Rh5CG536100

WD repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
75055746 .. 75059650
3905 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG536100.1

Sequence Viewer

Length: 303 bp
ATGGGTTATAACAAAAGTTGTGGCATTGTTGATGAAATGGAAGGTGTTCATGATGATGTGGGTGGCGAACTTCGTGATAGAGAATTGGCTAGCTTGGAGTCTGATGCTCATGCAAGTAGAGGAGAAGACATCCAAGGAATTCCTTGGGATATACTTAGCATTACTAGAGAGAAATACCGGCAAACTAGGTTAGAACAATACAAGAATTATGAAAACATCCCTAATTCCGGAGAAGGGACAGGGAAGGTCAGTGAAGTGAAAACTATATCGTGTAGACGAGTGTTGTTTAACTTCATTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

100

Amino Acids

11.32

Weight (kDa)

4.99

Isoelectric Point (pI)

24.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 9
AccI GTMKAC 1 cut(s) 274
AccIII TCCGGA 1 cut(s) 227
AcsI RAATTY 1 cut(s) 138
AfiI CCNNNNNNNGG 2 cut(s) 227, 234
AluBI AGCT 1 cut(s) 93
AluI AGCT 1 cut(s) 93
Aor13HI TCCGGA 1 cut(s) 227
ApoI RAATTY 1 cut(s) 138
Asp700I GAANNNNTTC 1 cut(s) 45
AsuNHI GCTAGC 1 cut(s) 89
BbsI GAAGAC 1 cut(s) 132
BfaI CTAG 3 cut(s) 90, 165, 186
BmsI GCATC 1 cut(s) 94
BmtI GCTAGC 1 cut(s) 93
BpiI GAAGAC 1 cut(s) 132
BsaJI CCNNGG 2 cut(s) 133, 143
BsaWI WCCGGW 1 cut(s) 227
Bsc4I CCNNNNNNNGG 2 cut(s) 227, 234
Bse118I RCCGGY 1 cut(s) 177
BseAI TCCGGA 1 cut(s) 227
BseDI CCNNGG 2 cut(s) 133, 143
BseGI GGATG 2 cut(s) 129, 216
BseLI CCNNNNNNNGG 2 cut(s) 227, 234
BseRI GAGGAG 1 cut(s) 135
BsiSI CCGG 2 cut(s) 178, 228
BslFI GGGAC 1 cut(s) 250
BslI CCNNNNNNNGG 2 cut(s) 227, 234
BsmFI GGGAC 1 cut(s) 250
Bsp13I TCCGGA 1 cut(s) 227
BspEI TCCGGA 1 cut(s) 227
BspHI TCATGA 1 cut(s) 49
BspOI GCTAGC 1 cut(s) 93
BsrFI RCCGGY 1 cut(s) 177
BssAI RCCGGY 1 cut(s) 177
BssECI CCNNGG 2 cut(s) 133, 143
BssT1I CCWWGG 2 cut(s) 133, 143
BstC8I GCNNGC 1 cut(s) 91
BstDEI CTNAG 1 cut(s) 155
BstF5I GGATG 2 cut(s) 129, 216
BstV2I GAAGAC 1 cut(s) 132
BtsCI GGATG 2 cut(s) 129, 216
BtsIMutI CAGTG 1 cut(s) 256
Cac8I GCNNGC 1 cut(s) 91
CciI TCATGA 1 cut(s) 49
Cfr10I RCCGGY 1 cut(s) 177
CspCI CAANNNNNGTGG 1 cut(s) 36
CviAII CATG 2 cut(s) 50, 110
CviJI RGCY 2 cut(s) 89, 93
CviKI_1 RGCY 2 cut(s) 89, 93
DdeI CTNAG 1 cut(s) 155
Eco130I CCWWGG 2 cut(s) 133, 143
EcoRI GAATTC 1 cut(s) 138
EcoT14I CCWWGG 2 cut(s) 133, 143
ErhI CCWWGG 2 cut(s) 133, 143
FaeI CATG 2 cut(s) 53, 113
FaiI YATR 6 cut(s) 9, 51, 111, 152, 210, 266
FaqI GGGAC 1 cut(s) 250
FatI CATG 2 cut(s) 49, 109
FblI GTMKAC 1 cut(s) 274
FokI GGATG 2 cut(s) 116, 203
FspBI CTAG 3 cut(s) 90, 165, 186
HapII CCGG 2 cut(s) 178, 228
Hin1II CATG 2 cut(s) 53, 113
HinfI GANTC 1 cut(s) 98
HpaII CCGG 2 cut(s) 178, 228
Hpy166II GTNNAC 1 cut(s) 275
Hpy188I TCNGA 1 cut(s) 103
Hpy188III TCNNGA 3 cut(s) 50, 74, 228
Hpy8I GTNNAC 1 cut(s) 275
HpyAV CCTTC 3 cut(s) 35, 227, 238
HpyCH4V TGCA 1 cut(s) 113
HpyF3I CTNAG 1 cut(s) 155
Hsp92II CATG 2 cut(s) 53, 113
Kpn2I TCCGGA 1 cut(s) 227
LpnPI CCDG 3 cut(s) 191, 225, 241
LweI GCATC 1 cut(s) 94
MaeI CTAG 3 cut(s) 90, 165, 186
MboII GAAGA 1 cut(s) 137
MluCI AATT 4 cut(s) 83, 138, 205, 223
MlyI GAGTC 1 cut(s) 107
MnlI CCTC 1 cut(s) 113
MroI TCCGGA 1 cut(s) 227
MroXI GAANNNNTTC 1 cut(s) 45
MseI TTAA 2 cut(s) 288, 301
MslI CAYNNNNRTG 1 cut(s) 54
MspI CCGG 2 cut(s) 178, 228
NheI GCTAGC 1 cut(s) 89
NlaIII CATG 2 cut(s) 53, 113
PagI TCATGA 1 cut(s) 49
PdmI GAANNNNTTC 1 cut(s) 45
PleI GAGTC 1 cut(s) 106
PpsI GAGTC 1 cut(s) 106
PsiI TTATAA 1 cut(s) 9
RseI CAYNNNNRTG 1 cut(s) 54
SaqAI TTAA 2 cut(s) 288, 301
SchI GAGTC 1 cut(s) 107
SetI ASST 4 cut(s) 46, 95, 191, 249
SfaNI GCATC 1 cut(s) 94
SmiMI CAYNNNNRTG 1 cut(s) 54
Sse9I AATT 4 cut(s) 83, 138, 205, 223
SspMI CTAG 3 cut(s) 90, 165, 186
StyI CCWWGG 2 cut(s) 133, 143
TasI AATT 4 cut(s) 83, 138, 205, 223
Tru1I TTAA 2 cut(s) 288, 301
Tru9I TTAA 2 cut(s) 288, 301
TscAI CASTG 1 cut(s) 256
TspDTI ATGAA 4 cut(s) 38, 48, 225, 283
TspRI CASTG 1 cut(s) 256
XapI RAATTY 1 cut(s) 138
XmiI GTMKAC 1 cut(s) 274
XmnI GAANNNNTTC 1 cut(s) 45
XspI CTAG 3 cut(s) 90, 165, 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.