Rh2AG027000

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
1888849 .. 1889268
420 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG027000.1

Sequence Viewer

Length: 228 bp
ATGGAGCTCCGCGTCTACTACTCTAATAAAGATACAACATCACCAATAGTCCGCTCTGAAGATGTGCGTGAAGCTGCAATACAAATCATACAATTCTTTGAACTTCCAGTGGTAGAGAAGCAAAAATACTCCAGAGAAATTTATGCTGGCCGTGAAGGATATGGGGATGATGTCATTATCTCAGAGAAGCAAGTTCTGGATTGGTCCTACCGCCTGATTCTTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

8.89

Weight (kDa)

4.85

Isoelectric Point (pI)

52.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 54
AccI GTMKAC 1 cut(s) 15
AccII CGCG 1 cut(s) 12
AciI CCGC 3 cut(s) 10, 52, 211
AcoI YGGCCR 1 cut(s) 148
AcsI RAATTY 1 cut(s) 138
AcuI CTGAAG 1 cut(s) 78
AgsI TTSAA 2 cut(s) 101, 224
AluBI AGCT 2 cut(s) 7, 74
AluI AGCT 2 cut(s) 7, 74
Alw21I GWGCWC 1 cut(s) 9
AoxI GGCC 1 cut(s) 148
ApeKI GCWGC 1 cut(s) 74
ApoI RAATTY 1 cut(s) 138
AspS9I GGNCC 1 cut(s) 204
AsuHPI GGTGA 1 cut(s) 33
AvaII GGWCC 1 cut(s) 204
BanII GRGCYC 1 cut(s) 9
BarI GAAGNNNNNNTAC 4 cut(s) 63, 95, 110, 142
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 1 cut(s) 61
BceAI ACGGC 1 cut(s) 135
BisI GCNGC 1 cut(s) 75
BlsI GCNGC 1 cut(s) 76
Bme18I GGWCC 1 cut(s) 204
BmgT120I GGNCC 1 cut(s) 204
BpmI CTGGAG 1 cut(s) 115
Bse1I ACTGG 1 cut(s) 107
BseGI GGATG 1 cut(s) 172
BseMII CTCAG 1 cut(s) 195
BseNI ACTGG 1 cut(s) 107
BseXI GCAGC 1 cut(s) 61
Bsh1236I CGCG 1 cut(s) 12
BshFI GGCC 1 cut(s) 150
BsiHKAI GWGCWC 1 cut(s) 9
BsnI GGCC 1 cut(s) 150
Bsp1286I GDGCHC 1 cut(s) 9
BspACI CCGC 3 cut(s) 10, 52, 211
BspANI GGCC 1 cut(s) 150
BspCNI CTCAG 1 cut(s) 194
BspFNI CGCG 1 cut(s) 12
BsrBI CCGCTC 1 cut(s) 54
BsrI ACTGG 1 cut(s) 107
BstC8I GCNNGC 1 cut(s) 148
BstDEI CTNAG 1 cut(s) 181
BstF5I GGATG 1 cut(s) 172
BstFNI CGCG 1 cut(s) 12
BstUI CGCG 1 cut(s) 12
BstV1I GCAGC 1 cut(s) 61
BsuRI GGCC 1 cut(s) 150
BtsCI GGATG 1 cut(s) 172
BtsIMutI CAGTG 1 cut(s) 114
Cac8I GCNNGC 1 cut(s) 148
Cfr13I GGNCC 1 cut(s) 204
CviJI RGCY 3 cut(s) 7, 74, 150
CviKI_1 RGCY 3 cut(s) 7, 74, 150
DdeI CTNAG 1 cut(s) 181
EaeI YGGCCR 1 cut(s) 148
Ecl136II GAGCTC 1 cut(s) 7
Eco24I GRGCYC 1 cut(s) 9
Eco47I GGWCC 1 cut(s) 204
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 78
EcoICRI GAGCTC 1 cut(s) 7
EcoT38I GRGCYC 1 cut(s) 9
FaiI YATR 3 cut(s) 89, 144, 162
FblI GTMKAC 1 cut(s) 15
Fnu4HI GCNGC 1 cut(s) 75
FokI GGATG 1 cut(s) 179
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 1 cut(s) 75
GluI GCNGC 1 cut(s) 75
GsuI CTGGAG 1 cut(s) 115
HaeIII GGCC 1 cut(s) 150
HinfI GANTC 1 cut(s) 217
HphI GGTGA 1 cut(s) 33
Hpy166II GTNNAC 1 cut(s) 16
Hpy188I TCNGA 2 cut(s) 58, 184
Hpy188III TCNNGA 2 cut(s) 132, 197
Hpy8I GTNNAC 1 cut(s) 16
HpyAV CCTTC 1 cut(s) 149
HpyCH4V TGCA 1 cut(s) 77
HpyF3I CTNAG 1 cut(s) 181
LmnI GCTCC 2 cut(s) 4, 12
LpnPI CCDG 4 cut(s) 120, 132, 145, 182
Lsp1109I GCAGC 1 cut(s) 61
MbiI CCGCTC 1 cut(s) 54
MboII GAAGA 2 cut(s) 71, 212
MhlI GDGCHC 1 cut(s) 9
MluCI AATT 2 cut(s) 92, 138
MvnI CGCG 1 cut(s) 12
PfeI GAWTC 1 cut(s) 217
PkrI GCNGC 1 cut(s) 76
Psp124BI GAGCTC 1 cut(s) 9
PspPI GGNCC 1 cut(s) 204
SacI GAGCTC 1 cut(s) 9
SatI GCNGC 1 cut(s) 75
Sau96I GGNCC 1 cut(s) 204
SduI GDGCHC 1 cut(s) 9
SetI ASST 2 cut(s) 9, 76
SgeI CNNG 8 cut(s) 23, 80, 119, 144, 159, 164, 203, 209
SinI GGWCC 1 cut(s) 204
Sse9I AATT 2 cut(s) 92, 138
SsiI CCGC 3 cut(s) 10, 52, 211
SstI GAGCTC 1 cut(s) 9
TasI AATT 2 cut(s) 92, 138
TfiI GAWTC 1 cut(s) 217
TscAI CASTG 1 cut(s) 114
TseI GCWGC 1 cut(s) 74
TspRI CASTG 1 cut(s) 114
VpaK11BI GGWCC 1 cut(s) 204
XapI RAATTY 1 cut(s) 138
XmiI GTMKAC 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.