Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0001795

Physical Location & Seq

Genomic Coordinates Reverse (-)

14934530 .. 14937942

Gene Structure 3413 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g17670.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGGAGTCCAGCAGAGCCATGGAGTCGGATCCACCGTCGATCAACTTCGGCACGCAAGAGGCCCTCCACCACGTCCGCAGCCTCACCGACGTCGGCGCCATGACGCGCCTCCTCCACGAGTGCATAGCCTACCAACGCGCCTTGGATCTCAACCTCGACAGCCTCCTCTCCCAGCGCTCCGACCTCGACAAGCACCTCTCCAGCCTCCAGAACTCCTCCCAGGTCCTCGAGATCGTCAAGTCCGACGCCGATCACGTCCTCTCCAACGTCTCCTCCACCTGCGACCTCGCCGACCACGTCAGCGCCAAGGTCCGCGAGCTCGACCTCGCACAGTCGCGCGTCAACTCCACGCTCCTCCGCCTCGACGCAATCGTCGAGCGCACCAACTGCATCGACGGCGTCAAGCAGGCTCTCGACGCGCAGGACTACGAGTCCGCCGCCAAATTCGTCCAGAGGTTTATACAGATTGAGTCGGAGTATCGGGATTCGGGATCGGAGCAGAGGGACCAGCTCATGGAGTCGAAGAAGCTTCTGGAATCGATTGTGAAGAAGAAGCTCAACGCCGCCGTGGACCAGAGAGACCATATGAATGTGTTGAGGTTCATTAGGCTGTACACGCCGTTAGGGATAGAGGAGGAGGGTTTGCAGGCTTATGTGAGCTACTTGAGGAAGGTGATTGGGATGAGATCGAGGCTGGAATTCGAGCATTTGATGGAGTTGATGGAGCAGAAGAGCAATCAGAGCCAGCAGGTCAACTTCGTGGGGTGTTTGACCAATTTGTTTAAGGACATTGTGCTGGCGATTGAAGAGAATGACGATATTTTGAGGGGGCTTTGCGGCGAAGATGGGATTGTTTATGCGATTTGCGAGCTTCAGGAGGAGTGTGATTCGAGGGGGAGTATGGTTTTGAAGAAGTATATGGAGTATAGGAGGTTGCCTAAGCTGTCGTCGGAGATCAATGCGCAGAATATGAGTTTGCTTGATGTTGGTGTTGCTGGTGTTGGGAATGAGGGGCCGGATCCGAGAGAGGTGGAGCTTATCTTGGAGGAGATACTGTCTTTGATGCAGTTGGGGGAGGATTATACGGAGTTCATGGTGTCAAAGATCAAGGGATTAAGTAATGTTGATCCGGATTTGGCCCCGAGAGCAACCAAGTCGTTTAGGAGTGGAAGTTTTAGCAAAGTGGTTCAGGACATTACTGGGTTTTATGTCATATTAGAGGGTTTCTTTATGGTTGAGAATGTGAGGAAGGCTATAAGGATTGATGAGCATGTGTCTGACAGTCTTACGACGTCTATGGTGGATGATGTTTTCTATGTCCTGCAGAGTTGCTTGCGAAGGGCGATATCCACTTTGAATATCAGCTCAGTGATTGCTGTGTTGAGTGGTGCAAGTAGTTTGTTGAGTAATGAGTACCATGAGGCTTTGCAACAGAAGATGAGAGAGCCCAATCTTGGTGCAAAGCTGTTCTTGGGTGGTGTTGGTGTTCAAAAGACTGGTACGGAGATTGCCACCGTTTTGAATAATATGGATGTGAGTAGTGAGTATGTGCTTAAACTGAAACACGAGATTGAGGAGCAGTGTTTGGAGGTATTTCCTGCGCCAGCTGATAGAGAAAAAGTCAAGTCTTGTTTGTCTGAGCTAGGGGATATGAGCAACACATTCAAGCAAGCTTTGAATTCTGGCTTGGAGCAACTTGTGGCAACTGTGACACCACGTATCCGTCCAGTGCTTGATAATGTTGCAACCATCAGCTATGAGCTATCAGAGGCCGAGTATGCAGAAAATGAGGTTAATGACCCATGGGTTCAAAGGCTTCTTCATGCTGTTGAGACAAATGCAGCATGGCTGCAGTCACTAATGACCACCAACAACTACGATTCATTCATACATCTGATAATTGAATTCCTTGTTAAGAGGCTTGAAGTAATTATGATGCAGAAGAGATTCAGTCAACTTGGAGGCCTTCAGCTGGACAGAGATTGTAGGGCATTGGTGAGCCACTTTTCTAGCATGACGCAAAGAACTGTTAGAGACAAGTTTGCTCGCCTCACTCAAATGGCAACTATTCTCAACTTAGAAAAGGTCTCTGAGATTCTGGATTTCTGGGGTGAGAATTCAGGCCCTATGACCTGGAGACTGACACCAGCCGAGGTCAGGCGAGTTTTGGGTCTAAGAGTTGATTTTAAATCCGAAGCTATTGCCGCCCTCAAGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000301 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006890 GO:0006891 GO:0006996 GO:0007030 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0016070 GO:0016192 GO:0016787 GO:0016788 GO:0017119 GO:0022607 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048193 GO:0048213 GO:0051179 GO:0051234 GO:0065003 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0099023 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG4 PPR PPR_2 RINT1_TIP1

Protein Analysis

740

Amino Acids

83.22

Weight (kDa)

5.09

Isoelectric Point (pI)

44.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG4_N	PF20663	66 - 159	2.8e-27	Conserved oligomeric Golgi complex subunit 4, N-terminal
COG4_m	PF08318	200 - 480	4.5e-75	COG4 transport protein, middle alpha-helical bundle
COG4_C	PF20662	505 - 721	1.2e-64	Conserved oligomeric Golgi complex subunit 4, C-terminal
RINT1_TIP1	PF04437	557 - 696	6.1e-09	RINT-1/TIP-1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01395
fragaria_vesca	FvH4_4g00571 FvH4_5g29942 FvH4_5g30911 FvH4_7g17670
malus_domestica	MD07G1159700.v1.1 MD07G1159800.v1.1 MD07G1159900.v1.1
prunus_persica	Prupe.2G092100_v2.0.a1 Prupe.2G197800_v2.0.a1 Prupe.2G197800_v2.0.a1
pyrus_communis	pycom01g11300 pycom07g15620
rosa_chinensis	RchiOBHm_Chr1g0334501 RchiOBHm_Chr1g0334511
rosa_laevigata	RLG00000014722 RLG00000018723 RLG00000027257 RLG00000029448
rosa_multiflora	Rmu_co8086664.1_g000001 Rmu_sc0000066.1_g000041 Rmu_sc0003541.1_g000019 Rmu_sc0005302.1_g000007 Rmu_sc0005482.1_g000008 Rmu_sc0007236.1_g000001 Rmu_sc0012136.1_g000029 Rmu_sc0012270.1_g000004 Rmu_sc0033476.1_g000001 Rmu_sc0034305.1_g000001 Rmu_ssc0000404.1_g000010
rosa_roxburghii	Rroxscaffold_2G00120980 Rroxscaffold_4G00294850 Rroxscaffold_4G00316790 Rroxscaffold_5G00373360
rosa_rugosa	Rorug01G0114400 Rorug01G0114500 Rorug02G0242900 Rorug02G0243000
rosa_samantha	Rh1AG139600 Rh1AG176800 Rh1BG105900 Rh1CG131500 Rh1DG143500 Rh6BG398800 Rh7BG198900
rosa_wichuraiana	Rw1G011510 Rw2G023980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	287
AasI	GACNNNNNNGTC	1 cut(s)	371
AatII	GACGTC	2 cut(s)	93, 1295
Acc16I	TGCGCA	1 cut(s)	963
Acc36I	ACCTGC	2 cut(s)	287, 739
AccB1I	GGYRCC	1 cut(s)	95
AccB7I	CCANNNNNTGG	1 cut(s)	514
AccII	CGCG	6 cut(s)	106, 138, 315, 337, 339, 419
AccIII	TCCGGA	1 cut(s)	1129
AciI	CCGC	8 cut(s)	76, 313, 358, 435, 438, 564, 837, 2205
AclWI	GGATC	7 cut(s)	23, 36, 153, 499, 1013, 1026, 1121
AcsI	RAATTY	5 cut(s)	443, 698, 1678, 1904, 2116
AcuI	CTGAAG	2 cut(s)	857, 1952
AcyI	GRCGYC	5 cut(s)	90, 96, 246, 399, 1292
AfaI	GTAC	3 cut(s)	614, 1415, 1501
AfeI	AGCGCT	1 cut(s)	176
AfiI	CCNNNNNNNGG	4 cut(s)	514, 1454, 1972, 2157
AhdI	GACNNNNNGTC	1 cut(s)	430
AjiI	CACGTC	3 cut(s)	73, 256, 298
AjnI	CCWGG	2 cut(s)	219, 2132
AjuI	GAANNNNNNNTTGG	2 cut(s)	1670, 1702
Alw21I	GWGCWC	1 cut(s)	321
Alw26I	GTCTC	6 cut(s)	274, 573, 1826, 2028, 2092, 2131
AlwI	GGATC	7 cut(s)	23, 36, 153, 499, 1013, 1026, 1121
Ama87I	CYCGRG	2 cut(s)	227, 1141
Aor13HI	TCCGGA	1 cut(s)	1129
Aor51HI	AGCGCT	1 cut(s)	176
AoxI	GGCC	6 cut(s)	60, 1013, 1137, 1770, 1963, 2122
ApeKI	GCWGC	3 cut(s)	78, 1841, 1849
ApoI	RAATTY	5 cut(s)	443, 698, 1678, 1904, 2116
Asp700I	GAANNNNTTC	1 cut(s)	1946
AspS9I	GGNCC	8 cut(s)	61, 223, 310, 505, 571, 1013, 1138, 2123
AsuHPI	GGTGA	4 cut(s)	76, 685, 2008, 2123
AvaI	CYCGRG	2 cut(s)	227, 1141
AvaII	GGWCC	4 cut(s)	223, 310, 505, 571
BamHI	GGATCC	2 cut(s)	28, 1018
BanI	GGYRCC	1 cut(s)	95
BanII	GRGCYC	2 cut(s)	321, 1449
BauI	CACGAG	2 cut(s)	116, 1565
Bbv12I	GWGCWC	1 cut(s)	321
BbvI	GCAGC	3 cut(s)	90, 1836, 1853
BccI	CCATC	4 cut(s)	706, 715, 839, 1757
BceAI	ACGGC	3 cut(s)	412, 551, 604
BcgI	CGANNNNNNTGC	4 cut(s)	1137, 1171, 2183, 2217
BciT130I	CCWGG	2 cut(s)	221, 2134
BciVI	GTATCC	1 cut(s)	1730
BcoDI	GTCTC	6 cut(s)	274, 573, 1826, 2028, 2092, 2131
BfaI	CTAG	2 cut(s)	1643, 2010
BfmI	CTRYAG	2 cut(s)	1322, 1850
BfoI	RGCGCY	3 cut(s)	99, 178, 306
BfuAI	ACCTGC	2 cut(s)	287, 739
BfuI	GTATCC	1 cut(s)	1730
BisI	GCNGC	7 cut(s)	79, 438, 564, 838, 1842, 1850, 2205
BlsI	GCNGC	7 cut(s)	80, 439, 565, 839, 1843, 1851, 2206
Bme1390I	CCNGG	2 cut(s)	221, 2134
Bme18I	GGWCC	4 cut(s)	223, 310, 505, 571
BmeRI	GACNNNNNGTC	1 cut(s)	430
BmeT110I	CYCGRG	2 cut(s)	227, 1141
BmgBI	CACGTC	3 cut(s)	73, 256, 298
BmgT120I	GGNCC	8 cut(s)	61, 223, 310, 505, 571, 1013, 1138, 2123
BmiI	GGNNCC	6 cut(s)	30, 97, 506, 1014, 1020, 1140
BmrFI	CCNGG	2 cut(s)	221, 2134
BmrI	ACTGGG	1 cut(s)	1209
BmsI	GCATC	3 cut(s)	399, 1053, 1926
BmuI	ACTGGG	1 cut(s)	1209
BpmI	CTGGAG	3 cut(s)	184, 191, 2155
Bpu10I	CCTNAGC	1 cut(s)	939
BpuEI	CTTGAG	2 cut(s)	685, 2195
Bsa29I	ATCGAT	1 cut(s)	539
BsaAI	YACGTR	1 cut(s)	1718
BsaHI	GRCGYC	5 cut(s)	90, 96, 246, 399, 1292
BsaI	GGTCTC	2 cut(s)	573, 2092
BsaJI	CCNNGG	7 cut(s)	18, 141, 219, 306, 567, 1802, 2151
BsaWI	WCCGGW	1 cut(s)	1129
BsaXI	ACNNNNNCTCC	8 cut(s)	245, 257, 275, 287, 1040, 1070, 1156, 1186
Bsc4I	CCNNNNNNNGG	4 cut(s)	514, 1454, 1972, 2157
Bse1I	ACTGG	3 cut(s)	1204, 1501, 1727
BseAI	TCCGGA	1 cut(s)	1129
BseBI	CCWGG	2 cut(s)	221, 2134
BseCI	ATCGAT	1 cut(s)	539
BseDI	CCNNGG	7 cut(s)	18, 141, 219, 306, 567, 1802, 2151
BseGI	GGATG	3 cut(s)	687, 1309, 1537
BseLI	CCNNNNNNNGG	4 cut(s)	514, 1454, 1972, 2157
BseMII	CTCAG	3 cut(s)	1380, 1629, 2082
BseNI	ACTGG	3 cut(s)	1204, 1501, 1727
BseXI	GCAGC	3 cut(s)	90, 1836, 1853
BseYI	CCCAGC	1 cut(s)	171
Bsh1236I	CGCG	6 cut(s)	106, 138, 315, 337, 339, 419
BshFI	GGCC	6 cut(s)	62, 1015, 1139, 1772, 1965, 2124
BshNI	GGYRCC	1 cut(s)	95
BshVI	ATCGAT	1 cut(s)	539
BsiHKAI	GWGCWC	1 cut(s)	321
BsiHKCI	CYCGRG	2 cut(s)	227, 1141
BsiSI	CCGG	2 cut(s)	1016, 1130
BslFI	GGGAC	1 cut(s)	518
BslI	CCNNNNNNNGG	4 cut(s)	514, 1454, 1972, 2157
BsmAI	GTCTC	6 cut(s)	274, 573, 1826, 2028, 2092, 2131
BsmBI	CGTCTC	1 cut(s)	274
BsmFI	GGGAC	1 cut(s)	518
BsnI	GGCC	6 cut(s)	62, 1015, 1139, 1772, 1965, 2124
Bso31I	GGTCTC	2 cut(s)	573, 2092
BsoBI	CYCGRG	2 cut(s)	227, 1141
Bsp1286I	GDGCHC	2 cut(s)	321, 1449
Bsp13I	TCCGGA	1 cut(s)	1129
Bsp1407I	TGTACA	1 cut(s)	612
Bsp19I	CCATGG	2 cut(s)	18, 1802
BspACI	CCGC	8 cut(s)	76, 313, 358, 435, 438, 564, 837, 2205
BspANI	GGCC	6 cut(s)	62, 1015, 1139, 1772, 1965, 2124
BspCNI	CTCAG	3 cut(s)	1379, 1630, 2083
BspDI	ATCGAT	1 cut(s)	539
BspEI	TCCGGA	1 cut(s)	1129
BspFNI	CGCG	6 cut(s)	106, 138, 315, 337, 339, 419
BspLI	GGNNCC	6 cut(s)	30, 97, 506, 1014, 1020, 1140
BspMAI	CTGCAG	2 cut(s)	1326, 1854
BspMI	ACCTGC	2 cut(s)	287, 739
BspPI	GGATC	7 cut(s)	23, 36, 153, 499, 1013, 1026, 1121
BspQI	GCTCTTC	1 cut(s)	725
BspT107I	GGYRCC	1 cut(s)	95
BspTNI	GGTCTC	2 cut(s)	573, 2092
BsrGI	TGTACA	1 cut(s)	612
BsrI	ACTGG	3 cut(s)	1204, 1501, 1727
BssECI	CCNNGG	7 cut(s)	18, 141, 219, 306, 567, 1802, 2151
BssNI	GRCGYC	5 cut(s)	90, 96, 246, 399, 1292
BssSI	CACGAG	2 cut(s)	116, 1565
BssT1I	CCWWGG	4 cut(s)	18, 141, 306, 1802
Bst2BI	CACGAG	2 cut(s)	116, 1565
Bst2UI	CCWGG	2 cut(s)	221, 2134
Bst4CI	ACNGT	7 cut(s)	36, 333, 1056, 1283, 1516, 1708, 2029
Bst6I	CTCTTC	3 cut(s)	725, 801, 1937
BstACI	GRCGYC	5 cut(s)	90, 96, 246, 399, 1292
BstAPI	GCANNNNNTGC	1 cut(s)	387
BstAUI	TGTACA	1 cut(s)	612
BstBAI	YACGTR	1 cut(s)	1718
BstDEI	CTNAG	6 cut(s)	939, 1366, 1638, 2077, 2091, 2174
BstDSI	CCRYGG	3 cut(s)	18, 567, 1802
BstF5I	GGATG	3 cut(s)	687, 1309, 1537
BstFNI	CGCG	6 cut(s)	106, 138, 315, 337, 339, 419
BstH2I	RGCGCY	3 cut(s)	99, 178, 306
BstMAI	GTCTC	6 cut(s)	274, 573, 1826, 2028, 2092, 2131
BstMWI	GCNNNNNNNGC	8 cut(s)	387, 396, 416, 616, 741, 1145, 1778, 2204
BstNI	CCWGG	2 cut(s)	221, 2134
BstNSI	RCATGY	1 cut(s)	1274
BstSCI	CCNGG	2 cut(s)	219, 2132
BstSFI	CTRYAG	2 cut(s)	1322, 1850
BstUI	CGCG	6 cut(s)	106, 138, 315, 337, 339, 419
BstV1I	GCAGC	3 cut(s)	90, 1836, 1853
BstX2I	RGATCY	3 cut(s)	28, 145, 1018
BstYI	RGATCY	3 cut(s)	28, 145, 1018
Bsu15I	ATCGAT	1 cut(s)	539
BsuI	GTATCC	1 cut(s)	1730
BsuRI	GGCC	6 cut(s)	62, 1015, 1139, 1772, 1965, 2124
BsuTUI	ATCGAT	1 cut(s)	539
BtgI	CCRYGG	3 cut(s)	18, 567, 1802
BtrI	CACGTC	3 cut(s)	73, 256, 298
BtsCI	GGATG	3 cut(s)	687, 1309, 1537
BtsI	GCAGTG	1 cut(s)	1586
BtsIMutI	CAGTG	3 cut(s)	1374, 1586, 1734
BveI	ACCTGC	2 cut(s)	287, 739
Cfr13I	GGNCC	8 cut(s)	61, 223, 310, 505, 571, 1013, 1138, 2123
ClaI	ATCGAT	1 cut(s)	539
CseI	GACGC	7 cut(s)	112, 254, 328, 374, 388, 425, 2026
Csp6I	GTAC	3 cut(s)	613, 1414, 1500
CviQI	GTAC	3 cut(s)	613, 1414, 1500
DdeI	CTNAG	6 cut(s)	939, 1366, 1638, 2077, 2091, 2174
DinI	GGCGCC	1 cut(s)	97
DraI	TTTAAA	1 cut(s)	2188
DrdI	GACNNNNNNGTC	1 cut(s)	371
DriI	GACNNNNNGTC	1 cut(s)	430
DseDI	GACNNNNNNGTC	1 cut(s)	371
Eam1104I	CTCTTC	3 cut(s)	725, 801, 1937
Eam1105I	GACNNNNNGTC	1 cut(s)	430
EarI	CTCTTC	3 cut(s)	725, 801, 1937
EciI	GGCGGA	2 cut(s)	347, 424
Ecl136II	GAGCTC	1 cut(s)	319
Eco130I	CCWWGG	4 cut(s)	18, 141, 306, 1802
Eco147I	AGGCCT	1 cut(s)	1965
Eco24I	GRGCYC	2 cut(s)	321, 1449
Eco31I	GGTCTC	2 cut(s)	573, 2092
Eco32I	GATATC	1 cut(s)	1347
Eco47I	GGWCC	4 cut(s)	223, 310, 505, 571
Eco47III	AGCGCT	1 cut(s)	176
Eco53kI	GAGCTC	1 cut(s)	319
Eco57I	CTGAAG	2 cut(s)	857, 1952
Eco88I	CYCGRG	2 cut(s)	227, 1141
EcoICRI	GAGCTC	1 cut(s)	319
EcoO109I	RGGNCCY	3 cut(s)	61, 223, 2123
EcoRI	GAATTC	4 cut(s)	698, 1678, 1904, 2116
EcoRII	CCWGG	2 cut(s)	219, 2132
EcoRV	GATATC	1 cut(s)	1347
EcoT14I	CCWWGG	4 cut(s)	18, 141, 306, 1802
EcoT38I	GRGCYC	2 cut(s)	321, 1449
EgeI	GGCGCC	1 cut(s)	97
EheI	GGCGCC	1 cut(s)	97
ErhI	CCWWGG	4 cut(s)	18, 141, 306, 1802
Esp3I	CGTCTC	1 cut(s)	274
FalI	AAGNNNNNCTT	2 cut(s)	1454, 1486
FaqI	GGGAC	1 cut(s)	518
FauNDI	CATATG	1 cut(s)	585
Fnu4HI	GCNGC	7 cut(s)	79, 438, 564, 838, 1842, 1850, 2205
FokI	GGATG	3 cut(s)	694, 1316, 1544
FriOI	GRGCYC	2 cut(s)	321, 1449
Fsp4HI	GCNGC	7 cut(s)	79, 438, 564, 838, 1842, 1850, 2205
FspBI	CTAG	2 cut(s)	1643, 2010
FspI	TGCGCA	1 cut(s)	963
GluI	GCNGC	7 cut(s)	79, 438, 564, 838, 1842, 1850, 2205
GsaI	CCCAGC	1 cut(s)	175
GsuI	CTGGAG	3 cut(s)	184, 191, 2155
HaeII	RGCGCY	3 cut(s)	99, 178, 306
HaeIII	GGCC	6 cut(s)	62, 1015, 1139, 1772, 1965, 2124
HapII	CCGG	2 cut(s)	1016, 1130
HgaI	GACGC	7 cut(s)	112, 254, 328, 374, 388, 425, 2026
Hin1I	GRCGYC	5 cut(s)	90, 96, 246, 399, 1292
HincII	GTYRAC	3 cut(s)	343, 754, 1955
HindII	GTYRAC	3 cut(s)	343, 754, 1955
HindIII	AAGCTT	2 cut(s)	527, 1671
HpaII	CCGG	2 cut(s)	1016, 1130
HphI	GGTGA	4 cut(s)	76, 685, 2008, 2123
Hpy166II	GTNNAC	5 cut(s)	343, 571, 615, 754, 1955
Hpy8I	GTNNAC	5 cut(s)	343, 571, 615, 754, 1955
HpyAV	CCTTC	4 cut(s)	664, 1243, 1332, 1976
HpyCH4III	ACNGT	7 cut(s)	36, 333, 1056, 1283, 1516, 1708, 2029
HpyCH4IV	ACGT	7 cut(s)	72, 90, 255, 267, 297, 1292, 1717
HpyF10VI	GCNNNNNNNGC	8 cut(s)	387, 396, 416, 616, 741, 1145, 1778, 2204
HpyF3I	CTNAG	6 cut(s)	939, 1366, 1638, 2077, 2091, 2174
HpySE526I	ACGT	7 cut(s)	72, 90, 255, 267, 297, 1292, 1717
Hsp92I	GRCGYC	5 cut(s)	90, 96, 246, 399, 1292
KasI	GGCGCC	1 cut(s)	95
Kpn2I	TCCGGA	1 cut(s)	1129
LguI	GCTCTTC	1 cut(s)	725
LmnI	GCTCC	7 cut(s)	182, 357, 496, 724, 1033, 1576, 1690
Lsp1109I	GCAGC	3 cut(s)	90, 1836, 1853
LweI	GCATC	3 cut(s)	399, 1053, 1926
MaeI	CTAG	2 cut(s)	1643, 2010
MaeII	ACGT	7 cut(s)	72, 90, 255, 267, 297, 1292, 1717
MaeIII	GTNAC	2 cut(s)	1708, 1854
MflI	RGATCY	3 cut(s)	28, 145, 1018
MhlI	GDGCHC	2 cut(s)	321, 1449
MluCI	AATT	8 cut(s)	443, 698, 775, 1678, 1899, 1904, 1929, 2116
Mly113I	GGCGCC	1 cut(s)	96
MlyI	GAGTC	5 cut(s)	14, 32, 440, 479, 527
MmeI	TCCRAC	6 cut(s)	6, 204, 267, 288, 453, 930
MroI	TCCGGA	1 cut(s)	1129
MroXI	GAANNNNTTC	1 cut(s)	1946
MseI	TTAA	6 cut(s)	783, 1115, 1554, 1794, 1914, 2187
MslI	CAYNNNNRTG	2 cut(s)	588, 2057
MspA1I	CMGCKG	2 cut(s)	1607, 1972
MspI	CCGG	2 cut(s)	1016, 1130
MspR9I	CCNGG	2 cut(s)	221, 2134
MvaI	CCWGG	2 cut(s)	221, 2134
MvnI	CGCG	6 cut(s)	106, 138, 315, 337, 339, 419
MwoI	GCNNNNNNNGC	8 cut(s)	387, 396, 416, 616, 741, 1145, 1778, 2204
NarI	GGCGCC	1 cut(s)	96
NcoI	CCATGG	2 cut(s)	18, 1802
NdeI	CATATG	1 cut(s)	585
NlaIV	GGNNCC	6 cut(s)	30, 97, 506, 1014, 1020, 1140
NmeAIII	GCCGAG	2 cut(s)	1798, 2176
NmuCI	GTSAC	2 cut(s)	1708, 1854
NsbI	TGCGCA	1 cut(s)	963
NspI	RCATGY	1 cut(s)	1274
PaeR7I	CTCGAG	1 cut(s)	227
PaqCI	CACCTGC	1 cut(s)	287
PceI	AGGCCT	1 cut(s)	1965
PciSI	GCTCTTC	1 cut(s)	725
PcsI	WCGNNNNNNNCGW	6 cut(s)	32, 240, 252, 294, 369, 372
PdmI	GAANNNNTTC	1 cut(s)	1946
PfeI	GAWTC	6 cut(s)	485, 536, 887, 1880, 1947, 2095
PflFI	GACNNNGTC	2 cut(s)	296, 398
PflMI	CCANNNNNTGG	1 cut(s)	514
PkrI	GCNGC	7 cut(s)	80, 439, 565, 839, 1843, 1851, 2206
PleI	GAGTC	5 cut(s)	13, 31, 439, 478, 526
PluTI	GGCGCC	1 cut(s)	99
PpsI	GAGTC	5 cut(s)	13, 31, 439, 478, 526
Ppu21I	YACGTR	1 cut(s)	1718
PpuMI	RGGWCCY	1 cut(s)	223
Psp124BI	GAGCTC	1 cut(s)	321
Psp5II	RGGWCCY	1 cut(s)	223
Psp6I	CCWGG	2 cut(s)	219, 2132
PspFI	CCCAGC	1 cut(s)	171
PspGI	CCWGG	2 cut(s)	219, 2132
PspN4I	GGNNCC	6 cut(s)	30, 97, 506, 1014, 1020, 1140
PspPI	GGNCC	8 cut(s)	61, 223, 310, 505, 571, 1013, 1138, 2123
PspPPI	RGGWCCY	1 cut(s)	223
PstI	CTGCAG	2 cut(s)	1326, 1854
PsuI	RGATCY	3 cut(s)	28, 145, 1018
PsyI	GACNNNGTC	2 cut(s)	296, 398
PvuII	CAGCTG	2 cut(s)	1607, 1972
RsaI	GTAC	3 cut(s)	614, 1415, 1501
RsaNI	GTAC	3 cut(s)	613, 1414, 1500
RseI	CAYNNNNRTG	2 cut(s)	588, 2057
SacI	GAGCTC	1 cut(s)	321
SapI	GCTCTTC	1 cut(s)	725
SaqAI	TTAA	6 cut(s)	783, 1115, 1554, 1794, 1914, 2187
SatI	GCNGC	7 cut(s)	79, 438, 564, 838, 1842, 1850, 2205
Sau96I	GGNCC	8 cut(s)	61, 223, 310, 505, 571, 1013, 1138, 2123
SchI	GAGTC	5 cut(s)	14, 32, 440, 479, 527
ScrFI	CCNGG	2 cut(s)	221, 2134
SduI	GDGCHC	2 cut(s)	321, 1449
SfaNI	GCATC	3 cut(s)	399, 1053, 1926
SfcI	CTRYAG	2 cut(s)	1322, 1850
SfoI	GGCGCC	1 cut(s)	97
Sfr274I	CTCGAG	1 cut(s)	227
SinI	GGWCC	4 cut(s)	223, 310, 505, 571
SlaI	CTCGAG	1 cut(s)	227
SmiMI	CAYNNNNRTG	2 cut(s)	588, 2057
SmlI	CTYRAG	3 cut(s)	227, 664, 2210
SmoI	CTYRAG	3 cut(s)	227, 664, 2210
Sse9I	AATT	8 cut(s)	443, 698, 775, 1678, 1899, 1904, 1929, 2116
SseBI	AGGCCT	1 cut(s)	1965
SsiI	CCGC	8 cut(s)	76, 313, 358, 435, 438, 564, 837, 2205
SspDI	GGCGCC	1 cut(s)	95
SspMI	CTAG	2 cut(s)	1643, 2010
SstI	GAGCTC	1 cut(s)	321
StuI	AGGCCT	1 cut(s)	1965
StyD4I	CCNGG	2 cut(s)	219, 2132
StyI	CCWWGG	4 cut(s)	18, 141, 306, 1802
TaaI	ACNGT	7 cut(s)	36, 333, 1056, 1283, 1516, 1708, 2029
TaiI	ACGT	7 cut(s)	75, 93, 258, 270, 300, 1295, 1720
TasI	AATT	8 cut(s)	443, 698, 775, 1678, 1899, 1904, 1929, 2116
TatI	WGTACW	1 cut(s)	612
TauI	GCSGC	4 cut(s)	440, 566, 840, 2207
TfiI	GAWTC	6 cut(s)	485, 536, 887, 1880, 1947, 2095
Tru1I	TTAA	6 cut(s)	783, 1115, 1554, 1794, 1914, 2187
Tru9I	TTAA	6 cut(s)	783, 1115, 1554, 1794, 1914, 2187
TscAI	CASTG	3 cut(s)	1374, 1586, 1734
TseFI	GTSAC	2 cut(s)	1708, 1854
TseI	GCWGC	3 cut(s)	78, 1841, 1849
Tsp45I	GTSAC	2 cut(s)	1708, 1854
TspDTI	ATGAA	6 cut(s)	592, 602, 1081, 1811, 1872, 1876
TspGWI	ACGGA	3 cut(s)	1100, 1517, 1712
TspRI	CASTG	3 cut(s)	1374, 1586, 1734
Tth111I	GACNNNGTC	2 cut(s)	296, 398
Van91I	CCANNNNNTGG	1 cut(s)	514
VpaK11BI	GGWCC	4 cut(s)	223, 310, 505, 571
XapI	RAATTY	5 cut(s)	443, 698, 1678, 1904, 2116
XceI	RCATGY	1 cut(s)	1274
XcmI	CCANNNNNNNNNTGG	1 cut(s)	16
XhoI	CTCGAG	1 cut(s)	227
XmnI	GAANNNNTTC	1 cut(s)	1946
XspI	CTAG	2 cut(s)	1643, 2010
ZraI	GACGTC	2 cut(s)	91, 1293

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.