Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002033

Physical Location & Seq

Genomic Coordinates Reverse (-)

21268332 .. 21270224

Gene Structure 1893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G251800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1056 bp

ATGGCCGCCATGAGTGTCCAAGAAATGTCCATCAATGGTGATCAACCACCGCCTGAATATATTGTCAAAGAAAGCAGTTTTGGATGTATAGAGTCTTCCCCACCATTAGCTGATCAAATTCCCATCATTGATATCAGTCTCTTCTCACCATCATCACTTGAATATTCTGAACAAGCAGAGAATCATGAGCTACAGAAACTTAGAACAGCTCTCAGCTCAGCAGGATGCTTCCAGGCAATCGGTCATGGGATATCAGATTCATTTCTTGACAAGGTACGTGAAGCTGCAAAACAATTCTTTGCACTTCCAGTTGAAGAGAAGCAAAAATACTCCCGAGCACTCGATGGCGGCTCCGAAGGATATGGGAATGATGTCATAGTGTCGGAGAAGCAAGTTCTCGATTGGTCCTACCGTCTCACTCTCAGAGTCTTCCCACAAGACCAAAGAAGACTTCATCTTTGGCCACAAAATCCAAATGATTTTGGAGAGATGTTACATGAATATGCAACGAAGATAAAGTTGATGATGGGGGTCGTGTTCAAGGCCATGGCAAAGTCGTTGGATTTGGAAGAGGATAGCTTTGCAAAGCAGCTGTTTGGAGACCAATCCCTGCTGCAAGCAAGATTCAACTTCTATCCACCGTGCTCGAGATCCGATCTGGTTCTCGGTGTCAAGCCTCATACAGATAGGTCTGGCATGACAGTTCTCTTGCAAGACAAAGATGTGGAAGGTCTTCAAGTTTTGATAGATGGTAAATGGGTTAGAGTCCCCATTGTTCCTCATGCTCTTGTTCTTAACCTTGGTGATCAGATGCAGATTATGAGTAATGGTATATACAAGAGCCCAATGCACAGGGTGGTGACAAATACAGAGAAGATGAGATTGTCTGTTGCTTTGTTTAATGAACCAGATCCTGAAACTGAGATTGGTCCTGTGGAACACTTGATAGACGACGAAACAAGGCCAAGGTTATACAAAAGTGTCAAGAATTATGGTCGTATCAACTATGAATGCTATCAGAGAGGGGAGATTGCACTTGAAACAGTCAAAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

352

Amino Acids

39.67

Weight (kDa)

5.23

Isoelectric Point (pI)

50.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002033)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02111 FvH4_1g02112 FvH4_1g02120
malus_domestica	MD02G1019300.v1.1 MD02G1019600.v1.1
prunus_persica	Prupe.7G251800_v2.0.a1 Prupe.7G251800_v2.0.a1
pyrus_communis	pycom02g01720 pycom02g01730 pycom02g01740
rosa_chinensis	RchiOBHm_Chr2g0087171 RchiOBHm_Chr2g0087181 RchiOBHm_Chr2g0087191 RchiOBHm_Chr2g0087251 RchiOBHm_Chr6g0295511
rosa_laevigata	RLG00000011795 RLG00000015839 RLG00000015840 RLG00000015841 RLG00000015843 RLG00000015847
rosa_multiflora	Rmu_co8200202.1_g000001 Rmu_sc0003367.1_g000007 Rmu_sc0009355.1_g000005 Rmu_sc0009802.1_g000001 Rmu_sc0011562.1_g000001 Rmu_sc0018794.1_g000006 Rmu_ssc0000239.1_g000011
rosa_roxburghii	Rroxscaffold_2G00153820 Rroxscaffold_7G00172410
rosa_rugosa	Rorug01G0473200 Rorug01G0473600 Rorug06G0251600
rosa_samantha	Rh2AG026300 Rh2AG026500 Rh2AG027000 Rh2CG026800 Rh2CG026900 Rh2CG027000 Rh2CG027400 Rh2DG026600 Rh6BG373100 Rh6CG379300 Rh6DG365800
rosa_wichuraiana	Rw2G002110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	6, 50, 348
AclWI	GGATC	2 cut(s)	645, 905
AcoI	YGGCCR	2 cut(s)	3, 461
AcsI	RAATTY	1 cut(s)	117
AdeI	CACNNNGTG	1 cut(s)	856
AfaI	GTAC	1 cut(s)	276
AgsI	TTSAA	6 cut(s)	161, 314, 541, 628, 737, 1040
AjnI	CCWGG	1 cut(s)	231
AjuI	GAANNNNNNNTTGG	6 cut(s)	63, 95, 435, 467, 909, 941
AluBI	AGCT	7 cut(s)	110, 190, 209, 216, 284, 579, 592
AluI	AGCT	7 cut(s)	110, 190, 209, 216, 284, 579, 592
Alw21I	GWGCWC	2 cut(s)	340, 647
Alw26I	GTCTC	3 cut(s)	143, 419, 594
AlwI	GGATC	2 cut(s)	645, 905
AlwNI	CAGNNNCTG	1 cut(s)	914
Ama87I	CYCGRG	2 cut(s)	333, 646
AoxI	GGCC	4 cut(s)	3, 461, 543, 962
ApeKI	GCWGC	3 cut(s)	284, 589, 613
ApoI	RAATTY	1 cut(s)	117
ArsI	GACNNNNNNTTYG	2 cut(s)	441, 473
Asp700I	GAANNNNTTC	1 cut(s)	732
AspS9I	GGNCC	2 cut(s)	405, 929
AsuHPI	GGTGA	4 cut(s)	50, 138, 815, 871
AvaI	CYCGRG	2 cut(s)	333, 646
AvaII	GGWCC	2 cut(s)	405, 929
BalI	TGGCCA	1 cut(s)	463
BanII	GRGCYC	1 cut(s)	845
BarI	GAAGNNNNNNTAC	4 cut(s)	79, 111, 311, 343
BbsI	GAAGAC	4 cut(s)	87, 421, 454, 725
Bbv12I	GWGCWC	2 cut(s)	340, 647
BbvI	GCAGC	3 cut(s)	271, 600, 601
BccI	CCATC	6 cut(s)	38, 131, 157, 338, 520, 743
BciT130I	CCWGG	1 cut(s)	233
BclI	TGATCA	3 cut(s)	40, 112, 805
BcoDI	GTCTC	3 cut(s)	143, 419, 594
BfmI	CTRYAG	1 cut(s)	191
BisI	GCNGC	5 cut(s)	6, 285, 349, 590, 614
BlpI	GCTNAGC	1 cut(s)	217
BlsI	GCNGC	5 cut(s)	7, 286, 350, 591, 615
Bme1390I	CCNGG	1 cut(s)	233
Bme18I	GGWCC	2 cut(s)	405, 929
BmeT110I	CYCGRG	2 cut(s)	333, 646
BmgT120I	GGNCC	2 cut(s)	405, 929
BmiI	GGNNCC	1 cut(s)	352
BmrFI	CCNGG	1 cut(s)	233
BmsI	GCATC	2 cut(s)	215, 801
BpiI	GAAGAC	4 cut(s)	87, 421, 454, 725
Bpu1102I	GCTNAGC	1 cut(s)	217
BsaAI	YACGTR	1 cut(s)	278
BsaI	GGTCTC	1 cut(s)	594
BsaJI	CCNNGG	3 cut(s)	546, 799, 965
Bse1I	ACTGG	1 cut(s)	308
BseBI	CCWGG	1 cut(s)	233
BseDI	CCNNGG	3 cut(s)	546, 799, 965
BseGI	GGATG	2 cut(s)	89, 230
BseMII	CTCAG	4 cut(s)	226, 231, 436, 912
BseNI	ACTGG	1 cut(s)	308
BseXI	GCAGC	3 cut(s)	271, 600, 601
BshFI	GGCC	4 cut(s)	5, 463, 545, 964
BsiHKAI	GWGCWC	2 cut(s)	340, 647
BsiHKCI	CYCGRG	2 cut(s)	333, 646
BslFI	GGGAC	1 cut(s)	752
BsmAI	GTCTC	3 cut(s)	143, 419, 594
BsmBI	CGTCTC	1 cut(s)	419
BsmFI	GGGAC	1 cut(s)	752
BsmI	GAATGC	1 cut(s)	1016
BsnI	GGCC	4 cut(s)	5, 463, 545, 964
Bso31I	GGTCTC	1 cut(s)	594
BsoBI	CYCGRG	2 cut(s)	333, 646
Bsp1286I	GDGCHC	3 cut(s)	340, 647, 845
Bsp143I	GATC	6 cut(s)	40, 112, 650, 655, 805, 910
Bsp1720I	GCTNAGC	1 cut(s)	217
Bsp19I	CCATGG	1 cut(s)	546
BspACI	CCGC	3 cut(s)	6, 50, 348
BspANI	GGCC	4 cut(s)	5, 463, 545, 964
BspCNI	CTCAG	4 cut(s)	225, 230, 435, 913
BspHI	TCATGA	1 cut(s)	184
BspLI	GGNNCC	1 cut(s)	352
BspPI	GGATC	2 cut(s)	645, 905
BspTNI	GGTCTC	1 cut(s)	594
BsrI	ACTGG	1 cut(s)	308
BssECI	CCNNGG	3 cut(s)	546, 799, 965
BssMI	GATC	6 cut(s)	40, 112, 650, 655, 805, 910
BssT1I	CCWWGG	3 cut(s)	546, 799, 965
Bst2UI	CCWGG	1 cut(s)	233
Bst4CI	ACNGT	4 cut(s)	413, 642, 703, 1045
Bst6I	CTCTTC	3 cut(s)	146, 309, 564
BstBAI	YACGTR	1 cut(s)	278
BstC8I	GCNNGC	1 cut(s)	618
BstDEI	CTNAG	5 cut(s)	200, 212, 217, 422, 921
BstDSI	CCRYGG	1 cut(s)	546
BstF5I	GGATG	2 cut(s)	89, 230
BstKTI	GATC	6 cut(s)	43, 115, 653, 658, 808, 913
BstMAI	GTCTC	3 cut(s)	143, 419, 594
BstMBI	GATC	6 cut(s)	40, 112, 650, 655, 805, 910
BstNI	CCWGG	1 cut(s)	233
BstSCI	CCNGG	1 cut(s)	231
BstSFI	CTRYAG	1 cut(s)	191
BstV1I	GCAGC	3 cut(s)	271, 600, 601
BstV2I	GAAGAC	4 cut(s)	87, 421, 454, 725
BstX2I	RGATCY	2 cut(s)	650, 910
BstYI	RGATCY	2 cut(s)	650, 910
BsuRI	GGCC	4 cut(s)	5, 463, 545, 964
BtgI	CCRYGG	1 cut(s)	546
BtsCI	GGATG	2 cut(s)	89, 230
Cac8I	GCNNGC	1 cut(s)	618
CaiI	CAGNNNCTG	1 cut(s)	914
CciI	TCATGA	1 cut(s)	184
Cfr13I	GGNCC	2 cut(s)	405, 929
Csp6I	GTAC	1 cut(s)	275
CviAII	CATG	7 cut(s)	10, 185, 245, 497, 547, 697, 782
CviQI	GTAC	1 cut(s)	275
DdeI	CTNAG	5 cut(s)	200, 212, 217, 422, 921
DpnI	GATC	6 cut(s)	42, 114, 652, 657, 807, 912
DpnII	GATC	6 cut(s)	40, 112, 650, 655, 805, 910
DraIII	CACNNNGTG	1 cut(s)	856
EaeI	YGGCCR	2 cut(s)	3, 461
Eam1104I	CTCTTC	3 cut(s)	146, 309, 564
EarI	CTCTTC	3 cut(s)	146, 309, 564
Eco130I	CCWWGG	3 cut(s)	546, 799, 965
Eco24I	GRGCYC	1 cut(s)	845
Eco31I	GGTCTC	1 cut(s)	594
Eco32I	GATATC	2 cut(s)	133, 252
Eco47I	GGWCC	2 cut(s)	405, 929
Eco88I	CYCGRG	2 cut(s)	333, 646
EcoRII	CCWGG	1 cut(s)	231
EcoRV	GATATC	2 cut(s)	133, 252
EcoT14I	CCWWGG	3 cut(s)	546, 799, 965
EcoT38I	GRGCYC	1 cut(s)	845
ErhI	CCWWGG	3 cut(s)	546, 799, 965
Esp3I	CGTCTC	1 cut(s)	419
FaeI	CATG	7 cut(s)	13, 188, 248, 500, 550, 700, 785
FaqI	GGGAC	1 cut(s)	752
FatI	CATG	7 cut(s)	9, 184, 244, 496, 546, 696, 781
FbaI	TGATCA	3 cut(s)	40, 112, 805
Fnu4HI	GCNGC	5 cut(s)	6, 285, 349, 590, 614
FokI	GGATG	2 cut(s)	96, 237
FriOI	GRGCYC	1 cut(s)	845
Fsp4HI	GCNGC	5 cut(s)	6, 285, 349, 590, 614
GluI	GCNGC	5 cut(s)	6, 285, 349, 590, 614
HaeIII	GGCC	4 cut(s)	5, 463, 545, 964
Hin1II	CATG	7 cut(s)	13, 188, 248, 500, 550, 700, 785
HinfI	GANTC	6 cut(s)	92, 181, 257, 426, 624, 765
HphI	GGTGA	4 cut(s)	50, 138, 815, 871
Hpy188I	TCNGA	8 cut(s)	169, 256, 355, 385, 425, 655, 810, 1020
Hpy188III	TCNNGA	7 cut(s)	185, 266, 333, 398, 648, 914, 985
Hpy99I	CGWCG	1 cut(s)	956
HpyAV	CCTTC	2 cut(s)	350, 722
HpyCH4III	ACNGT	4 cut(s)	413, 642, 703, 1045
HpyCH4IV	ACGT	1 cut(s)	277
HpyCH4V	TGCA	9 cut(s)	287, 302, 506, 584, 616, 712, 814, 850, 1034
HpyF3I	CTNAG	5 cut(s)	200, 212, 217, 422, 921
HpySE526I	ACGT	1 cut(s)	277
Hsp92II	CATG	7 cut(s)	13, 188, 248, 500, 550, 700, 785
Ksp22I	TGATCA	3 cut(s)	40, 112, 805
Kzo9I	GATC	6 cut(s)	40, 112, 650, 655, 805, 910
LmnI	GCTCC	1 cut(s)	356
Lsp1109I	GCAGC	3 cut(s)	271, 600, 601
LweI	GCATC	2 cut(s)	215, 801
MaeII	ACGT	1 cut(s)	277
MaeIII	GTNAC	2 cut(s)	492, 859
MalI	GATC	6 cut(s)	42, 114, 652, 657, 807, 912
MboI	GATC	6 cut(s)	40, 112, 650, 655, 805, 910
MboII	GAAGA	9 cut(s)	87, 133, 326, 421, 459, 523, 581, 725, 886
MflI	RGATCY	2 cut(s)	650, 910
MhlI	GDGCHC	3 cut(s)	340, 647, 845
MlsI	TGGCCA	1 cut(s)	463
MluCI	AATT	3 cut(s)	117, 293, 988
MluNI	TGGCCA	1 cut(s)	463
MlyI	GAGTC	3 cut(s)	101, 435, 774
MmeI	TCCRAC	2 cut(s)	363, 540
MnlI	CCTC	4 cut(s)	565, 687, 789, 1016
Mox20I	TGGCCA	1 cut(s)	463
MroXI	GAANNNNTTC	1 cut(s)	732
MscI	TGGCCA	1 cut(s)	463
MseI	TTAA	2 cut(s)	795, 900
MslI	CAYNNNNRTG	1 cut(s)	501
Msp20I	TGGCCA	1 cut(s)	463
MspA1I	CMGCKG	1 cut(s)	592
MspR9I	CCNGG	1 cut(s)	233
Mva1269I	GAATGC	1 cut(s)	1016
MvaI	CCWGG	1 cut(s)	233
NcoI	CCATGG	1 cut(s)	546
NdeII	GATC	6 cut(s)	40, 112, 650, 655, 805, 910
NlaIII	CATG	7 cut(s)	13, 188, 248, 500, 550, 700, 785
NlaIV	GGNNCC	1 cut(s)	352
NmuCI	GTSAC	1 cut(s)	859
PaeR7I	CTCGAG	1 cut(s)	646
PagI	TCATGA	1 cut(s)	184
PctI	GAATGC	1 cut(s)	1016
PdmI	GAANNNNTTC	1 cut(s)	732
PfeI	GAWTC	3 cut(s)	181, 257, 624
PkrI	GCNGC	5 cut(s)	7, 286, 350, 591, 615
PleI	GAGTC	3 cut(s)	100, 434, 773
PpsI	GAGTC	3 cut(s)	100, 434, 773
Ppu21I	YACGTR	1 cut(s)	278
Psp6I	CCWGG	1 cut(s)	231
PspGI	CCWGG	1 cut(s)	231
PspN4I	GGNNCC	1 cut(s)	352
PspPI	GGNCC	2 cut(s)	405, 929
PstNI	CAGNNNCTG	1 cut(s)	914
PsuI	RGATCY	2 cut(s)	650, 910
PvuII	CAGCTG	1 cut(s)	592
RsaI	GTAC	1 cut(s)	276
RsaNI	GTAC	1 cut(s)	275
RseI	CAYNNNNRTG	1 cut(s)	501
SaqAI	TTAA	2 cut(s)	795, 900
SatI	GCNGC	5 cut(s)	6, 285, 349, 590, 614
Sau3AI	GATC	6 cut(s)	40, 112, 650, 655, 805, 910
Sau96I	GGNCC	2 cut(s)	405, 929
SchI	GAGTC	3 cut(s)	101, 435, 774
ScrFI	CCNGG	1 cut(s)	233
SduI	GDGCHC	3 cut(s)	340, 647, 845
SfaNI	GCATC	2 cut(s)	215, 801
SfcI	CTRYAG	1 cut(s)	191
Sfr274I	CTCGAG	1 cut(s)	646
SinI	GGWCC	2 cut(s)	405, 929
SlaI	CTCGAG	1 cut(s)	646
SmiMI	CAYNNNNRTG	1 cut(s)	501
SmlI	CTYRAG	1 cut(s)	646
SmoI	CTYRAG	1 cut(s)	646
Sse9I	AATT	3 cut(s)	117, 293, 988
SsiI	CCGC	3 cut(s)	6, 50, 348
SspI	AATATT	1 cut(s)	164
StyD4I	CCNGG	1 cut(s)	231
StyI	CCWWGG	3 cut(s)	546, 799, 965
TaaI	ACNGT	4 cut(s)	413, 642, 703, 1045
TaiI	ACGT	1 cut(s)	280
TaqI	TCGA	3 cut(s)	342, 399, 647
TaqII	GACCGA	1 cut(s)	230
TasI	AATT	3 cut(s)	117, 293, 988
TauI	GCSGC	2 cut(s)	8, 351
TfiI	GAWTC	3 cut(s)	181, 257, 624
Tru1I	TTAA	2 cut(s)	795, 900
Tru9I	TTAA	2 cut(s)	795, 900
TseFI	GTSAC	1 cut(s)	859
TseI	GCWGC	3 cut(s)	284, 589, 613
Tsp45I	GTSAC	1 cut(s)	859
TspDTI	ATGAA	5 cut(s)	249, 443, 513, 918, 1023
VpaK11BI	GGWCC	2 cut(s)	405, 929
XapI	RAATTY	1 cut(s)	117
XhoI	CTCGAG	1 cut(s)	646
XmnI	GAANNNNTTC	1 cut(s)	732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.