Rh5DG414600

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
65898264 .. 65916546
18283 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG414600.1

Sequence Viewer

Length: 1452 bp
ATGATAGGCTTTCAAAAGCTTGTACGTAGCATCTACTTAATTTGCAACAAAGTTTTCACAGTTTCTAGCAGGATCATGTCAGAAGCTTCATCAACGGAAGCAGTAGCGTCATCGCCAGGGTCATCGCCGAATACCCATGAAAATTTGCAGGAGCAATCCAGACAAAAAAGACAGGGGATAAGGAATCCACGGGGTCACCGTCATCCATTACCGCCTGGCCTGGGGACGCCAATTATAGCAATCATCAGTAGTCCGCCGGTGAATAATATGTATATGCATGAACCCAATAACAGCGCAGATCACCCTCTACGACCACCAACACCACCACATCCCAATTTCGTCCCAAATCATCAAAATTTCATTTCACCGATGATAAGAACGGACCTAGTTACCTATGCCTCTCTGCATCTTGCTGCTCTTAACGGTGACTGGATTACTGCTTGGAATTTGTTGAAAGATAATCCGGCAGCTGTGAGGGCAAAAATCACAAAGGGTTCGGAAACTGCTCTTCACATTGCTGCTGGGGCCAAACACACAATGTTTGTGGAGGAGATTGTTAAATGGATGAATAAAAAAGACCTCGAAGTGAAGAATGATGTGGAAAACACCGCCCTTTATTTTGCTGCTGTATCTGGTGTAAAAAGGATAGCTGAGGTAATGGTGAATAAGAATGAAAGGTTACCCCGAATCCGAGGTAGTAAAGGTTCAACACCTCTCCATATGGCTGCATTGTTAGGCCATAAGGAGATGGTATGGTATCTTTACGATAAGACTGATACAATTTTGACAGACAATGATCGTGTGGAGCTTCTTATTGCTGCCATAACATCAGATCTTTACGATGTAGCACTGCATATTATCCAAAAGCACCCGGAAATGGCTCTGGCCCGTGATGAGAATGGAGAGACTGCACTTCATATAATGGCCCGAAAACCTTTAGCATATTGCAGTCGACATCAGCTCGAAATTTGGAAACGGTGCTTATTTTCAGTTACCAATATTAAGGTTACCTGCGAAAAAGGTATCATGCATGAACTTGTGGAACAGCTGTGGAATAAAGTACTGACATTAGAAATTGATTCAAAGATAAGCGATTTTATTCGAGCACCCTCTCGCTTATTGTTTAGTGCTGCCGAATTAGGGAACATTGACTTTCTGATTATACTTATGAGATCATACCCCAATCTTATTTGGAAACTTGATGAGCAAAATCGAAGCATATTCCACACTGCAGTGGTTCACAGGCAGGAGAAAGTTTTCAGCCTCATTTATGAATTAGGTGGAATAAAAGATTTGATAGCATCTTATAAAGATGATGACGATAATAATATGCTTCATTTGGCTGCAAAGCTTGCACCTGCCAATCGTTTGGATGCTGATACTGGAGCAGCATTGCAATTGAGAAGAGAGTTGCATTGGTTTAAGTTGAGGGCCCCACTGTTCCACTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

483

Amino Acids

54.66

Weight (kDa)

8.93

Isoelectric Point (pI)

47.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 135 - 223 4.4e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 184 - 259 3.9e-10 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1308
AarI CACCTGC 1 cut(s) 1366
Acc36I ACCTGC 2 cut(s) 1019, 1366
AccI GTMKAC 1 cut(s) 952
AciI CCGC 3 cut(s) 212, 254, 609
AclWI GGATC 1 cut(s) 80
AcsI RAATTY 4 cut(s) 142, 355, 445, 966
AcyI GRCGYC 1 cut(s) 227
AfaI GTAC 2 cut(s) 24, 1062
AfiI CCNNNNNNNGG 3 cut(s) 221, 877, 1140
AgsI TTSAA 4 cut(s) 14, 454, 708, 1083
AjnI CCWGG 3 cut(s) 115, 214, 219
AleI CACNNNNGTG 1 cut(s) 1232
AluBI AGCT 8 cut(s) 19, 86, 470, 650, 808, 961, 1048, 1351
AluI AGCT 8 cut(s) 19, 86, 470, 650, 808, 961, 1048, 1351
Alw21I GWGCWC 1 cut(s) 1108
Alw26I GTCTC 1 cut(s) 899
AlwI GGATC 1 cut(s) 80
AoxI GGCC 6 cut(s) 217, 525, 736, 885, 924, 1431
ApaI GGGCCC 1 cut(s) 1435
ApeKI GCWGC 9 cut(s) 413, 467, 518, 623, 725, 818, 1130, 1343, 1388
ApoI RAATTY 4 cut(s) 142, 355, 445, 966
Asp700I GAANNNNTTC 1 cut(s) 1256
AspLEI GCGC 1 cut(s) 296
AspS9I GGNCC 6 cut(s) 382, 525, 886, 925, 1431, 1432
AsuC2I CCSGG 1 cut(s) 872
AsuHPI GGTGA 6 cut(s) 188, 271, 293, 357, 437, 673
AvaII GGWCC 1 cut(s) 382
BaeGI GKGCMC 1 cut(s) 1435
BanII GRGCYC 1 cut(s) 1435
Bbv12I GWGCWC 1 cut(s) 1108
BbvCI CCTCAGC 1 cut(s) 651
BbvI GCAGC 9 cut(s) 400, 479, 505, 610, 712, 805, 1117, 1330, 1400
BccI CCATC 1 cut(s) 742
BciT130I CCWGG 3 cut(s) 117, 216, 221
BcnI CCSGG 1 cut(s) 872
BcoDI GTCTC 1 cut(s) 899
BfaI CTAG 2 cut(s) 66, 386
BfmI CTRYAG 1 cut(s) 1230
BfuAI ACCTGC 2 cut(s) 1019, 1366
BglII AGATCT 1 cut(s) 832
BisI GCNGC 9 cut(s) 414, 468, 519, 624, 726, 819, 1131, 1344, 1389
BlsI GCNGC 9 cut(s) 415, 469, 520, 625, 727, 820, 1132, 1345, 1390
BmcAI AGTACT 1 cut(s) 1062
Bme1390I CCNGG 4 cut(s) 117, 216, 221, 872
Bme18I GGWCC 1 cut(s) 382
BmgT120I GGNCC 6 cut(s) 382, 525, 886, 925, 1431, 1432
BmiI GGNNCC 3 cut(s) 526, 1433, 1434
BmrFI CCNGG 4 cut(s) 117, 216, 221, 872
BmsI GCATC 4 cut(s) 39, 415, 1310, 1363
BpmI CTGGAG 1 cut(s) 1404
Bpu10I CCTNAGC 1 cut(s) 651
BpuMI CCSGG 1 cut(s) 872
BsaAI YACGTR 1 cut(s) 26
BsaHI GRCGYC 1 cut(s) 227
BsaJI CCNNGG 4 cut(s) 116, 188, 220, 691
Bsc4I CCNNNNNNNGG 3 cut(s) 221, 877, 1140
Bse118I RCCGGY 1 cut(s) 256
Bse1I ACTGG 2 cut(s) 434, 1387
Bse3DI GCAATG 2 cut(s) 513, 1391
BseBI CCWGG 3 cut(s) 117, 216, 221
BseDI CCNNGG 4 cut(s) 116, 188, 220, 691
BseGI GGATG 4 cut(s) 202, 328, 570, 1378
BseLI CCNNNNNNNGG 3 cut(s) 221, 877, 1140
BseMI GCAATG 2 cut(s) 513, 1391
BseMII CTCAG 1 cut(s) 642
BseNI ACTGG 2 cut(s) 434, 1387
BseRI GAGGAG 1 cut(s) 563
BseSI GKGCMC 1 cut(s) 1435
BseXI GCAGC 9 cut(s) 400, 479, 505, 610, 712, 805, 1117, 1330, 1400
BseYI CCCAGC 1 cut(s) 521
BsgI GTGCAG 1 cut(s) 894
BshFI GGCC 6 cut(s) 219, 527, 738, 887, 926, 1433
BsiHKAI GWGCWC 1 cut(s) 1108
BsiSI CCGG 3 cut(s) 257, 464, 872
BslFI GGGAC 2 cut(s) 238, 326
BslI CCNNNNNNNGG 3 cut(s) 221, 877, 1140
BsmAI GTCTC 1 cut(s) 899
BsmFI GGGAC 2 cut(s) 238, 326
BsnI GGCC 6 cut(s) 219, 527, 738, 887, 926, 1433
Bsp120I GGGCCC 1 cut(s) 1431
Bsp1286I GDGCHC 2 cut(s) 1108, 1435
Bsp143I GATC 5 cut(s) 72, 298, 796, 832, 1172
BspACI CCGC 3 cut(s) 212, 254, 609
BspANI GGCC 6 cut(s) 219, 527, 738, 887, 926, 1433
BspCNI CTCAG 1 cut(s) 643
BspLI GGNNCC 3 cut(s) 526, 1433, 1434
BspMAI CTGCAG 1 cut(s) 1234
BspMI ACCTGC 2 cut(s) 1019, 1366
BspPI GGATC 1 cut(s) 80
BspQI GCTCTTC 1 cut(s) 513
BsrDI GCAATG 2 cut(s) 513, 1391
BsrFI RCCGGY 1 cut(s) 256
BsrI ACTGG 2 cut(s) 434, 1387
BssAI RCCGGY 1 cut(s) 256
BssECI CCNNGG 4 cut(s) 116, 188, 220, 691
BssMI GATC 5 cut(s) 72, 298, 796, 832, 1172
BssNI GRCGYC 1 cut(s) 227
Bst2UI CCWGG 3 cut(s) 117, 216, 221
Bst4CI ACNGT 5 cut(s) 61, 200, 425, 978, 1440
Bst6I CTCTTC 2 cut(s) 513, 1399
BstACI GRCGYC 1 cut(s) 227
BstAPI GCANNNNNTGC 1 cut(s) 1352
BstBAI YACGTR 1 cut(s) 26
BstC8I GCNNGC 1 cut(s) 1353
BstDEI CTNAG 1 cut(s) 651
BstDSI CCRYGG 1 cut(s) 188
BstEII GGTNACC 3 cut(s) 194, 678, 1006
BstF5I GGATG 4 cut(s) 202, 328, 570, 1378
BstHHI GCGC 1 cut(s) 296
BstKTI GATC 5 cut(s) 75, 301, 799, 835, 1175
BstMAI GTCTC 1 cut(s) 899
BstMBI GATC 5 cut(s) 72, 298, 796, 832, 1172
BstMWI GCNNNNNNNGC 3 cut(s) 476, 524, 1352
BstNI CCWGG 3 cut(s) 117, 216, 221
BstPI GGTNACC 3 cut(s) 194, 678, 1006
BstSCI CCNGG 4 cut(s) 115, 214, 219, 870
BstSFI CTRYAG 1 cut(s) 1230
BstSLI GKGCMC 1 cut(s) 1435
BstSNI TACGTA 1 cut(s) 26
BstV1I GCAGC 9 cut(s) 400, 479, 505, 610, 712, 805, 1117, 1330, 1400
BstX2I RGATCY 1 cut(s) 832
BstXI CCANNNNNNTGG 1 cut(s) 1369
BstYI RGATCY 1 cut(s) 832
BsuRI GGCC 6 cut(s) 219, 527, 738, 887, 926, 1433
BtgI CCRYGG 1 cut(s) 188
BtgZI GCGATG 2 cut(s) 96, 108
BtsCI GGATG 4 cut(s) 202, 328, 570, 1378
BtsI GCAGTG 3 cut(s) 848, 1227, 1239
BtsIMutI CAGTG 4 cut(s) 848, 1227, 1239, 1436
BveI ACCTGC 2 cut(s) 1019, 1366
Cac8I GCNNGC 1 cut(s) 1353
CfoI GCGC 1 cut(s) 296
Cfr10I RCCGGY 1 cut(s) 256
Cfr13I GGNCC 6 cut(s) 382, 525, 886, 925, 1431, 1432
CseI GACGC 2 cut(s) 96, 235
Csp6I GTAC 2 cut(s) 23, 1061
CspCI CAANNNNNGTGG 2 cut(s) 525, 560
CviAII CATG 5 cut(s) 76, 137, 278, 1027, 1031
CviQI GTAC 2 cut(s) 23, 1061
DdeI CTNAG 1 cut(s) 651
DpnI GATC 5 cut(s) 74, 300, 798, 834, 1174
DpnII GATC 5 cut(s) 72, 298, 796, 832, 1172
Eam1104I CTCTTC 2 cut(s) 513, 1399
EarI CTCTTC 2 cut(s) 513, 1399
EciI GGCGGA 1 cut(s) 243
Eco105I TACGTA 1 cut(s) 26
Eco24I GRGCYC 1 cut(s) 1435
Eco47I GGWCC 1 cut(s) 382
Eco91I GGTNACC 3 cut(s) 194, 678, 1006
EcoO109I RGGNCCY 2 cut(s) 1431, 1432
EcoO65I GGTNACC 3 cut(s) 194, 678, 1006
EcoRII CCWGG 3 cut(s) 115, 214, 219
EcoT22I ATGCAT 2 cut(s) 279, 1032
EcoT38I GRGCYC 1 cut(s) 1435
FaeI CATG 5 cut(s) 79, 140, 281, 1030, 1034
FaqI GGGAC 2 cut(s) 238, 326
FatI CATG 5 cut(s) 75, 136, 277, 1026, 1030
FauNDI CATATG 1 cut(s) 720
FblI GTMKAC 1 cut(s) 952
Fnu4HI GCNGC 9 cut(s) 414, 468, 519, 624, 726, 819, 1131, 1344, 1389
FokI GGATG 4 cut(s) 189, 315, 577, 1385
FriOI GRGCYC 1 cut(s) 1435
Fsp4HI GCNGC 9 cut(s) 414, 468, 519, 624, 726, 819, 1131, 1344, 1389
FspBI CTAG 2 cut(s) 66, 386
GlaI GCGC 1 cut(s) 295
GluI GCNGC 9 cut(s) 414, 468, 519, 624, 726, 819, 1131, 1344, 1389
GsaI CCCAGC 1 cut(s) 525
GsuI CTGGAG 1 cut(s) 1404
HaeIII GGCC 6 cut(s) 219, 527, 738, 887, 926, 1433
HapII CCGG 3 cut(s) 257, 464, 872
HgaI GACGC 2 cut(s) 96, 235
HhaI GCGC 1 cut(s) 296
Hin1I GRCGYC 1 cut(s) 227
Hin1II CATG 5 cut(s) 79, 140, 281, 1030, 1034
Hin6I GCGC 1 cut(s) 294
HinP1I GCGC 1 cut(s) 294
HincII GTYRAC 1 cut(s) 953
HindII GTYRAC 1 cut(s) 953
HindIII AAGCTT 3 cut(s) 17, 84, 1349
HinfI GANTC 3 cut(s) 184, 687, 1079
HpaII CCGG 3 cut(s) 257, 464, 872
HphI GGTGA 6 cut(s) 188, 271, 293, 357, 437, 673
Hpy166II GTNNAC 2 cut(s) 953, 1240
Hpy188I TCNGA 5 cut(s) 82, 499, 692, 832, 1158
Hpy188III TCNNGA 1 cut(s) 159
Hpy8I GTNNAC 2 cut(s) 953, 1240
HpyCH4III ACNGT 5 cut(s) 61, 200, 425, 978, 1440
HpyCH4IV ACGT 1 cut(s) 25
HpyF10VI GCNNNNNNNGC 3 cut(s) 476, 524, 1352
HpyF3I CTNAG 1 cut(s) 651
HpySE526I ACGT 1 cut(s) 25
Hsp92I GRCGYC 1 cut(s) 227
Hsp92II CATG 5 cut(s) 79, 140, 281, 1030, 1034
HspAI GCGC 1 cut(s) 294
Kzo9I GATC 5 cut(s) 72, 298, 796, 832, 1172
LguI GCTCTTC 1 cut(s) 513
LmnI GCTCC 3 cut(s) 151, 805, 1385
Lsp1109I GCAGC 9 cut(s) 400, 479, 505, 610, 712, 805, 1117, 1330, 1400
LweI GCATC 4 cut(s) 39, 415, 1310, 1363
MaeI CTAG 2 cut(s) 66, 386
MaeII ACGT 1 cut(s) 25
MaeIII GTNAC 6 cut(s) 194, 388, 425, 678, 991, 1006
MalI GATC 5 cut(s) 74, 300, 798, 834, 1174
MboI GATC 5 cut(s) 72, 298, 796, 832, 1172
MboII GAAGA 3 cut(s) 500, 601, 1416
MfeI CAATTG 1 cut(s) 1397
MflI RGATCY 1 cut(s) 832
MhlI GDGCHC 2 cut(s) 1108, 1435
Mph1103I ATGCAT 2 cut(s) 279, 1032
MroXI GAANNNNTTC 1 cut(s) 1256
MseI TTAA 5 cut(s) 38, 420, 558, 1002, 1422
MslI CAYNNNNRTG 1 cut(s) 1232
MspA1I CMGCKG 2 cut(s) 470, 1048
MspI CCGG 3 cut(s) 257, 464, 872
MspR9I CCNGG 4 cut(s) 117, 216, 221, 872
MunI CAATTG 1 cut(s) 1397
MvaI CCWGG 3 cut(s) 117, 216, 221
MwoI GCNNNNNNNGC 3 cut(s) 476, 524, 1352
NciI CCSGG 1 cut(s) 872
NdeI CATATG 1 cut(s) 720
NdeII GATC 5 cut(s) 72, 298, 796, 832, 1172
NlaIII CATG 5 cut(s) 79, 140, 281, 1030, 1034
NlaIV GGNNCC 3 cut(s) 526, 1433, 1434
NmuCI GTSAC 2 cut(s) 194, 425
NsiI ATGCAT 2 cut(s) 279, 1032
OliI CACNNNNGTG 1 cut(s) 1232
PaqCI CACCTGC 1 cut(s) 1366
PciSI GCTCTTC 1 cut(s) 513
PcsI WCGNNNNNNNCGW 1 cut(s) 196
PdmI GAANNNNTTC 1 cut(s) 1256
PfeI GAWTC 3 cut(s) 184, 687, 1079
PkrI GCNGC 9 cut(s) 415, 469, 520, 625, 727, 820, 1132, 1345, 1390
Ppu21I YACGTR 1 cut(s) 26
PsiI TTATAA 1 cut(s) 1308
Psp6I CCWGG 3 cut(s) 115, 214, 219
PspEI GGTNACC 3 cut(s) 194, 678, 1006
PspFI CCCAGC 1 cut(s) 521
PspGI CCWGG 3 cut(s) 115, 214, 219
PspN4I GGNNCC 3 cut(s) 526, 1433, 1434
PspOMI GGGCCC 1 cut(s) 1431
PspPI GGNCC 6 cut(s) 382, 525, 886, 925, 1431, 1432
PsrI GAACNNNNNNTAC 2 cut(s) 688, 720
PstI CTGCAG 1 cut(s) 1234
PsuI RGATCY 1 cut(s) 832
PvuII CAGCTG 2 cut(s) 470, 1048
RsaI GTAC 2 cut(s) 24, 1062
RsaNI GTAC 2 cut(s) 23, 1061
RseI CAYNNNNRTG 1 cut(s) 1232
SalI GTCGAC 1 cut(s) 951
SapI GCTCTTC 1 cut(s) 513
SaqAI TTAA 5 cut(s) 38, 420, 558, 1002, 1422
SatI GCNGC 9 cut(s) 414, 468, 519, 624, 726, 819, 1131, 1344, 1389
Sau3AI GATC 5 cut(s) 72, 298, 796, 832, 1172
Sau96I GGNCC 6 cut(s) 382, 525, 886, 925, 1431, 1432
ScaI AGTACT 1 cut(s) 1062
ScrFI CCNGG 4 cut(s) 117, 216, 221, 872
SduI GDGCHC 2 cut(s) 1108, 1435
SfaNI GCATC 4 cut(s) 39, 415, 1310, 1363
SfcI CTRYAG 1 cut(s) 1230
SgrAI CRCCGGYG 1 cut(s) 256
SinI GGWCC 1 cut(s) 382
SmiMI CAYNNNNRTG 1 cut(s) 1232
SnaBI TACGTA 1 cut(s) 26
SsiI CCGC 3 cut(s) 212, 254, 609
SspI AATATT 1 cut(s) 1000
SspMI CTAG 2 cut(s) 66, 386
StyD4I CCNGG 4 cut(s) 115, 214, 219, 870
TaaI ACNGT 5 cut(s) 61, 200, 425, 978, 1440
TaiI ACGT 1 cut(s) 28
TaqI TCGA 5 cut(s) 582, 952, 963, 1102, 1213
TatI WGTACW 1 cut(s) 1060
TfiI GAWTC 3 cut(s) 184, 687, 1079
Tru1I TTAA 5 cut(s) 38, 420, 558, 1002, 1422
Tru9I TTAA 5 cut(s) 38, 420, 558, 1002, 1422
TscAI CASTG 4 cut(s) 855, 1234, 1239, 1443
TseFI GTSAC 2 cut(s) 194, 425
TseI GCWGC 9 cut(s) 413, 467, 518, 623, 725, 818, 1130, 1343, 1388
Tsp45I GTSAC 2 cut(s) 194, 425
TspGWI ACGGA 2 cut(s) 110, 395
TspRI CASTG 4 cut(s) 855, 1234, 1239, 1443
VpaK11BI GGWCC 1 cut(s) 382
XapI RAATTY 4 cut(s) 142, 355, 445, 966
XmiI GTMKAC 1 cut(s) 952
XmnI GAANNNNTTC 1 cut(s) 1256
XspI CTAG 2 cut(s) 66, 386
ZrmI AGTACT 1 cut(s) 1062
Zsp2I ATGCAT 2 cut(s) 279, 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.