Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001795

Physical Location & Seq

Genomic Coordinates Reverse (-)

34545720 .. 34548306

Gene Structure 2587 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018723

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGCAGATTGAATCGGAGTATCATCGGGATTATTCGGGGGGTTCGGAGGAGCAGAGGGATCAGCTCATGGAGTCGAAGAAGCAGCTCGAATCGATTGTGAAGAAGAAGCTATCTACAGCCGTGGACCAGAGAGGCCATCCCAGTGTGCTGAGGTTCATTAGGCTCTACACGCCTTTAGGGATAGAAGAGGAGGGTCTACAAGCTTATGTGAGTTACTTGAGGAAGGTGATTGGGATGAGATCGAGGCTCGAATTCGAGCATTTGATGGAGCACAACAATCAGAACCAGCAGGTTAATTTTGTGGGATGTTTGACCAATTTGTTCAAGGACATTGTGTTGGCAATTGAAGAGAATGATGAGATTTTGAGGGGGCTCTGTGGGGAAGATGGGATTGTTTATGCCATCTGTGAACTTCAAGAGGAGTGTGATTCGAGGGGGACTTTGATTCTGAATAAGTATATGGAGTATAGGAAATTGCCAAAGTTATCGTCGGAAATCAATGCACAGAATATGAATTTGCTTGATGTTGGTGTTGTTGGTGTTGGCTGTGAGGGCCCTGACCCGAGAGAGGTTGAGCTTGTATTGGAGGAGATACTGTCTTTGATGCAGTTGGGTGAGGACTACACTGAATTCATGGTGTCTAAGATCGAGGGCTTGAGTAATGTGGATCCGGATTTAGCGCCGAGAGCAACCAAGTCTTTTAGGAGTGGAAGTTTTAGCAATGTGGTTCAGGACATTGCTGGCTTTTATGTCATATTAGAGGGTTTCTTTATGGTTGAGAATTTGAGAAAGGCTATAAGGATTGATGAGCATGTGCCTGACAGTCTTACCACTTCTATGGTGGATGATGTTTTCTATGTTCTGCAGAGTTGCTTGCGAAGGGTGATATCCACTTTGAATATCAGCTCAGTGATTGCTGTGTTGAGTGGTGCCGGTAGTTTGTTGAGTAATGAGTACCATGAAGCTTTGCAACACAAGATGAGAGAGCCCAATCTTGGTGCAAAGCTGTTCTTGGGTGGTGTTGGTGTTCAAAAGACTGGCACAGAGATTGCCACGGTTTTGAATAATATGGATGTGAGTAGTGAGTATGTGCTCAAACTGAAACACGAAATTGAGGAGCAATGTTTGGAAGTATTTCCTGCACCAGCTGATAGAGAAAAAGTTAAGTCTTGTTTGTCCGAGTTAGGGGATATGAGCAACACATTCAAGCAAGCTTTGAATGCTGGCTTGGAGCAACTTGTGGCAACTGTGACACCACGTATCCGTCCAGTGCTTGATAATGTTGCAACCATCAGCTATGAGCTATCAGAGGCTGAATATGCGGATAATGAGGTTAATGACCCATGGGTTCAAGGGCTTCTTCATGCTGTTGAGACGAATGCAGCATGGCTGCAGTCACTAATGACTGCCAACAACTACGATTCGTTCATACATTTGATAATTGAATTCCTTGTGAAGAGGCTTGAAGTTATTATGATGCAGAAAAGATTTAGTCAACTTGGAGGCCTTCAGCTGGACAGAGATTGTAGGGCATTGGTGAGCCACTTTTCTAGCATGACTCAAAGAACTGTTAGAGACAAGTTTGCTCGGCTCACTCAACTGGCAACCATCCTCAACTTAGAAAAGGTCTCTGAGATTCTGGATTTCTGGGGTGAGAATTCAGGACCTATGACCTGGAGACTGACACCAGCCGATGTCAGGCGAGTTTTGGGTCTGAGAGTTGATTTTAAATCCGAAGCAATTGCCGCCCTCAAGTTGTATTCCCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000301 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006890 GO:0006891 GO:0006996 GO:0007030 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0016070 GO:0016192 GO:0016787 GO:0016788 GO:0017119 GO:0022607 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048193 GO:0048213 GO:0051179 GO:0051234 GO:0065003 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0099023 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG4 PPR PPR_2 RINT1_TIP1

Protein Analysis

590

Amino Acids

66.43

Weight (kDa)

5.0

Isoelectric Point (pI)

46.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG4_m	PF08318	51 - 327	4e-73	COG4 transport protein, middle alpha-helical bundle
COG4_C	PF20662	352 - 568	1.9e-62	Conserved oligomeric Golgi complex subunit 4, C-terminal
RINT1_TIP1	PF04437	403 - 543	1.2e-08	RINT-1/TIP-1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01395
fragaria_vesca	FvH4_4g00571 FvH4_5g29942 FvH4_5g30911 FvH4_7g17670
malus_domestica	MD07G1159700.v1.1 MD07G1159800.v1.1 MD07G1159900.v1.1
prunus_persica	Prupe.2G092100_v2.0.a1 Prupe.2G197800_v2.0.a1 Prupe.2G197800_v2.0.a1
pyrus_communis	pycom01g11300 pycom07g15620
rosa_chinensis	RchiOBHm_Chr1g0334501 RchiOBHm_Chr1g0334511
rosa_laevigata	RLG00000014722 RLG00000018723 RLG00000027257 RLG00000029448
rosa_multiflora	Rmu_co8086664.1_g000001 Rmu_sc0000066.1_g000041 Rmu_sc0003541.1_g000019 Rmu_sc0005302.1_g000007 Rmu_sc0005482.1_g000008 Rmu_sc0007236.1_g000001 Rmu_sc0012136.1_g000029 Rmu_sc0012270.1_g000004 Rmu_sc0033476.1_g000001 Rmu_sc0034305.1_g000001 Rmu_ssc0000404.1_g000010
rosa_roxburghii	Rroxscaffold_2G00120980 Rroxscaffold_4G00294850 Rroxscaffold_4G00316790 Rroxscaffold_5G00373360
rosa_rugosa	Rorug01G0114400 Rorug01G0114500 Rorug02G0242900 Rorug02G0243000
rosa_samantha	Rh1AG139600 Rh1AG176800 Rh1BG105900 Rh1CG131500 Rh1DG143500 Rh6BG398800 Rh7BG198900
rosa_wichuraiana	Rw1G011510 Rw2G023980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	280
AccB1I	GGYRCC	1 cut(s)	929
AccI	GTMKAC	1 cut(s)	196
AccIII	TCCGGA	1 cut(s)	670
AciI	CCGC	2 cut(s)	1322, 1746
AclWI	GGATC	3 cut(s)	66, 662, 675
AcsI	RAATTY	6 cut(s)	251, 514, 629, 781, 1445, 1657
AcuI	CTGAAG	1 cut(s)	1493
AfaI	GTAC	1 cut(s)	956
AfiI	CCNNNNNNNGG	5 cut(s)	568, 995, 1185, 1513, 1698
AjnI	CCWGG	1 cut(s)	1673
AjuI	GAANNNNNNNTTGG	2 cut(s)	1211, 1243
Alw21I	GWGCWC	2 cut(s)	273, 1095
Alw26I	GTCTC	4 cut(s)	1367, 1569, 1633, 1672
AlwI	GGATC	3 cut(s)	66, 662, 675
AlwNI	CAGNNNCTG	1 cut(s)	1313
Ama87I	CYCGRG	1 cut(s)	562
Aor13HI	TCCGGA	1 cut(s)	670
AoxI	GGCC	3 cut(s)	133, 553, 1504
ApaI	GGGCCC	1 cut(s)	557
ApeKI	GCWGC	3 cut(s)	82, 1382, 1390
ApoI	RAATTY	6 cut(s)	251, 514, 629, 781, 1445, 1657
ArsI	GACNNNNNNTTYG	2 cut(s)	473, 505
Asp700I	GAANNNNTTC	1 cut(s)	1134
AspLEI	GCGC	1 cut(s)	682
AspS9I	GGNCC	4 cut(s)	124, 553, 554, 1664
AsuHPI	GGTGA	5 cut(s)	238, 626, 895, 1549, 1664
AvaI	CYCGRG	1 cut(s)	562
AvaII	GGWCC	2 cut(s)	124, 1664
BaeGI	GKGCMC	1 cut(s)	557
BamHI	GGATCC	1 cut(s)	667
BanI	GGYRCC	1 cut(s)	929
BanII	GRGCYC	3 cut(s)	375, 557, 990
Bbv12I	GWGCWC	2 cut(s)	273, 1095
BbvCI	CCTCAGC	1 cut(s)	149
BbvI	GCAGC	3 cut(s)	94, 1377, 1394
BccI	CCATC	6 cut(s)	144, 259, 380, 410, 1298, 1616
BceAI	ACGGC	1 cut(s)	104
BcgI	CGANNNNNNTGC	2 cut(s)	1724, 1758
BciT130I	CCWGG	1 cut(s)	1675
BciVI	GTATCC	1 cut(s)	1271
BcoDI	GTCTC	4 cut(s)	1367, 1569, 1633, 1672
BfaI	CTAG	1 cut(s)	1551
BfmI	CTRYAG	3 cut(s)	114, 863, 1391
BfoI	RGCGCY	1 cut(s)	683
BfuAI	ACCTGC	1 cut(s)	280
BfuI	GTATCC	1 cut(s)	1271
BisI	GCNGC	4 cut(s)	83, 1383, 1391, 1746
BlsI	GCNGC	4 cut(s)	84, 1384, 1392, 1747
Bme1390I	CCNGG	1 cut(s)	1675
Bme18I	GGWCC	2 cut(s)	124, 1664
BmeT110I	CYCGRG	1 cut(s)	562
BmgT120I	GGNCC	4 cut(s)	124, 553, 554, 1664
BmiI	GGNNCC	3 cut(s)	555, 669, 931
BmrFI	CCNGG	1 cut(s)	1675
BmrI	ACTGGG	1 cut(s)	135
BmsI	GCATC	2 cut(s)	594, 1467
BmuI	ACTGGG	1 cut(s)	135
BpmI	CTGGAG	1 cut(s)	1696
Bpu10I	CCTNAGC	1 cut(s)	149
BpuEI	CTTGAG	3 cut(s)	238, 676, 1736
Bsa29I	ATCGAT	1 cut(s)	92
BsaAI	YACGTR	1 cut(s)	1259
BsaI	GGTCTC	1 cut(s)	1633
BsaJI	CCNNGG	3 cut(s)	120, 1053, 1343
BsaWI	WCCGGW	1 cut(s)	670
BsaXI	ACNNNNNCTCC	4 cut(s)	581, 611, 697, 727
Bsc4I	CCNNNNNNNGG	5 cut(s)	568, 995, 1185, 1513, 1698
Bse118I	RCCGGY	1 cut(s)	932
Bse1I	ACTGG	4 cut(s)	141, 1042, 1268, 1605
Bse3DI	GCAATG	3 cut(s)	727, 735, 1127
BseAI	TCCGGA	1 cut(s)	670
BseBI	CCWGG	1 cut(s)	1675
BseCI	ATCGAT	1 cut(s)	92
BseDI	CCNNGG	3 cut(s)	120, 1053, 1343
BseGI	GGATG	6 cut(s)	136, 240, 311, 850, 1078, 1608
BseLI	CCNNNNNNNGG	5 cut(s)	568, 995, 1185, 1513, 1698
BseMI	GCAATG	3 cut(s)	727, 735, 1127
BseMII	CTCAG	4 cut(s)	140, 921, 1623, 1706
BseNI	ACTGG	4 cut(s)	141, 1042, 1268, 1605
BseRI	GAGGAG	5 cut(s)	62, 203, 434, 602, 1130
BseSI	GKGCMC	1 cut(s)	557
BseXI	GCAGC	3 cut(s)	94, 1377, 1394
BsgI	GTGCAG	1 cut(s)	1125
BshFI	GGCC	3 cut(s)	135, 555, 1506
BshNI	GGYRCC	1 cut(s)	929
BshVI	ATCGAT	1 cut(s)	92
BsiHKAI	GWGCWC	2 cut(s)	273, 1095
BsiHKCI	CYCGRG	1 cut(s)	562
BsiSI	CCGG	2 cut(s)	671, 933
BslFI	GGGAC	1 cut(s)	451
BslI	CCNNNNNNNGG	5 cut(s)	568, 995, 1185, 1513, 1698
BsmAI	GTCTC	4 cut(s)	1367, 1569, 1633, 1672
BsmBI	CGTCTC	1 cut(s)	1367
BsmFI	GGGAC	1 cut(s)	451
BsmI	GAATGC	2 cut(s)	1225, 1384
BsnI	GGCC	3 cut(s)	135, 555, 1506
Bso31I	GGTCTC	1 cut(s)	1633
BsoBI	CYCGRG	1 cut(s)	562
Bsp120I	GGGCCC	1 cut(s)	553
Bsp1286I	GDGCHC	5 cut(s)	273, 375, 557, 990, 1095
Bsp13I	TCCGGA	1 cut(s)	670
Bsp143I	GATC	4 cut(s)	58, 239, 645, 667
Bsp19I	CCATGG	1 cut(s)	1343
BspACI	CCGC	2 cut(s)	1322, 1746
BspANI	GGCC	3 cut(s)	135, 555, 1506
BspCNI	CTCAG	4 cut(s)	141, 920, 1624, 1707
BspDI	ATCGAT	1 cut(s)	92
BspEI	TCCGGA	1 cut(s)	670
BspLI	GGNNCC	3 cut(s)	555, 669, 931
BspMAI	CTGCAG	2 cut(s)	867, 1395
BspMI	ACCTGC	1 cut(s)	280
BspPI	GGATC	3 cut(s)	66, 662, 675
BspT107I	GGYRCC	1 cut(s)	929
BspTNI	GGTCTC	1 cut(s)	1633
BsrDI	GCAATG	3 cut(s)	727, 735, 1127
BsrFI	RCCGGY	1 cut(s)	932
BsrI	ACTGG	4 cut(s)	141, 1042, 1268, 1605
BssAI	RCCGGY	1 cut(s)	932
BssECI	CCNNGG	3 cut(s)	120, 1053, 1343
BssMI	GATC	4 cut(s)	58, 239, 645, 667
BssT1I	CCWWGG	1 cut(s)	1343
Bst2UI	CCWGG	1 cut(s)	1675
Bst4CI	ACNGT	5 cut(s)	597, 824, 1057, 1249, 1570
Bst6I	CTCTTC	3 cut(s)	180, 342, 1451
BstBAI	YACGTR	1 cut(s)	1259
BstC8I	GCNNGC	4 cut(s)	742, 875, 1212, 1225
BstDEI	CTNAG	6 cut(s)	149, 642, 907, 1618, 1632, 1715
BstDSI	CCRYGG	3 cut(s)	120, 1053, 1343
BstF5I	GGATG	6 cut(s)	136, 240, 311, 850, 1078, 1608
BstH2I	RGCGCY	1 cut(s)	683
BstHHI	GCGC	1 cut(s)	682
BstKTI	GATC	4 cut(s)	61, 242, 648, 670
BstMAI	GTCTC	4 cut(s)	1367, 1569, 1633, 1672
BstMBI	GATC	4 cut(s)	58, 239, 645, 667
BstMWI	GCNNNNNNNGC	6 cut(s)	169, 552, 686, 1220, 1319, 1745
BstNI	CCWGG	1 cut(s)	1675
BstNSI	RCATGY	1 cut(s)	815
BstSCI	CCNGG	1 cut(s)	1673
BstSFI	CTRYAG	3 cut(s)	114, 863, 1391
BstSLI	GKGCMC	1 cut(s)	557
BstV1I	GCAGC	3 cut(s)	94, 1377, 1394
BstX2I	RGATCY	1 cut(s)	667
BstXI	CCANNNNNNTGG	1 cut(s)	838
BstYI	RGATCY	1 cut(s)	667
Bsu15I	ATCGAT	1 cut(s)	92
BsuI	GTATCC	1 cut(s)	1271
BsuRI	GGCC	3 cut(s)	135, 555, 1506
BsuTUI	ATCGAT	1 cut(s)	92
BtgI	CCRYGG	3 cut(s)	120, 1053, 1343
BtsCI	GGATG	6 cut(s)	136, 240, 311, 850, 1078, 1608
BtsIMutI	CAGTG	4 cut(s)	148, 624, 915, 1275
BveI	ACCTGC	1 cut(s)	280
Cac8I	GCNNGC	4 cut(s)	742, 875, 1212, 1225
CaiI	CAGNNNCTG	1 cut(s)	1313
CfoI	GCGC	1 cut(s)	682
Cfr10I	RCCGGY	1 cut(s)	932
Cfr13I	GGNCC	4 cut(s)	124, 553, 554, 1664
ClaI	ATCGAT	1 cut(s)	92
Csp6I	GTAC	1 cut(s)	955
CviAII	CATG	8 cut(s)	67, 634, 812, 959, 1344, 1364, 1386, 1555
CviQI	GTAC	1 cut(s)	955
DdeI	CTNAG	6 cut(s)	149, 642, 907, 1618, 1632, 1715
DpnI	GATC	4 cut(s)	60, 241, 647, 669
DpnII	GATC	4 cut(s)	58, 239, 645, 667
DraI	TTTAAA	1 cut(s)	1729
Eam1104I	CTCTTC	3 cut(s)	180, 342, 1451
EarI	CTCTTC	3 cut(s)	180, 342, 1451
Eco130I	CCWWGG	1 cut(s)	1343
Eco147I	AGGCCT	1 cut(s)	1506
Eco24I	GRGCYC	3 cut(s)	375, 557, 990
Eco31I	GGTCTC	1 cut(s)	1633
Eco32I	GATATC	1 cut(s)	888
Eco47I	GGWCC	2 cut(s)	124, 1664
Eco57I	CTGAAG	1 cut(s)	1493
Eco88I	CYCGRG	1 cut(s)	562
EcoO109I	RGGNCCY	3 cut(s)	553, 554, 1664
EcoRI	GAATTC	4 cut(s)	251, 629, 1445, 1657
EcoRII	CCWGG	1 cut(s)	1673
EcoRV	GATATC	1 cut(s)	888
EcoT14I	CCWWGG	1 cut(s)	1343
EcoT38I	GRGCYC	3 cut(s)	375, 557, 990
ErhI	CCWWGG	1 cut(s)	1343
Esp3I	CGTCTC	1 cut(s)	1367
FaeI	CATG	8 cut(s)	70, 637, 815, 962, 1347, 1367, 1389, 1558
FalI	AAGNNNNNCTT	4 cut(s)	995, 1027, 1344, 1376
FaqI	GGGAC	1 cut(s)	451
FatI	CATG	8 cut(s)	66, 633, 811, 958, 1343, 1363, 1385, 1554
FblI	GTMKAC	1 cut(s)	196
Fnu4HI	GCNGC	4 cut(s)	83, 1383, 1391, 1746
FokI	GGATG	6 cut(s)	123, 247, 318, 857, 1085, 1595
FriOI	GRGCYC	3 cut(s)	375, 557, 990
Fsp4HI	GCNGC	4 cut(s)	83, 1383, 1391, 1746
FspBI	CTAG	1 cut(s)	1551
GlaI	GCGC	1 cut(s)	681
GluI	GCNGC	4 cut(s)	83, 1383, 1391, 1746
GsuI	CTGGAG	1 cut(s)	1696
HaeII	RGCGCY	1 cut(s)	683
HaeIII	GGCC	3 cut(s)	135, 555, 1506
HapII	CCGG	2 cut(s)	671, 933
HhaI	GCGC	1 cut(s)	682
Hin1II	CATG	8 cut(s)	70, 637, 815, 962, 1347, 1367, 1389, 1558
Hin6I	GCGC	1 cut(s)	680
HinP1I	GCGC	1 cut(s)	680
HincII	GTYRAC	1 cut(s)	1496
HindII	GTYRAC	1 cut(s)	1496
HindIII	AAGCTT	3 cut(s)	201, 963, 1212
HinfI	GANTC	8 cut(s)	11, 71, 89, 428, 445, 1421, 1558, 1636
HpaII	CCGG	2 cut(s)	671, 933
HphI	GGTGA	5 cut(s)	238, 626, 895, 1549, 1664
Hpy166II	GTNNAC	4 cut(s)	124, 197, 410, 1496
Hpy188III	TCNNGA	6 cut(s)	26, 416, 671, 731, 1640, 1662
Hpy8I	GTNNAC	4 cut(s)	124, 197, 410, 1496
Hpy99I	CGWCG	1 cut(s)	493
HpyAV	CCTTC	3 cut(s)	217, 873, 1517
HpyCH4III	ACNGT	5 cut(s)	597, 824, 1057, 1249, 1570
HpyCH4IV	ACGT	1 cut(s)	1258
HpyF10VI	GCNNNNNNNGC	6 cut(s)	169, 552, 686, 1220, 1319, 1745
HpyF3I	CTNAG	6 cut(s)	149, 642, 907, 1618, 1632, 1715
HpySE526I	ACGT	1 cut(s)	1258
Hsp92II	CATG	8 cut(s)	70, 637, 815, 962, 1347, 1367, 1389, 1558
HspAI	GCGC	1 cut(s)	680
Kpn2I	TCCGGA	1 cut(s)	670
Kzo9I	GATC	4 cut(s)	58, 239, 645, 667
LmnI	GCTCC	4 cut(s)	49, 268, 1117, 1231
Lsp1109I	GCAGC	3 cut(s)	94, 1377, 1394
LweI	GCATC	2 cut(s)	594, 1467
MaeI	CTAG	1 cut(s)	1551
MaeII	ACGT	1 cut(s)	1258
MaeIII	GTNAC	3 cut(s)	212, 1249, 1395
MalI	GATC	4 cut(s)	60, 241, 647, 669
MboI	GATC	4 cut(s)	58, 239, 645, 667
MboII	GAAGA	8 cut(s)	88, 112, 115, 197, 359, 395, 1352, 1468
MfeI	CAATTG	2 cut(s)	342, 1740
MflI	RGATCY	1 cut(s)	667
MhlI	GDGCHC	5 cut(s)	273, 375, 557, 990, 1095
MlyI	GAGTC	2 cut(s)	80, 1552
MmeI	TCCRAC	1 cut(s)	471
MroI	TCCGGA	1 cut(s)	670
MroXI	GAANNNNTTC	1 cut(s)	1134
MseI	TTAA	4 cut(s)	294, 1164, 1335, 1728
MslI	CAYNNNNRTG	2 cut(s)	141, 836
MspA1I	CMGCKG	2 cut(s)	1148, 1513
MspI	CCGG	2 cut(s)	671, 933
MspR9I	CCNGG	1 cut(s)	1675
MunI	CAATTG	2 cut(s)	342, 1740
Mva1269I	GAATGC	2 cut(s)	1225, 1384
MvaI	CCWGG	1 cut(s)	1675
MwoI	GCNNNNNNNGC	6 cut(s)	169, 552, 686, 1220, 1319, 1745
NcoI	CCATGG	1 cut(s)	1343
NdeII	GATC	4 cut(s)	58, 239, 645, 667
NlaIII	CATG	8 cut(s)	70, 637, 815, 962, 1347, 1367, 1389, 1558
NlaIV	GGNNCC	3 cut(s)	555, 669, 931
NmeAIII	GCCGAG	2 cut(s)	708, 1567
NmuCI	GTSAC	2 cut(s)	1249, 1395
NspI	RCATGY	1 cut(s)	815
PceI	AGGCCT	1 cut(s)	1506
PctI	GAATGC	2 cut(s)	1225, 1384
PdmI	GAANNNNTTC	1 cut(s)	1134
PfeI	GAWTC	6 cut(s)	11, 89, 428, 445, 1421, 1636
PkrI	GCNGC	4 cut(s)	84, 1384, 1392, 1747
PleI	GAGTC	2 cut(s)	79, 1552
PpsI	GAGTC	2 cut(s)	79, 1552
Ppu21I	YACGTR	1 cut(s)	1259
PpuMI	RGGWCCY	1 cut(s)	1664
Psp5II	RGGWCCY	1 cut(s)	1664
Psp6I	CCWGG	1 cut(s)	1673
PspGI	CCWGG	1 cut(s)	1673
PspN4I	GGNNCC	3 cut(s)	555, 669, 931
PspOMI	GGGCCC	1 cut(s)	553
PspPI	GGNCC	4 cut(s)	124, 553, 554, 1664
PspPPI	RGGWCCY	1 cut(s)	1664
PstI	CTGCAG	2 cut(s)	867, 1395
PstNI	CAGNNNCTG	1 cut(s)	1313
PsuI	RGATCY	1 cut(s)	667
PvuII	CAGCTG	2 cut(s)	1148, 1513
RsaI	GTAC	1 cut(s)	956
RsaNI	GTAC	1 cut(s)	955
RseI	CAYNNNNRTG	2 cut(s)	141, 836
SaqAI	TTAA	4 cut(s)	294, 1164, 1335, 1728
SatI	GCNGC	4 cut(s)	83, 1383, 1391, 1746
Sau3AI	GATC	4 cut(s)	58, 239, 645, 667
Sau96I	GGNCC	4 cut(s)	124, 553, 554, 1664
SchI	GAGTC	2 cut(s)	80, 1552
ScrFI	CCNGG	1 cut(s)	1675
SduI	GDGCHC	5 cut(s)	273, 375, 557, 990, 1095
SfaNI	GCATC	2 cut(s)	594, 1467
SfcI	CTRYAG	3 cut(s)	114, 863, 1391
SinI	GGWCC	2 cut(s)	124, 1664
SmiMI	CAYNNNNRTG	2 cut(s)	141, 836
SmlI	CTYRAG	3 cut(s)	217, 655, 1751
SmoI	CTYRAG	3 cut(s)	217, 655, 1751
SseBI	AGGCCT	1 cut(s)	1506
SsiI	CCGC	2 cut(s)	1322, 1746
SspMI	CTAG	1 cut(s)	1551
StuI	AGGCCT	1 cut(s)	1506
StyD4I	CCNGG	1 cut(s)	1673
StyI	CCWWGG	1 cut(s)	1343
TaaI	ACNGT	5 cut(s)	597, 824, 1057, 1249, 1570
TaiI	ACGT	1 cut(s)	1261
TaqI	TCGA	8 cut(s)	74, 87, 92, 242, 249, 255, 431, 648
TauI	GCSGC	1 cut(s)	1748
TfiI	GAWTC	6 cut(s)	11, 89, 428, 445, 1421, 1636
Tru1I	TTAA	4 cut(s)	294, 1164, 1335, 1728
Tru9I	TTAA	4 cut(s)	294, 1164, 1335, 1728
TscAI	CASTG	4 cut(s)	148, 631, 915, 1275
TseFI	GTSAC	2 cut(s)	1249, 1395
TseI	GCWGC	3 cut(s)	82, 1382, 1390
Tsp45I	GTSAC	2 cut(s)	1249, 1395
TspDTI	ATGAA	6 cut(s)	145, 527, 622, 975, 1352, 1417
TspGWI	ACGGA	1 cut(s)	1253
TspRI	CASTG	4 cut(s)	148, 631, 915, 1275
VpaK11BI	GGWCC	2 cut(s)	124, 1664
XapI	RAATTY	6 cut(s)	251, 514, 629, 781, 1445, 1657
XceI	RCATGY	1 cut(s)	815
XcmI	CCANNNNNNNNNTGG	1 cut(s)	838
XmiI	GTMKAC	1 cut(s)	196
XmnI	GAANNNNTTC	1 cut(s)	1134
XspI	CTAG	1 cut(s)	1551

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.