 cut(s) 238, 283, 330, 367, 864, 1302, 1371, 1425, 1905
AflIII ACRYGT 2 cut(s) 930, 1922
AgeI ACCGGT 1 cut(s) 14
AgsI TTSAA 5 cut(s) 574, 602, 1202, 1505, 1549
AhdI GACNNNNNGTC 1 cut(s) 133
AjnI CCWGG 3 cut(s) 282, 778, 1534
Alw21I GWGCWC 3 cut(s) 159, 213, 724
Alw26I GTCTC 5 cut(s) 487, 552, 1054, 1218, 1606
AlwI GGATC 7 cut(s) 18, 328, 341, 463, 1334, 1661, 1716
AlwNI CAGNNNCTG 1 cut(s) 478
Ama87I CYCGRG 2 cut(s) 329, 401
AoxI GGCC 7 cut(s) 198, 240, 312, 318, 567, 890, 1896
ApeKI GCWGC 6 cut(s) 656, 692, 1126, 1369, 1673, 1730
ApoI RAATTY 1 cut(s) 1769
AsiGI ACCGGT 1 cut(s) 14
Asp700I GAANNNNTTC 3 cut(s) 738, 1158, 1197
AspLEI GCGC 5 cut(s) 8, 252, 302, 394, 884
AspS9I GGNCC 2 cut(s) 240, 890
AsuC2I CCSGG 2 cut(s) 1172, 1324
AsuHPI GGTGA 5 cut(s) 57, 625, 925, 1091, 1550
AvaI CYCGRG 2 cut(s) 329, 401
BalI TGGCCA 1 cut(s) 1898
BamHI GGATCC 1 cut(s) 333
BanII GRGCYC 1 cut(s) 290
BarI GAAGNNNNNNTAC 2 cut(s) 655, 687
BauI CACGAG 1 cut(s) 1347
BbrPI CACGTG 2 cut(s) 160, 349
BbsI GAAGAC 2 cut(s) 1276, 1917
Bbv12I GWGCWC 3 cut(s) 159, 213, 724
BbvI GCAGC 6 cut(s) 643, 679, 1138, 1381, 1685, 1717
BccI CCATC 6 cut(s) 450, 872, 895, 1259, 1506, 1547
BceAI ACGGC 3 cut(s) 30, 191, 468
BcgI CGANNNNNNTGC 4 cut(s) 291, 325, 356, 390
BciT130I CCWGG 3 cut(s) 284, 780, 1536
BciVI GTATCC 2 cut(s) 367, 664
BclI TGATCA 1 cut(s) 1402
BcnI CCSGG 2 cut(s) 1172, 1324
BcoDI GTCTC 5 cut(s) 487, 552, 1054, 1218, 1606
BfaI CTAG 3 cut(s) 543, 1218, 1637
BfmI CTRYAG 2 cut(s) 1671, 1852
BfoI RGCGCY 3 cut(s) 253, 395, 885
BfuI GTATCC 2 cut(s) 367, 664
BglII AGATCT 1 cut(s) 530
Bme1390I CCNGG 5 cut(s) 284, 780, 1172, 1324, 1536
BmeRI GACNNNNNGTC 1 cut(s) 133
BmeT110I CYCGRG 2 cut(s) 329, 401
BmgT120I GGNCC 2 cut(s) 240, 890
BmiI GGNNCC 4 cut(s) 289, 335, 856, 1634
BmrFI CCNGG 5 cut(s) 284, 780, 1172, 1324, 1536
BmsI GCATC 3 cut(s) 111, 912, 1893
BpiI GAAGAC 2 cut(s) 1276, 1917
BplI GAGNNNNNCTC 6 cut(s) 113, 145, 185, 217, 619, 651
BpmI CTGGAG 3 cut(s) 200, 801, 1850
Bpu10I CCTNAGC 1 cut(s) 859
BpuEI CTTGAG 2 cut(s) 1432, 1588
BpuMI CCSGG 2 cut(s) 1172, 1324
Bsa29I ATCGAT 1 cut(s) 105
BsaAI YACGTR 2 cut(s) 160, 349
BsaHI GRCGYC 1 cut(s) 141
BsaI GGTCTC 1 cut(s) 552
BsaJI CCNNGG 9 cut(s) 81, 236, 283, 315, 328, 366, 400, 484, 1206
BsaWI WCCGGW 1 cut(s) 14
BsaXI ACNNNNNCTCC 2 cut(s) 428, 458
Bsc4I CCNNNNNNNGG 9 cut(s) 238, 283, 330, 367, 864, 1302, 1371, 1425, 1905
Bse118I RCCGGY 1 cut(s) 14
Bse1I ACTGG 4 cut(s) 217, 693, 1419, 1782
Bse3DI GCAATG 1 cut(s) 710
BseBI CCWGG 3 cut(s) 284, 780, 1536
BseCI ATCGAT 1 cut(s) 105
BseDI CCNNGG 9 cut(s) 81, 236, 283, 315, 328, 366, 400, 484, 1206
BseGI GGATG 7 cut(s) 273, 461, 495, 906, 1558, 1818, 1882
BseLI CCNNNNNNNGG 9 cut(s) 238, 283, 330, 367, 864, 1302, 1371, 1425, 1905
BseMI GCAATG 1 cut(s) 710
BseMII CTCAG 3 cut(s) 1196, 1537, 1691
BseNI ACTGG 4 cut(s) 217, 693, 1419, 1782
BseRI GAGGAG 3 cut(s) 203, 280, 1073
BseXI GCAGC 6 cut(s) 643, 679, 1138, 1381, 1685, 1717
BseYI CCCAGC 2 cut(s) 246, 863
BsgI GTGCAG 1 cut(s) 972
Bsh1236I CGCG 2 cut(s) 227, 300
Bsh1285I CGRYCG 1 cut(s) 298
BshFI GGCC 7 cut(s) 200, 242, 314, 320, 569, 892, 1898
BshTI ACCGGT 1 cut(s) 14
BshVI ATCGAT 1 cut(s) 105
BsiEI CGRYCG 1 cut(s) 298
BsiHKAI GWGCWC 3 cut(s) 159, 213, 724
BsiHKCI CYCGRG 2 cut(s) 329, 401
BsiSI CCGG 6 cut(s) 15, 138, 337, 415, 1172, 1324
BslFI GGGAC 2 cut(s) 205, 1572
BslI CCNNNNNNNGG 9 cut(s) 238, 283, 330, 367, 864, 1302, 1371, 1425, 1905
BsmAI GTCTC 5 cut(s) 487, 552, 1054, 1218, 1606
BsmBI CGTCTC 1 cut(s) 487
BsmFI GGGAC 2 cut(s) 205, 1572
BsmI GAATGC 1 cut(s) 764
BsnI GGCC 7 cut(s) 200, 242, 314, 320, 569, 892, 1898
Bso31I GGTCTC 1 cut(s) 552
BsoBI CYCGRG 2 cut(s) 329, 401
Bsp1286I GDGCHC 4 cut(s) 159, 213, 290, 724
BspANI GGCC 7 cut(s) 200, 242, 314, 320, 569, 892, 1898
BspCNI CTCAG 3 cut(s) 1195, 1536, 1690
BspDI ATCGAT 1 cut(s) 105
BspFNI CGCG 2 cut(s) 227, 300
BspLI GGNNCC 4 cut(s) 289, 335, 856, 1634
BspMAI CTGCAG 1 cut(s) 1675
BspPI GGATC 7 cut(s) 18, 328, 341, 463, 1334, 1661, 1716
BspQI GCTCTTC 1 cut(s) 401
BspTNI GGTCTC 1 cut(s) 552
BsrDI GCAATG 1 cut(s) 710
BsrFI RCCGGY 1 cut(s) 14
BsrI ACTGG 4 cut(s) 217, 693, 1419, 1782
BssAI RCCGGY 1 cut(s) 14
BssECI CCNNGG 9 cut(s) 81, 236, 283, 315, 328, 366, 400, 484, 1206
BssNI GRCGYC 1 cut(s) 141
BssSI CACGAG 1 cut(s) 1347
BssT1I CCWWGG 3 cut(s) 81, 315, 1206
Bst2BI CACGAG 1 cut(s) 1347
Bst2UI CCWGG 3 cut(s) 284, 780, 1536
Bst4CI ACNGT 7 cut(s) 385, 498, 719, 739, 950, 1790, 1853
Bst6I CTCTTC 3 cut(s) 401, 1050, 1086
BstACI GRCGYC 1 cut(s) 141
BstAPI GCANNNNNTGC 1 cut(s) 1486
BstBAI YACGTR 2 cut(s) 160, 349
BstC8I GCNNGC 4 cut(s) 10, 1168, 1223, 1308
BstDEI CTNAG 5 cut(s) 167, 859, 1182, 1523, 1677
BstDSI CCRYGG 2 cut(s) 236, 484
BstF5I GGATG 7 cut(s) 273, 461, 495, 906, 1558, 1818, 1882
BstFNI CGCG 2 cut(s) 227, 300
BstH2I RGCGCY 3 cut(s) 253, 395, 885
BstHHI GCGC 5 cut(s) 8, 252, 302, 394, 884
BstMAI GTCTC 5 cut(s) 487, 552, 1054, 1218, 1606
BstMCI CGRYCG 1 cut(s) 298
BstNI CCWGG 3 cut(s) 284, 780, 1536
BstNSI RCATGY 1 cut(s) 773
BstSCI CCNGG 5 cut(s) 282, 778, 1170, 1322, 1534
BstSFI CTRYAG 2 cut(s) 1671, 1852
BstUI CGCG 2 cut(s) 227, 300
BstV1I GCAGC 6 cut(s) 643, 679, 1138, 1381, 1685, 1717
BstV2I GAAGAC 2 cut(s) 1276, 1917
BstX2I RGATCY 4 cut(s) 23, 333, 530, 1666
BstYI RGATCY 4 cut(s) 23, 333, 530, 1666
Bsu15I ATCGAT 1 cut(s) 105
BsuI GTATCC 2 cut(s) 367, 664
BsuRI GGCC 7 cut(s) 200, 242, 314, 320, 569, 892, 1898
BsuTUI ATCGAT 1 cut(s) 105
BtgI CCRYGG 2 cut(s) 236, 484
BtgZI GCGATG 1 cut(s) 57
BtsCI GGATG 7 cut(s) 273, 461, 495, 906, 1558, 1818, 1882
BtsIMutI CAGTG 3 cut(s) 715, 955, 1531
Cac8I GCNNGC 4 cut(s) 10, 1168, 1223, 1308
CaiI CAGNNNCTG 1 cut(s) 478
CfoI GCGC 5 cut(s) 8, 252, 302, 394, 884
Cfr10I RCCGGY 1 cut(s) 14
Cfr13I GGNCC 2 cut(s) 240, 890
ClaI ATCGAT 1 cut(s) 105
CseI GACGC 3 cut(s) 130, 427, 525
Csp6I GTAC 3 cut(s) 229, 1362, 1824
CspAI ACCGGT 1 cut(s) 14
CviAII CATG 6 cut(s) 118, 770, 909, 1163, 1598, 1645
CviQI GTAC 3 cut(s) 229, 1362, 1824
DdeI CTNAG 5 cut(s) 167, 859, 1182, 1523, 1677
DraIII CACNNNGTG 1 cut(s) 950
DrdI GACNNNNNNGTC 1 cut(s) 302
DriI GACNNNNNGTC 1 cut(s) 133
DseDI GACNNNNNNGTC 1 cut(s) 302
EaeI YGGCCR 2 cut(s) 318, 1896
Eam1104I CTCTTC 3 cut(s) 401, 1050, 1086
Eam1105I GACNNNNNGTC 1 cut(s) 133
EarI CTCTTC 3 cut(s) 401, 1050, 1086
EciI GGCGGA 3 cut(s) 193, 248, 401
Eco130I CCWWGG 3 cut(s) 81, 315, 1206
Eco24I GRGCYC 1 cut(s) 290
Eco31I GGTCTC 1 cut(s) 552
Eco57I CTGAAG 3 cut(s) 906, 1074, 1173
Eco72I CACGTG 2 cut(s) 160, 349
Eco88I CYCGRG 2 cut(s) 329, 401
EcoRII CCWGG 3 cut(s) 282, 778, 1534
EcoT14I CCWWGG 3 cut(s) 81, 315, 1206
EcoT38I GRGCYC 1 cut(s) 290
ErhI CCWWGG 3 cut(s) 81, 315, 1206
Esp3I CGTCTC 1 cut(s) 487
FaeI CATG 6 cut(s) 121, 773, 912, 1166, 1601, 1648
FalI AAGNNNNNCTT 2 cut(s) 634, 666
FaqI GGGAC 2 cut(s) 205, 1572
FatI CATG 6 cut(s) 117, 769, 908, 1162, 1597, 1644
FauI CCCGC 4 cut(s) 50, 440, 1365, 1597
FauNDI CATATG 1 cut(s) 423
FbaI TGATCA 1 cut(s) 1402
FokI GGATG 7 cut(s) 260, 468, 502, 913, 1565, 1825, 1889
FriOI GRGCYC 1 cut(s) 290
FspBI CTAG 3 cut(s) 543, 1218, 1637
GlaI GCGC 5 cut(s) 7, 251, 301, 393, 883
GsaI CCCAGC 2 cut(s) 250, 867
GsuI CTGGAG 3 cut(s) 200, 801, 1850
HaeII RGCGCY 3 cut(s) 253, 395, 885
HaeIII GGCC 7 cut(s) 200, 242, 314, 320, 569, 892, 1898
HapII CCGG 6 cut(s) 15, 138, 337, 415, 1172, 1324
HgaI GACGC 3 cut(s) 130, 427, 525
HhaI GCGC 5 cut(s) 8, 252, 302, 394, 884
Hin1I GRCGYC 1 cut(s) 141
Hin1II CATG 6 cut(s) 121, 773, 912, 1166, 1601, 1648
Hin6I GCGC 5 cut(s) 6, 250, 300, 392, 882
HinP1I GCGC 5 cut(s) 6, 250, 300, 392, 882
HincII GTYRAC 3 cut(s) 796, 812, 1849
HindII GTYRAC 3 cut(s) 796, 812, 1849
HindIII AAGCTT 1 cut(s) 643
HpaI GTTAAC 1 cut(s) 1849
HpaII CCGG 6 cut(s) 15, 138, 337, 415, 1172, 1324
HphI GGTGA 5 cut(s) 57, 625, 925, 1091, 1550
Hpy166II GTNNAC 6 cut(s) 346, 352, 616, 796, 812, 1849
Hpy188I TCNGA 9 cut(s) 295, 726, 744, 1054, 1099, 1185, 1280, 1336, 1697
Hpy188III TCNNGA 7 cut(s) 331, 453, 602, 1347, 1449, 1829, 1888
Hpy8I GTNNAC 6 cut(s) 346, 352, 616, 796, 812, 1849
Hpy99I CGWCG 2 cut(s) 146, 541
HpyAV CCTTC 9 cut(s) 176, 580, 660, 881, 910, 1353, 1500, 1543, 1814
HpyCH4III ACNGT 7 cut(s) 385, 498, 719, 739, 950, 1790, 1853
HpyCH4IV ACGT 7 cut(s) 159, 348, 354, 582, 606, 930, 1924
HpyF3I CTNAG 5 cut(s) 167, 859, 1182, 1523, 1677
HpySE526I ACGT 7 cut(s) 159, 348, 354, 582, 606, 930, 1924
Hsp92I GRCGYC 1 cut(s) 141
Hsp92II CATG 6 cut(s) 121, 773, 912, 1166, 1601, 1648
HspAI GCGC 5 cut(s) 6, 250, 300, 392, 882
Ksp22I TGATCA 1 cut(s) 1402
KspAI GTTAAC 1 cut(s) 1849
LguI GCTCTTC 1 cut(s) 401
LmnI GCTCC 9 cut(s) 81, 121, 216, 293, 414, 561, 782, 804, 1638
Lsp1109I GCAGC 6 cut(s) 643, 679, 1138, 1381, 1685, 1717
LweI GCATC 3 cut(s) 111, 912, 1893
MaeI CTAG 3 cut(s) 543, 1218, 1637
MaeII ACGT 7 cut(s) 159, 348, 354, 582, 606, 930, 1924
MaeIII GTNAC 7 cut(s) 17, 47, 88, 698, 1654, 1784, 1918
MfeI CAATTG 2 cut(s) 97, 1710
MflI RGATCY 4 cut(s) 23, 333, 530, 1666
MhlI GDGCHC 4 cut(s) 159, 213, 290, 724
MlsI TGGCCA 1 cut(s) 1898
MluCI AATT 5 cut(s) 97, 372, 1484, 1710, 1769
MluNI TGGCCA 1 cut(s) 1898
MlyI GAGTC 6 cut(s) 122, 203, 1103, 1220, 1284, 1439
MmeI TCCRAC 5 cut(s) 318, 957, 1077, 1790, 1797
Mox20I TGGCCA 1 cut(s) 1898
MroXI GAANNNNTTC 3 cut(s) 738, 1158, 1197
MscI TGGCCA 1 cut(s) 1898
MseI TTAA 5 cut(s) 678, 1412, 1515, 1617, 1848
Msp20I TGGCCA 1 cut(s) 1898
MspA1I CMGCKG 3 cut(s) 149, 478, 1372
MspI CCGG 6 cut(s) 15, 138, 337, 415, 1172, 1324
MspR9I CCNGG 5 cut(s) 284, 780, 1172, 1324, 1536
MunI CAATTG 2 cut(s) 97, 1710
Mva1269I GAATGC 1 cut(s) 764
MvaI CCWGG 3 cut(s) 284, 780, 1536
MvnI CGCG 2 cut(s) 227, 300
NciI CCSGG 2 cut(s) 1172, 1324
NdeI CATATG 1 cut(s) 423
NlaIII CATG 6 cut(s) 121, 773, 912, 1166, 1601, 1648
NlaIV GGNNCC 4 cut(s) 289, 335, 856, 1634
NmeAIII GCCGAG 2 cut(s) 391, 441
NmuCI GTSAC 4 cut(s) 17, 88, 698, 1784
NspI RCATGY 1 cut(s) 773
PciSI GCTCTTC 1 cut(s) 401
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PctI GAATGC 1 cut(s) 764
PdmI GAANNNNTTC 3 cut(s) 738, 1158, 1197
PfeI GAWTC 5 cut(s) 308, 745, 1043, 1472, 1891
PflFI GACNNNGTC 1 cut(s) 498
PinAI ACCGGT 1 cut(s) 14
PleI GAGTC 6 cut(s) 122, 202, 1102, 1219, 1283, 1439
PmaCI CACGTG 2 cut(s) 160, 349
PmlI CACGTG 2 cut(s) 160, 349
PpsI GAGTC 6 cut(s) 122, 202, 1102, 1219, 1283, 1439
Ppu21I YACGTR 2 cut(s) 160, 349
Psp1406I AACGTT 1 cut(s) 582
Psp6I CCWGG 3 cut(s) 282, 778, 1534
PspCI CACGTG 2 cut(s) 160, 349
PspFI CCCAGC 2 cut(s) 246, 863
PspGI CCWGG 3 cut(s) 282, 778, 1534
PspN4I GGNNCC 4 cut(s) 289, 335, 856, 1634
PspPI GGNCC 2 cut(s) 240, 890
PstI CTGCAG 1 cut(s) 1675
PstNI CAGNNNCTG 1 cut(s) 478
PsuI RGATCY 4 cut(s) 23, 333, 530, 1666
PsyI GACNNNGTC 1 cut(s) 498
RsaI GTAC 3 cut(s) 230, 1363, 1825
RsaNI GTAC 3 cut(s) 229, 1362, 1824
SapI GCTCTTC 1 cut(s) 401
SaqAI TTAA 5 cut(s) 678, 1412, 1515, 1617, 1848
Sau96I GGNCC 2 cut(s) 240, 890
SchI GAGTC 6 cut(s) 122, 203, 1103, 1220, 1284, 1439
ScrFI CCNGG 5 cut(s) 284, 780, 1172, 1324, 1536
SduI GDGCHC 4 cut(s) 159, 213, 290, 724
SfaNI GCATC 3 cut(s) 111, 912, 1893
SfcI CTRYAG 2 cut(s) 1671, 1852
SmlI CTYRAG 2 cut(s) 1447, 1603
SmoI CTYRAG 2 cut(s) 1447, 1603
Sse9I AATT 5 cut(s) 97, 372, 1484, 1710, 1769
SspMI CTAG 3 cut(s) 543, 1218, 1637
StyD4I CCNGG 5 cut(s) 282, 778, 1170, 1322, 1534
StyI CCWWGG 3 cut(s) 81, 315, 1206
TaaI ACNGT 7 cut(s) 385, 498, 719, 739, 950, 1790, 1853
TaiI ACGT 7 cut(s) 162, 351, 357, 585, 609, 933, 1927
TasI AATT 5 cut(s) 97, 372, 1484, 1710, 1769
TauI GCSGC 7 cut(s) 62, 149, 166, 245, 255, 323, 478
TfiI GAWTC 5 cut(s) 308, 745, 1043, 1472, 1891
Tru1I TTAA 5 cut(s) 678, 1412, 1515, 1617, 1848
Tru9I TTAA 5 cut(s) 678, 1412, 1515, 1617, 1848
TscAI CASTG 3 cut(s) 722, 955, 1531
TseFI GTSAC 4 cut(s) 17, 88, 698, 1784
TseI GCWGC 6 cut(s) 656, 692, 1126, 1369, 1673, 1730
Tsp45I GTSAC 4 cut(s) 17, 88, 698, 1784
TspDTI ATGAA 7 cut(s) 593, 699, 747, 1080, 1098, 1104, 1151
TspGWI ACGGA 3 cut(s) 633, 867, 1123
TspRI CASTG 3 cut(s) 722, 955, 1531
Tth111I GACNNNGTC 1 cut(s) 498
XapI RAATTY 1 cut(s) 1769
XceI RCATGY 1 cut(s) 773
XmnI GAANNNNTTC 3 cut(s) 738, 1158, 1197
XspI CTAG 3 cut(s) 543, 1218, 1637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.