WD repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WD40_Prp19 | PF24814 | 192 - 389 | 4.1e-16 | Prp19 WD40 domain |
| Beta-prop_THOC3 | PF25174 | 239 - 330 | 5.6e-07 | THOC3 beta-propeller domain |
| Beta-prop_WDR5 | PF25175 | 239 - 422 | 6.3e-16 | WDR5 beta-propeller domain |
| Beta-prop_EML_2 | PF23414 | 240 - 392 | 1.7e-12 | Echinoderm microtubule-associated protein second beta-propeller |
| WD40_WDHD1_1st | PF24817 | 240 - 348 | 2e-06 | WDHD1 first WD40 domain |
| Beta-prop_WDR36-Utp21_2nd | PF25168 | 246 - 373 | 8.9e-06 | WDR36/Utp21 second beta-propeller domain |
| WD40_Gbeta | PF25391 | 249 - 373 | 7.2e-06 | G protein beta WD-40 repeat protein |
| Beta-prop_WDR3_1st | PF25173 | 274 - 421 | 1.9e-11 | WDR3 first beta-propeller domain |
| WD40_CDC20-Fz | PF24807 | 275 - 414 | 3.6e-08 | CDC20/Fizzy WD40 domain |
| WDR55 | PF24796 | 277 - 389 | 4.3e-07 | WDR55 |
| WD40_Gbeta | PF25391 | 282 - 419 | 5.4e-06 | G protein beta WD-40 repeat protein |
| WD40 | PF00400 | 304 - 342 | 1.2e-06 | WD domain, G-beta repeat |
| Beta-prop_THOC3 | PF25174 | 321 - 421 | 1.3e-13 | THOC3 beta-propeller domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 761, 922 |
| Acc36I | ACCTGC | 1 cut(s) | 1019 |
| AccI | GTMKAC | 1 cut(s) | 1094 |
| AccIII | TCCGGA | 1 cut(s) | 1225 |
| AciI | CCGC | 1 cut(s) | 93 |
| AclI | AACGTT | 1 cut(s) | 492 |
| AclWI | GGATC | 3 cut(s) | 295, 328, 1266 |
| AcoI | YGGCCR | 1 cut(s) | 1288 |
| AcsI | RAATTY | 1 cut(s) | 785 |
| AfaI | GTAC | 2 cut(s) | 568, 1264 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 278, 1021 |
| AflII | CTTAAG | 1 cut(s) | 463 |
| AflIII | ACRYGT | 1 cut(s) | 502 |
| AgsI | TTSAA | 2 cut(s) | 130, 1060 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1234 |
| AjnI | CCWGG | 4 cut(s) | 526, 609, 643, 999 |
| AluBI | AGCT | 4 cut(s) | 143, 654, 793, 1076 |
| AluI | AGCT | 4 cut(s) | 143, 654, 793, 1076 |
| Alw26I | GTCTC | 3 cut(s) | 539, 762, 867 |
| AlwI | GGATC | 3 cut(s) | 295, 328, 1266 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1052 |
| Ama87I | CYCGRG | 1 cut(s) | 661 |
| Aor13HI | TCCGGA | 1 cut(s) | 1225 |
| AoxI | GGCC | 2 cut(s) | 818, 1288 |
| ApeKI | GCWGC | 1 cut(s) | 155 |
| ApoI | RAATTY | 1 cut(s) | 785 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1036 |
| AsuHPI | GGTGA | 2 cut(s) | 626, 931 |
| AsuII | TTCGAA | 1 cut(s) | 1030 |
| AvaI | CYCGRG | 1 cut(s) | 661 |
| BaeGI | GKGCMC | 1 cut(s) | 939 |
| BbsI | GAAGAC | 2 cut(s) | 450, 1268 |
| BbvI | GCAGC | 1 cut(s) | 142 |
| BccI | CCATC | 5 cut(s) | 520, 842, 968, 1097, 1114 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 620, 654 |
| BciT130I | CCWGG | 4 cut(s) | 528, 611, 645, 1001 |
| BciVI | GTATCC | 1 cut(s) | 822 |
| BcoDI | GTCTC | 3 cut(s) | 539, 762, 867 |
| BfaI | CTAG | 3 cut(s) | 216, 237, 351 |
| BfrI | CTTAAG | 1 cut(s) | 463 |
| BfuAI | ACCTGC | 1 cut(s) | 1019 |
| BfuI | GTATCC | 1 cut(s) | 822 |
| BisI | GCNGC | 2 cut(s) | 94, 156 |
| BlsI | GCNGC | 2 cut(s) | 95, 157 |
| BmcAI | AGTACT | 1 cut(s) | 568 |
| Bme1390I | CCNGG | 4 cut(s) | 528, 611, 645, 1001 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1234 |
| BmeT110I | CYCGRG | 1 cut(s) | 661 |
| BmiI | GGNNCC | 3 cut(s) | 998, 1067, 1295 |
| BmrFI | CCNGG | 4 cut(s) | 528, 611, 645, 1001 |
| BmrI | ACTGGG | 2 cut(s) | 714, 1002 |
| BmsI | GCATC | 3 cut(s) | 640, 965, 976 |
| BmuI | ACTGGG | 2 cut(s) | 714, 1002 |
| BpiI | GAAGAC | 2 cut(s) | 450, 1268 |
| BpmI | CTGGAG | 1 cut(s) | 621 |
| Bpu14I | TTCGAA | 1 cut(s) | 1030 |
| BpuEI | CTTGAG | 3 cut(s) | 144, 543, 1301 |
| BsaJI | CCNNGG | 5 cut(s) | 184, 194, 610, 815, 1069 |
| BsaWI | WCCGGW | 3 cut(s) | 807, 1089, 1225 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 278, 1021 |
| Bse1I | ACTGG | 3 cut(s) | 720, 913, 997 |
| BseAI | TCCGGA | 1 cut(s) | 1225 |
| BseBI | CCWGG | 4 cut(s) | 528, 611, 645, 1001 |
| BseDI | CCNNGG | 5 cut(s) | 184, 194, 610, 815, 1069 |
| BseGI | GGATG | 6 cut(s) | 34, 70, 180, 523, 967, 1030 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 278, 1021 |
| BseMII | CTCAG | 2 cut(s) | 111, 471 |
| BseNI | ACTGG | 3 cut(s) | 720, 913, 997 |
| BseSI | GKGCMC | 1 cut(s) | 939 |
| BseXI | GCAGC | 1 cut(s) | 142 |
| BshFI | GGCC | 2 cut(s) | 820, 1290 |
| BsiHKCI | CYCGRG | 1 cut(s) | 661 |
| BsiSI | CCGG | 6 cut(s) | 808, 1015, 1090, 1226, 1291, 1297 |
| BslFI | GGGAC | 3 cut(s) | 254, 702, 828 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 278, 1021 |
| BsmAI | GTCTC | 3 cut(s) | 539, 762, 867 |
| BsmFI | GGGAC | 3 cut(s) | 254, 702, 828 |
| BsnI | GGCC | 2 cut(s) | 820, 1290 |
| BsoBI | CYCGRG | 1 cut(s) | 661 |
| Bsp119I | TTCGAA | 1 cut(s) | 1030 |
| Bsp1286I | GDGCHC | 1 cut(s) | 939 |
| Bsp13I | TCCGGA | 1 cut(s) | 1225 |
| Bsp143I | GATC | 5 cut(s) | 287, 320, 353, 637, 1258 |
| BspACI | CCGC | 1 cut(s) | 93 |
| BspANI | GGCC | 2 cut(s) | 820, 1290 |
| BspCNI | CTCAG | 2 cut(s) | 110, 472 |
| BspEI | TCCGGA | 1 cut(s) | 1225 |
| BspLI | GGNNCC | 3 cut(s) | 998, 1067, 1295 |
| BspMI | ACCTGC | 1 cut(s) | 1019 |
| BspPI | GGATC | 3 cut(s) | 295, 328, 1266 |
| BspT104I | TTCGAA | 1 cut(s) | 1030 |
| BspTI | CTTAAG | 1 cut(s) | 463 |
| BsrI | ACTGG | 3 cut(s) | 720, 913, 997 |
| BssECI | CCNNGG | 5 cut(s) | 184, 194, 610, 815, 1069 |
| BssMI | GATC | 5 cut(s) | 287, 320, 353, 637, 1258 |
| BssNAI | GTATAC | 1 cut(s) | 1095 |
| BssT1I | CCWWGG | 4 cut(s) | 184, 194, 815, 1069 |
| Bst1107I | GTATAC | 1 cut(s) | 1095 |
| Bst2UI | CCWGG | 4 cut(s) | 528, 611, 645, 1001 |
| Bst4CI | ACNGT | 5 cut(s) | 80, 716, 758, 919, 1271 |
| BstAFI | CTTAAG | 1 cut(s) | 463 |
| BstBI | TTCGAA | 1 cut(s) | 1030 |
| BstC8I | GCNNGC | 2 cut(s) | 629, 1131 |
| BstDEI | CTNAG | 4 cut(s) | 97, 206, 480, 798 |
| BstF5I | GGATG | 6 cut(s) | 34, 70, 180, 523, 967, 1030 |
| BstKTI | GATC | 5 cut(s) | 290, 323, 356, 640, 1261 |
| BstMAI | GTCTC | 3 cut(s) | 539, 762, 867 |
| BstMBI | GATC | 5 cut(s) | 287, 320, 353, 637, 1258 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 161, 799, 1130 |
| BstNI | CCWGG | 4 cut(s) | 528, 611, 645, 1001 |
| BstNSI | RCATGY | 2 cut(s) | 506, 1148 |
| BstSCI | CCNGG | 4 cut(s) | 526, 609, 643, 999 |
| BstSLI | GKGCMC | 1 cut(s) | 939 |
| BstV1I | GCAGC | 1 cut(s) | 142 |
| BstV2I | GAAGAC | 2 cut(s) | 450, 1268 |
| BstX2I | RGATCY | 1 cut(s) | 320 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 14 |
| BstYI | RGATCY | 1 cut(s) | 320 |
| BstZ17I | GTATAC | 1 cut(s) | 1095 |
| BsuI | GTATCC | 1 cut(s) | 822 |
| BsuRI | GGCC | 2 cut(s) | 820, 1290 |
| BtsCI | GGATG | 6 cut(s) | 34, 70, 180, 523, 967, 1030 |
| BtsIMutI | CAGTG | 2 cut(s) | 363, 727 |
| BveI | ACCTGC | 1 cut(s) | 1019 |
| Cac8I | GCNNGC | 2 cut(s) | 629, 1131 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1052 |
| Csp6I | GTAC | 2 cut(s) | 567, 1263 |
| CviAII | CATG | 5 cut(s) | 416, 503, 778, 963, 1145 |
| CviQI | GTAC | 2 cut(s) | 567, 1263 |
| DdeI | CTNAG | 4 cut(s) | 97, 206, 480, 798 |
| DpnI | GATC | 5 cut(s) | 289, 322, 355, 639, 1260 |
| DpnII | GATC | 5 cut(s) | 287, 320, 353, 637, 1258 |
| DraI | TTTAAA | 1 cut(s) | 930 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 761, 922 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1234 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 761, 922 |
| EaeI | YGGCCR | 1 cut(s) | 1288 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1234 |
| Eco130I | CCWWGG | 4 cut(s) | 184, 194, 815, 1069 |
| Eco32I | GATATC | 1 cut(s) | 1206 |
| Eco88I | CYCGRG | 1 cut(s) | 661 |
| EcoRII | CCWGG | 4 cut(s) | 526, 609, 643, 999 |
| EcoRV | GATATC | 1 cut(s) | 1206 |
| EcoT14I | CCWWGG | 4 cut(s) | 184, 194, 815, 1069 |
| ErhI | CCWWGG | 4 cut(s) | 184, 194, 815, 1069 |
| FaeI | CATG | 5 cut(s) | 419, 506, 781, 966, 1148 |
| FaqI | GGGAC | 3 cut(s) | 254, 702, 828 |
| FatI | CATG | 5 cut(s) | 415, 502, 777, 962, 1144 |
| FblI | GTMKAC | 1 cut(s) | 1094 |
| Fnu4HI | GCNGC | 2 cut(s) | 94, 156 |
| FokI | GGATG | 6 cut(s) | 41, 77, 167, 510, 954, 1037 |
| Fsp4HI | GCNGC | 2 cut(s) | 94, 156 |
| FspBI | CTAG | 3 cut(s) | 216, 237, 351 |
| GluI | GCNGC | 2 cut(s) | 94, 156 |
| GsuI | CTGGAG | 1 cut(s) | 621 |
| HaeIII | GGCC | 2 cut(s) | 820, 1290 |
| HapII | CCGG | 6 cut(s) | 808, 1015, 1090, 1226, 1291, 1297 |
| Hin1II | CATG | 5 cut(s) | 419, 506, 781, 966, 1148 |
| HinfI | GANTC | 8 cut(s) | 101, 556, 606, 762, 826, 841, 1235, 1316 |
| HpaII | CCGG | 6 cut(s) | 808, 1015, 1090, 1226, 1291, 1297 |
| HphI | GGTGA | 2 cut(s) | 626, 931 |
| Hpy166II | GTNNAC | 6 cut(s) | 549, 617, 733, 854, 898, 1095 |
| Hpy188I | TCNGA | 8 cut(s) | 100, 106, 341, 429, 481, 517, 767, 1102 |
| Hpy188III | TCNNGA | 7 cut(s) | 498, 635, 845, 881, 971, 1226, 1280 |
| Hpy8I | GTNNAC | 6 cut(s) | 549, 617, 733, 854, 898, 1095 |
| HpyAV | CCTTC | 5 cut(s) | 278, 289, 878, 1054, 1168 |
| HpyCH4III | ACNGT | 5 cut(s) | 80, 716, 758, 919, 1271 |
| HpyCH4IV | ACGT | 1 cut(s) | 492 |
| HpyCH4V | TGCA | 5 cut(s) | 303, 471, 627, 956, 1144 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 161, 799, 1130 |
| HpyF3I | CTNAG | 4 cut(s) | 97, 206, 480, 798 |
| HpySE526I | ACGT | 1 cut(s) | 492 |
| Hsp92II | CATG | 5 cut(s) | 419, 506, 781, 966, 1148 |
| Kpn2I | TCCGGA | 1 cut(s) | 1225 |
| Kzo9I | GATC | 5 cut(s) | 287, 320, 353, 637, 1258 |
| LmnI | GCTCC | 2 cut(s) | 1073, 1293 |
| Lsp1109I | GCAGC | 1 cut(s) | 142 |
| LweI | GCATC | 3 cut(s) | 640, 965, 976 |
| MaeI | CTAG | 3 cut(s) | 216, 237, 351 |
| MaeII | ACGT | 1 cut(s) | 492 |
| MaeIII | GTNAC | 4 cut(s) | 389, 432, 505, 1236 |
| MalI | GATC | 5 cut(s) | 289, 322, 355, 639, 1260 |
| MboI | GATC | 5 cut(s) | 287, 320, 353, 637, 1258 |
| MboII | GAAGA | 4 cut(s) | 56, 365, 450, 1268 |
| MflI | RGATCY | 1 cut(s) | 320 |
| MhlI | GDGCHC | 1 cut(s) | 939 |
| MluCI | AATT | 4 cut(s) | 256, 274, 785, 1185 |
| MlyI | GAGTC | 5 cut(s) | 550, 771, 850, 1244, 1310 |
| MmeI | TCCRAC | 1 cut(s) | 850 |
| MnlI | CCTC | 6 cut(s) | 19, 475, 535, 596, 657, 754 |
| MroI | TCCGGA | 1 cut(s) | 1225 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1036 |
| MseI | TTAA | 2 cut(s) | 464, 929 |
| MslI | CAYNNNNRTG | 3 cut(s) | 961, 972, 1149 |
| MspCI | CTTAAG | 1 cut(s) | 463 |
| MspI | CCGG | 6 cut(s) | 808, 1015, 1090, 1226, 1291, 1297 |
| MspR9I | CCNGG | 4 cut(s) | 528, 611, 645, 1001 |
| MvaI | CCWGG | 4 cut(s) | 528, 611, 645, 1001 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 161, 799, 1130 |
| NdeII | GATC | 5 cut(s) | 287, 320, 353, 637, 1258 |
| NlaIII | CATG | 5 cut(s) | 419, 506, 781, 966, 1148 |
| NlaIV | GGNNCC | 3 cut(s) | 998, 1067, 1295 |
| NmuCI | GTSAC | 3 cut(s) | 432, 505, 1236 |
| NspI | RCATGY | 2 cut(s) | 506, 1148 |
| NspV | TTCGAA | 1 cut(s) | 1030 |
| PaeR7I | CTCGAG | 1 cut(s) | 661 |
| PciI | ACATGT | 1 cut(s) | 502 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1036 |
| PfeI | GAWTC | 3 cut(s) | 101, 606, 826 |
| PfoI | TCCNGGA | 2 cut(s) | 526, 643 |
| PkrI | GCNGC | 2 cut(s) | 95, 157 |
| PleI | GAGTC | 5 cut(s) | 550, 770, 849, 1243, 1310 |
| PpsI | GAGTC | 5 cut(s) | 550, 770, 849, 1243, 1310 |
| PscI | ACATGT | 1 cut(s) | 502 |
| Psp1406I | AACGTT | 1 cut(s) | 492 |
| Psp6I | CCWGG | 4 cut(s) | 526, 609, 643, 999 |
| PspGI | CCWGG | 4 cut(s) | 526, 609, 643, 999 |
| PspN4I | GGNNCC | 3 cut(s) | 998, 1067, 1295 |
| PspXI | VCTCGAGB | 1 cut(s) | 661 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1292, 1324 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1052 |
| PsuI | RGATCY | 1 cut(s) | 320 |
| RsaI | GTAC | 2 cut(s) | 568, 1264 |
| RsaNI | GTAC | 2 cut(s) | 567, 1263 |
| RseI | CAYNNNNRTG | 3 cut(s) | 961, 972, 1149 |
| SaqAI | TTAA | 2 cut(s) | 464, 929 |
| SatI | GCNGC | 2 cut(s) | 94, 156 |
| Sau3AI | GATC | 5 cut(s) | 287, 320, 353, 637, 1258 |
| ScaI | AGTACT | 1 cut(s) | 568 |
| SchI | GAGTC | 5 cut(s) | 550, 771, 850, 1244, 1310 |
| ScrFI | CCNGG | 4 cut(s) | 528, 611, 645, 1001 |
| SduI | GDGCHC | 1 cut(s) | 939 |
| SfaNI | GCATC | 3 cut(s) | 640, 965, 976 |
| Sfr274I | CTCGAG | 1 cut(s) | 661 |
| SfuI | TTCGAA | 1 cut(s) | 1030 |
| SlaI | CTCGAG | 1 cut(s) | 661 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 961, 972, 1149 |
| SmlI | CTYRAG | 5 cut(s) | 159, 463, 558, 661, 1280 |
| SmoI | CTYRAG | 5 cut(s) | 159, 463, 558, 661, 1280 |
| Sse9I | AATT | 4 cut(s) | 256, 274, 785, 1185 |
| SsiI | CCGC | 1 cut(s) | 93 |
| SspMI | CTAG | 3 cut(s) | 216, 237, 351 |
| StyD4I | CCNGG | 4 cut(s) | 526, 609, 643, 999 |
| StyI | CCWWGG | 4 cut(s) | 184, 194, 815, 1069 |
| TaaI | ACNGT | 5 cut(s) | 80, 716, 758, 919, 1271 |
| TaiI | ACGT | 1 cut(s) | 495 |
| TaqI | TCGA | 2 cut(s) | 662, 1030 |
| TaqII | GACCGA | 1 cut(s) | 1071 |
| TasI | AATT | 4 cut(s) | 256, 274, 785, 1185 |
| TatI | WGTACW | 1 cut(s) | 566 |
| TauI | GCSGC | 1 cut(s) | 96 |
| TfiI | GAWTC | 3 cut(s) | 101, 606, 826 |
| Tru1I | TTAA | 2 cut(s) | 464, 929 |
| Tru9I | TTAA | 2 cut(s) | 464, 929 |
| TscAI | CASTG | 2 cut(s) | 363, 727 |
| TseFI | GTSAC | 3 cut(s) | 432, 505, 1236 |
| TseI | GCWGC | 1 cut(s) | 155 |
| Tsp45I | GTSAC | 3 cut(s) | 432, 505, 1236 |
| TspDTI | ATGAA | 4 cut(s) | 45, 129, 365, 440 |
| TspRI | CASTG | 2 cut(s) | 363, 727 |
| Vha464I | CTTAAG | 1 cut(s) | 463 |
| XapI | RAATTY | 1 cut(s) | 785 |
| XceI | RCATGY | 2 cut(s) | 506, 1148 |
| XhoI | CTCGAG | 1 cut(s) | 661 |
| XmiI | GTMKAC | 1 cut(s) | 1094 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1036 |
| XspI | CTAG | 3 cut(s) | 216, 237, 351 |
| ZrmI | AGTACT | 1 cut(s) | 568 |