MD05G1166100.v1.1

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
29552162 .. 29554570
2409 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1166100.v1.1.491

Sequence Viewer

Length: 1488 bp
ATGATGCCGTCTGACCTAGAACTGAAGAATGATGTGGGAAACACTGCCCTCTATTTTGCTGCTGTTTCCGGTGTCAAAAGGATTGCCGAGATAATGGTAGATAAGAATCCGAGGTTACCCCAAATCAGAGGTAGTAAAGATTCAACACCTCTTCATATGGCTACTTTGTTAGGGCACAGGGAGATGGTATGGTATCTTTACGACAAGACTGATACAATTTTGAAGGACTCCGACCGTGTGGGGCTTCTTATTGCCGCAATAGCAGCCGATCTTTATGATCTTGCACTGGATATAATTCAAAAGCACCCTGACATGGCTTTTGCTCGAGATGATGAAAATCGAGAGACTGCACTTCATGTGATGGCACGAAAACATTCAGCTTATTATAATGGAAGTCAACCGGGAGTTCTGCAACGATTCGTATTTTCAGTCCCTCGTATCAAGGTTTGCTACAACAAAAAAGTTATGCATACGCAAGCCATTGAGCTTGTGAAGCAGCTGTGGAAGAAAGTACTTACTTTAGAAAATGATTCAAAAATTAGTGATTTAATCAGAGCACCCTCTCGCTTATTGTTCAGTGCTGCTGAGTTGGGGAACATCGACTTCCTAATCATACTTATGAGAACATACCCTAATCTTATATGGAAAGTTGATGAACAAAATCGAAGCATATTTCACACTGCAGTTGTTCACCGGCAGGAGAAAGTTTTCAATCTCATATATGAATTAGGTGGACTGAAAGATATAATTGCATCTTACAAAGACGAAGACAATAATAATATGCTTCATTTGGCAGCCAAACTTGCACCGGATGATCGATTAAATATTGATACGGGGGCAGCATTGCAATTCAGAAGAGAGTTACAATGGTTTAAGGAAGTGAAGAAGATCGTCCAACCATTATACAAGGAAATGAGAAACTCGGATGGAAAAACACCTCAAGTCCTATTCACTGAAGAGCACAAGGACTTGTTACGAGAAGGAGAAAAGTGGATGAAGGGCACTGCATCATCGTGCATGCTTGTGGCAACGCTCATTGCCACCGTAATGTTTGCCGTTTTCTCCACAGTACCGGGCGGAAACAACAACGACACGGGCATTCCGATTTTTCTCAACTCGAGGGCCTTCATGGTTTTTGCCATATCAGATGCACTCTCCCTCGTCTCCTCCGCCACATCAATCTTGAGTTTCCTGTCCATTCTTACATCACGCTATGCAGAAGAAGATTTCCTCCACTCGCTACCGAATCGGTTGATTGTAGGACTGGCAACCCTTTTCATCTCTATAGTTACCATGATGATCACGTTCGTAGCGTCGCTATACATCGTTCTAGGCCATGGATATCAAGGGATCAAATTTCCAATAACTTTGGCCGCGGGCGTTCCTGTTAGTTTCTATGCTCTGTTACAGTTTCCTCTTCTTGGAGATATGATCAGTCATGCTTATATTTCAAGGGTATCCTTTCGTCCCATGGGGGCACTCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

496

Amino Acids

55.71

Weight (kDa)

8.55

Isoelectric Point (pI)

32.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 4 - 71 3.1e-08 Ankyrin repeats (3 copies)
PGG PF13962 329 - 443 4.1e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 387
AccII CGCG 1 cut(s) 1376
AciI CCGC 5 cut(s) 255, 1077, 1170, 1374, 1376
AclWI GGATC 1 cut(s) 1358
AcoI YGGCCR 1 cut(s) 1371
AcsI RAATTY 1 cut(s) 1355
AcuI CTGAAG 2 cut(s) 44, 975
AfaI GTAC 2 cut(s) 513, 1071
AfiI CCNNNNNNNGG 2 cut(s) 313, 1421
AgsI TTSAA 6 cut(s) 144, 223, 299, 534, 712, 1452
AluBI AGCT 3 cut(s) 380, 487, 499
AluI AGCT 3 cut(s) 380, 487, 499
Alw21I GWGCWC 2 cut(s) 559, 963
Alw26I GTCTC 2 cut(s) 338, 1168
AlwI GGATC 1 cut(s) 1358
Ama87I CYCGRG 2 cut(s) 324, 1117
AoxI GGCC 3 cut(s) 1122, 1333, 1371
ApeKI GCWGC 6 cut(s) 59, 263, 496, 581, 794, 839
ApoI RAATTY 1 cut(s) 1355
ArsI GACNNNNNNTTYG 2 cut(s) 302, 334
Asp700I GAANNNNTTC 2 cut(s) 373, 707
AspS9I GGNCC 1 cut(s) 1122
AsuC2I CCSGG 2 cut(s) 402, 1074
AsuHPI GGTGA 1 cut(s) 683
AvaI CYCGRG 2 cut(s) 324, 1117
BaeGI GKGCMC 3 cut(s) 177, 1004, 1480
BbsI GAAGAC 1 cut(s) 774
Bbv12I GWGCWC 2 cut(s) 559, 963
BbvI GCAGC 6 cut(s) 46, 275, 508, 568, 806, 851
BccI CCATC 3 cut(s) 178, 355, 920
BceAI ACGGC 1 cut(s) 1040
BciVI GTATCC 1 cut(s) 1468
BclI TGATCA 2 cut(s) 1299, 1431
BcnI CCSGG 2 cut(s) 402, 1074
BcoDI GTCTC 2 cut(s) 338, 1168
BfaI CTAG 2 cut(s) 17, 1331
BfmI CTRYAG 2 cut(s) 681, 1284
BfuI GTATCC 1 cut(s) 1468
BisI GCNGC 8 cut(s) 60, 255, 264, 497, 582, 795, 840, 1374
BlsI GCNGC 8 cut(s) 61, 256, 265, 498, 583, 796, 841, 1375
BmcAI AGTACT 1 cut(s) 513
Bme1390I CCNGG 2 cut(s) 402, 1074
BmeT110I CYCGRG 2 cut(s) 324, 1117
BmgT120I GGNCC 1 cut(s) 1122
BmrFI CCNGG 2 cut(s) 402, 1074
BmsI GCATC 3 cut(s) 761, 1016, 1138
BpiI GAAGAC 1 cut(s) 774
BpuEI CTTGAG 2 cut(s) 924, 1204
BpuMI CCSGG 2 cut(s) 402, 1074
Bsa29I ATCGAT 1 cut(s) 817
BsaBI GATNNNNATC 2 cut(s) 105, 336
BsaJI CCNNGG 4 cut(s) 110, 1336, 1374, 1470
BsaWI WCCGGW 2 cut(s) 68, 808
Bsc4I CCNNNNNNNGG 2 cut(s) 313, 1421
Bse118I RCCGGY 1 cut(s) 693
Bse1I ACTGG 2 cut(s) 291, 1269
Bse3DI GCAATG 2 cut(s) 842, 1035
Bse8I GATNNNNATC 2 cut(s) 105, 336
BseCI ATCGAT 1 cut(s) 817
BseDI CCNNGG 4 cut(s) 110, 1336, 1374, 1470
BseGI GGATG 3 cut(s) 817, 931, 999
BseJI GATNNNNATC 2 cut(s) 105, 336
BseLI CCNNNNNNNGG 2 cut(s) 313, 1421
BseMI GCAATG 2 cut(s) 842, 1035
BseMII CTCAG 1 cut(s) 576
BseNI ACTGG 2 cut(s) 291, 1269
BseRI GAGGAG 1 cut(s) 1156
BseSI GKGCMC 3 cut(s) 177, 1004, 1480
BseXI GCAGC 6 cut(s) 46, 275, 508, 568, 806, 851
BsgI GTGCAG 1 cut(s) 333
Bsh1236I CGCG 1 cut(s) 1376
Bsh1285I CGRYCG 1 cut(s) 235
BshFI GGCC 3 cut(s) 1124, 1335, 1373
BshVI ATCGAT 1 cut(s) 817
BsiEI CGRYCG 1 cut(s) 235
BsiHKAI GWGCWC 2 cut(s) 559, 963
BsiHKCI CYCGRG 2 cut(s) 324, 1117
BsiSI CCGG 5 cut(s) 69, 401, 694, 809, 1073
BslFI GGGAC 2 cut(s) 416, 1452
BslI CCNNNNNNNGG 2 cut(s) 313, 1421
BsmAI GTCTC 2 cut(s) 338, 1168
BsmBI CGTCTC 1 cut(s) 1168
BsmFI GGGAC 2 cut(s) 416, 1452
BsmI GAATGC 1 cut(s) 1098
BsnI GGCC 3 cut(s) 1124, 1335, 1373
BsoBI CYCGRG 2 cut(s) 324, 1117
Bsp1286I GDGCHC 5 cut(s) 177, 559, 963, 1004, 1480
Bsp143I GATC 7 cut(s) 268, 277, 814, 888, 1299, 1350, 1431
Bsp19I CCATGG 2 cut(s) 1336, 1470
BspACI CCGC 5 cut(s) 255, 1077, 1170, 1374, 1376
BspANI GGCC 3 cut(s) 1124, 1335, 1373
BspCNI CTCAG 1 cut(s) 577
BspDI ATCGAT 1 cut(s) 817
BspFNI CGCG 1 cut(s) 1376
BspMAI CTGCAG 1 cut(s) 685
BspPI GGATC 1 cut(s) 1358
BspQI GCTCTTC 1 cut(s) 951
BsrDI GCAATG 2 cut(s) 842, 1035
BsrFI RCCGGY 1 cut(s) 693
BsrI ACTGG 2 cut(s) 291, 1269
BssAI RCCGGY 1 cut(s) 693
BssECI CCNNGG 4 cut(s) 110, 1336, 1374, 1470
BssMI GATC 7 cut(s) 268, 277, 814, 888, 1299, 1350, 1431
BssT1I CCWWGG 2 cut(s) 1336, 1470
Bst4CI ACNGT 4 cut(s) 236, 1045, 1069, 1410
Bst6I CTCTTC 4 cut(s) 156, 850, 951, 1422
BstC8I GCNNGC 3 cut(s) 477, 1019, 1378
BstDEI CTNAG 1 cut(s) 585
BstDSI CCRYGG 3 cut(s) 1336, 1374, 1470
BstEII GGTNACC 1 cut(s) 114
BstF5I GGATG 3 cut(s) 817, 931, 999
BstFNI CGCG 1 cut(s) 1376
BstKTI GATC 7 cut(s) 271, 280, 817, 891, 1302, 1353, 1434
BstMAI GTCTC 2 cut(s) 338, 1168
BstMBI GATC 7 cut(s) 268, 277, 814, 888, 1299, 1350, 1431
BstMCI CGRYCG 1 cut(s) 235
BstMWI GCNNNNNNNGC 4 cut(s) 260, 263, 493, 803
BstNSI RCATGY 1 cut(s) 1021
BstPI GGTNACC 1 cut(s) 114
BstSCI CCNGG 2 cut(s) 400, 1072
BstSFI CTRYAG 2 cut(s) 681, 1284
BstSLI GKGCMC 3 cut(s) 177, 1004, 1480
BstUI CGCG 1 cut(s) 1376
BstV1I GCAGC 6 cut(s) 46, 275, 508, 568, 806, 851
BstV2I GAAGAC 1 cut(s) 774
Bsu15I ATCGAT 1 cut(s) 817
BsuI GTATCC 1 cut(s) 1468
BsuRI GGCC 3 cut(s) 1124, 1335, 1373
BsuTUI ATCGAT 1 cut(s) 817
BtgI CCRYGG 3 cut(s) 1336, 1374, 1470
BtsCI GGATG 3 cut(s) 817, 931, 999
BtsI GCAGTG 3 cut(s) 42, 678, 1002
BtsIMutI CAGTG 6 cut(s) 42, 284, 583, 678, 951, 1002
Cac8I GCNNGC 3 cut(s) 477, 1019, 1378
Cfr10I RCCGGY 1 cut(s) 693
Cfr13I GGNCC 1 cut(s) 1122
Cfr42I CCGCGG 1 cut(s) 1377
ClaI ATCGAT 1 cut(s) 817
CseI GACGC 1 cut(s) 1302
Csp6I GTAC 2 cut(s) 512, 1070
CviAII CATG 8 cut(s) 313, 356, 1018, 1129, 1294, 1337, 1439, 1471
CviQI GTAC 2 cut(s) 512, 1070
DdeI CTNAG 1 cut(s) 585
DpnI GATC 7 cut(s) 270, 279, 816, 890, 1301, 1352, 1433
DpnII GATC 7 cut(s) 268, 277, 814, 888, 1299, 1350, 1431
EaeI YGGCCR 1 cut(s) 1371
Eam1104I CTCTTC 4 cut(s) 156, 850, 951, 1422
EarI CTCTTC 4 cut(s) 156, 850, 951, 1422
EciI GGCGGA 2 cut(s) 1092, 1159
Eco130I CCWWGG 2 cut(s) 1336, 1470
Eco32I GATATC 1 cut(s) 1343
Eco57I CTGAAG 2 cut(s) 44, 975
Eco88I CYCGRG 2 cut(s) 324, 1117
Eco91I GGTNACC 1 cut(s) 114
EcoO109I RGGNCCY 1 cut(s) 1122
EcoO65I GGTNACC 1 cut(s) 114
EcoRV GATATC 1 cut(s) 1343
EcoT14I CCWWGG 2 cut(s) 1336, 1470
EcoT22I ATGCAT 1 cut(s) 471
ErhI CCWWGG 2 cut(s) 1336, 1470
Esp3I CGTCTC 1 cut(s) 1168
FaeI CATG 8 cut(s) 316, 359, 1021, 1132, 1297, 1340, 1442, 1474
FaqI GGGAC 2 cut(s) 416, 1452
FatI CATG 8 cut(s) 312, 355, 1017, 1128, 1293, 1336, 1438, 1470
FauI CCCGC 1 cut(s) 1369
FauNDI CATATG 1 cut(s) 156
FbaI TGATCA 2 cut(s) 1299, 1431
Fnu4HI GCNGC 8 cut(s) 60, 255, 264, 497, 582, 795, 840, 1374
FokI GGATG 3 cut(s) 824, 938, 1006
Fsp4HI GCNGC 8 cut(s) 60, 255, 264, 497, 582, 795, 840, 1374
FspBI CTAG 2 cut(s) 17, 1331
GluI GCNGC 8 cut(s) 60, 255, 264, 497, 582, 795, 840, 1374
HaeIII GGCC 3 cut(s) 1124, 1335, 1373
HapII CCGG 5 cut(s) 69, 401, 694, 809, 1073
HgaI GACGC 1 cut(s) 1302
Hin1II CATG 8 cut(s) 316, 359, 1021, 1132, 1297, 1340, 1442, 1474
HincII GTYRAC 1 cut(s) 398
HindII GTYRAC 1 cut(s) 398
HinfI GANTC 6 cut(s) 106, 140, 227, 417, 530, 1246
HpaII CCGG 5 cut(s) 69, 401, 694, 809, 1073
HphI GGTGA 1 cut(s) 683
Hpy166II GTNNAC 3 cut(s) 398, 691, 734
Hpy188I TCNGA 9 cut(s) 13, 111, 128, 232, 554, 854, 925, 1104, 1147
Hpy188III TCNNGA 3 cut(s) 326, 341, 1183
Hpy8I GTNNAC 3 cut(s) 398, 691, 734
Hpy99I CGWCG 1 cut(s) 1318
HpyAV CCTTC 4 cut(s) 217, 974, 991, 1135
HpyCH4III ACNGT 4 cut(s) 236, 1045, 1069, 1410
HpyCH4IV ACGT 1 cut(s) 1304
HpyF10VI GCNNNNNNNGC 4 cut(s) 260, 263, 493, 803
HpyF3I CTNAG 1 cut(s) 585
HpySE526I ACGT 1 cut(s) 1304
Hsp92II CATG 8 cut(s) 316, 359, 1021, 1132, 1297, 1340, 1442, 1474
Ksp22I TGATCA 2 cut(s) 1299, 1431
KspI CCGCGG 1 cut(s) 1377
Kzo9I GATC 7 cut(s) 268, 277, 814, 888, 1299, 1350, 1431
LguI GCTCTTC 1 cut(s) 951
Lsp1109I GCAGC 6 cut(s) 46, 275, 508, 568, 806, 851
LweI GCATC 3 cut(s) 761, 1016, 1138
MaeI CTAG 2 cut(s) 17, 1331
MaeII ACGT 1 cut(s) 1304
MaeIII GTNAC 5 cut(s) 114, 861, 972, 1288, 1404
MalI GATC 7 cut(s) 270, 279, 816, 890, 1301, 1352, 1433
MboI GATC 7 cut(s) 268, 277, 814, 888, 1299, 1350, 1431
MhlI GDGCHC 5 cut(s) 177, 559, 963, 1004, 1480
MluCI AATT 7 cut(s) 216, 294, 537, 725, 747, 848, 1355
MlyI GAGTC 1 cut(s) 221
MmeI TCCRAC 2 cut(s) 255, 919
Mph1103I ATGCAT 1 cut(s) 471
MroXI GAANNNNTTC 2 cut(s) 373, 707
MseI TTAA 3 cut(s) 548, 821, 873
MslI CAYNNNNRTG 4 cut(s) 617, 1012, 1022, 1046
MspA1I CMGCKG 2 cut(s) 499, 1376
MspI CCGG 5 cut(s) 69, 401, 694, 809, 1073
MspR9I CCNGG 2 cut(s) 402, 1074
Mva1269I GAATGC 1 cut(s) 1098
MvnI CGCG 1 cut(s) 1376
MwoI GCNNNNNNNGC 4 cut(s) 260, 263, 493, 803
NciI CCSGG 2 cut(s) 402, 1074
NcoI CCATGG 2 cut(s) 1336, 1470
NdeI CATATG 1 cut(s) 156
NdeII GATC 7 cut(s) 268, 277, 814, 888, 1299, 1350, 1431
NlaIII CATG 8 cut(s) 316, 359, 1021, 1132, 1297, 1340, 1442, 1474
NmeAIII GCCGAG 1 cut(s) 112
NsiI ATGCAT 1 cut(s) 471
NspI RCATGY 1 cut(s) 1021
PaeI GCATGC 1 cut(s) 1021
PaeR7I CTCGAG 2 cut(s) 324, 1117
PciSI GCTCTTC 1 cut(s) 951
PcsI WCGNNNNNNNCGW 2 cut(s) 1100, 1310
PctI GAATGC 1 cut(s) 1098
PdmI GAANNNNTTC 2 cut(s) 373, 707
PfeI GAWTC 5 cut(s) 106, 140, 417, 530, 1246
PkrI GCNGC 8 cut(s) 61, 256, 265, 498, 583, 796, 841, 1375
PleI GAGTC 1 cut(s) 221
PpsI GAGTC 1 cut(s) 221
PsiI TTATAA 1 cut(s) 387
PspEI GGTNACC 1 cut(s) 114
PspPI GGNCC 1 cut(s) 1122
PspXI VCTCGAGB 1 cut(s) 1117
PstI CTGCAG 1 cut(s) 685
PvuII CAGCTG 1 cut(s) 499
RsaI GTAC 2 cut(s) 513, 1071
RsaNI GTAC 2 cut(s) 512, 1070
RseI CAYNNNNRTG 4 cut(s) 617, 1012, 1022, 1046
SacII CCGCGG 1 cut(s) 1377
SapI GCTCTTC 1 cut(s) 951
SaqAI TTAA 3 cut(s) 548, 821, 873
SatI GCNGC 8 cut(s) 60, 255, 264, 497, 582, 795, 840, 1374
Sau3AI GATC 7 cut(s) 268, 277, 814, 888, 1299, 1350, 1431
Sau96I GGNCC 1 cut(s) 1122
ScaI AGTACT 1 cut(s) 513
SchI GAGTC 1 cut(s) 221
ScrFI CCNGG 2 cut(s) 402, 1074
SduI GDGCHC 5 cut(s) 177, 559, 963, 1004, 1480
SfaNI GCATC 3 cut(s) 761, 1016, 1138
SfcI CTRYAG 2 cut(s) 681, 1284
Sfr274I CTCGAG 2 cut(s) 324, 1117
Sfr303I CCGCGG 1 cut(s) 1377
SgrBI CCGCGG 1 cut(s) 1377
SlaI CTCGAG 2 cut(s) 324, 1117
SmiMI CAYNNNNRTG 4 cut(s) 617, 1012, 1022, 1046
SmlI CTYRAG 4 cut(s) 324, 939, 1117, 1183
SmoI CTYRAG 4 cut(s) 324, 939, 1117, 1183
SphI GCATGC 1 cut(s) 1021
Sse9I AATT 7 cut(s) 216, 294, 537, 725, 747, 848, 1355
SsiI CCGC 5 cut(s) 255, 1077, 1170, 1374, 1376
SspI AATATT 1 cut(s) 826
SspMI CTAG 2 cut(s) 17, 1331
StyD4I CCNGG 2 cut(s) 400, 1072
StyI CCWWGG 2 cut(s) 1336, 1470
TaaI ACNGT 4 cut(s) 236, 1045, 1069, 1410
TaiI ACGT 1 cut(s) 1307
TaqI TCGA 6 cut(s) 325, 340, 600, 664, 817, 1118
TasI AATT 7 cut(s) 216, 294, 537, 725, 747, 848, 1355
TatI WGTACW 1 cut(s) 511
TauI GCSGC 2 cut(s) 257, 1376
TfiI GAWTC 5 cut(s) 106, 140, 417, 530, 1246
Tru1I TTAA 3 cut(s) 548, 821, 873
Tru9I TTAA 3 cut(s) 548, 821, 873
TscAI CASTG 6 cut(s) 49, 291, 583, 685, 958, 1009
TseI GCWGC 6 cut(s) 59, 263, 496, 581, 794, 839
TspDTI ATGAA 9 cut(s) 143, 344, 348, 669, 738, 776, 1010, 1117, 1267
TspRI CASTG 6 cut(s) 49, 291, 583, 685, 958, 1009
XapI RAATTY 1 cut(s) 1355
XceI RCATGY 1 cut(s) 1021
XhoI CTCGAG 2 cut(s) 324, 1117
XmnI GAANNNNTTC 2 cut(s) 373, 707
XspI CTAG 2 cut(s) 17, 1331
ZrmI AGTACT 1 cut(s) 513
Zsp2I ATGCAT 1 cut(s) 471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.