Rorug06G0251600

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
39714243 .. 39726675
12433 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0251600.1

Sequence Viewer

Length: 3840 bp
ATGTGGATTCTCCAAACATTTTCGAAAGATGTTTGCAGGATTGTCAACGGCCTTCTGAAAACTGCTCTAGGTCCGCCTTCTGGTTCAACAACAACATTATCTCCAGTTCAGGATATTACTTTCCGACATGAATCAGTGAAGTGCTTGGTTAACATCATTAAGTCAATGGGAGCTTGGATGGACCGACAGAGACTGGGAGACTCCTATCTGCCAAAGACCAATGAGAGTGACACTACATCAGAGAAAACAGAGAATCAATTGACCCTAAACGGTGAAGAAGGAACCGCTTTAGACAATGAAGTACATCCAGAAGGAAGTTCAGATGCTGCAACTCTCGAGCAACGTCGAGCTTTTAAACTTGAACTGCAGAAAGGTATCTCACTGTTCAATAGGAAACCTTCCAAGGGCATTGAGTTTCTGATAAGCACCAAAAAAATTGGGGGTTCTCCAGCAGATGTGGCTTCTTTCTTGAAGAACAACACTGCGGGCCTAAATGAAACCATGATCGGTGACTATTTGGGTGAAAGGGAAGAATTTTCTCTAAAAGTTATGCATGCTTATGTAGATTCCTTTAATTTCAAAGGGATGGATTTTGGTGAAGCAATTAGGTTTTTCCTGCGGGGGTTCAAGTTACCTGGAGAAGCACAGAAAATTGACCGAATCATGGAGAAGTTTGCTGAGCGTTATTGTAAATGCAGTCCGAATTCATTTACTAGTGCAGATACTGCTTATGTCCTTGCATACTCTGTGATAATGCTCAACACGGATGCCCATAATATCATGGTTAAAGATAAGATGACCAAGGCCGATTTCATACGTAACAACCGAGGAATAGATGATGGCAAGGATCTACCTGAGGAATATCTTGGTGCACTATATGATCAGATTGTTAAAAATGAAATTAAGATGAAGGCTGACTCTTCTGTACCACAGAGCAAGCAGGAAAACAGCTTTAACAAATTATTGGGCCTGGATGGTATCTTGAATCTAGTAACTGGGAAGCAGACTGAAGAAAAAGCGTTGGGTGCAAATGGGCTTCTTATAAAGGACATCCAAGAGCAATTTAAGGCGAAGTCAGGGAAATCAGAGTCTGTTTATCATTCTGTGACAGATGTGGCCATATTGAGGTTCATGGTGGAGGCCTGCTGGGGTCCTATGCTGGCCGCATTCAGTGTGACTCTGGACCAAAGTGATGACAGGCTTGCTACTGCTCAATGCTTACTGGGTTTCCGACATGCAATTCATGTTACTGCTCTGATGGGAATGCAGACCCAGAGAGATGCATTTGTCACATCAATGGCAAAGTTTACTTATCTACATAATGCTGCAGATATGAGGCAAAAGAATGTTGACGCTGTGAAGGCAATAATAGCAATCGCCGTTGAAGATGGTAATCATCTTCAGGAAGCATGGGAGCACATATTAACATGCCTTTCCCGAATTGAGCATCTGCAACTGTTGGGTGAGGGCGCACCTACTGATGCAACCTTTTTCAGCGGATCTAATGTTGAAGCGGATGACAAATCACCAAAGCCTATTGGTTTTGCTTCTCTAAAGAAAAAAGGAACTATCCAGAATCCAGCTGTGATGGCTGTTGTTCGTGGGGGTTCATATGATAGCACTAGTATTGGAATCAACACTTCGGGACTGGTATCTCCAGAACAGATTAATAATTTTATTTCGAATTTGAATTTGCTGGATCAGATTGGGAATTTTGAGTTGAACCATGTATTTGCTCATAGCCAAAGCTTGAACAGTGAAGCCATAGTTGCTTTTGTGAAGTCCTTATGTAAAGTTTCCATGTCAGAATTGCAGTCTCCAACAGATCCTCGTGTTTTCAGCCTCACAAAAATAGTTGAAATAGCGCATTATAATATGAACCGCATCAGATTAGTGTGGTCTCGAATATGGAATGTACTGTCAGATTTCTTTGTATCAGTTGGCTTGTCAGAGAATCTTTCAGTTGCAATATTTGTGATGGATTCCTTGCGTCAGCTTGCTATGAAATTCTTAGAGCGTGAGGAGCTGGCAAATTACAATTTCCAGAATGAATTTTTAAGACCATTTGTGATTGTTATGCAGAAAAGCAGCTCTACAGAAATTAGGGAATTAATAGTTCGGTGCATTTCACAAATGGTCCTCAGCCGGGTCAATAATGTGAAATCTGGCTGGAAAAGTGTTTTTATGGTTTTCACAATTGCTGCTGCTGATGAGAGGAAAAATATAGTCTTGTTGGCCTTTGAGACCATGGAAAAGATAGTCAGAGAGTATTTCCCTTACATAACTGAGACAGAGACATTGACTTTTACTGATTGTGTTAGATGCCTCTTAACCTTCACAAATAGCAGATTCAATAGTGATGTTAGCCTCAATGCTATTGCGTTTCTGCGTTTCTGTGCCGTCAAACTTGCAGAAGGAGGCCTTGTTTACAATAAGAACAGTGAGATTGATGGTTCTTCAAGTCCTAGCGCAAGTGAAGGTGCCTCAACTGTTGAGAATTTCAATGATAAAGATGATCATACATCATTTTGGGTTCCATTGCTAACAGGTTTGTCCAAACTAACATCTGATCCTAGATCAGCTATCAGGAAAGGATCCTTGGAAGTTCTTTTCAACATTCTAAAGGACCATGGTCATCTTTTCTCACACCTGTTTTGGACTGCGGTTTTCAATTCTGTTATTTTCCCCATATTTAATGGTGTCAGTGATAAGAAAGATACAGAAATGAAAAATGACCAGTCCTCGCCAATTTCGATGTCCCCACGTCCTGAAGGAAGTACATGGGATTCTGAAACTTCAGCTGTTGCGGCGGATTGCCTCATAGATCTGTTCGTCAGTTTCTTTGATGTTGTTAGGTCTCAACTACCTAGTGTGATATCCATTCTGACAGGACTCATCAGAAGTCCCATTCAGGGTCCTGCTACCGCAGGAGTTGCTGCATTAATGCGTTTGTCTAGTGAGGTGGGTAACAGGCTTTCAGAAGATGAATGGAGAGCAATTTTTCTGGCTTTAAAGGAGGCTGCCACATCTGCAGTGCCTGGATTTTTGAAGGTCTTGAGAACCATGGATAATGTCAATGTTCCTGGTCTTTCTGAATCTTTTAGTGATATCGATATGTTGTCTGATCAGGGGTACTCAAATGAGGATCTTGAGGATGATAATTTGCAAACAGCTTCATATGTGGTTTCAAGAATCAAGAGTCATGTTTCTATGCAGCTACTCATCTTACAGGTCGCTGCTGATTTGTACAAAATAAACCTAGAAACCTTGTCAGCTGCTAACATTGCAGTTCTTCTTGAAGTATATTCTCTTGTGGCATCGCACGCGCACCAACTGAACTCTGAGACAATTCTGCAGAAGAAGCTGGAAAAAGTGTGTTCCATCCTAGAACTCACTGCACCACCTATTGTTCATTTTGAGAATGAATCTTACAAAAACTATCTTAACTTCCTCCAAAACGCACTTGTGGATGATCCATCTCTTTCCAAGGAAATGGACATAGAAGCTAAACTTGTGGCAGTCTGTGAAAACATATTGCAGATATACCTAAAGTGTACTGAGCTTCATTCTTCTGAGCAGAAGCCTACTGGTCAGCCAGTTTTGCACTGGATTCTTCCTTTGGGTACAGCAAAAAAGGAGGAATTGGCTACCAGGACTTTCTTAGCCGTCTCGGCATTGCAGGCATTGAGTGGTTTGGAAAAGGTTTCATTTAGGAGGCACGTTTCTCAGTTATTTCCTTTGTTGGTAGATCTTGTGAAGAGTGAGCACACTTCGGGAGAAGTTCAACATGTTCTAAGCAACATATTCCAGTCATGTATAGGCGCAATAATAATGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1279

Amino Acids

141.93

Weight (kDa)

5.55

Isoelectric Point (pI)

38.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec7 PF01369 119 - 301 7.5e-75 Sec7 domain
Sec7-like_HDS PF09324 669 - 751 1.7e-30 Mon2/Sec7/BIG1-like, HDS
Mon2_C PF16206 841 - 907 3.4e-06 C-terminal region of Mon2 protein
BIG2_C PF20252 1071 - 1270 4.6e-27 BIG2 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1043, 1872
AccB1I GGYRCC 1 cut(s) 2480
AccII CGCG 1 cut(s) 3326
AclWI GGATC 9 cut(s) 855, 1507, 1707, 1820, 2564, 2589, 2602, 3153, 3467
AcoI YGGCCR 2 cut(s) 1116, 1161
AcsI RAATTY 8 cut(s) 533, 703, 1684, 1690, 1711, 2006, 2051, 2497
AcuI CTGAAG 4 cut(s) 1029, 1385, 2781, 2790
AfaI GTAC 8 cut(s) 303, 927, 1917, 2779, 3134, 3248, 3556, 3625
AfiI CCNNNNNNNGG 6 cut(s) 80, 404, 664, 1125, 2146, 2912
AflIII ACRYGT 1 cut(s) 3787
AhlI ACTAGT 2 cut(s) 713, 1622
AjiI CACGTC 1 cut(s) 2765
AjnI CCWGG 5 cut(s) 634, 969, 3037, 3082, 3650
AjuI GAANNNNNNNTTGG 4 cut(s) 794, 826, 2582, 2614
Alw21I GWGCWC 3 cut(s) 874, 1419, 3768
Alw44I GTGCAC 1 cut(s) 870
AlwI GGATC 9 cut(s) 855, 1507, 1707, 1820, 2564, 2589, 2602, 3153, 3467
AlwNI CAGNNNCTG 5 cut(s) 193, 326, 725, 1091, 3038
Ama87I CYCGRG 1 cut(s) 335
AoxI GGCC 9 cut(s) 49, 487, 804, 967, 1116, 1140, 1161, 2235, 2419
ApaLI GTGCAC 1 cut(s) 870
ApoI RAATTY 8 cut(s) 533, 703, 1684, 1690, 1711, 2006, 2051, 2497
AseI ATTAAT 3 cut(s) 1668, 2111, 2942
AspLEI GCGC 5 cut(s) 1472, 1867, 2471, 3328, 3824
AspS9I GGNCC 9 cut(s) 71, 181, 487, 967, 1151, 1183, 2137, 2626, 2915
AsuC2I CCSGG 1 cut(s) 2147
AsuHPI GGTGA 6 cut(s) 284, 521, 533, 608, 1475, 1518
AsuII TTCGAA 2 cut(s) 23, 1682
AvaI CYCGRG 1 cut(s) 335
AvaII GGWCC 7 cut(s) 71, 181, 1151, 1183, 2137, 2626, 2915
AxyI CCTNAGG 1 cut(s) 855
BaeGI GKGCMC 1 cut(s) 874
BalI TGGCCA 1 cut(s) 1118
BamHI GGATCC 1 cut(s) 2594
BanI GGYRCC 1 cut(s) 2480
BauI CACGAG 1 cut(s) 1830
Bbv12I GWGCWC 3 cut(s) 874, 1419, 3768
BbvCI CCTCAGC 1 cut(s) 2141
BceAI ACGGC 4 cut(s) 64, 1364, 2384, 3650
BciT130I CCWGG 5 cut(s) 636, 971, 3039, 3084, 3652
BclI TGATCA 3 cut(s) 880, 2515, 3124
BcnI CCSGG 1 cut(s) 2147
BcuI ACTAGT 2 cut(s) 713, 1622
BfmI CTRYAG 5 cut(s) 365, 1326, 2094, 3030, 3353
BglI GCCNNNNNGGC 1 cut(s) 3671
BglII AGATCT 2 cut(s) 2824, 3748
BlpI GCTNAGC 1 cut(s) 678
Bme1390I CCNGG 6 cut(s) 636, 971, 2147, 3039, 3084, 3652
Bme18I GGWCC 7 cut(s) 71, 181, 1151, 1183, 2137, 2626, 2915
BmeT110I CYCGRG 1 cut(s) 335
BmgBI CACGTC 1 cut(s) 2765
BmgT120I GGNCC 9 cut(s) 71, 181, 487, 967, 1151, 1183, 2137, 2626, 2915
BmiI GGNNCC 6 cut(s) 283, 1152, 2482, 2535, 2596, 2916
BmrFI CCNGG 6 cut(s) 636, 971, 2147, 3039, 3084, 3652
BmrI ACTGGG 3 cut(s) 203, 1005, 1232
BmsI GCATC 8 cut(s) 313, 757, 1270, 1456, 1471, 1893, 2312, 3326
BmuI ACTGGG 3 cut(s) 203, 1005, 1232
BoxI GACNNNNGTC 1 cut(s) 2631
BpmI CTGGAG 4 cut(s) 87, 432, 657, 1641
Bpu10I CCTNAGC 1 cut(s) 2141
Bpu1102I GCTNAGC 1 cut(s) 678
Bpu14I TTCGAA 2 cut(s) 23, 1682
BpuEI CTTGAG 2 cut(s) 3076, 3170
BpuMI CCSGG 1 cut(s) 2147
Bsa29I ATCGAT 1 cut(s) 3111
BsaAI YACGTR 1 cut(s) 818
BsaBI GATNNNNATC 1 cut(s) 1392
BsaI GGTCTC 3 cut(s) 1905, 2237, 2862
BsaJI CCNNGG 8 cut(s) 402, 801, 826, 2247, 2598, 2629, 3063, 3486
BsaXI ACNNNNNCTCC 4 cut(s) 85, 115, 2409, 2439
Bsc4I CCNNNNNNNGG 6 cut(s) 80, 404, 664, 1125, 2146, 2912
Bse21I CCTNAGG 1 cut(s) 855
Bse3DI GCAATG 3 cut(s) 2537, 3282, 3674
Bse8I GATNNNNATC 1 cut(s) 1392
BseBI CCWGG 5 cut(s) 636, 971, 3039, 3084, 3652
BseCI ATCGAT 1 cut(s) 3111
BseDI CCNNGG 8 cut(s) 402, 801, 826, 2247, 2598, 2629, 3063, 3486
BseJI GATNNNNATC 1 cut(s) 1392
BseLI CCNNNNNNNGG 6 cut(s) 80, 404, 664, 1125, 2146, 2912
BseMI GCAATG 3 cut(s) 2537, 3282, 3674
BseMII CTCAG 8 cut(s) 669, 846, 2155, 2277, 3333, 3549, 3564, 3740
BseRI GAGGAG 1 cut(s) 2036
BseSI GKGCMC 1 cut(s) 874
BseYI CCCAGC 1 cut(s) 1146
BsgI GTGCAG 2 cut(s) 738, 3381
Bsh1236I CGCG 1 cut(s) 3326
BshFI GGCC 9 cut(s) 51, 489, 806, 969, 1118, 1142, 1163, 2237, 2421
BshNI GGYRCC 1 cut(s) 2480
BshVI ATCGAT 1 cut(s) 3111
BsiHKAI GWGCWC 3 cut(s) 874, 1419, 3768
BsiHKCI CYCGRG 1 cut(s) 335
BsiSI CCGG 1 cut(s) 2146
BslFI GGGAC 3 cut(s) 1659, 2743, 2889
BslI CCNNNNNNNGG 6 cut(s) 80, 404, 664, 1125, 2146, 2912
BsmBI CGTCTC 1 cut(s) 3673
BsmFI GGGAC 3 cut(s) 1659, 2743, 2889
BsmI GAATGC 2 cut(s) 1166, 1269
BsnI GGCC 9 cut(s) 51, 489, 806, 969, 1118, 1142, 1163, 2237, 2421
Bso31I GGTCTC 3 cut(s) 1905, 2237, 2862
BsoBI CYCGRG 1 cut(s) 335
Bsp119I TTCGAA 2 cut(s) 23, 1682
Bsp1286I GDGCHC 3 cut(s) 874, 1419, 3768
Bsp1407I TGTACA 1 cut(s) 3246
Bsp1720I GCTNAGC 1 cut(s) 678
Bsp19I CCATGG 3 cut(s) 2247, 2629, 3063
BspANI GGCC 9 cut(s) 51, 489, 806, 969, 1118, 1142, 1163, 2237, 2421
BspCNI CTCAG 8 cut(s) 670, 847, 2154, 2278, 3334, 3550, 3565, 3739
BspDI ATCGAT 1 cut(s) 3111
BspFNI CGCG 1 cut(s) 3326
BspLI GGNNCC 6 cut(s) 283, 1152, 2482, 2535, 2596, 2916
BspMAI CTGCAG 4 cut(s) 369, 1330, 3034, 3357
BspPI GGATC 9 cut(s) 855, 1507, 1707, 1820, 2564, 2589, 2602, 3153, 3467
BspT104I TTCGAA 2 cut(s) 23, 1682
BspT107I GGYRCC 1 cut(s) 2480
BspTNI GGTCTC 3 cut(s) 1905, 2237, 2862
BsrDI GCAATG 3 cut(s) 2537, 3282, 3674
BsrGI TGTACA 1 cut(s) 3246
BssECI CCNNGG 8 cut(s) 402, 801, 826, 2247, 2598, 2629, 3063, 3486
BssSI CACGAG 1 cut(s) 1830
BssT1I CCWWGG 7 cut(s) 402, 801, 2247, 2598, 2629, 3063, 3486
Bst2BI CACGAG 1 cut(s) 1830
Bst2UI CCWGG 5 cut(s) 636, 971, 3039, 3084, 3652
Bst4CI ACNGT 7 cut(s) 272, 384, 1458, 1757, 1920, 2441, 2491
Bst6I CTCTTC 2 cut(s) 925, 3752
BstAPI GCANNNNNTGC 2 cut(s) 725, 2933
BstAUI TGTACA 1 cut(s) 3246
BstBAI YACGTR 1 cut(s) 818
BstBI TTCGAA 2 cut(s) 23, 1682
BstDSI CCRYGG 3 cut(s) 2247, 2629, 3063
BstFNI CGCG 1 cut(s) 3326
BstHHI GCGC 5 cut(s) 1472, 1867, 2471, 3328, 3824
BstNI CCWGG 5 cut(s) 636, 971, 3039, 3084, 3652
BstNSI RCATGY 4 cut(s) 557, 1238, 1431, 3791
BstPAI GACNNNNGTC 1 cut(s) 2631
BstSCI CCNGG 6 cut(s) 634, 969, 2145, 3037, 3082, 3650
BstSFI CTRYAG 5 cut(s) 365, 1326, 2094, 3030, 3353
BstSLI GKGCMC 1 cut(s) 874
BstSNI TACGTA 1 cut(s) 818
BstUI CGCG 1 cut(s) 3326
BstX2I RGATCY 7 cut(s) 847, 1499, 1825, 2594, 2824, 3145, 3748
BstXI CCANNNNNNTGG 1 cut(s) 3493
BstYI RGATCY 7 cut(s) 847, 1499, 1825, 2594, 2824, 3145, 3748
Bsu15I ATCGAT 1 cut(s) 3111
Bsu36I CCTNAGG 1 cut(s) 855
BsuRI GGCC 9 cut(s) 51, 489, 806, 969, 1118, 1142, 1163, 2237, 2421
BsuTUI ATCGAT 1 cut(s) 3111
BtgI CCRYGG 3 cut(s) 2247, 2629, 3063
BtgZI GCGATG 1 cut(s) 3303
BtrI CACGTC 1 cut(s) 2765
BtsI GCAGTG 3 cut(s) 480, 3039, 3393
CaiI CAGNNNCTG 5 cut(s) 193, 326, 725, 1091, 3038
CfoI GCGC 5 cut(s) 1472, 1867, 2471, 3328, 3824
Cfr13I GGNCC 9 cut(s) 71, 181, 487, 967, 1151, 1183, 2137, 2626, 2915
ClaI ATCGAT 1 cut(s) 3111
CseI GACGC 2 cut(s) 1361, 1979
Csp6I GTAC 8 cut(s) 302, 926, 1916, 2778, 3133, 3247, 3555, 3624
CviQI GTAC 8 cut(s) 302, 926, 1916, 2778, 3133, 3247, 3555, 3624
DraI TTTAAA 2 cut(s) 355, 3012
EaeI YGGCCR 2 cut(s) 1116, 1161
Eam1104I CTCTTC 2 cut(s) 925, 3752
EarI CTCTTC 2 cut(s) 925, 3752
EciI GGCGGA 2 cut(s) 63, 2825
Eco105I TACGTA 1 cut(s) 818
Eco130I CCWWGG 7 cut(s) 402, 801, 2247, 2598, 2629, 3063, 3486
Eco147I AGGCCT 2 cut(s) 1142, 2421
Eco31I GGTCTC 3 cut(s) 1905, 2237, 2862
Eco32I GATATC 2 cut(s) 2877, 3109
Eco47I GGWCC 7 cut(s) 71, 181, 1151, 1183, 2137, 2626, 2915
Eco57I CTGAAG 4 cut(s) 1029, 1385, 2781, 2790
Eco81I CCTNAGG 1 cut(s) 855
Eco88I CYCGRG 1 cut(s) 335
EcoO109I RGGNCCY 2 cut(s) 1151, 2915
EcoRI GAATTC 1 cut(s) 703
EcoRII CCWGG 5 cut(s) 634, 969, 3037, 3082, 3650
EcoRV GATATC 2 cut(s) 2877, 3109
EcoT14I CCWWGG 7 cut(s) 402, 801, 2247, 2598, 2629, 3063, 3486
EcoT22I ATGCAT 2 cut(s) 555, 1285
ErhI CCWWGG 7 cut(s) 402, 801, 2247, 2598, 2629, 3063, 3486
Esp3I CGTCTC 1 cut(s) 3673
FalI AAGNNNNNCTT 4 cut(s) 2406, 2438, 3495, 3527
FaqI GGGAC 3 cut(s) 1659, 2743, 2889
FauI CCCGC 2 cut(s) 478, 612
FauNDI CATATG 2 cut(s) 1612, 3178
FbaI TGATCA 3 cut(s) 880, 2515, 3124
GlaI GCGC 5 cut(s) 1471, 1866, 2470, 3327, 3823
GsaI CCCAGC 1 cut(s) 1150
GsuI CTGGAG 4 cut(s) 87, 432, 657, 1641
HaeIII GGCC 9 cut(s) 51, 489, 806, 969, 1118, 1142, 1163, 2237, 2421
HapII CCGG 1 cut(s) 2146
HgaI GACGC 2 cut(s) 1361, 1979
HhaI GCGC 5 cut(s) 1472, 1867, 2471, 3328, 3824
Hin6I GCGC 5 cut(s) 1470, 1865, 2469, 3326, 3822
HinP1I GCGC 5 cut(s) 1470, 1865, 2469, 3326, 3822
HincII GTYRAC 3 cut(s) 46, 151, 1351
HindII GTYRAC 3 cut(s) 46, 151, 1351
HindIII AAGCTT 1 cut(s) 1747
HpaI GTTAAC 1 cut(s) 151
HpaII CCGG 1 cut(s) 2146
HphI GGTGA 6 cut(s) 284, 521, 533, 608, 1475, 1518
Hpy166II GTNNAC 7 cut(s) 46, 151, 872, 1308, 1351, 2428, 3555
Hpy8I GTNNAC 7 cut(s) 46, 151, 872, 1308, 1351, 2428, 3555
Hpy99I CGWCG 1 cut(s) 348
HpyCH4III ACNGT 7 cut(s) 272, 384, 1458, 1757, 1920, 2441, 2491
HpyCH4IV ACGT 4 cut(s) 343, 817, 2764, 3720
HpySE526I ACGT 4 cut(s) 343, 817, 2764, 3720
HspAI GCGC 5 cut(s) 1470, 1865, 2469, 3326, 3822
Ksp22I TGATCA 3 cut(s) 880, 2515, 3124
KspAI GTTAAC 1 cut(s) 151
LmnI GCTCC 3 cut(s) 170, 1414, 2023
LweI GCATC 8 cut(s) 313, 757, 1270, 1456, 1471, 1893, 2312, 3326
MaeII ACGT 4 cut(s) 343, 817, 2764, 3720
MfeI CAATTG 2 cut(s) 257, 2196
MflI RGATCY 7 cut(s) 847, 1499, 1825, 2594, 2824, 3145, 3748
MhlI GDGCHC 3 cut(s) 874, 1419, 3768
MlsI TGGCCA 1 cut(s) 1118
MluNI TGGCCA 1 cut(s) 1118
MlyI GAGTC 6 cut(s) 194, 911, 1097, 1171, 2886, 3208
MmeI TCCRAC 3 cut(s) 148, 1255, 1844
Mox20I TGGCCA 1 cut(s) 1118
Mph1103I ATGCAT 2 cut(s) 555, 1285
MscI TGGCCA 1 cut(s) 1118
MslI CAYNNNNRTG 2 cut(s) 558, 1295
Msp20I TGGCCA 1 cut(s) 1118
MspA1I CMGCKG 4 cut(s) 1497, 1583, 2801, 3275
MspI CCGG 1 cut(s) 2146
MspR9I CCNGG 6 cut(s) 636, 971, 2147, 3039, 3084, 3652
MunI CAATTG 2 cut(s) 257, 2196
Mva1269I GAATGC 2 cut(s) 1166, 1269
MvaI CCWGG 5 cut(s) 636, 971, 3039, 3084, 3652
MvnI CGCG 1 cut(s) 3326
NciI CCSGG 1 cut(s) 2147
NcoI CCATGG 3 cut(s) 2247, 2629, 3063
NdeI CATATG 2 cut(s) 1612, 3178
NlaIV GGNNCC 6 cut(s) 283, 1152, 2482, 2535, 2596, 2916
NmeAIII GCCGAG 1 cut(s) 3650
NmuCI GTSAC 5 cut(s) 227, 509, 1105, 1174, 1288
NsiI ATGCAT 2 cut(s) 555, 1285
NspI RCATGY 4 cut(s) 557, 1238, 1431, 3791
NspV TTCGAA 2 cut(s) 23, 1682
PaeI GCATGC 1 cut(s) 557
PaeR7I CTCGAG 1 cut(s) 335
PceI AGGCCT 2 cut(s) 1142, 2421
PciI ACATGT 1 cut(s) 3787
PcsI WCGNNNNNNNCGW 2 cut(s) 823, 2750
PctI GAATGC 2 cut(s) 1166, 1269
PleI GAGTC 6 cut(s) 194, 911, 1096, 1171, 2886, 3207
PpsI GAGTC 6 cut(s) 194, 911, 1096, 1171, 2886, 3207
Ppu21I YACGTR 1 cut(s) 818
PpuMI RGGWCCY 2 cut(s) 1151, 2915
PscI ACATGT 1 cut(s) 3787
PshAI GACNNNNGTC 1 cut(s) 2631
PshBI ATTAAT 3 cut(s) 1668, 2111, 2942
PsiI TTATAA 2 cut(s) 1043, 1872
Psp5II RGGWCCY 2 cut(s) 1151, 2915
Psp6I CCWGG 5 cut(s) 634, 969, 3037, 3082, 3650
PspFI CCCAGC 1 cut(s) 1146
PspGI CCWGG 5 cut(s) 634, 969, 3037, 3082, 3650
PspN4I GGNNCC 6 cut(s) 283, 1152, 2482, 2535, 2596, 2916
PspPI GGNCC 9 cut(s) 71, 181, 487, 967, 1151, 1183, 2137, 2626, 2915
PspPPI RGGWCCY 2 cut(s) 1151, 2915
PstI CTGCAG 4 cut(s) 369, 1330, 3034, 3357
PstNI CAGNNNCTG 5 cut(s) 193, 326, 725, 1091, 3038
PsuI RGATCY 7 cut(s) 847, 1499, 1825, 2594, 2824, 3145, 3748
PvuII CAGCTG 3 cut(s) 1583, 2801, 3275
RsaI GTAC 8 cut(s) 303, 927, 1917, 2779, 3134, 3248, 3556, 3625
RsaNI GTAC 8 cut(s) 302, 926, 1916, 2778, 3133, 3247, 3555, 3624
RseI CAYNNNNRTG 2 cut(s) 558, 1295
Sau96I GGNCC 9 cut(s) 71, 181, 487, 967, 1151, 1183, 2137, 2626, 2915
SchI GAGTC 6 cut(s) 194, 911, 1097, 1171, 2886, 3208
ScrFI CCNGG 6 cut(s) 636, 971, 2147, 3039, 3084, 3652
SduI GDGCHC 3 cut(s) 874, 1419, 3768
SfaNI GCATC 8 cut(s) 313, 757, 1270, 1456, 1471, 1893, 2312, 3326
SfcI CTRYAG 5 cut(s) 365, 1326, 2094, 3030, 3353
Sfr274I CTCGAG 1 cut(s) 335
SfuI TTCGAA 2 cut(s) 23, 1682
SinI GGWCC 7 cut(s) 71, 181, 1151, 1183, 2137, 2626, 2915
SlaI CTCGAG 1 cut(s) 335
SmiMI CAYNNNNRTG 2 cut(s) 558, 1295
SmlI CTYRAG 3 cut(s) 335, 3055, 3149
SmoI CTYRAG 3 cut(s) 335, 3055, 3149
SnaBI TACGTA 1 cut(s) 818
SpeI ACTAGT 2 cut(s) 713, 1622
SphI GCATGC 1 cut(s) 557
SseBI AGGCCT 2 cut(s) 1142, 2421
SspI AATATT 1 cut(s) 1971
StuI AGGCCT 2 cut(s) 1142, 2421
StyD4I CCNGG 6 cut(s) 634, 969, 2145, 3037, 3082, 3650
StyI CCWWGG 7 cut(s) 402, 801, 2247, 2598, 2629, 3063, 3486
TaaI ACNGT 7 cut(s) 272, 384, 1458, 1757, 1920, 2441, 2491
TaiI ACGT 4 cut(s) 346, 820, 2767, 3723
TaqI TCGA 7 cut(s) 23, 336, 346, 1682, 1903, 2753, 3111
TaqII GACCGA 2 cut(s) 198, 672
TatI WGTACW 5 cut(s) 301, 1915, 2777, 3246, 3554
TauI GCSGC 2 cut(s) 1166, 2810
TseFI GTSAC 5 cut(s) 227, 509, 1105, 1174, 1288
Tsp45I GTSAC 5 cut(s) 227, 509, 1105, 1174, 1288
TspGWI ACGGA 1 cut(s) 779
VneI GTGCAC 1 cut(s) 870
VpaK11BI GGWCC 7 cut(s) 71, 181, 1151, 1183, 2137, 2626, 2915
VspI ATTAAT 3 cut(s) 1668, 2111, 2942
XapI RAATTY 8 cut(s) 533, 703, 1684, 1690, 1711, 2006, 2051, 2497
XceI RCATGY 4 cut(s) 557, 1238, 1431, 3791
XcmI CCANNNNNNNNNTGG 1 cut(s) 3603
XhoI CTCGAG 1 cut(s) 335
Zsp2I ATGCAT 2 cut(s) 555, 1285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.