MD02G1019600.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
1409037 .. 1410918
1882 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1019600.v1.1.491

Sequence Viewer

Length: 1053 bp
ATGGCCATGACCAATGTCCAAGAAATGTCTATGGATGGTGAGCAGCCACCTGCGGAATATATTGTTAAAGAAAGTAGGTTTGGATCCATAGATTCTTCTCCACCATTGGCTGATGAAATCCCCATCATTGATATCAGTCTCTTCTCCCCATCATCTCCTCAATATTCTGAACAAGCAGAAAATCATGAGCTACAGAAACTCAGATCAGCACTCAGCTCGGCAGGATGCTTCCAGGCAACAGGCCATGGGATTTCGGATTCACTTCTTGACCAAGTACGTGAAGCAGCAAAACAATTCTTTGCACTTCCGGTGGAAGAGAAGGAGAAATACTCCCGAACTATTGACGGCGGCTTCGAGGGATACGGTAATGATGTCATAGTCTCCGACAAACAAGTTCTCGACTGGTCCTATCGTCTCATCCTTAAGGTCTTCCCGCAAGATCAAAGAAAGCGTCATCTTTGGCCACAAATTCCAAATGATTTTGGAGAGATGTTACATGAATATGCAACGAAGATAAAGTTGATGATGGGGTTAGTGTTTAAGGCAATGGCAAAGTCATTGAACTTGGAAGAGAAGAGCTTTGCAACGCAGCTGCTTGGAGATCAATCCCTGATGCAAGCAAGGTTCAACTTTTATCCGCCGTGCTCGAGATCTGACCTGGTCCTCGGCGTCAAGCCTCACACGGATAGGTCCGGCGTGACATGTCTCTTGCAAGACAAGGATGTGGAAGGCCTTCAAGTTTTGATAGATGGAAAATGGGTTAGAGTCCCCATTGTTCCTCATGCTATTGTTCTTAATCTTGGTGATCAAATGCAGATCATGAGCAATGGGATTTACAAGAGCCCCATGCACAGGGTGGTGACAAATGGAGAGAGCATGAGGCTATCGGTTGCCTTGTTTAATGAGCCGGATCCCGAAACGGAAATTGGTCCGGTCGAGGACTTGATCGACGAGACAAGGCCGAGGTTGTACAAAAATGTCAAGAACTATGGTTGTATCAACTACGAATGCTATCAGAGAGGGGAAATCGCACTCGAAACCGTCAAAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

351

Amino Acids

39.48

Weight (kDa)

5.1

Isoelectric Point (pI)

44.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 40 - 156 1.6e-25 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 208 - 303 9.8e-32 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 58
Acc36I ACCTGC 1 cut(s) 58
AciI CCGC 4 cut(s) 53, 348, 434, 638
AclWI GGATC 4 cut(s) 78, 91, 905, 918
AcoI YGGCCR 2 cut(s) 3, 461
AcsI RAATTY 1 cut(s) 468
AcyI GRCGYC 1 cut(s) 669
AdeI CACNNNGTG 1 cut(s) 856
AfaI GTAC 2 cut(s) 276, 971
AfiI CCNNNNNNNGG 1 cut(s) 852
AflII CTTAAG 1 cut(s) 422
AflIII ACRYGT 1 cut(s) 701
AgsI TTSAA 3 cut(s) 562, 628, 737
AjnI CCWGG 2 cut(s) 231, 657
AjuI GAANNNNNNNTTGG 4 cut(s) 63, 95, 909, 941
AluBI AGCT 4 cut(s) 190, 216, 579, 592
AluI AGCT 4 cut(s) 190, 216, 579, 592
Alw21I GWGCWC 1 cut(s) 647
Alw26I GTCTC 5 cut(s) 143, 385, 419, 710, 947
AlwI GGATC 4 cut(s) 78, 91, 905, 918
Ama87I CYCGRG 1 cut(s) 646
AoxI GGCC 5 cut(s) 3, 241, 461, 730, 959
ApeKI GCWGC 4 cut(s) 43, 284, 589, 592
ApoI RAATTY 1 cut(s) 468
ArsI GACNNNNNNTTYG 4 cut(s) 335, 367, 436, 468
Asp700I GAANNNNTTC 1 cut(s) 732
AspS9I GGNCC 4 cut(s) 405, 661, 690, 929
AsuHPI GGTGA 3 cut(s) 50, 815, 871
AvaI CYCGRG 1 cut(s) 646
AvaII GGWCC 4 cut(s) 405, 661, 690, 929
BalI TGGCCA 2 cut(s) 5, 463
BamHI GGATCC 2 cut(s) 83, 910
BanII GRGCYC 1 cut(s) 845
BarI GAAGNNNNNNTAC 2 cut(s) 311, 343
BbsI GAAGAC 1 cut(s) 421
Bbv12I GWGCWC 1 cut(s) 647
BbvI GCAGC 4 cut(s) 55, 296, 579, 601
BccI CCATC 5 cut(s) 29, 131, 157, 520, 743
BceAI ACGGC 2 cut(s) 361, 625
BcgI CGANNNNNNTGC 2 cut(s) 198, 232
BciT130I CCWGG 2 cut(s) 233, 659
BciVI GTATCC 1 cut(s) 353
BclI TGATCA 1 cut(s) 805
BcoDI GTCTC 5 cut(s) 143, 385, 419, 710, 947
BfmI CTRYAG 1 cut(s) 191
BfrI CTTAAG 1 cut(s) 422
BfuAI ACCTGC 1 cut(s) 58
BfuI GTATCC 1 cut(s) 353
BglII AGATCT 1 cut(s) 650
BisI GCNGC 5 cut(s) 44, 285, 349, 590, 593
BlsI GCNGC 5 cut(s) 45, 286, 350, 591, 594
Bme1390I CCNGG 2 cut(s) 233, 659
Bme18I GGWCC 4 cut(s) 405, 661, 690, 929
BmeT110I CYCGRG 1 cut(s) 646
BmgT120I GGNCC 4 cut(s) 405, 661, 690, 929
BmiI GGNNCC 2 cut(s) 85, 912
BmrFI CCNGG 2 cut(s) 233, 659
BmsI GCATC 2 cut(s) 215, 603
BoxI GACNNNNGTC 1 cut(s) 14
BpiI GAAGAC 1 cut(s) 421
BplI GAGNNNNNCTC 2 cut(s) 314, 346
BsaAI YACGTR 1 cut(s) 278
BsaHI GRCGYC 1 cut(s) 669
BsaJI CCNNGG 3 cut(s) 244, 664, 962
BsaWI WCCGGW 2 cut(s) 307, 931
Bsc4I CCNNNNNNNGG 1 cut(s) 852
Bse1I ACTGG 1 cut(s) 407
Bse3DI GCAATG 2 cut(s) 552, 832
BseBI CCWGG 2 cut(s) 233, 659
BseDI CCNNGG 3 cut(s) 244, 664, 962
BseGI GGATG 4 cut(s) 40, 230, 417, 727
BseLI CCNNNNNNNGG 1 cut(s) 852
BseMI GCAATG 2 cut(s) 552, 832
BseMII CTCAG 2 cut(s) 214, 226
BseNI ACTGG 1 cut(s) 407
BseRI GAGGAG 1 cut(s) 147
BseXI GCAGC 4 cut(s) 55, 296, 579, 601
Bsh1285I CGRYCG 1 cut(s) 936
BshFI GGCC 5 cut(s) 5, 243, 463, 732, 961
BsiEI CGRYCG 1 cut(s) 936
BsiHKAI GWGCWC 1 cut(s) 647
BsiHKCI CYCGRG 1 cut(s) 646
BsiSI CCGG 4 cut(s) 308, 693, 908, 932
BslFI GGGAC 1 cut(s) 752
BslI CCNNNNNNNGG 1 cut(s) 852
BsmAI GTCTC 5 cut(s) 143, 385, 419, 710, 947
BsmBI CGTCTC 1 cut(s) 419
BsmFI GGGAC 1 cut(s) 752
BsmI GAATGC 1 cut(s) 1013
BsnI GGCC 5 cut(s) 5, 243, 463, 732, 961
BsoBI CYCGRG 1 cut(s) 646
Bsp1286I GDGCHC 2 cut(s) 647, 845
Bsp1407I TGTACA 1 cut(s) 969
Bsp143I GATC 9 cut(s) 83, 203, 439, 601, 650, 805, 816, 910, 945
Bsp19I CCATGG 1 cut(s) 244
BspACI CCGC 4 cut(s) 53, 348, 434, 638
BspANI GGCC 5 cut(s) 5, 243, 463, 732, 961
BspCNI CTCAG 2 cut(s) 213, 225
BspHI TCATGA 2 cut(s) 184, 819
BspLI GGNNCC 2 cut(s) 85, 912
BspMI ACCTGC 1 cut(s) 58
BspPI GGATC 4 cut(s) 78, 91, 905, 918
BspQI GCTCTTC 1 cut(s) 569
BspTI CTTAAG 1 cut(s) 422
BsrDI GCAATG 2 cut(s) 552, 832
BsrGI TGTACA 1 cut(s) 969
BsrI ACTGG 1 cut(s) 407
BssECI CCNNGG 3 cut(s) 244, 664, 962
BssMI GATC 9 cut(s) 83, 203, 439, 601, 650, 805, 816, 910, 945
BssNI GRCGYC 1 cut(s) 669
BssT1I CCWWGG 1 cut(s) 244
Bst2UI CCWGG 2 cut(s) 233, 659
Bst4CI ACNGT 2 cut(s) 365, 1042
Bst6I CTCTTC 4 cut(s) 146, 309, 564, 569
BstACI GRCGYC 1 cut(s) 669
BstAFI CTTAAG 1 cut(s) 422
BstAUI TGTACA 1 cut(s) 969
BstBAI YACGTR 1 cut(s) 278
BstC8I GCNNGC 1 cut(s) 618
BstDEI CTNAG 2 cut(s) 200, 212
BstDSI CCRYGG 1 cut(s) 244
BstF5I GGATG 4 cut(s) 40, 230, 417, 727
BstKTI GATC 9 cut(s) 86, 206, 442, 604, 653, 808, 819, 913, 948
BstMAI GTCTC 5 cut(s) 143, 385, 419, 710, 947
BstMBI GATC 9 cut(s) 83, 203, 439, 601, 650, 805, 816, 910, 945
BstMCI CGRYCG 1 cut(s) 936
BstNI CCWGG 2 cut(s) 233, 659
BstNSI RCATGY 1 cut(s) 705
BstPAI GACNNNNGTC 1 cut(s) 14
BstSCI CCNGG 2 cut(s) 231, 657
BstSFI CTRYAG 1 cut(s) 191
BstV1I GCAGC 4 cut(s) 55, 296, 579, 601
BstV2I GAAGAC 1 cut(s) 421
BstX2I RGATCY 3 cut(s) 83, 650, 910
BstYI RGATCY 3 cut(s) 83, 650, 910
BsuI GTATCC 1 cut(s) 353
BsuRI GGCC 5 cut(s) 5, 243, 463, 732, 961
BtgI CCRYGG 1 cut(s) 244
BtsCI GGATG 4 cut(s) 40, 230, 417, 727
BveI ACCTGC 1 cut(s) 58
Cac8I GCNNGC 1 cut(s) 618
CciI TCATGA 2 cut(s) 184, 819
Cfr13I GGNCC 4 cut(s) 405, 661, 690, 929
CseI GACGC 2 cut(s) 440, 658
CsiI ACCWGGT 1 cut(s) 657
Csp6I GTAC 2 cut(s) 275, 970
CviAII CATG 9 cut(s) 7, 185, 245, 497, 702, 782, 820, 847, 877
CviQI GTAC 2 cut(s) 275, 970
DdeI CTNAG 2 cut(s) 200, 212
DpnI GATC 9 cut(s) 85, 205, 441, 603, 652, 807, 818, 912, 947
DpnII GATC 9 cut(s) 83, 203, 439, 601, 650, 805, 816, 910, 945
DraIII CACNNNGTG 1 cut(s) 856
EaeI YGGCCR 2 cut(s) 3, 461
Eam1104I CTCTTC 4 cut(s) 146, 309, 564, 569
EarI CTCTTC 4 cut(s) 146, 309, 564, 569
EciI GGCGGA 1 cut(s) 627
Eco130I CCWWGG 1 cut(s) 244
Eco147I AGGCCT 1 cut(s) 732
Eco24I GRGCYC 1 cut(s) 845
Eco32I GATATC 1 cut(s) 133
Eco47I GGWCC 4 cut(s) 405, 661, 690, 929
Eco88I CYCGRG 1 cut(s) 646
EcoRII CCWGG 2 cut(s) 231, 657
EcoRV GATATC 1 cut(s) 133
EcoT14I CCWWGG 1 cut(s) 244
EcoT38I GRGCYC 1 cut(s) 845
ErhI CCWWGG 1 cut(s) 244
Esp3I CGTCTC 1 cut(s) 419
FaeI CATG 9 cut(s) 10, 188, 248, 500, 705, 785, 823, 850, 880
FaqI GGGAC 1 cut(s) 752
FatI CATG 9 cut(s) 6, 184, 244, 496, 701, 781, 819, 846, 876
FauI CCCGC 1 cut(s) 441
FbaI TGATCA 1 cut(s) 805
Fnu4HI GCNGC 5 cut(s) 44, 285, 349, 590, 593
FokI GGATG 4 cut(s) 47, 237, 404, 734
FriOI GRGCYC 1 cut(s) 845
Fsp4HI GCNGC 5 cut(s) 44, 285, 349, 590, 593
GluI GCNGC 5 cut(s) 44, 285, 349, 590, 593
HaeIII GGCC 5 cut(s) 5, 243, 463, 732, 961
HapII CCGG 4 cut(s) 308, 693, 908, 932
HgaI GACGC 2 cut(s) 440, 658
Hin1I GRCGYC 1 cut(s) 669
Hin1II CATG 9 cut(s) 10, 188, 248, 500, 705, 785, 823, 850, 880
HinfI GANTC 3 cut(s) 92, 257, 765
HpaII CCGG 4 cut(s) 308, 693, 908, 932
HphI GGTGA 3 cut(s) 50, 815, 871
Hpy188I TCNGA 6 cut(s) 169, 203, 256, 385, 655, 1017
Hpy188III TCNNGA 8 cut(s) 185, 266, 333, 398, 648, 820, 914, 982
Hpy99I CGWCG 1 cut(s) 953
HpyAV CCTTC 3 cut(s) 313, 722, 743
HpyCH4III ACNGT 2 cut(s) 365, 1042
HpyCH4IV ACGT 1 cut(s) 277
HpyCH4V TGCA 7 cut(s) 302, 506, 584, 616, 712, 814, 850
HpyF3I CTNAG 2 cut(s) 200, 212
HpySE526I ACGT 1 cut(s) 277
Hsp92I GRCGYC 1 cut(s) 669
Hsp92II CATG 9 cut(s) 10, 188, 248, 500, 705, 785, 823, 850, 880
Ksp22I TGATCA 1 cut(s) 805
Kzo9I GATC 9 cut(s) 83, 203, 439, 601, 650, 805, 816, 910, 945
LguI GCTCTTC 1 cut(s) 569
Lsp1109I GCAGC 4 cut(s) 55, 296, 579, 601
LweI GCATC 2 cut(s) 215, 603
MabI ACCWGGT 1 cut(s) 657
MaeII ACGT 1 cut(s) 277
MaeIII GTNAC 3 cut(s) 492, 697, 859
MalI GATC 9 cut(s) 85, 205, 441, 603, 652, 807, 818, 912, 947
MboI GATC 9 cut(s) 83, 203, 439, 601, 650, 805, 816, 910, 945
MboII GAAGA 7 cut(s) 87, 133, 326, 421, 523, 581, 586
MflI RGATCY 3 cut(s) 83, 650, 910
MhlI GDGCHC 2 cut(s) 647, 845
MlsI TGGCCA 2 cut(s) 5, 463
MluCI AATT 3 cut(s) 293, 468, 924
MluNI TGGCCA 2 cut(s) 5, 463
MlyI GAGTC 1 cut(s) 774
MmeI TCCRAC 1 cut(s) 408
MnlI CCTC 9 cut(s) 168, 349, 674, 687, 789, 873, 931, 957, 1013
Mox20I TGGCCA 2 cut(s) 5, 463
MroXI GAANNNNTTC 1 cut(s) 732
MscI TGGCCA 2 cut(s) 5, 463
MseI TTAA 5 cut(s) 66, 423, 540, 795, 900
MslI CAYNNNNRTG 1 cut(s) 501
Msp20I TGGCCA 2 cut(s) 5, 463
MspA1I CMGCKG 1 cut(s) 592
MspCI CTTAAG 1 cut(s) 422
MspI CCGG 4 cut(s) 308, 693, 908, 932
MspR9I CCNGG 2 cut(s) 233, 659
Mva1269I GAATGC 1 cut(s) 1013
MvaI CCWGG 2 cut(s) 233, 659
NcoI CCATGG 1 cut(s) 244
NdeII GATC 9 cut(s) 83, 203, 439, 601, 650, 805, 816, 910, 945
NlaIII CATG 9 cut(s) 10, 188, 248, 500, 705, 785, 823, 850, 880
NlaIV GGNNCC 2 cut(s) 85, 912
NmeAIII GCCGAG 3 cut(s) 197, 645, 987
NmuCI GTSAC 2 cut(s) 697, 859
NspI RCATGY 1 cut(s) 705
PaeR7I CTCGAG 1 cut(s) 646
PagI TCATGA 2 cut(s) 184, 819
PaqCI CACCTGC 1 cut(s) 58
PceI AGGCCT 1 cut(s) 732
PciI ACATGT 1 cut(s) 701
PciSI GCTCTTC 1 cut(s) 569
PcsI WCGNNNNNNNCGW 1 cut(s) 351
PctI GAATGC 1 cut(s) 1013
PdmI GAANNNNTTC 1 cut(s) 732
PfeI GAWTC 2 cut(s) 92, 257
PflFI GACNNNGTC 1 cut(s) 659
PkrI GCNGC 5 cut(s) 45, 286, 350, 591, 594
PleI GAGTC 1 cut(s) 773
PpsI GAGTC 1 cut(s) 773
Ppu21I YACGTR 1 cut(s) 278
PscI ACATGT 1 cut(s) 701
PshAI GACNNNNGTC 1 cut(s) 14
Psp6I CCWGG 2 cut(s) 231, 657
PspGI CCWGG 2 cut(s) 231, 657
PspN4I GGNNCC 2 cut(s) 85, 912
PspPI GGNCC 4 cut(s) 405, 661, 690, 929
PsuI RGATCY 3 cut(s) 83, 650, 910
PsyI GACNNNGTC 1 cut(s) 659
PvuII CAGCTG 1 cut(s) 592
RsaI GTAC 2 cut(s) 276, 971
RsaNI GTAC 2 cut(s) 275, 970
RseI CAYNNNNRTG 1 cut(s) 501
SapI GCTCTTC 1 cut(s) 569
SaqAI TTAA 5 cut(s) 66, 423, 540, 795, 900
SatI GCNGC 5 cut(s) 44, 285, 349, 590, 593
Sau3AI GATC 9 cut(s) 83, 203, 439, 601, 650, 805, 816, 910, 945
Sau96I GGNCC 4 cut(s) 405, 661, 690, 929
SchI GAGTC 1 cut(s) 774
ScrFI CCNGG 2 cut(s) 233, 659
SduI GDGCHC 2 cut(s) 647, 845
SexAI ACCWGGT 1 cut(s) 657
SfaNI GCATC 2 cut(s) 215, 603
SfcI CTRYAG 1 cut(s) 191
Sfr274I CTCGAG 1 cut(s) 646
SinI GGWCC 4 cut(s) 405, 661, 690, 929
SlaI CTCGAG 1 cut(s) 646
SmiMI CAYNNNNRTG 1 cut(s) 501
SmlI CTYRAG 2 cut(s) 422, 646
SmoI CTYRAG 2 cut(s) 422, 646
Sse9I AATT 3 cut(s) 293, 468, 924
SseBI AGGCCT 1 cut(s) 732
SsiI CCGC 4 cut(s) 53, 348, 434, 638
SspI AATATT 1 cut(s) 164
StuI AGGCCT 1 cut(s) 732
StyD4I CCNGG 2 cut(s) 231, 657
StyI CCWWGG 1 cut(s) 244
TaaI ACNGT 2 cut(s) 365, 1042
TaiI ACGT 1 cut(s) 280
TaqI TCGA 6 cut(s) 354, 399, 647, 936, 948, 1035
TasI AATT 3 cut(s) 293, 468, 924
TatI WGTACW 1 cut(s) 969
TauI GCSGC 1 cut(s) 351
TfiI GAWTC 2 cut(s) 92, 257
Tru1I TTAA 5 cut(s) 66, 423, 540, 795, 900
Tru9I TTAA 5 cut(s) 66, 423, 540, 795, 900
TseFI GTSAC 2 cut(s) 697, 859
TseI GCWGC 4 cut(s) 43, 284, 589, 592
Tsp45I GTSAC 2 cut(s) 697, 859
TspDTI ATGAA 2 cut(s) 129, 513
TspGWI ACGGA 2 cut(s) 698, 935
Tth111I GACNNNGTC 1 cut(s) 659
Vha464I CTTAAG 1 cut(s) 422
VpaK11BI GGWCC 4 cut(s) 405, 661, 690, 929
XapI RAATTY 1 cut(s) 468
XceI RCATGY 1 cut(s) 705
XcmI CCANNNNNNNNNTGG 1 cut(s) 853
XhoI CTCGAG 1 cut(s) 646
XmnI GAANNNNTTC 1 cut(s) 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.