Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001795

Physical Location & Seq

Genomic Coordinates Reverse (-)

35248699 .. 35251261

Gene Structure 2563 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G023980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGTTCGTGCAGAGGTTTATGCAGATTGAATCGGAGTATCATCGGGATTATTCGGGGGGTTCGGAGGAGCAGAGGGATCAGCTCATGGAGTCGAAGAAGCAGTTAGAATCGATTGAGGGTCTACAAGCTTATGTGAGTTACTGGAGGAAGGTGATTGGGATGAGATCGAGGCTCGAATTCGAGCATTTGATGGAGCACAAGAACAATCAGCAGGTTAATTTTGTGCAGTGTTTGACCAATTTGTTCAAGGACATTGTGTTGGCAATTGAAGAGAATGATGAGATTTTGAGGGGGCTTTGTGGGGAAGATGGGATTGTTTATGCCATCTGTGAACTTCAAGAGGAGTGTGATTCGAGGGGGACTTTGATTCTGAACAAGTATATGGAGTATAGGAGATTACCAAAGTTGTCGTCGGAGATCAATGCACAGAATATGAATTTGCTTGATGTTGGTGTTGCTGGTGTTGGGTCTGAGGGGCCTGACCCGAGAGAGGTTGAGCTTATATTGGAGGAGATACTGTCTTTGATGCAGTTGGGTGAGGATTATACTGAATTCATGGTGTCCAAGATCAAGGGCTTGAGTAATGTGGATCCGGATTTAGCGCCGAGAGCAACCAAGTCTTTTAGGAGTGGAAGTTTTAGCAAAGTGGTTCAGGACATTACTGGGTTTTATGTCATATTAGAGGGTTTCTTTATGGTTGAGAATCATGTGCCTGACAGTCTTACCACTTCTATGGTGGATGATGTTTTCTACGTTCTGCAGAGTTGCTTGCGAAGGGCGATATCCACTTTGAATATCAGCTCAGTGATTGCTGTGTTGAGTGGTGCCGGTAGTTTGTTGAGTAATGAGTACCATGAAGCTTTGCAACACAAGATGAGAGAGCCCAATCTTGGTGCGGAGCTGTTCTTGGGTGGTGTTGGTGTTCAAAAGACTGGCACAGAGATTGCCACGGTTTTGAATAATATGGATGTGAGTAGTGAGTACGTGCTCAAACTGAAACACGAAATTGAGGAGCAATGTTTGCAAGTATTTCCTGCACCGGCTGATAGAGAAAAAGTTAAGTCTTGTTTGTCCGAGTTAGGGGATATGAGCAACACATTCAAGCAAACTGTGAATGCAGGCTTGGAGCAACTTGTGGCAACTGTGACACCACATATCCGTCCAGTGCTTGATAATGTTGCAACCATCAGCTATGAGCTATCAGAGGCTGAATATGCAGATAATGAGGTTAATAACCCATGGGTTCAAGGGCTTCTTCATGCTGTTGAGACGAATGCAGCATGGCTGCAGTCACTAATGACTGCCAACAACTACAATTCGTTCATACATTTGATAATTGAATTCCTTGTGAAGAGGCTTGAAGTAATTATGATGCAGAAAAGGTTTAGTCAACTTGGAGGCCTTCAGCTGGACAGAGATTGTAGGGCATTGGTGAGCCACTTTTCTAGCATGACTCAAAGAACTGTTAGAGACAAGTTTGCTCGGCTAACTCAACTGGCAACCATCCTCAACTTCGAAGAGGTCTCTGAGATTCTGGATTTCTGGGGTGAGAATTCAGGACCTATGACCTGGAGACTGACACCTGCCGAGGTCAGGCGAGTTTTGGGTCTGAGAGTTGATTTTAAATCCGAAGCAATTGCCGCCCTCAAGTTGCAATTCCTGCTGAACCGATACTTCTCCTTCATATTTTTATTTTTTTCCTCTTCAAAAAGATTTTGCAATGTTGTTCGATCAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000301 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006890 GO:0006891 GO:0006996 GO:0007030 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0016070 GO:0016192 GO:0016787 GO:0016788 GO:0017119 GO:0022607 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048193 GO:0048213 GO:0051179 GO:0051234 GO:0065003 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0099023 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG4 PPR PPR_2 RINT1_TIP1

Protein Analysis

579

Amino Acids

65.79

Weight (kDa)

5.12

Isoelectric Point (pI)

49.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG4_m	PF08318	39 - 292	1.1e-60	COG4 transport protein, middle alpha-helical bundle
COG4_C	PF20662	317 - 533	9.8e-62	Conserved oligomeric Golgi complex subunit 4, C-terminal
RINT1_TIP1	PF04437	365 - 507	1.8e-08	RINT-1/TIP-1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01395
fragaria_vesca	FvH4_4g00571 FvH4_5g29942 FvH4_5g30911 FvH4_7g17670
malus_domestica	MD07G1159700.v1.1 MD07G1159800.v1.1 MD07G1159900.v1.1
prunus_persica	Prupe.2G092100_v2.0.a1 Prupe.2G197800_v2.0.a1 Prupe.2G197800_v2.0.a1
pyrus_communis	pycom01g11300 pycom07g15620
rosa_chinensis	RchiOBHm_Chr1g0334501 RchiOBHm_Chr1g0334511
rosa_laevigata	RLG00000014722 RLG00000018723 RLG00000027257 RLG00000029448
rosa_multiflora	Rmu_co8086664.1_g000001 Rmu_sc0000066.1_g000041 Rmu_sc0003541.1_g000019 Rmu_sc0005302.1_g000007 Rmu_sc0005482.1_g000008 Rmu_sc0007236.1_g000001 Rmu_sc0012136.1_g000029 Rmu_sc0012270.1_g000004 Rmu_sc0033476.1_g000001 Rmu_sc0034305.1_g000001 Rmu_ssc0000404.1_g000010
rosa_roxburghii	Rroxscaffold_2G00120980 Rroxscaffold_4G00294850 Rroxscaffold_4G00316790 Rroxscaffold_5G00373360
rosa_rugosa	Rorug01G0114400 Rorug01G0114500 Rorug02G0242900 Rorug02G0243000
rosa_samantha	Rh1AG139600 Rh1AG176800 Rh1BG105900 Rh1CG131500 Rh1DG143500 Rh6BG398800 Rh7BG198900
rosa_wichuraiana	Rw1G011510 Rw2G023980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1591
Acc36I	ACCTGC	2 cut(s)	202, 1591
AccB1I	GGYRCC	1 cut(s)	824
AccI	GTMKAC	1 cut(s)	121
AccIII	TCCGGA	1 cut(s)	592
AciI	CCGC	2 cut(s)	896, 1641
AclWI	GGATC	3 cut(s)	84, 584, 597
AcsI	RAATTY	5 cut(s)	176, 436, 551, 1340, 1552
AcuI	CTGAAG	1 cut(s)	1388
AfaI	GTAC	2 cut(s)	851, 983
AfiI	CCNNNNNNNGG	5 cut(s)	490, 890, 1080, 1408, 1593
AjnI	CCWGG	1 cut(s)	1568
AjuI	GAANNNNNNNTTGG	2 cut(s)	1106, 1138
AluBI	AGCT	9 cut(s)	82, 128, 499, 801, 860, 901, 1191, 1198, 1408
AluI	AGCT	9 cut(s)	82, 128, 499, 801, 860, 901, 1191, 1198, 1408
Alw21I	GWGCWC	2 cut(s)	198, 990
Alw26I	GTCTC	4 cut(s)	1262, 1464, 1528, 1567
AlwI	GGATC	3 cut(s)	84, 584, 597
AlwNI	CAGNNNCTG	1 cut(s)	1208
Ama87I	CYCGRG	1 cut(s)	484
Aor13HI	TCCGGA	1 cut(s)	592
AoxI	GGCC	2 cut(s)	476, 1399
ApeKI	GCWGC	2 cut(s)	1277, 1285
ApoI	RAATTY	5 cut(s)	176, 436, 551, 1340, 1552
ArsI	GACNNNNNNTTYG	2 cut(s)	395, 427
AspLEI	GCGC	1 cut(s)	604
AspS9I	GGNCC	2 cut(s)	476, 1559
AsuHPI	GGTGA	4 cut(s)	163, 548, 1444, 1559
AsuII	TTCGAA	1 cut(s)	1515
AvaI	CYCGRG	1 cut(s)	484
AvaII	GGWCC	1 cut(s)	1559
BamHI	GGATCC	1 cut(s)	589
BanI	GGYRCC	1 cut(s)	824
BanII	GRGCYC	1 cut(s)	885
Bbv12I	GWGCWC	2 cut(s)	198, 990
BbvI	GCAGC	2 cut(s)	1272, 1289
BccI	CCATC	5 cut(s)	184, 302, 332, 1193, 1511
BcgI	CGANNNNNNTGC	2 cut(s)	1619, 1653
BciT130I	CCWGG	1 cut(s)	1570
BcoDI	GTCTC	4 cut(s)	1262, 1464, 1528, 1567
BfaI	CTAG	1 cut(s)	1446
BfmI	CTRYAG	2 cut(s)	758, 1286
BfoI	RGCGCY	1 cut(s)	605
BfuAI	ACCTGC	2 cut(s)	202, 1591
BisI	GCNGC	3 cut(s)	1278, 1286, 1641
BlsI	GCNGC	3 cut(s)	1279, 1287, 1642
Bme1390I	CCNGG	1 cut(s)	1570
Bme18I	GGWCC	1 cut(s)	1559
BmeT110I	CYCGRG	1 cut(s)	484
BmgT120I	GGNCC	2 cut(s)	476, 1559
BmiI	GGNNCC	3 cut(s)	477, 591, 826
BmrFI	CCNGG	1 cut(s)	1570
BmrI	ACTGGG	1 cut(s)	672
BmsI	GCATC	2 cut(s)	516, 1362
BmuI	ACTGGG	1 cut(s)	672
BpmI	CTGGAG	2 cut(s)	163, 1591
Bpu14I	TTCGAA	1 cut(s)	1515
BpuEI	CTTGAG	2 cut(s)	598, 1631
Bsa29I	ATCGAT	1 cut(s)	110
BsaAI	YACGTR	1 cut(s)	985
BsaI	GGTCTC	1 cut(s)	1528
BsaJI	CCNNGG	3 cut(s)	948, 1238, 1587
BsaWI	WCCGGW	1 cut(s)	592
BsaXI	ACNNNNNCTCC	4 cut(s)	503, 533, 619, 649
Bsc4I	CCNNNNNNNGG	5 cut(s)	490, 890, 1080, 1408, 1593
Bse118I	RCCGGY	2 cut(s)	827, 1039
Bse1I	ACTGG	5 cut(s)	146, 667, 937, 1163, 1500
Bse3DI	GCAATG	2 cut(s)	1022, 1726
BseAI	TCCGGA	1 cut(s)	592
BseBI	CCWGG	1 cut(s)	1570
BseCI	ATCGAT	1 cut(s)	110
BseDI	CCNNGG	3 cut(s)	948, 1238, 1587
BseGI	GGATG	4 cut(s)	165, 745, 973, 1503
BseLI	CCNNNNNNNGG	5 cut(s)	490, 890, 1080, 1408, 1593
BseMI	GCAATG	2 cut(s)	1022, 1726
BseMII	CTCAG	4 cut(s)	462, 816, 1518, 1601
BseNI	ACTGG	5 cut(s)	146, 667, 937, 1163, 1500
BseRI	GAGGAG	4 cut(s)	80, 356, 524, 1025
BseXI	GCAGC	2 cut(s)	1272, 1289
BsgI	GTGCAG	3 cut(s)	29, 245, 1020
BshFI	GGCC	2 cut(s)	478, 1401
BshNI	GGYRCC	1 cut(s)	824
BshVI	ATCGAT	1 cut(s)	110
BsiHKAI	GWGCWC	2 cut(s)	198, 990
BsiHKCI	CYCGRG	1 cut(s)	484
BsiSI	CCGG	3 cut(s)	593, 828, 1040
BslFI	GGGAC	1 cut(s)	373
BslI	CCNNNNNNNGG	5 cut(s)	490, 890, 1080, 1408, 1593
BsmAI	GTCTC	4 cut(s)	1262, 1464, 1528, 1567
BsmBI	CGTCTC	1 cut(s)	1262
BsmFI	GGGAC	1 cut(s)	373
BsmI	GAATGC	2 cut(s)	1120, 1279
BsnI	GGCC	2 cut(s)	478, 1401
Bso31I	GGTCTC	1 cut(s)	1528
BsoBI	CYCGRG	1 cut(s)	484
Bsp119I	TTCGAA	1 cut(s)	1515
Bsp1286I	GDGCHC	3 cut(s)	198, 885, 990
Bsp13I	TCCGGA	1 cut(s)	592
Bsp143I	GATC	6 cut(s)	76, 164, 417, 567, 589, 1730
Bsp19I	CCATGG	1 cut(s)	1238
BspACI	CCGC	2 cut(s)	896, 1641
BspANI	GGCC	2 cut(s)	478, 1401
BspCNI	CTCAG	4 cut(s)	463, 815, 1519, 1602
BspDI	ATCGAT	1 cut(s)	110
BspEI	TCCGGA	1 cut(s)	592
BspLI	GGNNCC	3 cut(s)	477, 591, 826
BspMAI	CTGCAG	2 cut(s)	762, 1290
BspMI	ACCTGC	2 cut(s)	202, 1591
BspPI	GGATC	3 cut(s)	84, 584, 597
BspT104I	TTCGAA	1 cut(s)	1515
BspT107I	GGYRCC	1 cut(s)	824
BsrDI	GCAATG	2 cut(s)	1022, 1726
BsrFI	RCCGGY	2 cut(s)	827, 1039
BsrI	ACTGG	5 cut(s)	146, 667, 937, 1163, 1500
BssAI	RCCGGY	2 cut(s)	827, 1039
BssECI	CCNNGG	3 cut(s)	948, 1238, 1587
BssMI	GATC	6 cut(s)	76, 164, 417, 567, 589, 1730
BssT1I	CCWWGG	1 cut(s)	1238
Bst2UI	CCWGG	1 cut(s)	1570
Bst4CI	ACNGT	6 cut(s)	519, 719, 952, 1111, 1144, 1465
Bst6I	CTCTTC	4 cut(s)	264, 1346, 1512, 1708
BstAPI	GCANNNNNTGC	2 cut(s)	1021, 1660
BstBAI	YACGTR	1 cut(s)	985
BstBI	TTCGAA	1 cut(s)	1515
BstC8I	GCNNGC	2 cut(s)	770, 1120
BstDEI	CTNAG	4 cut(s)	471, 802, 1527, 1610
BstDSI	CCRYGG	2 cut(s)	948, 1238
BstF5I	GGATG	4 cut(s)	165, 745, 973, 1503
BstH2I	RGCGCY	1 cut(s)	605
BstHHI	GCGC	1 cut(s)	604
BstKTI	GATC	6 cut(s)	79, 167, 420, 570, 592, 1733
BstMAI	GTCTC	4 cut(s)	1262, 1464, 1528, 1567
BstMBI	GATC	6 cut(s)	76, 164, 417, 567, 589, 1730
BstMWI	GCNNNNNNNGC	5 cut(s)	608, 1021, 1214, 1640, 1660
BstNI	CCWGG	1 cut(s)	1570
BstSCI	CCNGG	1 cut(s)	1568
BstSFI	CTRYAG	2 cut(s)	758, 1286
BstV1I	GCAGC	2 cut(s)	1272, 1289
BstX2I	RGATCY	1 cut(s)	589
BstXI	CCANNNNNNTGG	1 cut(s)	733
BstYI	RGATCY	1 cut(s)	589
Bsu15I	ATCGAT	1 cut(s)	110
BsuRI	GGCC	2 cut(s)	478, 1401
BsuTUI	ATCGAT	1 cut(s)	110
BtgI	CCRYGG	2 cut(s)	948, 1238
BtsCI	GGATG	4 cut(s)	165, 745, 973, 1503
BtsI	GCAGTG	1 cut(s)	233
BtsIMutI	CAGTG	3 cut(s)	233, 810, 1170
BveI	ACCTGC	2 cut(s)	202, 1591
Cac8I	GCNNGC	2 cut(s)	770, 1120
CaiI	CAGNNNCTG	1 cut(s)	1208
CfoI	GCGC	1 cut(s)	604
Cfr10I	RCCGGY	2 cut(s)	827, 1039
Cfr13I	GGNCC	2 cut(s)	476, 1559
ClaI	ATCGAT	1 cut(s)	110
Csp6I	GTAC	2 cut(s)	850, 982
CviAII	CATG	8 cut(s)	85, 556, 707, 854, 1239, 1259, 1281, 1450
CviQI	GTAC	2 cut(s)	850, 982
DdeI	CTNAG	4 cut(s)	471, 802, 1527, 1610
DpnI	GATC	6 cut(s)	78, 166, 419, 569, 591, 1732
DpnII	GATC	6 cut(s)	76, 164, 417, 567, 589, 1730
DraI	TTTAAA	1 cut(s)	1624
Eam1104I	CTCTTC	4 cut(s)	264, 1346, 1512, 1708
EarI	CTCTTC	4 cut(s)	264, 1346, 1512, 1708
Eco130I	CCWWGG	1 cut(s)	1238
Eco147I	AGGCCT	1 cut(s)	1401
Eco24I	GRGCYC	1 cut(s)	885
Eco31I	GGTCTC	1 cut(s)	1528
Eco32I	GATATC	1 cut(s)	783
Eco47I	GGWCC	1 cut(s)	1559
Eco57I	CTGAAG	1 cut(s)	1388
Eco88I	CYCGRG	1 cut(s)	484
EcoO109I	RGGNCCY	2 cut(s)	476, 1559
EcoRI	GAATTC	4 cut(s)	176, 551, 1340, 1552
EcoRII	CCWGG	1 cut(s)	1568
EcoRV	GATATC	1 cut(s)	783
EcoT14I	CCWWGG	1 cut(s)	1238
EcoT38I	GRGCYC	1 cut(s)	885
ErhI	CCWWGG	1 cut(s)	1238
Esp3I	CGTCTC	1 cut(s)	1262
FaeI	CATG	8 cut(s)	88, 559, 710, 857, 1242, 1262, 1284, 1453
FalI	AAGNNNNNCTT	2 cut(s)	1239, 1271
FaqI	GGGAC	1 cut(s)	373
FatI	CATG	8 cut(s)	84, 555, 706, 853, 1238, 1258, 1280, 1449
FblI	GTMKAC	1 cut(s)	121
Fnu4HI	GCNGC	3 cut(s)	1278, 1286, 1641
FokI	GGATG	4 cut(s)	172, 752, 980, 1490
FriOI	GRGCYC	1 cut(s)	885
Fsp4HI	GCNGC	3 cut(s)	1278, 1286, 1641
FspBI	CTAG	1 cut(s)	1446
GlaI	GCGC	1 cut(s)	603
GluI	GCNGC	3 cut(s)	1278, 1286, 1641
GsuI	CTGGAG	2 cut(s)	163, 1591
HaeII	RGCGCY	1 cut(s)	605
HaeIII	GGCC	2 cut(s)	478, 1401
HapII	CCGG	3 cut(s)	593, 828, 1040
HhaI	GCGC	1 cut(s)	604
Hin1II	CATG	8 cut(s)	88, 559, 710, 857, 1242, 1262, 1284, 1453
Hin6I	GCGC	1 cut(s)	602
HinP1I	GCGC	1 cut(s)	602
HincII	GTYRAC	1 cut(s)	1391
HindII	GTYRAC	1 cut(s)	1391
HindIII	AAGCTT	2 cut(s)	126, 858
HinfI	GANTC	8 cut(s)	29, 89, 107, 350, 367, 703, 1453, 1531
HpaII	CCGG	3 cut(s)	593, 828, 1040
HphI	GGTGA	4 cut(s)	163, 548, 1444, 1559
Hpy166II	GTNNAC	3 cut(s)	122, 332, 1391
Hpy188III	TCNNGA	6 cut(s)	44, 338, 593, 653, 1535, 1557
Hpy8I	GTNNAC	3 cut(s)	122, 332, 1391
Hpy99I	CGWCG	1 cut(s)	415
HpyAV	CCTTC	4 cut(s)	142, 768, 1412, 1690
HpyCH4III	ACNGT	6 cut(s)	519, 719, 952, 1111, 1144, 1465
HpyCH4IV	ACGT	2 cut(s)	753, 984
HpyF10VI	GCNNNNNNNGC	5 cut(s)	608, 1021, 1214, 1640, 1660
HpyF3I	CTNAG	4 cut(s)	471, 802, 1527, 1610
HpySE526I	ACGT	2 cut(s)	753, 984
Hsp92II	CATG	8 cut(s)	88, 559, 710, 857, 1242, 1262, 1284, 1453
HspAI	GCGC	1 cut(s)	602
Kpn2I	TCCGGA	1 cut(s)	592
Kzo9I	GATC	6 cut(s)	76, 164, 417, 567, 589, 1730
LmnI	GCTCC	5 cut(s)	67, 193, 898, 1012, 1126
Lsp1109I	GCAGC	2 cut(s)	1272, 1289
LweI	GCATC	2 cut(s)	516, 1362
MaeI	CTAG	1 cut(s)	1446
MaeII	ACGT	2 cut(s)	753, 984
MaeIII	GTNAC	3 cut(s)	137, 1144, 1290
MalI	GATC	6 cut(s)	78, 166, 419, 569, 591, 1732
MboI	GATC	6 cut(s)	76, 164, 417, 567, 589, 1730
MboII	GAAGA	7 cut(s)	106, 281, 317, 1247, 1363, 1529, 1695
MfeI	CAATTG	2 cut(s)	264, 1635
MflI	RGATCY	1 cut(s)	589
MhlI	GDGCHC	3 cut(s)	198, 885, 990
MlyI	GAGTC	2 cut(s)	98, 1447
MmeI	TCCRAC	1 cut(s)	393
MroI	TCCGGA	1 cut(s)	592
MseI	TTAA	4 cut(s)	216, 1059, 1230, 1623
MslI	CAYNNNNRTG	1 cut(s)	731
MspA1I	CMGCKG	1 cut(s)	1408
MspI	CCGG	3 cut(s)	593, 828, 1040
MspR9I	CCNGG	1 cut(s)	1570
MunI	CAATTG	2 cut(s)	264, 1635
Mva1269I	GAATGC	2 cut(s)	1120, 1279
MvaI	CCWGG	1 cut(s)	1570
MwoI	GCNNNNNNNGC	5 cut(s)	608, 1021, 1214, 1640, 1660
NcoI	CCATGG	1 cut(s)	1238
NdeII	GATC	6 cut(s)	76, 164, 417, 567, 589, 1730
NlaIII	CATG	8 cut(s)	88, 559, 710, 857, 1242, 1262, 1284, 1453
NlaIV	GGNNCC	3 cut(s)	477, 591, 826
NmeAIII	GCCGAG	3 cut(s)	630, 1462, 1612
NmuCI	GTSAC	2 cut(s)	1144, 1290
NspV	TTCGAA	1 cut(s)	1515
PaqCI	CACCTGC	1 cut(s)	1591
PceI	AGGCCT	1 cut(s)	1401
PctI	GAATGC	2 cut(s)	1120, 1279
PfeI	GAWTC	6 cut(s)	29, 107, 350, 367, 703, 1531
PkrI	GCNGC	3 cut(s)	1279, 1287, 1642
PleI	GAGTC	2 cut(s)	97, 1447
PpsI	GAGTC	2 cut(s)	97, 1447
Ppu21I	YACGTR	1 cut(s)	985
PpuMI	RGGWCCY	1 cut(s)	1559
Psp5II	RGGWCCY	1 cut(s)	1559
Psp6I	CCWGG	1 cut(s)	1568
PspGI	CCWGG	1 cut(s)	1568
PspN4I	GGNNCC	3 cut(s)	477, 591, 826
PspPI	GGNCC	2 cut(s)	476, 1559
PspPPI	RGGWCCY	1 cut(s)	1559
PstI	CTGCAG	2 cut(s)	762, 1290
PstNI	CAGNNNCTG	1 cut(s)	1208
PsuI	RGATCY	1 cut(s)	589
PvuII	CAGCTG	1 cut(s)	1408
RsaI	GTAC	2 cut(s)	851, 983
RsaNI	GTAC	2 cut(s)	850, 982
RseI	CAYNNNNRTG	1 cut(s)	731
SaqAI	TTAA	4 cut(s)	216, 1059, 1230, 1623
SatI	GCNGC	3 cut(s)	1278, 1286, 1641
Sau3AI	GATC	6 cut(s)	76, 164, 417, 567, 589, 1730
Sau96I	GGNCC	2 cut(s)	476, 1559
SchI	GAGTC	2 cut(s)	98, 1447
ScrFI	CCNGG	1 cut(s)	1570
SduI	GDGCHC	3 cut(s)	198, 885, 990
SfaNI	GCATC	2 cut(s)	516, 1362
SfcI	CTRYAG	2 cut(s)	758, 1286
SfuI	TTCGAA	1 cut(s)	1515
SinI	GGWCC	1 cut(s)	1559
SmiMI	CAYNNNNRTG	1 cut(s)	731
SmlI	CTYRAG	2 cut(s)	577, 1646
SmoI	CTYRAG	2 cut(s)	577, 1646
SseBI	AGGCCT	1 cut(s)	1401
SsiI	CCGC	2 cut(s)	896, 1641
SspMI	CTAG	1 cut(s)	1446
StuI	AGGCCT	1 cut(s)	1401
StyD4I	CCNGG	1 cut(s)	1568
StyI	CCWWGG	1 cut(s)	1238
TaaI	ACNGT	6 cut(s)	519, 719, 952, 1111, 1144, 1465
TaiI	ACGT	2 cut(s)	756, 987
TaqI	TCGA	8 cut(s)	92, 110, 167, 174, 180, 353, 1515, 1729
TauI	GCSGC	1 cut(s)	1643
TfiI	GAWTC	6 cut(s)	29, 107, 350, 367, 703, 1531
Tru1I	TTAA	4 cut(s)	216, 1059, 1230, 1623
Tru9I	TTAA	4 cut(s)	216, 1059, 1230, 1623
TscAI	CASTG	3 cut(s)	233, 810, 1170
TseFI	GTSAC	2 cut(s)	1144, 1290
TseI	GCWGC	2 cut(s)	1277, 1285
Tsp45I	GTSAC	2 cut(s)	1144, 1290
TspDTI	ATGAA	6 cut(s)	449, 544, 870, 1247, 1312, 1672
TspGWI	ACGGA	1 cut(s)	1148
TspRI	CASTG	3 cut(s)	233, 810, 1170
VpaK11BI	GGWCC	1 cut(s)	1559
XapI	RAATTY	5 cut(s)	176, 436, 551, 1340, 1552
XcmI	CCANNNNNNNNNTGG	1 cut(s)	733
XmiI	GTMKAC	1 cut(s)	121
XspI	CTAG	1 cut(s)	1446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.