Rh2BG249600

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0001853
Physical Location & Seq
Forward (+)
25570307 .. 25570910
604 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG249600.1

Sequence Viewer

Length: 300 bp
ATGGTGGAGGTTAATCCGAGATTACCTCGGATCCGAGGCAGTAACAATTCAACAGCTCTGCATATGGCTACTTTGCTAGGGCACAGGGAGATGGTACGGTATCTTTACAGCAAGACTAAAAGAATTTTGACCTACCAGGACCGTGTGGGGCTTCTTATTGCTGCCATAACAGCAGATCTTTATGATGTAGCTCTGGATATTGTTAAACAACACCCTGAAATGGCTCTTGCTCGAGATGAAAACGAAGAGACTGCACTCCATTCCCCAGAAATTTCAAGCGTTCCTGTGAAGAAAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

99

Amino Acids

11.24

Weight (kDa)

9.1

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 25, 38
AcsI RAATTY 2 cut(s) 123, 270
AfaI GTAC 1 cut(s) 96
AfiI CCNNNNNNNGG 1 cut(s) 220
AgsI TTSAA 2 cut(s) 51, 276
AjnI CCWGG 1 cut(s) 135
AluBI AGCT 2 cut(s) 56, 191
AluI AGCT 2 cut(s) 56, 191
Alw26I GTCTC 1 cut(s) 242
AlwI GGATC 2 cut(s) 25, 38
Ama87I CYCGRG 1 cut(s) 231
ApeKI GCWGC 1 cut(s) 161
ApoI RAATTY 2 cut(s) 123, 270
AspS9I GGNCC 1 cut(s) 139
AvaI CYCGRG 1 cut(s) 231
AvaII GGWCC 1 cut(s) 139
BaeGI GKGCMC 1 cut(s) 84
BamHI GGATCC 1 cut(s) 30
BbvI GCAGC 1 cut(s) 148
BccI CCATC 1 cut(s) 85
BcgI CGANNNNNNTGC 2 cut(s) 233, 267
BciT130I CCWGG 1 cut(s) 137
BcoDI GTCTC 1 cut(s) 242
BfaI CTAG 1 cut(s) 77
BglII AGATCT 1 cut(s) 175
BisI GCNGC 1 cut(s) 162
BlsI GCNGC 1 cut(s) 163
Bme1390I CCNGG 1 cut(s) 137
Bme18I GGWCC 1 cut(s) 139
BmeT110I CYCGRG 1 cut(s) 231
BmgT120I GGNCC 1 cut(s) 139
BmiI GGNNCC 1 cut(s) 32
BmrFI CCNGG 1 cut(s) 137
BplI GAGNNNNNCTC 2 cut(s) 10, 42
BsaJI CCNNGG 2 cut(s) 26, 34
Bsc4I CCNNNNNNNGG 1 cut(s) 220
BseBI CCWGG 1 cut(s) 137
BseDI CCNNGG 2 cut(s) 26, 34
BseLI CCNNNNNNNGG 1 cut(s) 220
BseSI GKGCMC 1 cut(s) 84
BseXI GCAGC 1 cut(s) 148
BsgI GTGCAG 1 cut(s) 237
BsiHKCI CYCGRG 1 cut(s) 231
BslI CCNNNNNNNGG 1 cut(s) 220
BsmAI GTCTC 1 cut(s) 242
BsoBI CYCGRG 1 cut(s) 231
Bsp1286I GDGCHC 1 cut(s) 84
Bsp143I GATC 2 cut(s) 30, 175
BspLI GGNNCC 1 cut(s) 32
BspPI GGATC 2 cut(s) 25, 38
BssECI CCNNGG 2 cut(s) 26, 34
BssMI GATC 2 cut(s) 30, 175
Bst2UI CCWGG 1 cut(s) 137
Bst4CI ACNGT 2 cut(s) 99, 143
Bst6I CTCTTC 1 cut(s) 240
BstKTI GATC 2 cut(s) 33, 178
BstMAI GTCTC 1 cut(s) 242
BstMBI GATC 2 cut(s) 30, 175
BstMWI GCNNNNNNNGC 1 cut(s) 170
BstNI CCWGG 1 cut(s) 137
BstSCI CCNGG 1 cut(s) 135
BstSLI GKGCMC 1 cut(s) 84
BstV1I GCAGC 1 cut(s) 148
BstX2I RGATCY 2 cut(s) 30, 175
BstYI RGATCY 2 cut(s) 30, 175
Cfr13I GGNCC 1 cut(s) 139
Csp6I GTAC 1 cut(s) 95
CviJI RGCY 5 cut(s) 56, 68, 151, 191, 224
CviKI_1 RGCY 5 cut(s) 56, 68, 151, 191, 224
CviQI GTAC 1 cut(s) 95
DpnI GATC 2 cut(s) 32, 177
DpnII GATC 2 cut(s) 30, 175
Eam1104I CTCTTC 1 cut(s) 240
EarI CTCTTC 1 cut(s) 240
Eco47I GGWCC 1 cut(s) 139
Eco88I CYCGRG 1 cut(s) 231
EcoRII CCWGG 1 cut(s) 135
FaiI YATR 4 cut(s) 63, 65, 167, 183
FauNDI CATATG 1 cut(s) 63
Fnu4HI GCNGC 1 cut(s) 162
Fsp4HI GCNGC 1 cut(s) 162
FspBI CTAG 1 cut(s) 77
GluI GCNGC 1 cut(s) 162
Hpy188I TCNGA 3 cut(s) 18, 30, 35
Hpy188III TCNNGA 2 cut(s) 194, 233
HpyCH4III ACNGT 2 cut(s) 99, 143
HpyCH4V TGCA 2 cut(s) 61, 254
HpyF10VI GCNNNNNNNGC 1 cut(s) 170
Kzo9I GATC 2 cut(s) 30, 175
LpnPI CCDG 6 cut(s) 70, 122, 149, 179, 228, 279
Lsp1109I GCAGC 1 cut(s) 148
MaeI CTAG 1 cut(s) 77
MaeIII GTNAC 1 cut(s) 41
MalI GATC 2 cut(s) 32, 177
MboI GATC 2 cut(s) 30, 175
MboII GAAGA 1 cut(s) 257
MflI RGATCY 2 cut(s) 30, 175
MhlI GDGCHC 1 cut(s) 84
MluCI AATT 3 cut(s) 46, 123, 270
MnlI CCTC 2 cut(s) 29, 36
MseI TTAA 2 cut(s) 12, 204
MspR9I CCNGG 1 cut(s) 137
MvaI CCWGG 1 cut(s) 137
MwoI GCNNNNNNNGC 1 cut(s) 170
NdeI CATATG 1 cut(s) 63
NdeII GATC 2 cut(s) 30, 175
NlaIV GGNNCC 1 cut(s) 32
PaeR7I CTCGAG 1 cut(s) 231
PkrI GCNGC 1 cut(s) 163
Psp6I CCWGG 1 cut(s) 135
PspGI CCWGG 1 cut(s) 135
PspN4I GGNNCC 1 cut(s) 32
PspPI GGNCC 1 cut(s) 139
PsuI RGATCY 2 cut(s) 30, 175
RsaI GTAC 1 cut(s) 96
RsaNI GTAC 1 cut(s) 95
SaqAI TTAA 2 cut(s) 12, 204
SatI GCNGC 1 cut(s) 162
Sau3AI GATC 2 cut(s) 30, 175
Sau96I GGNCC 1 cut(s) 139
ScrFI CCNGG 1 cut(s) 137
SduI GDGCHC 1 cut(s) 84
SetI ASST 6 cut(s) 12, 28, 58, 134, 193, 299
Sfr274I CTCGAG 1 cut(s) 231
SinI GGWCC 1 cut(s) 139
SlaI CTCGAG 1 cut(s) 231
SmlI CTYRAG 1 cut(s) 231
SmoI CTYRAG 1 cut(s) 231
Sse9I AATT 3 cut(s) 46, 123, 270
SspMI CTAG 1 cut(s) 77
StyD4I CCNGG 1 cut(s) 135
TaaI ACNGT 2 cut(s) 99, 143
TaqI TCGA 1 cut(s) 232
TasI AATT 3 cut(s) 46, 123, 270
Tru1I TTAA 2 cut(s) 12, 204
Tru9I TTAA 2 cut(s) 12, 204
TseI GCWGC 1 cut(s) 161
TspDTI ATGAA 1 cut(s) 252
VpaK11BI GGWCC 1 cut(s) 139
XapI RAATTY 2 cut(s) 123, 270
XhoI CTCGAG 1 cut(s) 231
XspI CTAG 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.